mRNA_P-canaliculata_contig9818.23918.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Match: A0A6H5KNZ1_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNZ1_9PHAE) HSP 1 Score: 944 bits (2440), Expect = 0.000e+0 Identity = 514/694 (74.06%), Postives = 596/694 (85.88%), Query Frame = 1
Query: 1 RYGGSPAGHRGGQGASRKRREMKAVVAKQVQIAAGPVSVRDLAVAMSKKVREVTKMLRQMGETNVSPEFMVDPDTAELVALEFGLRTKRLKLRNGDLGRTVVTKESFDSLAPRPAVVSVMGHVDHGKTTLLDALRTSK--VAGTESAGITQKIGAFSVDVNDSSVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKSQTIEVLQLLNEFPNLAPVVA---IDRYGVDAEKAVDTISRQLLEHNVITEGYGGQVPVVPVSAVTREGFDNLLDTLMLQAEILELRADDKAPAEGVVVDSSMVKGKGGVADVLISWGKLKLGDVVVAGMEYGKVRSLSDSHGARLKEAGAAEPVRVVGMKGLPRMGDEVLVVESEAKAKAIVAQRRKQEELKQLEKQEETLGLKRVSEDAIKRLKAEAQQAIRRREAALFHAREAVRTMKSRRDESSAXXXXXXEAIAAKAMEKAEEAVRKAKMQEEEVDVGPTKFYAIFKAEGFGQLEAMSQVMNDVPQEEVELSLVRTGLGSVTQSDVEAAALAGAPIFAFNVGPVPPDVKATAQGEGVQIHNHDVIYRFLDGVKAVMSELLPPEKKETVIGEGKTLEVFEASGRNKESVRVAGLTVSSGKLTREHLFRVVRGEEILADGLRASSMRRFKDKVSEVTKDKECGVALEGFNDFEEGDIVQCYILDEMKRSL 2067
RYGGS A HRG QGASRK+ ++K VV K+VQI A V+VR+LAVAMSKK REV MLRQMGE+NVSP FMV+PD A+++A EFGLRTK LKLR+ +LGRT VT+E+FDSL PRP VVSVMGHVDHGKTTLLDALRTSK VAGTE+AGITQKIGAFSV+V DSSVTFFDTPGHAAFKSMRH+TSRLTDIV+VVIAADDGVKSQT+EV LL EFPNLAPVVA ID+Y VD EKAVD ISRQLLEH++ TEGYGG+VP+VPVSAVTREGFD+LL+TL+LQAE+LELRAD+KA AEG+VVDS++VKG+GGVADVL++WGKLK DVVVAG EYGKVR L S G R+KEAGAAEPVR+VGMKGLP+MGDEV+VV SE++A+A+VAQR KQ+E+K+LEKQ E LG KR+SE A KRLK A AIRRRE AL+ AREA R MKSRRDESS E AA+AM AEEA+R+++ Q+E+ D GPTK +AIFKAEGFG LEAMSQVM +VPQ+EVELSL++TGLGSVTQSDVEAAALA A IF FNVG VP DVKA AQ EGVQIH+HDVIYRFLD VKAVMS LLPP +ETVIGE KTL+VFE +G+NKE+V VAGL VSSGKL+R H FRV+R +E++AD +A+SMRR KD+V+EVTKDKECGVALE F+ F+EGD+VQCY L+E+KR+L
Sbjct: 334 RYGGSHAAHRGSQGASRKKNDVK-VVPKEVQIPAVAVTVRELAVAMSKKAREVVFMLRQMGESNVSPSFMVEPDIAQMLAKEFGLRTKLLKLRDSELGRTRVTEETFDSLEPRPPVVSVMGHVDHGKTTLLDALRTSKAKVAGTEAAGITQKIGAFSVEVKDSSVTFFDTPGHAAFKSMRHATSRLTDIVVVVIAADDGVKSQTVEVFDLLKEFPNLAPVVAVTKIDQYDVDKEKAVDRISRQLLEHSITTEGYGGEVPIVPVSAVTREGFDDLLETLLLQAEVLELRADNKAAAEGLVVDSAIVKGQGGVADVLVTWGKLKPKDVVVAGTEYGKVRGLIGSDGRRIKEAGAAEPVRIVGMKGLPKMGDEVVVVASESEARAVVAQRIKQQEVKELEKQAEKLGSKRLSEQATKRLKDMAAAAIRRREEALYDAREAARVMKSRRDESSKAAAKAAEEFAARAMSYAEEAIRRSEAQDEDQDAGPTKCFAIFKAEGFGMLEAMSQVMTEVPQDEVELSLLKTGLGSVTQSDVEAAALAQASIFTFNVGGVPADVKAKAQKEGVQIHSHDVIYRFLDDVKAVMSSLLPPGFQETVIGEAKTLQVFETTGKNKETVSVAGLAVSSGKLSRTHFFRVIRDDEVVADRAKAASMRRHKDRVNEVTKDKECGVALEDFDAFKEGDVVQCYSLEEIKRTL 1026
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Match: A0A5D6XQ09_9STRA (Tr-type G domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ09_9STRA) HSP 1 Score: 398 bits (1023), Expect = 4.720e-123 Identity = 247/660 (37.42%), Postives = 364/660 (55.15%), Query Frame = 1
