mRNA_P-canaliculata_contig98460.23950.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig98460.23950.1
Unique NamemRNA_P-canaliculata_contig98460.23950.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Match: UPI000410116D (outer membrane-stress sensor serine endopeptidase DegS n=2 Tax=unclassified Psychromonas TaxID=2614957 RepID=UPI000410116D)

HSP 1 Score: 462 bits (1190), Expect = 4.920e-162
Identity = 240/277 (86.64%), Postives = 257/277 (92.78%), Query Frame = 1
Query:    1 MKLKKFSDYLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHLPAIMSYSDAVKKSAPSVVNIYSQQYIDSSVSSKQQLQPTGLGSGIILEAKGYILTNYHVISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYAPEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESIIKDGRVIRGSLGIEAENLDPLAARLWGL 831
            MKLK  S+YLIKPIL GLL+A +IIY PIIF+  +  + + P ++SYSDAVKKSAPSVVNIYSQQYIDSSV SKQQLQPTGLGSGIIL++KGYILTNYHVIS+ADQILIALQDGRLFTA IIGSDIITDL VLQIDGEDLPVMPQNP+Y PEIGD+VLAIGNPYNLGQTITQGVISA GRSGMS+TGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTG SNVTYGISFAIPYRLV HVM+SIIK+GRVIRGSLGIEAENLDPL ARLWGL
Sbjct:    1 MKLKLCSNYLIKPILCGLLLAGIIIYSPIIFKSLSNNSSYQPEVISYSDAVKKSAPSVVNIYSQQYIDSSVGSKQQLQPTGLGSGIILDSKGYILTNYHVISKADQILIALQDGRLFTATIIGSDIITDLAVLQIDGEDLPVMPQNPDYDPEIGDLVLAIGNPYNLGQTITQGVISALGRSGMSSTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGTSNVTYGISFAIPYRLVTHVMKSIIKNGRVIRGSLGIEAENLDPLVARLWGL 277          
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Match: A0A366VZA7_9GAMM (Outer membrane-stress sensor serine endopeptidase DegS n=1 Tax=Psychromonas sp. B3M02 TaxID=2267226 RepID=A0A366VZA7_9GAMM)

HSP 1 Score: 461 bits (1186), Expect = 2.000e-161
Identity = 236/277 (85.20%), Postives = 253/277 (91.34%), Query Frame = 1
Query:    1 MKLKKFSDYLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHLPAIMSYSDAVKKSAPSVVNIYSQQYIDSSVSSKQQLQPTGLGSGIILEAKGYILTNYHVISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYAPEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESIIKDGRVIRGSLGIEAENLDPLAARLWGL 831
            MKLK FS+YL+KPILWGL +A +IIY P I + FT     LP I+SYSDAVKKSAPSVVNIYSQQYIDSS+ +KQQLQPTGLGSGIIL+A GYILTN+HVI++ADQILIALQDGRLFTANIIGSD+ITDL VLQIDGEDLPVMPQN +Y PEIGD+VLAIGNPYNLGQTITQGVISATGR GMS+TGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRL   VM+ IIKDGRVIRGSLGIEAENLDPL ARLWGL
Sbjct:    1 MKLKHFSNYLVKPILWGLFLAAVIIYSPTILKHFTNNEVQLPDIISYSDAVKKSAPSVVNIYSQQYIDSSLGTKQQLQPTGLGSGIILDAGGYILTNHHVIAQADQILIALQDGRLFTANIIGSDVITDLAVLQIDGEDLPVMPQNADYTPEIGDLVLAIGNPYNLGQTITQGVISATGRGGMSSTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLASRVMQGIIKDGRVIRGSLGIEAENLDPLVARLWGL 277          
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Match: A0A4Y7ZYK3_9GAMM (Outer membrane-stress sensor serine endopeptidase DegS n=1 Tax=Psychromonas sp. RZ22 TaxID=2555643 RepID=A0A4Y7ZYK3_9GAMM)

