mRNA_P-canaliculata_contig9780.23879.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 840 bits (2170), Expect = 6.130e-274 Identity = 498/1093 (45.56%), Postives = 612/1093 (55.99%), Query Frame = 1 Query: 1 FCFARQHDAESFNGSPPSQRLAVVVPTYHGDLSRTVSSLERWPTTVCSPFTRQKMDLVLYYAEGDEDNLAVTSAAHAISSSAGRCFANTRTVYANLDKEDNVYPKGPSAMFYKMYLDAAVRPQFAEYDALAVIEWDVLVASERTSKQLYHSAFDETPDFWVKGSRIEGPEFHSNANSKEMWNVLGHINGNAIYNNNDQAFKEYVRYTHARWKLDYPFDVALWLTVSDFPYSWPLWQQYSGKFVATNLISNVGREHINHDMVSDAIAAETLFIRGSYVDEGNIASIKATKNSRHALRDAERAPNVARGLQKWREEEXXXXXXXXXXXXXXRRDYGTEDRVLPPSDVDRCLSGCTYTSKDGTGGRVCDLSCESGELYGTLGCEARQGRLGTNCSACYNDVTKARRQDTPENRAIMHDERVLVSRPRFTPRTLPAHQTLPARYLPPTDNILMTASATHWSLSQLHTMRAASLSLMPRAPPMWHVGYKSGEKRRSGGRSRSGRLSRNSAGTTKWKTLEKWRRDYGTEDHGIPP--------SVVDRCLSGCTNTSKDGTRGRVCDLSCEEGEPYGTLGCEARQGRFGTNCRACYNDVTKARRQDTPENRAIMCDTLEPVPTAYDARSLAVVDAETAPNVARGLQ----------------KWREEEXXXXXXXXXXXXXXRKDYGTEDLSAISLHH-------PPYTILKHGIPPSDVGRCLSGCTYTSKDGIRGRVCDLSCEDGEPHGTLGCEARQGRFGINCRACYNDATKARRQDTLENRAIMCDTLEPVPTAYDGRSLAVVDAETALNMARGLQKRREEXXXXXXXXXXXXXXXRKDYGTEDLSAISLHHPPYIILKHGIPPSDVGRCLSGCTYTSKDGTRGRVCDLSCEDGEPYGTLGCEARQGRIGTNCRACYNDVTKVRRQDTLENRAIMCDTLEPVPTAYDARSLTVVDTESAPNVARGLQ----------------KWREEEXXXXXXXXXXXXXXRRGYGTEDSVMRPFGVVGRCLSGCTYTSKDSTRGRVCDLACESGEPYGTLGCEARQGRYGANCRACYNDVTKPRRHDTPENRAIMCDTLEPV 3138 F FA+ HD + P QRL VVVP Y GDL+R VSSLERWP CSP T + DLVLYYAE E++ A SA +ISS+AGRCF+ TR VYANL +ED++YP+GPS MFY M+LD +VR + YDAL++IEWDVLVAS+ + ++LYH+AF +FWVKGS +EG FHSNA++ EMW+VLGHINGNAIYNN+D AF EYV YT ARW ++P+DVALW+T+SDFPYSWPL+Q+YS KFV TNLIS+VG EH+NHD VSDA+A +TLFI GS VDEGN+AS +AT+ A+ A + + KW+ +E XXXXXXXX ED SD + C+ GC YTSKDGT GRVCD +C S +YGTLGC A+ G+ G +C ACYND KAR+QDTP NRAIM ++ V + R PA ++ P +L+ ++H + + KW+ EKW+ + S + C+ GC TSKDGTRGRVCD +C YGTLGC A+ G++G +CRACYND KAR+QDTP NRAIMC T PV Y R L D VAR L+ KWR +E ++ S + H RC+ GC YTSKDG RGRVCD +C +GTLGC A+ G++G +CRACYND KAR+QDT NRAIMC T PV GR L D L +AR L+ +++ ++ + + K SD C+ GC YTSKDGTRGRVCD +C YGTLGC A+ G+ G +CRACYND K R+QDT NRAIMC T PV Y R LT D + VAR L+ KWR +E XXXXXXXX EDS C+ GC YTSKD TRGRVCD C S YGTLGC A+ G+YGA+CRACYND K R+ DTP NRAIMC T PV Sbjct: 16 