Query: 109 VSVRDLAVAMSKKVREVTKMLRQMGETNVSPEFMVDPDTAELVALEFGLRTKRLKLRNGDLGRTVVTKESFDSLAPRPAVVSVMGHVDHGKTTLLDALRTSKVAGTESAGITQKIGAFSVDVNDS-----SVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKSQTIEVLQLL--NEFPNLAPVVAIDRYGVDAEKAVDTISRQLLEHNVITEGYGGQVPVVPVSAVTREGFDNLLDTLMLQAEILELRADDKAPAEGVVVDSSMVKGKGGVADVLISWGKLKLGDVVVAGMEYGKVRSLSDSHGARLKEAGAAEPVRVVGMKGLPRMGDEVLVVESEAKAKAIVAQRRKQEELKQLEKQEETLGLKRVSEDAIKRLKAEAQQAIRRREAALFHAREAVRTMKSRRDESSAXXXXXXEAIAAKAMEKAEEAVRKAKMQEEEVDVGPTKFYAIFKAEGFGQLEAMSQVMNDVPQEEVELSLVRTGLGSVTQSDVEAAALAGAPIFAFNVGPVPPDVKATAQGEGVQIHNHDVIYRFLDGVKAVMSELLPPEKKETVIGEGKTLEVFEASGRNKESVRVAGLTVSSGKLTREHLFRVVRGEEILADGLRASSMRRFKDKVSEVTKDKECGVALEGFNDFEEGDIVQCYILDEMKRSL 2067
+SV+DLA M K R + K LR +GE V E ++ AEL + L D+ TV + PRP +VSVMGHVDHGKTTLLDALR SK+A E+ GITQ IGAF+V++ +TF DTPGHAAF MR S +TD++++V+AADDGV+ QT+EV+QL N P + V D + D ++ + ++ QLL V+ E GG P+V VS T G D L +T+ L AE+L+LRAD +A E VV+++++ +G G D ++ WG LK G VVV G+EYGK+R+L D G R KE G PVRVVG+KGLP GD +LVVESE +AK ++AQR++ E + EE HA + M +RR E I + E+A+E R A ++ E I K + G + A+ +++ +P +E + + +G V+ SD+E A GA ++AFN+ P + A + V I H V+Y LD +K ++ + L ++ VIG + L+ + + ++ +AG ++ G + + +R++R E LADGL SMR F++KV EVTK +ECG+ L+G + F+ GD++Q Y++ +KR+L
Sbjct: 326 ISVKDLAERMCVKSRVLVKALRDLGERGVKDETVLSNAIAELAVESLHMVPVLLPPEFVDVELTVPPADC-SMFPPRPPIVSVMGHVDHGKTTLLDALRRSKIAAGEAGGITQSIGAFTVELGKKFGAQHRITFIDTPGHAAFSGMRARGSEVTDMIVLVVAADDGVRPQTVEVIQLAHKNNVPLVVAVTKCDMHAHDEQEVRNRVADQLLNRGVVVEQMGGDTPLVCVSGRTGAGLDALKETIALHAEVLDLRADSRAHGEAVVLEANVARGVGTQVDAVVKWGTLKNGSVVVCGLEYGKIRALMDESGKRAKEVGPGNPVRVVGLKGLPNAGDALLVVESEDRAKEVIAQRQEMLEWDLMATAEEDGD-------------------------GSGHAHRRRKYMGARRK---------WEQIELRRREEADEVKRVAALKAGEDGYVANVVPIIVKTDSVGVISAIDELIASLPSDEAVVKRIMAAVGPVSSSDLEMAQATGATVYAFNIKH-PGTIDREALEKSVSIRQHRVVYSMLDDIKELLRDNLAGREETEVIGAAEVLQSIPITTSGRRTINIAGCKITMGAMNMQAKYRLIRDGETLADGLSMESMRHFQEKVGEVTKGQECGLQLDGHDSFQPGDVLQAYVVKVVKRAL 949
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Match: K3W5Z8_GLOUD (Tr-type G domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5Z8_GLOUD) HSP 1 Score: 386 bits (991), Expect = 6.130e-118 Identity = 241/660 (36.52%), Postives = 370/660 (56.06%), Query Frame = 1
Query: 109 VSVRDLAVAMSKKVREVTKMLRQMGETNVSPEFMVDPDTAELVALEFGLRTKRLKLRNGDLGRTVVTKESFDSLAPRPAVVSVMGHVDHGKTTLLDALRTSKVAGTESAGITQKIGAFSVDV-----NDSSVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKSQTIEVLQLL--NEFPNLAPVVAIDRYGVDAEKAVDTISRQLLEHNVITEGYGGQVPVVPVSAVTREGFDNLLDTLMLQAEILELRADDKAPAEGVVVDSSMVKGKGGVADVLISWGKLKLGDVVVAGMEYGKVRSLSDSHGARLKEAGAAEPVRVVGMKGLPRMGDEVLVVESEAKAKAIVAQRRKQEELKQLEKQEETLGLKRVSEDAIKRLKAEAQQAIRRREAALFHAREAVRTMKSRRDESSAXXXXXXEAIAAKAMEKAEEAVRKAKMQEEEVDVGPTKFYAIFKAEGFGQLEAMSQVMNDVPQEEVELSLVRTGLGSVTQSDVEAAALAGAPIFAFNVGPVPPDVKATAQGEGVQIHNHDVIYRFLDGVKAVMSELLPPEKKETVIGEGKTLEVFEASGRNKESVRVAGLTVSSGKLTREHLFRVVRGEEILADGLRASSMRRFKDKVSEVTKDKECGVALEGFNDFEEGDIVQCYILDEMKRSL 2067
+SV+DLA M K + + K L+ +GE + E ++ D AEL + L DL T+ + PR ++SVMGHVDHGKTTLLD+LR SKVA E+ GITQ IGAF+V++ N S +TF DTPGHAAF +MR S +TDI+++V+AADDGV+ QT+EV+QL N P + V D + D ++ + I+ QLL VI E GG P+V VS T EG D L +T+ L AEIL+LRADDKA E VV+++++ +G G D ++ WG LK G +VV G+EYGK+R+L D G R+K+ P RVVG+KGLP GD +LVV++E +AK ++AQR +EL + + L A A++ + H R + M +RR E I + ++ +EA R A ++ + I K + G + A+ +++ +P +E + + +G V+ SDV A GA I+AFN+ P + A + V I H V+Y LD +K ++ + L ++ +IG + ++ + + + +AG ++ G + + +R++R E + + + SMR F++KV EVTK +ECG+ L+G +DF+ GDI+Q Y++ +K++L