HSP 1 Score: 453 bits (1166), Expect = 2.210e-158
Identity = 229/277 (82.67%), Postives = 254/277 (91.70%), Query Frame = 1
Query:    1 MKLKKFSDYLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHLPAIMSYSDAVKKSAPSVVNIYSQQYIDSSVSSKQQLQPTGLGSGIILEAKGYILTNYHVISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYAPEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESIIKDGRVIRGSLGIEAENLDPLAARLWGL 831
            MKLK F +YLIKP LWGL +A + IY PI+++  T K+ +LPAI+SYSDAVKKSAPSVVNIYSQQYI+SSV +KQQLQPTGLGSGIIL+A GYILTNYHVIS+AD+ILIALQDGRLFTANIIGSD ITDL VLQIDG++LPVMPQNPNY PEIGD+VLAIGNPYNLGQTITQGVISATGR+GMS TGRQDFIQTDAAINEGNSGGAL+NSRGELVGINTSEF  G+  +TYGISFAIPY+L RHVM+S+I+DGRVIRGSLGIEAENLDPL ARLWGL
Sbjct:    1 MKLKYFLNYLIKPTLWGLALAAIFIYSPIVYKNLTNKSAYLPAIISYSDAVKKSAPSVVNIYSQQYINSSVGAKQQLQPTGLGSGIILDAHGYILTNYHVISQADKILIALQDGRLFTANIIGSDEITDLAVLQIDGKNLPVMPQNPNYVPEIGDLVLAIGNPYNLGQTITQGVISATGRNGMSATGRQDFIQTDAAINEGNSGGALVNSRGELVGINTSEFNAGDHKITYGISFAIPYQLARHVMQSLIRDGRVIRGSLGIEAENLDPLLARLWGL 277          
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Match: A0A4Y7ZKR3_9GAMM (Outer membrane-stress sensor serine endopeptidase DegS n=1 Tax=Psychromonas sp. RZ5 TaxID=2555642 RepID=A0A4Y7ZKR3_9GAMM)

HSP 1 Score: 443 bits (1139), Expect = 2.830e-154
Identity = 222/277 (80.14%), Postives = 250/277 (90.25%), Query Frame = 1
Query:    1 MKLKKFSDYLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHLPAIMSYSDAVKKSAPSVVNIYSQQYIDSSVSSKQQLQPTGLGSGIILEAKGYILTNYHVISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYAPEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESIIKDGRVIRGSLGIEAENLDPLAARLWGL 831
            MKLK + +YL+KPILWG+L+  + I  P I++  T KT +LPAI+SYS+AVKKSAP+VVNIYSQQYIDSSV +KQQLQPTGLGSGIIL+ +G+ILTNYHVIS+ADQILIALQDGRLFTA ++GSD ITDLTVL IDGEDLPV+PQNPNY PE+GD VLAIGNPYNLGQTITQG+ISATGR G+S TGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEF+TG  NVTYGISFAIPY+L  HVM+S+IK GRVIRGSLGI+AENLDPL ARLWGL
Sbjct:    1 MKLKNYFNYLMKPILWGILLGAIFILTPKIYKSATDKTSYLPAIISYSEAVKKSAPAVVNIYSQQYIDSSVGTKQQLQPTGLGSGIILDKRGFILTNYHVISQADQILIALQDGRLFTATVVGSDQITDLTVLHIDGEDLPVIPQNPNYTPEVGDAVLAIGNPYNLGQTITQGIISATGRGGLSATGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFHTGAQNVTYGISFAIPYQLANHVMQSLIKYGRVIRGSLGIQAENLDPLLARLWGL 277          
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Match: A0A7W3X951_9GAMM (Outer membrane-stress sensor serine endopeptidase DegS n=2 Tax=unclassified Psychromonas TaxID=2614957 RepID=A0A7W3X951_9GAMM)