FTFAQDHDLKD----PQQQRLGVVVPAYDGDLARAVSSLERWPAK-CSPLTLENADLVLYYAE--EESSATASALESISSTAGRCFSRTRIVYANLAEEDDIYPQGPSVMFYNMFLDESVRSSLSGYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWHVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAVAGKTLFIHGSSVDEGNVASYEATEGDA-AVDVATSQRQLTEDVPKWQAQEKWRNTSXXXXXXXXXXKKQYEDS----SDEEGCMDGCEYTSKDGTRGRVCDSNCSSPNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTKMPVD--VYGRRLTPADESNP---------LLVARDLEALQKDEVHRQLSEDVP--------------------------------------KWRAQEKWKNNTXXXXXXXXXXXKQYEDSSDEEGCMDGCEYTSKDGTRGRVCDSNCSSSNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTKMPV-DVY-GRRLTTADEVNPLLVARDLEALQKDEEHRQLSEDVPKWRAQEKWKNNTVPKCVFPSEDVEAQPEVEGSSTRTLRMRKDCSSFLFFTHD-------RCMDGCEYTSKDGTRGRVCDSNCSSSNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTKMPVDVY--GRRLTPADESNPLLVARDLEALQKDEVHRQLSEDVPKWRAQEKWKN---NTXXXXXXXXXXXKQYEDSSDEEGCMDGCEYTSKDGTRGRVCDSNCSSSNVYGTLGCGAKSGKYGADCRACYNDDEKARKQDTPGNRAIMCSTKMPVD-VY-GRRLTPADESNPLLVARDLEALQKDEVHRQLSEDVPKWRAQEKWKNNTXXXXXXXXXXXKQYEDSSDEE-----GCMDGCEYTSKDGTRGRVCDSNCSSPNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNRAIMCSTKMPV 1026
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI) HSP 1 Score: 776 bits (2005), Expect = 1.840e-253 Identity = 495/1245 (39.76%), Postives = 622/1245 (49.96%), Query Frame = 1 Query: 7 FARQHDAESFNGSPPSQRLAVVVPTYHGDLSRTVSSLERWPTTVCSPFTRQKMDLVLYYAEGDEDNLAVTSAAHAISSSAGRCFANTRTVYANLDKEDNVYPKGPSAMFYKMYLDAAVRPQFAEYDALAVIEWDVLVASERTSKQLYHSAFDETPDFWVKGSRIEGPEFHSNANSKEMWNVLGHINGNAIYNNNDQAFKEYVRYTHARWKLDYPFDVALWLTVSDFPYSWPLWQQYSGKFVATNLISNVGREHINHDMVSDAIAAETLFIRGSYVDEGNIASIKATKNSRHALRDAE---RAPNVARGLQKWREEEXXXXXXXXXXXXXXRRDYGTEDRVLPPSDVDR------------CLSGCTYTSKDGTGGRVCDLSCESGELYGTLGCEARQGRLGTNCSACYNDVTKARRQDTPENRAIMHDERVLVSRPRFTPRTLPAHQTLPARYLPPTDNILMTASATHWSLSQLHTMRAASLSLMPRAPPMWHVGYKSGEKRRSGGRSRSGRLSRNSAGTTKWKTLEKWRRDYGTEDHGIPPSVVDR------------------------CLSGCTNTSKDGTRGRVCDLSCEEGEPYGTLGCEARQGRFGTNCRACYNDVTKARRQDTPENRAIMCDTLEPVPTAYDARSLAVVDAETAP-NVARGLQKWRE--------EEXXXXXXXXXXXXXXRKDYGTEDLSAISLHHPPYTILKHGIPPSDVGR------------CLSGCTYTSKDGIRGRVCDLSCEDGEPHGTLGCEARQGRFGINCRACYNDATKARRQDTLENRAIMCDTLEPVPTAYDGRSLAVVDAETALNMARGLQKRRE--------EXXXXXXXXXXXXXXXRKDYGTED------------LSAISLHHPPYIILKHGIPPSDVGRCLSGCTYTSKDGTRGRVCDLSCEDGEPYGTLGCEARQGRIGTNCRACYNDVTKVRRQDTLENRAIMCDTLEPVPTAYDARSLTVVDTESAPNVARGLQKWRE-------EEXXXXXXXXXXXXXXRRGYGT--EDSVMRPFGVV-------------------------GRCLSGCTYTSKDSTRGRVCDLACESGEPYGTLGCEARQGRYGANCRACYNDVTKPRRHDTPENRAIMCDTLEPVLFVYNIRSLASAFGKGSAVDRARGLRRSQNQEQNDGPDDGNVD-------ALIQEAVLYPYTHDLVRRDLCAFVAGFVHEVALVEVS 3378 FA+ H+ +S QRL V+VP Y GDL+R