Sbjct: 370 ISVKDLAERMCVKSKVLIKALKDLGERGMKDESVLSNDIAELAVESLNMVPVLLPPDFVDLELTMPPADC-SMFPPRSPIISVMGHVDHGKTTLLDSLRKSKVAAAEAGGITQSIGAFTVELGKKFGNQSKITFIDTPGHAAFSNMRSRGSEVTDIIVLVVAADDGVRPQTVEVIQLAQKNNVPMVVAVTKCDMHSHDEQEVRNRIADQLLNRGVIVEQMGGDTPLVCVSGKTGEGIDTLKETIALHAEILDLRADDKAAGEAVVLEANVARGVGTQVDAIVKWGTLKTGTIVVCGLEYGKIRALVDQAGKRVKQIVPGNPARVVGLKGLPNAGDALLVVDTEERAKEVIAQR---QELLEWD------------------LMATAEEDEDDPSGNVTHRRR--KYMGARRK---------WEQIELRRRQEVDEAKRIASLKAGDEGYVANIVPIIVKTDSVGVISAIDELIASLPSDEAIIKRILASVGPVSSSDVAMAEATGATIYAFNIKH-PSTIDREALEKNVSIRQHRVVYTMLDDIKELLRDNLSGVEETEIIGSAEVIQSIPITKSGRRTTNIAGCKITMGLMNMQAKYRLLRDGETIVEDVSMESMRHFQEKVGEVTKGQECGLLLDGIDDFQPGDILQAYVVKVVKQAL 995
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Match: A0A7V8DS12_9PROT (Translation initiation factor IF-2 n=2 Tax=Hyphomonadaceae bacterium TaxID=2026748 RepID=A0A7V8DS12_9PROT) HSP 1 Score: 380 bits (976), Expect = 6.290e-117 Identity = 245/656 (37.35%), Postives = 380/656 (57.93%), Query Frame = 1
Query: 109 VSVRDLAVAMSKKVREVTKMLRQMGETNVSPEFMVDPDTAELVALEFGLRTKRLKLRNGDLGRTVVTKESFDSLAPRPAVVSVMGHVDHGKTTLLDALRTSKVAGTESAGITQKIGAFSVDV-NDSSVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKSQTIEVLQLLN--EFPNLAPVVAIDRYGVDAEKAVDTISRQLLEHNVITEGYGGQVPVVPVSAVTREGFDNLLDTLMLQAEILELRADDKAPAEGVVVDSSMVKGKGGVADVLISWGKLKLGDVVVAGMEYGKVRSLSDSHGARLKEAGAAEPVRVVGMKGLPRMGDEVLVVESEAKAKAIVAQRRKQEELKQLEKQEETLGLKRVSEDAIKRLKAEAQQAIRRREAALFHAREAVRTMKSRRDESSAXXXXXXEAIAAKAMEKAEEAVRKAKMQEEEVDVGPTKFYAIFKAEGFGQLEAMSQVMNDVPQEEVELSLVRTGLGSVTQSDVEAAALAGAPIFAFNVGPVPPDVKATAQGEGVQIHNHDVIYRFLDGVKAVMSELLPPEKKETVIGEGKTLEVFEASGRNKESVRVAGLTVSSGKLTREHLFRVVRGEEILADGLRASSMRRFKDKVSEVTKDKECGVALEGFNDFEEGDIVQCYILDEMKRSL 2067
++V DLA M++++ +V K L + G+ + ++D DTAEL+A +FG KR+ + ++G V ++ + PRP VV++MGHVDHGKT+LLDA+R + V E+ GITQ IGA+ V + + VTF DTPGHAAF +MR +++TDIV++V+AADDGV QTIE + P + V ID+ DA K + +LL++ V+TE +GG V V VSA+ + G D LL+T+MLQAE+LEL A+ AEG+V+++ + KG+G +A VL+ G +K GD++VAG ++G+VR +SD G L+EAG ++PV V+G+ G P GD+++VVE+EA+A+ + R + ++R KA +Q+ AR + TM +R ++ K++E F I K++ G EA+S ++ + EEV ++ G+G +T+SDV A AGA I AFNV P V+ A+ EGV+I + +IY +D VK ++S LL PE KET IG + L+VF + K +AG V+ G + R R++R + ++ +G + S+++RFKD+VSEV +ECG+ + D EGD ++C+ ++ +KRSL
Sbjct: 297 ITVADLANRMAERLTDVVKYLMKQGQM-LKGNDVLDADTAELIATDFGHVAKRVAESDVEIGLEGVV-DTDTNQQPRPPVVTIMGHVDHGKTSLLDAIRQADVVSGEAGGITQHIGAYQVRLPSGEKVTFLDTPGHAAFSAMRSRGAKVTDIVVLVVAADDGVMPQTIEAINHAKAANVPMIVAVNKIDKPSADASKVLS----ELLQYEVVTEEFGGDVLAVQVSALKKTGLDKLLETIMLQAEVLELGANPNRSAEGIVIEAKLDKGRGPIATVLVQRGTMKRGDIIVAGSQWGRVRVMSDERGQALEEAGPSQPVEVLGLDGAPEPGDQLVVVENEARAREVTDYRVR-----------------------MRRDKAVVRQS----------ARTGLETMLAR--------------------------IKDQKIKE---------FPFIVKSDVQGSAEAISASVSKLATEEVLGRVIHQGVGGITESDVSLAKSAGAVILAFNVRAGKP-VRDLAEAEGVEIRYYSIIYNLIDDVKDILSGLLEPEHKETFIGYAQVLQVFNITKVGK----IAGCKVTEGNIKRGCGVRLLRDDVVIHEG-KLSTLKRFKDEVSEVNPGQECGMGFTDYQDIREGDQIECFEVEIIKRSL 872