HSP 1 Score: 439 bits (1128), Expect = 1.330e-152
Identity = 222/277 (80.14%), Postives = 251/277 (90.61%), Query Frame = 1
Query:    1 MKLKKFSDYLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHLPAIMSYSDAVKKSAPSVVNIYSQQYIDSSVSSKQQLQPTGLGSGIILEAKGYILTNYHVISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYAPEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESIIKDGRVIRGSLGIEAENLDPLAARLWGL 831
            MKL ++ +YL+KP+LWGL +A LIIYGP I++       + PA++SYSDAVK++APSVVNIYSQQYIDSSV SKQQLQPTGLGSGIIL+ +GYI+TN+HVISEADQILIALQDGRLFTAN+IGSD+ITDL VLQI+  +LPV+PQN +Y  EIGD+VLAIGNPYNLGQTITQGVISATGRSGMS+TGRQDFIQTDAAINEGNSGGALINS GELVGINTSEFYTG  NVTYGISFAIPYRLV+ VM+S+I+DGRVIRGSLGIEAENLDPL ARLWGL
Sbjct:    1 MKLIQYVNYLVKPVLWGLFLAALIIYGPKIYKSLENDRSYKPALISYSDAVKRAAPSVVNIYSQQYIDSSVGSKQQLQPTGLGSGIILDKRGYIVTNHHVISEADQILIALQDGRLFTANVIGSDVITDLAVLQIEANNLPVIPQNSDYIAEIGDLVLAIGNPYNLGQTITQGVISATGRSGMSSTGRQDFIQTDAAINEGNSGGALINSYGELVGINTSEFYTGTRNVTYGISFAIPYRLVKFVMQSLIQDGRVIRGSLGIEAENLDPLLARLWGL 277          
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Match: A0A2N0WWC9_9GAMM (Outer membrane-stress sensor serine endopeptidase DegS n=1 Tax=Psychromonas sp. psych-6C06 TaxID=2058089 RepID=A0A2N0WWC9_9GAMM)

HSP 1 Score: 395 bits (1016), Expect = 2.010e-135
Identity = 195/277 (70.40%), Postives = 240/277 (86.64%), Query Frame = 1
Query:    1 MKLKKFSDYLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHLPAIMSYSDAVKKSAPSVVNIYSQQYIDSSVSSKQQLQPTGLGSGIILEAKGYILTNYHVISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYAPEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESIIKDGRVIRGSLGIEAENLDPLAARLWGL 831
            M  K    Y +KPI WG++IA++++YG        +  D+   + SYSDAVKK++P+VVNIYSQQYIDS + +KQ LQPTGLGSGII++ KGYILTN+HV+S+ADQILIALQDGRLF+A ++GSD+ITDL VLQI+G +LPV+PQNP+Y P++GD+VLAIGNPYNLGQTITQG+ISATGR+GMS++GRQDF+QTDAAINEGNSGGALINSRGELVGINTSEFYT + N++ GISFAIPY+L + +MES+I+DGRVIRGSLG+ AENLDPL ARLWGL
Sbjct:    1 MNFKTQLFYFLKPIFWGIIIALVVLYGANFVNVVGKFFDN-NQVASYSDAVKKASPAVVNIYSQQYIDSGIDNKQHLQPTGLGSGIIVDNKGYILTNFHVVSQADQILIALQDGRLFSAKVVGSDLITDLAVLQIEGNNLPVIPQNPSYIPQVGDIVLAIGNPYNLGQTITQGIISATGRNGMSSSGRQDFLQTDAAINEGNSGGALINSRGELVGINTSEFYTNSQNISNGISFAIPYQLSQRIMESLIRDGRVIRGSLGLVAENLDPLLARLWGL 276          
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Match: A0A2N1DJZ4_9GAMM (Outer membrane-stress sensor serine endopeptidase DegS n=2 Tax=Psychromonas TaxID=67572 RepID=A0A2N1DJZ4_9GAMM)

