mRNA_P-canaliculata_contig9804.23901.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Match: D8LFF7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFF7_ECTSI) HSP 1 Score: 233 bits (594), Expect = 1.190e-76 Identity = 113/136 (83.09%), Postives = 119/136 (87.50%), Query Frame = 1 Query: 1 EGKAFLEENKGKEGVTETPSGLQYKVLKSGPEDGKTPLKTTKCSCHYRGKTINGDEFDSSFKRGKPTTFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDKQRSDLITPGAVLIFELELIEVQGPSAPRASEL 408 EGKAFL NK KEGV ET SGLQYKVLKSG GKTPL TKC CHYRG TI G+EFDSSFKRGKPT FAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGD +RS LITPGAVL+FELELIEVQGP+AP ++EL Sbjct: 25 EGKAFLAANKDKEGVVETASGLQYKVLKSGEAGGKTPLVGTKCLCHYRGTTITGEEFDSSFKRGKPTAFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDSKRSALITPGAVLVFELELIEVQGPAAPVSAEL 160
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Match: R1ENV3_EMIHU (Peptidylprolyl isomerase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ENV3_EMIHU) HSP 1 Score: 202 bits (515), Expect = 9.250e-65 Identity = 94/134 (70.15%), Postives = 110/134 (82.09%), Query Frame = 1 Query: 1 EGKAFLEENKGKEGVTETPSGLQYKVLKSGPEDGKTPLKTTKCSCHYRGKTINGDEFDSSFKRGKPTTFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDKQRSDLITPGAVLIFELELIEVQGPSAPRAS 402 EG A+L+ENK K GV PSGLQYKVLK P K+PL T CSCHYRG I+G EFDSS+KRG+PTTFAPNQVIKGWTEAMQ+M EGD WELY+PSELAYGD+QR ITPGAVL+FE+E++EV+G S P+A+ Sbjct: 16 EGLAWLDENKNKAGVVVLPSGLQYKVLKEAPAGAKSPLVGTPCSCHYRGTLIDGTEFDSSYKRGQPTTFAPNQVIKGWTEAMQLMGEGDKWELYVPSELAYGDRQRGQHITPGAVLVFEIEILEVKGDSKPKAA 149
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Match: A0A7S3WX35_9SPIT (Peptidylprolyl isomerase (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WX35_9SPIT) HSP 1 Score: 194 bits (494), Expect = 2.080e-61 Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 1 Query: 1 EGKAFLEENKGKEGVTETPSGLQYKVLKSGPEDGKTPLKTTKCSCHYRGKTINGDEFDSSFKRGKPTTFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDKQRSDLITPGAVLIFELELIEVQGPSAPRASE 405 +G A+L EN KEGV PSGLQYKV+ P K+PL T CSCHYRG I+G EFDSS+KRG+PTTFAPNQV+KGWTEAMQ+M EGD WELY+PSELAYGD+QR ITPGAVLIFELE++EV+G S + + Sbjct: 27 DGLAWLAENAKKEGVVTLPSGLQYKVITEAPAGAKSPLANTPCSCHYRGTLIDGTEFDSSYKRGQPTTFAPNQVVKGWTEAMQLMGEGDKWELYLPSELAYGDRQRGKFITPGAVLIFELEMLEVKGESKAKPKQ 161
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Match: A0A835YXV4_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXV4_9STRA) HSP 1 Score: 190 bits (482), Expect = 1.350e-59 Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 1 EGKAFLEENKGKEGVTETPSGLQYKVLKSGPEDGKTPLKTTKCSCHYRGKTINGDEFDSSFKRGKPTTFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDKQRSDLITPGAVLIFELELIEV 375 EG FL NK KEGV E PSGLQYKV+ SG G P +T C CHY+G TI GDEFDSSFKRG+P FAPNQVIKGWTEAMQ+M EGDHWEL+IPSELAYGD + +DLITPGAVL+FEL++++V Sbjct: 27 EGLDFLAANKAKEGVVELPSGLQYKVVASGDPKGPKPGPSTPCECHYKGTTIKGDEFDSSFKRGRPAVFAPNQVIKGWTEAMQLMHEGDHWELFIPSELAYGDARLNDLITPGAVLVFELQMLKV 151