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Match: A0A1G6E0U9_9HYPH (Translation initiation factor IF-2 n=1 Tax=Bauldia litoralis TaxID=665467 RepID=A0A1G6E0U9_9HYPH) HSP 1 Score: 378 bits (971), Expect = 2.460e-116 Identity = 237/655 (36.18%), Postives = 371/655 (56.64%), Query Frame = 1
Query: 109 VSVRDLAVAMSKKVREVTKMLRQMGETNVSPEFMVDPDTAELVALEFGLRTKRLKLRNGDLGRTVVTKESFDSLAPRPAVVSVMGHVDHGKTTLLDALRTSKVAGTESAGITQKIGAFSVDVNDSSVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKSQTIEVLQLLN--EFPNLAPVVAIDRYGVDAEKAVDTISRQLLEHNVITEGYGGQVPVVPVSAVTREGFDNLLDTLMLQAEILELRADDKAPAEGVVVDSSMVKGKGGVADVLISWGKLKLGDVVVAGMEYGKVRSLSDSHGARLKEAGAAEPVRVVGMKGLPRMGDEVLVVESEAKAKAIVAQRRKQEELKQLEKQEETLGLKRVSEDAIKRLKAEAQQAIRRREAALFHAREAVRTMKSRRDESSAXXXXXXEAIAAKAMEKAEEAVRKAKMQEEEVDVGPTKFYAIFKAEGFGQLEAMSQVMNDVPQEEVELSLVRTGLGSVTQSDVEAAALAGAPIFAFNVGPVPPDVKATAQGEGVQIHNHDVIYRFLDGVKAVMSELLPPEKKETVIGEGKTLEVFEASGRNKESVRVAGLTVSSGKLTREHLFRVVRGEEILADGLRASSMRRFKDKVSEVTKDKECGVALEGFNDFEEGDIVQCYILDEMKRSL 2067
+++++LA M+++ EV K+L + G+ V ++D DTA+L+A E G +R+ + + G T++ D L PRP VV++MGHVDHGKT+LLDA+R + V E+ GITQ IGA+ V+ N +TF DTPGHAAF +MR +++TDIV++V+AADDGV QTIE + P + + ID+ D + + +LL+H V E GG++ V VSA+ + D LL+T++LQ+E+LEL+A+ AEG VV++ + +G+G VA VL+ G L +GD+VVAG E+GKVR+L D HG ++ A + PV V+G +G P GD + VVESE++A+ + A R +Q KR KA+A+ L AR ++ M ++ S G F + K + G +EA++Q + + +EV ++ +G+G +T+SDV AA + A I FNV + A+ EG++I +++IY +D VKA MS +L PE++ET++G + LE+F S K VAG V+ G + R R++R ++ +G + S+++RFKD+V EV +ECG+A E + D GD+++CY ++E+ RSL
Sbjct: 283 ITIQELANRMAERAVEVIKLLMKQGQL-VKAADIIDSDTAQLIAEEMGHTVRRVAESDVEEGLFSGTEDEGD-LQPRPPVVTIMGHVDHGKTSLLDAIREADVVTGEAGGITQHIGAYQVEQNGQKITFIDTPGHAAFTAMRARGAKVTDIVILVVAADDGVMPQTIEAIHHAKAANVPIIVAINKIDKPDGDPSR----VRNELLQHEVFVESMGGEILDVEVSAIQKTNLDKLLETVLLQSELLELKANPDREAEGTVVEAKLDRGRGPVATVLVQRGTLHIGDIVVAGSEWGKVRALIDDHGVQVDAAVPSMPVEVLGFQGAPDAGDRMAVVESESRAREVTAYRARQ-----------------------KREKAQAR---------LTGARGSLAEMMNQLQAS-----------------------------------GQKVFPLLIKGDVQGSVEAITQALEALGTDEVAARVLHSGVGGITESDVTLAATSDAAIIGFNVR-ANAQARNAAEAEGIEIRYYNIIYNLVDDVKAAMSGMLSPERRETMLGNAEILEIFNISKTGK----VAGCRVTDGVVQRGAHVRLIRDNVVIHEG-KLSTLKRFKDEVREVPTGQECGMAFESYEDMRPGDVIECYRVEEIARSL 858
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Match: A0A231V151_9HYPH (Translation initiation factor IF-2 n=3 Tax=Notoacmeibacter TaxID=2024982 RepID=A0A231V151_9HYPH) HSP 1 Score: 378 bits (970), Expect = 3.520e-116 Identity = 244/682 (35.78%), Postives = 379/682 (55.57%), Query Frame = 1