HSP 1 Score: 389 bits (1000), Expect = 5.050e-133
Identity = 196/270 (72.59%), Postives = 235/270 (87.04%), Query Frame = 1
Query:   25 YLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHLPAIMSYSDAVKKSAPSVVNIYSQQYIDSSVSS-KQQLQPTGLGSGIILEAKGYILTNYHVISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYAPEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESIIKDGRVIRGSLGIEAENLDPLAARLWGL 831
            Y +KPI WG++IA LI+YG  +    T +      + SYS++VKK++P+VVNIYSQ+Y+DS+ ++ KQQLQPTGLGSGII++ +GYILTNYHVI +ADQILIALQDGRLFTA ++GSD ITDL VLQI+G +LPV+PQN  Y P++GD+VLAIGNPYNLGQTITQGVISATGRSGMS++GRQDF+QTDAAINEGNSGGALINSRGELVGINTSEFY+ N N++YGISFAIPY+L + +M S+IKDGRVIRGSLGI AENLDPL ARLWGL
Sbjct:    9 YFLKPIFWGIIIATLIVYGVRLGTALTSRLAD-DKVASYSESVKKASPAVVNIYSQRYVDSTFNNNKQQLQPTGLGSGIIVDEEGYILTNYHVIKQADQILIALQDGRLFTATVVGSDAITDLAVLQIEGNNLPVIPQNSQYNPQVGDIVLAIGNPYNLGQTITQGVISATGRSGMSSSGRQDFLQTDAAINEGNSGGALINSRGELVGINTSEFYSRNQNISYGISFAIPYQLSQRIMNSLIKDGRVIRGSLGIVAENLDPLLARLWGL 277          
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Match: A0A2N1A1H4_9GAMM (Outer membrane-stress sensor serine endopeptidase DegS n=1 Tax=Psychromonas sp. Urea-02u-13 TaxID=2058326 RepID=A0A2N1A1H4_9GAMM)

HSP 1 Score: 388 bits (997), Expect = 1.180e-132
Identity = 195/280 (69.64%), Postives = 238/280 (85.00%), Query Frame = 1
Query:    1 MKLKKFSDYLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHL---PAIMSYSDAVKKSAPSVVNIYSQQYIDSSVSSKQQLQPTGLGSGIILEAKGYILTNYHVISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYAPEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESIIKDGRVIRGSLGIEAENLDPLAARLWGL 831
            M  K    Y IKPI WG++IA++++YG     KF     +L     + SYS+AVKK++P+VVNIYSQQY+DSS+ +KQ LQPTGLGSGII++ KGYILTN+HV+++ADQILIALQDGRLF+A ++GSD ITDL VLQI+G +LPV+PQN +Y P +GD+VLAIGNPYNLGQTITQG+ISATGR+GMS++GRQDF+QTDAAINEGNSGGALINSRGELVGINTSEFYT   N++ GISFAIPY+L + +M+S+IKDGRVIRGSLG+ AENLDPL ARLWGL
Sbjct:    1 MNFKAKFFYFIKPIFWGVIIAIVVMYG----TKFVHTLGNLLNNNQVSSYSEAVKKASPAVVNIYSQQYVDSSIDNKQHLQPTGLGSGIIVDKKGYILTNFHVVAQADQILIALQDGRLFSAKVVGSDAITDLAVLQIEGNNLPVIPQNLDYIPRVGDIVLAIGNPYNLGQTITQGIISATGRNGMSSSGRQDFLQTDAAINEGNSGGALINSRGELVGINTSEFYTTTQNLSTGISFAIPYQLSQRIMKSLIKDGRVIRGSLGLVAENLDPLLARLWGL 276          
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Match: UPI0003B7A11F (outer membrane-stress sensor serine endopeptidase DegS n=1 Tax=Psychromonas hadalis TaxID=211669 RepID=UPI0003B7A11F)

