Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 849 |
| Cds size | 849 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817341.5357375-CDS-P-canaliculata_contig97919:218..1067 | 1622817341.5357375-CDS-P-canaliculata_contig97919:218..1067 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97919 219..1067 + |
| 1693495234.458675-CDS-P-canaliculata_contig97919:218..1067 | 1693495234.458675-CDS-P-canaliculata_contig97919:218..1067 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97919 219..1067 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97919.23889.1 >prot_P-canaliculata_contig97919.23889.1 ID=prot_P-canaliculata_contig97919.23889.1|Name=mRNA_P-canaliculata_contig97919.23889.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=283bp
DWSLGGSLRDFWQSKGSLVISDTKAIISDLTTGQLEKLVIKQSQVARLTS
LDGVWQLENPFRIENKRFYVEVLPFVNKLPSKLNIKFQSDIFLDILPKFY
RKIETSSGSVTAVANLYGSVSNPEIDANLRCSDSNLVSVGISSLRPSFEN
IECDILYRKGVLSISKLRSKKGLGTIDINGSLGISAKAATGYSGIKVTFD
GAKFIAPVKYFKYFDSVVSGNLYITGSKKPYQLAGSINVLRALATRDFDV
DQEIVNNIRRGSFNFKEVSETPLFNFNVDVNSN back to topmRNA from alignment at P-canaliculata_contig97919:219..1067+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig97919.23889.1 ID=mRNA_P-canaliculata_contig97919.23889.1|Name=mRNA_P-canaliculata_contig97919.23889.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=849bp|location=Sequence derived from alignment at P-canaliculata_contig97919:219..1067+ (Pelvetia canaliculata dioecious)
GATTGGAGTCTTGGCGGTTCGTTACGAGACTTTTGGCAGTCAAAAGGTTC
TCTGGTGATTTCAGATACGAAAGCCATTATTAGTGATTTAACGACAGGCC
AGCTAGAGAAGCTTGTTATTAAACAGAGCCAAGTAGCCAGGCTAACTTCT
TTAGATGGTGTCTGGCAGCTTGAAAATCCGTTTAGAATAGAGAATAAACG
CTTTTATGTTGAGGTCTTGCCTTTCGTAAACAAGCTACCTTCAAAACTTA
ACATCAAATTTCAGAGTGATATATTTCTAGATATTTTGCCGAAGTTCTAC
AGGAAGATTGAGACATCTAGTGGCTCTGTTACAGCCGTTGCCAATCTTTA
TGGCTCCGTCTCAAATCCCGAAATAGATGCCAACCTTAGATGCTCTGATT
CAAACTTAGTTAGTGTAGGGATTAGTAGTCTTCGACCTAGCTTTGAGAAT
ATTGAGTGTGATATTCTTTATAGAAAGGGAGTGCTATCGATTAGTAAACT
AAGATCTAAAAAAGGTCTTGGTACGATCGATATAAATGGCTCCTTAGGCA
TTAGTGCCAAAGCCGCGACGGGTTATTCTGGCATTAAGGTAACCTTCGAC
GGGGCTAAGTTTATCGCCCCGGTTAAGTATTTCAAGTATTTCGACAGCGT
GGTTTCAGGCAACCTCTACATTACGGGAAGTAAAAAACCCTATCAATTGG
CTGGGTCCATCAACGTACTGAGGGCTCTTGCAACCAGGGATTTTGACGTT