Query: 28 RGGQGASRKRREMKAVVAKQVQIAAGPVSVRDLAVAMSKKVREVTKMLRQMGETNVSPEFMVDPDTAELVALEFGLRTKRLKLRNGDLGRTVVTKESFDSLAPRPAVVSVMGHVDHGKTTLLDALRTSKVAGTESAGITQKIGAFSVDVNDSSVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKSQTIEVLQLLNE--FPNLAPVVAIDRYGVDAEKAVDTISRQLLEHNVITEGYGGQVPVVPVSAVTREGFDNLLDTLMLQAEILELRADDKAPAEGVVVDSSMVKGKGGVADVLISWGKLKLGDVVVAGMEYGKVRSLSDSHGARLKEAGAAEPVRVVGMKGLPRMGDEVLVVESEAKAKAIVAQRRKQEELKQLEKQEETLGLKRVSEDAIKRLKAEAQQAIRRREAALFHAREAVRTMKSRRDESSAXXXXXXEAIAAKAMEKAEEAVRKAKMQEEEVDVGPTKFYAIFKAEGFGQLEAMSQVMNDVPQEEVELSLVRTGLGSVTQSDVEAAALAGAPIFAFNVGPVPPDVKATAQGEGVQIHNHDVIYRFLDGVKAVMSELLPPEKKETVIGEGKTLEVFEASGRNKESVRVAGLTVSSGKLTREHLFRVVRGEEILADGLRASSMRRFKDKVSEVTKDKECGVALEGFNDFEEGDIVQCYILDEMKRSL 2067
RGGQ + + + M+ V + +SV+DLA M+++ +V K++ Q G+ + P ++D DTAEL+A E G KR+ + +LG V D + RP VV++MGHVDHGKT+LLDA+R + V E+ GITQ IGA+ V+ + +TF DTPGHAAF +MR + +TDI ++V+AADD V QTIE + P + + ID+ DA K + +LL+H V E GG+V V VSA + D LL+ ++LQ+E+L+L+A+ PAEG VV++ + KG+G VA VL+ G L+ GD+VVAG E+G+VR+L DS G +LKEAG + PV ++G+ G P+ GD + VVE+EA+A+ I R++ KQ+ +Q + G +++++ A+A Q ++ T+F + KA+ G EA+ + V +EV++ +V G G++T+SD+ A + A I AFNV + ++ G +I +++IY +D VKA MS LL PE +ET IG + LEVF + K VAG V+ G++ R R++R ++ G + +++RFKD+VSEV +ECG+A E + D E D+++C+ ++E+ RSL
Sbjct: 263 RGGQSSGPREKVMREVTVPET------ISVQDLAQRMAERAVDVVKLMMQQGQM-LKPGDIIDADTAELIATEMGHTVKRVSESDIELGLHDVEDREED-MQSRPPVVTIMGHVDHGKTSLLDAIREANVVSGEAGGITQHIGAYQVEKDGQKITFIDTPGHAAFTAMRARGAEVTDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKPAADASK----VRTELLQHEVFVESMGGEVLDVEVSATKKTNLDGLLEAILLQSELLDLKANPDRPAEGSVVEAQLDKGRGSVATVLVQAGTLRTGDIVVAGNEWGRVRALVDSTGEQLKEAGPSMPVELLGLSGTPQAGDRLAVVENEARAREISDYRQRLAREKQVARQAGSRG-------SLEQMMAQA--------------------------------------------------------QANQI----TEFPLLIKADVQGSAEAIIGALEKVGNDEVQVRVVHAGAGAITESDISLAEASNAAIIAFNVR-ANKQARDASEQNGTEIRYYNIIYDLVDDVKAAMSGLLSPEMRETFIGYAEILEVFNITKVGK----VAGCRVTEGRVERGAGVRLLRDNVVIHTG-KLKTLKRFKDEVSEVQSGQECGMAFENYEDIREKDVIECFTVEEVARSL 859
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Match: A0A6N1VEZ9_9HYPH (Translation initiation factor IF-2 n=1 Tax=Oricola thermophila TaxID=2742145 RepID=A0A6N1VEZ9_9HYPH) HSP 1 Score: 377 bits (967), Expect = 9.050e-116 Identity = 236/671 (35.17%), Postives = 382/671 (56.93%), Query Frame = 1
Query: 61 EMKAVVAKQVQIAAGPVSVRDLAVAMSKKVREVTKMLRQMGETNVSPEFMVDPDTAELVALEFGLRTKRLKLRNGDLGRTVVTKESFDSLAPRPAVVSVMGHVDHGKTTLLDALRTSKVAGTESAGITQKIGAFSVDVNDSSVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKSQTIEVLQLLNE--FPNLAPVVAIDRYGVDAEKAVDTISRQLLEHNVITEGYGGQVPVVPVSAVTREGFDNLLDTLMLQAEILELRADDKAPAEGVVVDSSMVKGKGGVADVLISWGKLKLGDVVVAGMEYGKVRSLSDSHGARLKEAGAAEPVRVVGMKGLPRMGDEVLVVESEAKAKAIVAQRRKQEELKQLEKQEETLGLKRVSEDAIKRLKAEAQQAIRRREAALFHAREAVRTMKSRRDESSAXXXXXXEAIAAKAMEKAEEAVRKAKMQEEEVDVGPTKFYAIFKAEGFGQLEAMSQVMNDVPQEEVELSLVRTGLGSVTQSDVEAAALAGAPIFAFNVGPVPPDVKATAQGEGVQIHNHDVIYRFLDGVKAVMSELLPPEKKETVIGEGKTLEVFEASGRNKESVRVAGLTVSSGKLTREHLFRVVRGEEILADGLRASSMRRFKDKVSEVTKDKECGVALEGFNDFEEGDIVQCYILDEMKRSL 2067