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Match: A4RUM4_OSTLU (Peptidylprolyl isomerase n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RUM4_OSTLU) HSP 1 Score: 186 bits (473), Expect = 3.170e-58 Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 1 EGKAFLEENKGKEGVTETPSGLQYKVLKSGPEDGKTPLKTTKCSCHYRGKTINGDEFDSSFKRGKPTTFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDKQRSDLITPGAVLIFELELIEV 375 +G AFL NK K GV E PSGLQY+VLKSGPE G +P K+T CSCHY GK I G+EFDSS+KRG+PTTFAPNQVI GWTEAMQ+MKEGD WEL IPSELAYG + LI P +VLIFE+EL++V Sbjct: 34 DGAAFLAANKLKPGVVELPSGLQYRVLKSGPEGGPSPSKSTPCSCHYSGKNIQGEEFDSSYKRGQPTTFAPNQVISGWTEAMQLMKEGDKWELVIPSELAYGKSSPTPLIKPDSVLIFEMELVKV 158
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Match: A0A090N2Y7_OSTTA (Peptidylprolyl isomerase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N2Y7_OSTTA) HSP 1 Score: 185 bits (469), Expect = 1.330e-57 Identity = 85/125 (68.00%), Postives = 103/125 (82.40%), Query Frame = 1 Query: 1 EGKAFLEENKGKEGVTETPSGLQYKVLKSGPEDGKTPLKTTKCSCHYRGKTINGDEFDSSFKRGKPTTFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDKQRSDLITPGAVLIFELELIEV 375 +G A+LE NK KEGVT SGLQY+VLKSGP DG +P K+T+C CHY G+TI G+EFDSS+KRG+PTTFAPNQVI GWTEAMQ+MKEGD WEL IPSELAYG + LI P +VL+F++EL++V Sbjct: 35 DGLAYLEANKLKEGVTTLASGLQYRVLKSGPADGPSPSKSTRCKCHYSGRTIEGEEFDSSYKRGEPTTFAPNQVISGWTEAMQLMKEGDKWELVIPSELAYGRSSPTPLIKPDSVLVFDMELVKV 159
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Match: C1DZP4_MICCC (Peptidylprolyl isomerase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DZP4_MICCC) HSP 1 Score: 182 bits (461), Expect = 1.690e-56 Identity = 84/125 (67.20%), Postives = 102/125 (81.60%), Query Frame = 1 Query: 1 EGKAFLEENKGKEGVTETPSGLQYKVLKSGPEDGKTPLKTTKCSCHYRGKTINGDEFDSSFKRGKPTTFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDKQRSDLITPGAVLIFELELIEV 375 EG A+L+ NK K+GV E PSGLQY+VL GP G +P +T+C+CHYRG TI+G EFDSS+KRG+PT FAPNQVI GWTEAMQ+MKEGD WEL IPSE+AYGD+Q ITPGAVL+F LE+++V Sbjct: 27 EGVAYLQANKLKDGVIELPSGLQYRVLVEGPAGGPSPGPSTRCACHYRGTTIDGKEFDSSYKRGQPTEFAPNQVIAGWTEAMQLMKEGDKWELVIPSEIAYGDRQMGPDITPGAVLVFTLEIVKV 151
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Match: A0A7S0SJ29_9CHLO (Peptidylprolyl isomerase n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ29_9CHLO) HSP 1 Score: 179 bits (453), Expect = 4.650e-55 Identity = 84/124 (67.74%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 4 GKAFLEENKGKEGVTETPSGLQYKVLKSGPEDGKTPLKTTKCSCHYRGKTINGDEFDSSFKRGKPTTFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDKQRSDLITPGAVLIFELELIEV 375 GKA+LE NK KEGV ET SGLQY+V+ +G E G +P T+CSCHYRG TI+G EFDSS+ RG+PTTFAPNQVI GWTEAMQ+M EG WEL IPSE+AYGD+Q ITPGAVL+F LE+++V Sbjct: 44 GKAYLEANKLKEGVVETKSGLQYRVMVAGKEGGPSPKAGTRCSCHYRGTTIDGKEFDSSYSRGQPTTFAPNQVIAGWTEAMQIMTEGSKWELTIPSEIAYGDRQMGADITPGAVLVFTLEILKV 167