HSP 1 Score: 386 bits (992), Expect = 6.100e-132
Identity = 188/277 (67.87%), Postives = 236/277 (85.20%), Query Frame = 1
Query:    1 MKLKKFSDYLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHLPAIMSYSDAVKKSAPSVVNIYSQQYIDSSVSSKQQLQPTGLGSGIILEAKGYILTNYHVISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYAPEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESIIKDGRVIRGSLGIEAENLDPLAARLWGL 831
            M  K    Y  KPI WGL+IA++++YG  +        ++ P + SYS+A+KK++P+VVNIYSQQY+DSS+ +KQ LQPTGLGSGII++ KGYILTN+HV+++ADQILIALQDGRLF+A+++GSD+I+DL +LQI+G +LPV+PQN +Y P++GD+V AIGNPYN+GQTITQG+ISATGRSGMS  GRQDF+QTDAAINEGNSGGALINSRGELVGINTSEFY  + N++ GISFAIPY+L + +M S+IKDGRVIRGSLG+ AENLDPL ARLWGL
Sbjct:    1 MNFKTRFFYFFKPIFWGLIIALVVLYGTKLVNNIDNLFNNKP-VASYSEAIKKASPAVVNIYSQQYVDSSIDNKQHLQPTGLGSGIIIDKKGYILTNFHVVAQADQILIALQDGRLFSASVVGSDVISDLALLQIEGNNLPVIPQNADYIPQVGDIVFAIGNPYNIGQTITQGIISATGRSGMSNLGRQDFLQTDAAINEGNSGGALINSRGELVGINTSEFYATSKNISSGISFAIPYQLSQRIMHSLIKDGRVIRGSLGLVAENLDPLFARLWGL 276          
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Match: UPI001EE994B2 (outer membrane-stress sensor serine endopeptidase DegS n=1 Tax=Psychromonas antarctica TaxID=67573 RepID=UPI001EE994B2)

HSP 1 Score: 386 bits (992), Expect = 7.750e-132
Identity = 197/280 (70.36%), Postives = 233/280 (83.21%), Query Frame = 1
Query:    1 MKLKKFSDYLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHLPA---IMSYSDAVKKSAPSVVNIYSQQYIDSSVSSKQQLQPTGLGSGIILEAKGYILTNYHVISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYAPEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINEGNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESIIKDGRVIRGSLGIEAENLDPLAARLWGL 831
            M  K    Y  KPI WGL+IA+ IIYG     K      HL     + SYS AVKK++P+VVNIYSQQYIDSS+ +KQ LQPTGLGSGII+++KGY+LTN+HVIS ADQILIALQDGR FTA+++GSDI+TDL VL+I G +LPV+PQN NY P++GD+VLAIGNPYNLGQT+TQG+ISATGR+GMS++GRQDF+QTDAAINEGNSGGALINSRGELVGINTSEFY+ N N + GISFAIPY+L + +M+S+I  GRVIRGSLGI AENLDPL ARLWGL
Sbjct:    1 MNFKTSFLYFFKPIFWGLIIALFIIYG----SKLGVNLTHLSGDDNVSSYSIAVKKASPAVVNIYSQQYIDSSIDNKQHLQPTGLGSGIIIDSKGYVLTNFHVISSADQILIALQDGRFFTASVVGSDIVTDLAVLKISGANLPVIPQNTNYQPQVGDIVLAIGNPYNLGQTVTQGIISATGRNGMSSSGRQDFLQTDAAINEGNSGGALINSRGELVGINTSEFYSNNQNSSSGISFAIPYQLSQRIMKSLIMHGRVIRGSLGIIAENLDPLIARLWGL 276          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98460.23950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000410116D4.920e-16286.64outer membrane-stress sensor serine endopeptidase ... [more]
A0A366VZA7_9GAMM2.000e-16185.20Outer membrane-stress sensor serine endopeptidase ... [more]
A0A4Y7ZYK3_9GAMM2.210e-15882.67Outer membrane-stress sensor serine endopeptidase ... [more]
A0A4Y7ZKR3_9GAMM2.830e-15480.14Outer membrane-stress sensor serine endopeptidase ... [more]
A0A7W3X951_9GAMM1.330e-15280.14Outer membrane-stress sensor serine endopeptidase ... [more]
A0A2N0WWC9_9GAMM2.010e-13570.40Outer membrane-stress sensor serine endopeptidase ... [more]
A0A2N1DJZ4_9GAMM5.050e-13372.59Outer membrane-stress sensor serine endopeptidase ... [more]
A0A2N1A1H4_9GAMM1.180e-13269.64Outer membrane-stress sensor serine endopeptidase ... [more]
UPI0003B7A11F6.100e-13267.87outer membrane-stress sensor serine endopeptidase ... [more]
UPI001EE994B27.750e-13270.36outer membrane-stress sensor serine endopeptidase ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98460contigP-canaliculata_contig98460:2..832 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score394.4
Seed ortholog evalue4.3e-107
Seed eggNOG ortholog357804.Ping_2880
Preferred namedegS
KEGG koko:K04691,ko:K04771,ko:K04772
KEGG Pathwayko01503,ko02020,map01503,map02020
KEGG ModuleM00728
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0051788,GO:0061077,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.Trypsin-like peptidase domain
EggNOG OGs1MU63@1224,1RN9T@1236,2QH8X@267894,COG0265@1,COG0265@2
EC3.4.21.107
COG Functional cat.O
Best tax levelPsychromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03110
Hectar predicted targeting categorysignal anchor
Exons1
Model size831
Cds size831
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817345.7507842-CDS-P-canaliculata_contig98460:1..8321622817345.7507842-CDS-P-canaliculata_contig98460:1..832Pelvetia canaliculata dioeciousCDSP-canaliculata_contig98460 2..832 -
1693495237.0394418-CDS-P-canaliculata_contig98460:1..8321693495237.0394418-CDS-P-canaliculata_contig98460:1..832Pelvetia canaliculata dioeciousCDSP-canaliculata_contig98460 2..832 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98460.23950.1prot_P-canaliculata_contig98460.23950.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig98460 2..832 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig98460.23950.1