E + ++++VQ+ +++++LA M+++ +V K L + G+ + P ++D DTAEL+A+EFG KR+ + + G V D + PRP VV++MGHVDHGKT+LLDA+R + V E+ GITQ IGA+ V+ + +TF DTPGHAAF +MR ++ TDI ++V+AADD V QTIE + + P + + +D+ D +K + +LL+H V E GG + V VSA+ D LL++++LQAE+LEL+A+ AEGVV+++ + KG+G VA VL+ G L++GD++VAG E+G+VR++ + G +LKEA ++PV ++G++G P GD+ VVESEA+A+ I E +Q +E+ + + S +++++ A+A RD+ A +F + KA+ G +EA+ + + +EV+ +V +G G +T++DV A GA I AFNV + A+ GV+I +++IY LD VKA MS LL PE++ET +G + LEVF + K VAG V+ GK+ R R++R ++ +G + +++RFKD+VSEV +ECG+A E ++D GD+++C+ ++E+ RSL
Sbjct: 266 EPREKISREVQLPE-TITIQELAQRMAERAVDVVKFLMKQGQM-MKPGDLIDADTAELIAVEFGHTVKRVTEADVEEGIFDVEDRPED-MKPRPPVVTIMGHVDHGKTSLLDAIRKANVVSGEAGGITQHIGAYQVEQDGQKITFLDTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHIKAAGVPMIVAINKVDKPEADPQK----VRTELLQHEVFVESMGGDIQEVEVSALKGTNLDGLLESILLQAELLELKANPDRSAEGVVIEAKLDKGRGSVATVLVQAGTLRIGDILVAGDEWGRVRAIVNDRGQQLKEAVPSQPVEILGLQGTPLAGDKFAVVESEARAREI-------SEYRQRVTREKAVARQAGSRGSLEQMMAQA------------------------RDKEMA------------------------------------EFPLLIKADVQGSVEAIIGALEKLGTDEVQARIVHSGAGGITETDVSLAESTGAAILAFNVR-ANKQARDAAEAAGVEIRYYNIIYNLLDDVKAAMSGLLSPERRETFLGNAEILEVFNITKVGK----VAGCRVTEGKVERGAGVRLIRDNVVIHEG-KLKTLKRFKDEVSEVPGGQECGMAFENYDDIRAGDVIECFRVEEIARSL 856
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Match: A0A662XC20_9STRA (Tr-type G domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XC20_9STRA) HSP 1 Score: 379 bits (974), Expect = 9.810e-116 Identity = 246/668 (36.83%), Postives = 365/668 (54.64%), Query Frame = 1
Query: 109 VSVRDLAVAMSKKVREVTKMLRQMGETNVSPEFMVDPDTAELVALEFGLRTKRLKLRNGDLGRTVVTKESFDSLAPRPAVVSVMGHVDHGKTTLLDALRTSKVAGTESAGITQKIGAFSVDV-----NDSSVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKSQTIEVLQLL--NEFPNLAPVVAIDRYGVDAEKAVDTISRQLLEHNVITEGYGGQVPVVPVSAVTREGFDNLLDTLMLQAEILELRADDKAPAEGVVVDSSMVKGKGGVADVLISWGKLKLGDVVVAGMEYGKVRSLSDSHGARLKEAGAAEPVRVVGMKGLPRMGDEVLVVESEAKAKAIVAQRRKQEELKQL----EKQEETLG----LKRVSEDAIKRLKAEAQQAIRRREAALFHAREAVRTMKSRRDESSAXXXXXXEAIAAKAMEKAEEAVRKAKMQEEEVDVGPTKFYAIFKAEGFGQLEAMSQVMNDVPQEEVELSLVRTGLGSVTQSDVEAAALAGAPIFAFNVGPVPPDVKATAQGEGVQIHNHDVIYRFLDGVKAVMSELLPPEKKETVIGEGKTLEVFEASGRNKESVRVAGLTVSSGKLTREHLFRVVRGEEILADGLRASSMRRFKDKVSEVTKDKECGVALEGFNDFEEGDIVQCYILDEMKRSL 2067
VSV+DLA M K R + + L+ +GET + E ++ D AELV + L DL T + + S RP +VSVMGHVDHGKTTLLDALR SKVA +E+ GITQ+IGAFSV++ + S++TF DTPGHAAF +MR S LTD++++V+AADDGV+ QT+EV QL N P + V +D + D + V + +LL ++ E GG P+V VS T EG D L +T+ L AE+L+LRAD E +V++++M +G G D ++ WG LK G VV G+EYGK+R+L D G R+K+ P RV+GMKGLP G +L VESE +AK +VA R+ + + E++ ET G +R + A R K AQ +RRREAA EEA R A ++ + I K + G + A+ +++ +P +E + + +G VT SD+ A GA I+AFN+ P + A + V + H V+Y LD +K ++ + L ++ V+G + ++ S +++ +AG V+SG L + +R++R E + + + SMR F+ KVSEVTK +ECG+ L +DF+ GD+++ Y +K+ L
Sbjct: 338 VSVKDLAERMCVKTRVLFRALKDLGETGLKEESVLPSDVAELVVESLNMVPVLLPPEFVDLDFTPLPTDC-SSFPTRPPIVSVMGHVDHGKTTLLDALRKSKVAASEAGGITQRIGAFSVELGKKFGSQSAMTFIDTPGHAAFSNMRSRGSELTDLLVLVVAADDGVRPQTVEVAQLALKNNVPLVVAVTKMDMHEHDKGEVVKRLGDELLNQGIVVESMGGDTPMVCVSGKTGEGLDALKETIALHAEMLDLRADTALAGEAIVLEANMARGVGAQVDTIVKWGTLKQGSFVVCGLEYGKIRALVDESGKRVKQVTPGRPARVIGMKGLPEGGVALLSVESEERAKEVVAARQAMLDWDLMATAEEEEAETTGNGYGQRRRRKFAGARRKW-AQVEVRRREAA-------------------------------------EEAKRVAALKPGDEGYVANVVPIIVKTDSVGVISAIDELIASLPSDEAVIKRITAAVGPVTSSDLAMAQATGATIYAFNIKH-PSSIDHEALQKEVSLRQHRVVYSLLDDIKELLQDNLDGVVQQEVVGSAEVIQSIPISRAGRQTANIAGCKVTSGSLNMQAKYRLIRDGETVIENVDMESMRHFQQKVSEVTKGQECGLQLVDTDDFQPGDVLEAYTTKVVKKEL 965