VSSLERWP CSP T + DLVLYYAE E + A SA +ISS+AGRCF+ TR VYANL +ED++YPKGPS MFYKM+LD VR +EYDAL+++EWDVLVAS+ + ++LYH+AF +FWVKGS +EG FHS+A + EMW VLGHINGNAIYNN+D AF EYV YT ARW ++P+DVALW+T+SDFPYSWPL+Q+YS KFV TNLIS VG EH++HD VSDA+A +TLFI GS V++GN+AS +A ++ A D R + KW+ +E XXXX C S C YTS+DGT GRVCD +C + ++YGT GC A+QG G C AC+NDV KAR+QDTPENR+IM + V + R ++ P R + + AS+ SGE+ R SG T KWK+ EKWR C S C TS+DGTRGRVCD +C + YGT GC A+QG +G CRAC+NDV KAR+QDTPENR+I+C PV Y R A D E+ P VA L+ +E EE K ++D S C S C YTS+DG RGR + +GT GC A+QG +G CRAC+ND KAR+QDT ENR+IMC PV Y GR L D L +AR L+ +E E K ++D G C S C YTS+DGTRGRVCD +C + YGT GC A+QG G CRAC+NDV K R+QDT ENR+IMC T PV Y R LT D V R L+ +E EE + + T +DS G C S C YTS+D TRGRVCD C + + YGT GC A+QG YG CRAC+NDV K R+ DTPENR+IMC T+ PV VY R + V + + S+ + + + NVD + +EA PY+ DL RR+LCAFV G E A+ +V+ Sbjct: 19 FAQDHNQDS------QQRLGVIVPAYDGDLARAVSSLERWPVK-CSPLTLKNADLVLYYAE--EASSATASALDSISSTAGRCFSRTRVVYANLAEEDDIYPKGPSVMFYKMFLDENVRSSLSEYDALSIVEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISYVGYEHVSHDTVSDAVAGKTLFIHGSSVEDGNVASYEAVASTATATVDVAKQTRGRKLTGSTPKWKTQEKWRSSKDDSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSTCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIMCSTKRPVE--GYGRRLTADDESDPLRVARDLETLQEDASSP------------------------------SGEEEH---RQLSG-------STPKWKSQEKWRTSKDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSSCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIICSNKRPV-EGYGRRLTA--DDESDPLRVAHSLETLQEDASSPSGEEEHRQLSGSTPKWKSQEKWRTSKDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACSSSCEYTSRDGTRGRXXXXXXXXPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIMCSNKRPVE-GY-GRRLTANDESDPLRVARSLETLQEDASSPLEEEEHRQLSGSTPKWKSQEKWRTSKDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSSCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIMCSTKRPVE-GY-GRRLTADDESDPLRVGRSLETLQEDASSPSGEEEHRQLSGSTPKWKSQEKWRTSKDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACSSTCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRSIMCSTVMPV-DVYGRRLTPDDGSRPLRVAKIFSVEDSEEEADDVEEELANVDVDREDVISFFEEAAERPYSQDLKRRNLCAFVGGRAGEEAMWDVT 1204