>prot_P-canaliculata_contig98460.23950.1 ID=prot_P-canaliculata_contig98460.23950.1|Name=mRNA_P-canaliculata_contig98460.23950.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=277bp
MKLKKFSDYLIKPILWGLLIAVLIIYGPIIFEKFTRKTDHLPAIMSYSDA
VKKSAPSVVNIYSQQYIDSSVSSKQQLQPTGLGSGIILEAKGYILTNYHV
ISEADQILIALQDGRLFTANIIGSDIITDLTVLQIDGEDLPVMPQNPNYA
PEIGDVVLAIGNPYNLGQTITQGVISATGRSGMSTTGRQDFIQTDAAINE
GNSGGALINSRGELVGINTSEFYTGNSNVTYGISFAIPYRLVRHVMESII
KDGRVIRGSLGIEAENLDPLAARLWGL
back to top

mRNA from alignment at P-canaliculata_contig98460:2..832-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig98460.23950.1 ID=mRNA_P-canaliculata_contig98460.23950.1|Name=mRNA_P-canaliculata_contig98460.23950.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=831bp|location=Sequence derived from alignment at P-canaliculata_contig98460:2..832- (Pelvetia canaliculata dioecious)
ATGAAGCTAAAAAAATTTTCAGATTATCTAATTAAGCCAATTCTGTGGGG GTTACTTATTGCCGTCTTAATTATCTATGGCCCAATAATATTTGAAAAAT TTACTCGCAAAACTGATCATTTACCTGCCATCATGAGTTACTCCGATGCA GTAAAAAAATCTGCACCATCTGTCGTCAATATATATTCGCAACAATACAT TGATTCTAGCGTCAGCAGCAAACAACAATTGCAACCGACAGGATTAGGCT CAGGCATTATTCTTGAGGCAAAAGGCTATATTTTAACTAACTACCATGTT ATTTCTGAAGCGGATCAAATCTTAATTGCCCTGCAAGATGGACGCTTATT TACGGCAAATATTATTGGCAGTGACATCATTACCGATCTGACTGTGTTAC AAATAGATGGTGAAGATCTTCCTGTTATGCCACAAAACCCGAATTATGCG CCTGAAATAGGTGATGTTGTTTTAGCAATAGGTAATCCATACAATCTTGG TCAAACCATAACACAGGGCGTCATTAGTGCGACAGGGCGCAGTGGCATGA GCACCACGGGACGACAAGACTTTATCCAAACAGATGCAGCCATTAATGAA GGTAACTCTGGAGGCGCTTTAATTAATAGTCGTGGCGAGTTAGTGGGGAT TAATACTTCTGAATTTTATACAGGTAATAGCAATGTTACTTACGGTATTA GCTTTGCCATCCCTTACCGACTAGTACGACATGTCATGGAAAGTATTATA AAAGATGGCCGTGTAATCCGAGGCTCATTAGGTATTGAAGCTGAAAATTT AGACCCATTAGCTGCTCGCTTATGGGGACTA
back to top