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Match: UPI00096B9D77 (translation initiation factor IF-2 n=1 Tax=Salaquimonas pukyongi TaxID=2712698 RepID=UPI00096B9D77) HSP 1 Score: 375 bits (963), Expect = 2.130e-115 Identity = 239/655 (36.49%), Postives = 370/655 (56.49%), Query Frame = 1
Query: 109 VSVRDLAVAMSKKVREVTKMLRQMGETNVSPEFMVDPDTAELVALEFGLRTKRLKLRNGDLGRTVVTKESFDSLAPRPAVVSVMGHVDHGKTTLLDALRTSKVAGTESAGITQKIGAFSVDVNDSSVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKSQTIEVLQLLN--EFPNLAPVVAIDRYGVDAEKAVDTISRQLLEHNVITEGYGGQVPVVPVSAVTREGFDNLLDTLMLQAEILELRADDKAPAEGVVVDSSMVKGKGGVADVLISWGKLKLGDVVVAGMEYGKVRSLSDSHGARLKEAGAAEPVRVVGMKGLPRMGDEVLVVESEAKAKAIVAQRRKQEELKQLEKQEETLGLKRVSEDAIKRLKAEAQQAIRRREAALFHAREAVRTMKSRRDESSAXXXXXXEAIAAKAMEKAEEAVRKAKMQEEEVDVGPTKFYAIFKAEGFGQLEAMSQVMNDVPQEEVELSLVRTGLGSVTQSDVEAAALAGAPIFAFNVGPVPPDVKATAQGEGVQIHNHDVIYRFLDGVKAVMSELLPPEKKETVIGEGKTLEVFEASGRNKESVRVAGLTVSSGKLTREHLFRVVRGEEILADGLRASSMRRFKDKVSEVTKDKECGVALEGFNDFEEGDIVQCYILDEMKRSL 2067
++++DLA MS++ +V K L + G+ + P ++D DTAEL+A EFG KR+ + + G T ++ +++ RP VV++MGHVDHGKT+LLDA+R + V E+ GITQ IGA+ VD + +TF DTPGH AF +MR + TDI ++V+AADDGV QTIE + E P + + ID+ D K + +LL+H V E GG+ V VSA+ D+LLD ++LQ+E+LEL+AD PAEG +++S + KG+G VA VL+ G L+ GD+V+AG E+GKVR+L + HG ++ EA + PV ++G+ G P G+ VVE+EA+A+ I R++ + R KA AQ A +R ++ M S+ ++ ++++E + + K + G +EA+ Q + + EEV +V +G +T+SDV AA + API AFNV K A+ EG++I + +IY +D +K VMS +L PE++ET +G + LEVF S K VAG VS GK+ R R++R ++ +G + S+++RFKD+VSEV +ECG+A E + D +GD ++C+ ++ ++RSL
Sbjct: 260 ITIQDLASRMSERSVDVIKYLMKQGQM-MKPGDVIDADTAELIASEFGHTVKRVSESDVEEG-LFDTSDNPENMVSRPPVVTIMGHVDHGKTSLLDAIRNANVVKGEAGGITQHIGAYQVDRDGQRITFIDTPGHEAFTAMRARGAMATDIAILVVAADDGVMPQTIESINHAKAAEVPIIVAINKIDKESADPNK----VKTELLQHEVFVESMGGETQEVEVSALKGTNLDSLLDAILLQSEVLELKADPDRPAEGTIIESQLDKGRGPVATVLVKRGTLRTGDIVIAGNEWGKVRALVNDHGEQVDEATPSTPVEILGLSGAPSAGERFTVVENEARAREISDYRQR-----------------------LARDKAVAQMA---------GSRGSLEQMISQ--------------------------LQTSELKEAAI---------VVKGDVQGSVEAIEQALAKMNTEEVAARVVHGAVGGITESDVSLAAASNAPILAFNVR-ANKQAKEAAEREGIEIRYYSIIYDLVDDMKQVMSGMLAPERRETFLGYAEILEVFNVSKVGK----VAGCRVSEGKVERGSGVRLLRDNVVIHEG-KLSTLKRFKDEVSEVPAGQECGMAFENYQDIRQGDQIECFRVEHIERSL 835
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Match: G4ZWA2_PHYSP (Tr-type G domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZWA2_PHYSP) HSP 1 Score: 377 bits (969), Expect = 2.370e-115 Identity = 249/679 (36.67%), Postives = 372/679 (54.79%), Query Frame = 1