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Match: A0A6V1N267_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N267_HETAK) HSP 1 Score: 176 bits (445), Expect = 5.940e-54 Identity = 87/138 (63.04%), Postives = 103/138 (74.64%), Query Frame = 1 Query: 1 EGKAFLEENKGKEGVTETPSGLQYKVLKSGPE-DGKTPLKTTKCSCHYRGKTINGDEFDSSFKRGKPTTFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDKQRSDLITPGAVLIFELELIEVQG-PSAPRASEL 408 EG A+L+ENK KEGV E PSGLQYKV+KSG E +G T C CHYRG I+G EFDSS+KRG+P+ FAPNQVIKGWTEAMQ+M GD WEL IPSELAYGD+QR I PG VL+F+LE+++ G P +EL Sbjct: 24 EGLAYLKENKQKEGVVELPSGLQYKVIKSGAEVEGYKIQAGTSCECHYRGTLIDGTEFDSSYKRGQPSRFAPNQVIKGWTEAMQLMNVGDKWELTIPSELAYGDRQRGKFIRPGMVLLFDLEILDCNGYPGVAGEAEL 161
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Match: K8F319_9CHLO (Peptidylprolyl isomerase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F319_9CHLO) HSP 1 Score: 176 bits (445), Expect = 1.080e-53 Identity = 86/139 (61.87%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 4 GKAFLEENKGKEGVTETPSGLQYKVLKSGPEDGKTPLKTTKCSCHYRGKTIN---------------GDEFDSSFKRGKPTTFAPNQVIKGWTEAMQMMKEGDHWELYIPSELAYGDKQRSDLITPGAVLIFELELIEV 375 GKAFL EN KEGV PSGLQY+VLKSGP+ GK P T C CHYRG TI G+EFDSS+ RG+PT FAPNQVIKGWTEAMQ+M EGD WEL IPSELAYGD+ ITPG+VL+FE+E+++V Sbjct: 40 GKAFLTENALKEGVVSLPSGLQYRVLKSGPKGGKKPKVNTPCLCHYRGTTIEVRIYDFFAGTARVNRGEEFDSSYNRGEPTKFAPNQVIKGWTEAMQLMSEGDKWELVIPSELAYGDRAMGPQITPGSVLVFEMEIVKV 178 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9804.23901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9804.23901.1 >prot_P-canaliculata_contig9804.23901.1 ID=prot_P-canaliculata_contig9804.23901.1|Name=mRNA_P-canaliculata_contig9804.23901.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=137bp EGKAFLEENKGKEGVTETPSGLQYKVLKSGPEDGKTPLKTTKCSCHYRGKback to top mRNA from alignment at P-canaliculata_contig9804:3430..5171- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9804.23901.1 ID=mRNA_P-canaliculata_contig9804.23901.1|Name=mRNA_P-canaliculata_contig9804.23901.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1742bp|location=Sequence derived from alignment at P-canaliculata_contig9804:3430..5171- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9804:3430..5171- >mRNA_P-canaliculata_contig9804.23901.1 ID=mRNA_P-canaliculata_contig9804.23901.1|Name=mRNA_P-canaliculata_contig9804.23901.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=822bp|location=Sequence derived from alignment at P-canaliculata_contig9804:3430..5171- (Pelvetia canaliculata dioecious)back to top |