Coding sequence (CDS) from alignment at P-canaliculata_contig98460:2..832-

>mRNA_P-canaliculata_contig98460.23950.1 ID=mRNA_P-canaliculata_contig98460.23950.1|Name=mRNA_P-canaliculata_contig98460.23950.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1662bp|location=Sequence derived from alignment at P-canaliculata_contig98460:2..832- (Pelvetia canaliculata dioecious)
ATGAAGCTAAAAAAATTTTCAGATTATCTAATTAAGCCAATTCTGTGGGG
GTTACTTATTGCCGTCTTAATTATCTATGGCCCAATAATATTTGAAAAAT
TTACTCGCAAAACTGATCATTTACCTGCCATCATGAGTTACTCCGATGCA
GTAAAAAAATCTGCACCATCTGTCGTCAATATATATTCGCAACAATACAT
TGATTCTAGCGTCAGCAGCAAACAACAATTGCAACCGACAGGATTAGGCT
CAGGCATTATTCTTGAGGCAAAAGGCTATATTTTAACTAACTACCATGTT
ATTTCTGAAGCGGATCAAATCTTAATTGCCCTGCAAGATGGACGCTTATT
TACGGCAAATATTATTGGCAGTGACATCATTACCGATCTGACTGTGTTAC
AAATAGATGGTGAAGATCTTCCTGTTATGCCACAAAACCCGAATTATGCG
CCTGAAATAGGTGATGTTGTTTTAGCAATAGGTAATCCATACAATCTTGG
TCAAACCATAACACAGGGCGTCATTAGTGCGACAGGGCGCAGTGGCATGA
GCACCACGGGACGACAAGACTTTATCCAAACAGATGCAGCCATTAATGAA
GGTAACTCTGGAGGCGCTTTAATTAATAGTCGTGGCGAGTTAGTGGGGAT
TAATACTTCTGAATTTTATACAGGTAATAGCAATGTTACTTACGGTATTA
GCTTTGCCATCCCTTACCGACTAGTACGACATGTCATGGAAAGTATTATA
AAAGATGGCCGTGTAATCCGAGGCTCATTAGGTATTGAAGCTGAAAATTT
AGACCCATTAGCTGCTCGCTTATGGGGACTAATGAAGCTAAAAAAATTTT
CAGATTATCTAATTAAGCCAATTCTGTGGGGGTTACTTATTGCCGTCTTA
ATTATCTATGGCCCAATAATATTTGAAAAATTTACTCGCAAAACTGATCA
TTTACCTGCCATCATGAGTTACTCCGATGCAGTAAAAAAATCTGCACCAT
CTGTCGTCAATATATATTCGCAACAATACATTGATTCTAGCGTCAGCAGC
AAACAACAATTGCAACCGACAGGATTAGGCTCAGGCATTATTCTTGAGGC
AAAAGGCTATATTTTAACTAACTACCATGTTATTTCTGAAGCGGATCAAA
TCTTAATTGCCCTGCAAGATGGACGCTTATTTACGGCAAATATTATTGGC
AGTGACATCATTACCGATCTGACTGTGTTACAAATAGATGGTGAAGATCT
TCCTGTTATGCCACAAAACCCGAATTATGCGCCTGAAATAGGTGATGTTG
TTTTAGCAATAGGTAATCCATACAATCTTGGTCAAACCATAACACAGGGC
GTCATTAGTGCGACAGGGCGCAGTGGCATGAGCACCACGGGACGACAAGA
CTTTATCCAAACAGATGCAGCCATTAATGAAGGTAACTCTGGAGGCGCTT
TAATTAATAGTCGTGGCGAGTTAGTGGGGATTAATACTTCTGAATTTTAT
ACAGGTAATAGCAATGTTACTTACGGTATTAGCTTTGCCATCCCTTACCG
ACTAGTACGACATGTCATGGAAAGTATTATAAAAGATGGCCGTGTAATCC
GAGGCTCATTAGGTATTGAAGCTGAAAATTTAGACCCATTAGCTGCTCGC
TTATGGGGACTA
back to top