Query: 52 KRREMKAVVAKQVQIAAGPVSVRDLAVAMSKKVREVTKMLRQMGETNVSPEFMVDPDTAELVALEFGLRTKRLKLRNGDLGRTVVTKESFDSLAPRPAVVSVMGHVDHGKTTLLDALRTSKVAGTESAGITQKIGAFSVDVN-----DSSVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKSQTIEVLQLL--NEFPNLAPVVAIDRYGVDAEKAVDTISRQLLEHNVITEGYGGQVPVVPVSAVTREGFDNLLDTLMLQAEILELRADDKAPAEGVVVDSSMVKGKGGVADVLISWGKLKLGDVVVAGMEYGKVRSLSDSHGARLKEAGAAEPVRVVGMKGLPRMGDEVLVVESEAKAKAIVAQRRKQEELKQLEKQEETLGLKRVSEDAIKRLKAEAQQAIRRREAALFHAREAVRTMKSRRDESSAXXXXXXEAIAAKAMEKAEEAVRKAKMQEEEVDVGPTKFYAIFKAEGFGQLEAMSQVMNDVPQEEVELSLVRTGLGSVTQSDVEAAALAGAPIFAFNVGPVPPDVKATAQGEGVQIHNHDVIYRFLDGVKAVMSELLPPEKKETVIGEGKTLEVFEASGRNKESVRVAGLTVSSGKLTREHLFRVVRGEEILADGLRASSMRRFKDKVSEVTKDKECGVALEGFNDFEEGDIVQCYILDEMKRSL 2067
KR+ + + A++V+I ++V+DLA MS K R V + L+ +GE ++ E ++ D AELV + L DL T + E S RP VVSVMGHVDHGKTTLLDALR SKVA TE+ GITQ+IGAFSV++ S+VTF DTPGHAAF +MR S LTD++++V+AADDGV+ QT+EV +L N P + V +D +G D ++ + + +LL V+ E GG P+V VS T EG D L +T+ L AE+L+LRAD E VV+++++ +G G D ++ WG +K G VV G+EYGKVR+L D G R+K+ PVRV+G+KGLP G +L V +E +AK +VA R + Q+ K EE E+A + + AR + ++ RR E+ AEEA R A ++ + I K + G + A+ +++ +P +E + + + +G VT SD+ A GA I++FN+ P + A + V + H V+Y LD +K ++ + L VIG + ++ S + +AG V+SG L + +R+VR E + + + +SMR F+ KVSEV K +ECG+ L G ++F+ GDI++ Y +K L
Sbjct: 283 KRKPKEQLPAQEVEIPTS-LTVKDLAERMSVKTRVVFRALKDLGENGLNEESVLTNDIAELVVDSQNMVPVLLPPDFVDLELTPLP-EDCSSFPVRPPVVSVMGHVDHGKTTLLDALRKSKVAATEAGGITQRIGAFSVELGKKFGAQSNVTFIDTPGHAAFSNMRSRGSELTDLLVLVVAADDGVRPQTVEVARLAIKNNVPLVVAVTKMDMHGHDKDEVTNRLGSELLNQGVVVESMGGDTPMVCVSGKTGEGLDQLKETIALHAEMLDLRADTSVAGEAVVLEANVARGVGTQVDTIVKWGTVKQGSFVVCGLEYGKVRALVDQAGKRVKQMTPGNPVRVIGLKGLPEGGVALLSVATEERAKEVVAAREAMLDWDQMAKAEE--------EEA----EIQGDDGSHXXXXXXXGARRKWQQVEVRRREA------------------AEEAKRVAALKPGDEGYIANVVPIIVKTDSVGVISAIDELIASLPSDEAAIKCIMSAVGPVTSSDIVMAEATGATIYSFNIKH-PASIDQEALQKQVTLRQHRVVYSLLDDIKELLQDNLQGVVVHDVIGSAEVIQSIPISTSGSRTTNIAGCKVTSGSLNMQAKYRLVRDGETIIENVDMASMRHFQQKVSEVNKGQECGLQLAGTDEFQPGDILEAYTTKVVKPEL 928 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9818.23918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9818.23918.1 >prot_P-canaliculata_contig9818.23918.1 ID=prot_P-canaliculata_contig9818.23918.1|Name=mRNA_P-canaliculata_contig9818.23918.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=690bp RYGGSPAGHRGGQGASRKRREMKAVVAKQVQIAAGPVSVRDLAVAMSKKVback to top mRNA from alignment at P-canaliculata_contig9818:2736..11864- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9818.23918.1 ID=mRNA_P-canaliculata_contig9818.23918.1|Name=mRNA_P-canaliculata_contig9818.23918.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=9129bp|location=Sequence derived from alignment at P-canaliculata_contig9818:2736..11864- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9818:2736..11864- >mRNA_P-canaliculata_contig9818.23918.1 ID=mRNA_P-canaliculata_contig9818.23918.1|Name=mRNA_P-canaliculata_contig9818.23918.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=4140bp|location=Sequence derived from alignment at P-canaliculata_contig9818:2736..11864- (Pelvetia canaliculata dioecious)back to top |