GACCAAGAGATTGTAAATAATATTAGGCGGGGTAGTTTTAACTTTAAAGA
GGTATCTGAGACGCCACTTTTTAACTTCAACGTCGATGTAAACTCCAAT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig97919:219..1067+ >mRNA_P-canaliculata_contig97919.23889.1 ID=mRNA_P-canaliculata_contig97919.23889.1|Name=mRNA_P-canaliculata_contig97919.23889.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1698bp|location=Sequence derived from alignment at P-canaliculata_contig97919:219..1067+ (Pelvetia canaliculata dioecious)
GATTGGAGTCTTGGCGGTTCGTTACGAGACTTTTGGCAGTCAAAAGGTTC
TCTGGTGATTTCAGATACGAAAGCCATTATTAGTGATTTAACGACAGGCC
AGCTAGAGAAGCTTGTTATTAAACAGAGCCAAGTAGCCAGGCTAACTTCT
TTAGATGGTGTCTGGCAGCTTGAAAATCCGTTTAGAATAGAGAATAAACG
CTTTTATGTTGAGGTCTTGCCTTTCGTAAACAAGCTACCTTCAAAACTTA
ACATCAAATTTCAGAGTGATATATTTCTAGATATTTTGCCGAAGTTCTAC
AGGAAGATTGAGACATCTAGTGGCTCTGTTACAGCCGTTGCCAATCTTTA
TGGCTCCGTCTCAAATCCCGAAATAGATGCCAACCTTAGATGCTCTGATT
CAAACTTAGTTAGTGTAGGGATTAGTAGTCTTCGACCTAGCTTTGAGAAT
ATTGAGTGTGATATTCTTTATAGAAAGGGAGTGCTATCGATTAGTAAACT
AAGATCTAAAAAAGGTCTTGGTACGATCGATATAAATGGCTCCTTAGGCA
TTAGTGCCAAAGCCGCGACGGGTTATTCTGGCATTAAGGTAACCTTCGAC
GGGGCTAAGTTTATCGCCCCGGTTAAGTATTTCAAGTATTTCGACAGCGT
GGTTTCAGGCAACCTCTACATTACGGGAAGTAAAAAACCCTATCAATTGG
CTGGGTCCATCAACGTACTGAGGGCTCTTGCAACCAGGGATTTTGACGTT
GACCAAGAGATTGTAAATAATATTAGGCGGGGTAGTTTTAACTTTAAAGA
GGTATCTGAGACGCCACTTTTTAACTTCAACGTCGATGTAAACTCCAATG
ATTGGAGTCTTGGCGGTTCGTTACGAGACTTTTGGCAGTCAAAAGGTTCT
CTGGTGATTTCAGATACGAAAGCCATTATTAGTGATTTAACGACAGGCCA
GCTAGAGAAGCTTGTTATTAAACAGAGCCAAGTAGCCAGGCTAACTTCTT
TAGATGGTGTCTGGCAGCTTGAAAATCCGTTTAGAATAGAGAATAAACGC
TTTTATGTTGAGGTCTTGCCTTTCGTAAACAAGCTACCTTCAAAACTTAA
CATCAAATTTCAGAGTGATATATTTCTAGATATTTTGCCGAAGTTCTACA
GGAAGATTGAGACATCTAGTGGCTCTGTTACAGCCGTTGCCAATCTTTAT
GGCTCCGTCTCAAATCCCGAAATAGATGCCAACCTTAGATGCTCTGATTC
AAACTTAGTTAGTGTAGGGATTAGTAGTCTTCGACCTAGCTTTGAGAATA
TTGAGTGTGATATTCTTTATAGAAAGGGAGTGCTATCGATTAGTAAACTA
AGATCTAAAAAAGGTCTTGGTACGATCGATATAAATGGCTCCTTAGGCAT
TAGTGCCAAAGCCGCGACGGGTTATTCTGGCATTAAGGTAACCTTCGACG
GGGCTAAGTTTATCGCCCCGGTTAAGTATTTCAAGTATTTCGACAGCGTG
GTTTCAGGCAACCTCTACATTACGGGAAGTAAAAAACCCTATCAATTGGC
TGGGTCCATCAACGTACTGAGGGCTCTTGCAACCAGGGATTTTGACGTTG
ACCAAGAGATTGTAAATAATATTAGGCGGGGTAGTTTTAACTTTAAAGAG
GTATCTGAGACGCCACTTTTTAACTTCAACGTCGATGTAAACTCCAAT back to top
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