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE) HSP 1 Score: 649 bits (1674), Expect = 9.090e-209 Identity = 393/817 (48.10%), Postives = 481/817 (58.87%), Query Frame = 1 Query: 1 FCFARQHDAESFNGSPPSQRLAVVVPTYHGDLSRTVSSLERWPTTVCSPFTRQKMDLVLYYAEGDEDNLAVTSAAHAISSSAGRCFANTRTVYANLDKEDNVYPKGPSAMFYKMYLDAAVRPQFAEYDALAVIEWDVLVASERTSKQLYHSAFDETPDFWVKGSRIEGPEFHSNANSKEMWNVLGHINGNAIYNNNDQAFKEYVRYTHARWKLDYPFDVALWLTVSDFPYSWPLWQQYSGKFVATNLISNVGREHINHDMVSDAIAAETLFIRGSYVDEGNIASIKATKNSRHALRDAERAPNVARGLQKWREEEXXXXXXXXXXXXXXRRDYGTEDRVLPPS-------------DVDRCLSGCTYTSKDGTGGRVCDLSCESGELYGTLGCEARQGRLGTNCSACYNDVTKARRQDTPENRAIMHDERVLVSRPRFTPRTLPAHQTLPARYLPPTDNILMTASATHWSLSQLHTMRAASLSLMPRAPPMWHVGYKSGEKRRSGGRSRSGRLSRNSAGTTKWKTLEKWRRDYGTE-----------DHGIPP--------------SVVDRCLSGCTNTSKDGTRGRVCDLSCEEGEPYGTLGCEARQGRFGTNCRACYNDVTKARRQDTPENRAIMCDTLEPVPTAYDARSLAVVDAETAPNVARGLQ---------------------KWREEEXXXXXXXXXXXXXXRKDYGTEDLSAISLHHPPYTILKHGIPPSDVGRCLSGCTYTSKDGIRGRVCDLSCEDGEPHGTLGCEARQGRFGINCRACYNDATKARRQDTLENRAIMCDTLEPV 2274 F FAR HD + Q+L VVVPTY GDL+R VSSLERWP CSP T + DLVLYYAE E++ A SA +ISS+AGRCFA TR V+ANL +ED++YP+GPS MFY M+LD VR +EYDAL++IEWDVLVAS+ + ++LYH+AF +FWVKGS +EG FHSNA++ EMW +LGHINGNAIYNN+D AF EYV YT ARW ++P+DVALW+T+SDFPYSWPL+Q+YS KFV TNLIS+VG EH+NHD VSDAIA TLFI GS VDEGN+AS +AT+ A + ++ + KW+E+E XXXXXXXXX T+D V D + C++GC YTSKDGT GRVCD +C + YGTLGC A+ G+ G +C ACYNDV KAR+QDTP NRAIM ++ V R L A ++ P L D ++ A+ S+ + + + KWK EKW+ D G+ S + CL GC TSKDGTRGRVCD +C + YGTLGC A+ G++G +CRACYNDV KAR+QDTP NRAIMC T PV Y R L VD VARGL+ KW+ XXXXXXXXXXXXXX T+D P + G CL GC YTSKDG RGRVCD +C + +GTLGC A+ G++G +CRACYND KAR QDT NRAIMC T EPV Sbjct: 16 FTFARDHDYQD------PQQLGVVVPTYKGDLARAVSSLERWPAK-CSPLTLENADLVLYYAE--EESSATASALDSISSTAGRCFARTRIVFANLAEEDDIYPQGPSVMFYNMFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWQLLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAIAGNTLFIHGSSVDEGNVASYEATEGDASVDVTATQR-HLTEDVPKWKEQEKWKTSXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSPDEEGCMNGCEYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARKQDTPANRAIMCSTKMPVD---VYDRRLTAVESDPL--LVARDLEVLQKDASSPSVEEHRQL---------------------------------------TEDVPKWKEQEKWKXXXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSSDEEGCLDGCEYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARKQDTPANRAIMCSTKMPV-DVY-GRRLTPVDESDPLLVARGLEALQEDASSPPQEHRRLTEDVPKWKXXXXXXXXXXXXXXXXXXXXXETDD-GVXXXXXXXXXXXXXXXSPDEEG-CLDGCDYTSKDGTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARTQDTPANRAIMCSTREPV 774
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI) HSP 1 Score: 632 bits (1630), Expect = 6.830e-198 Identity = 450/1260 (35.71%), Postives = 590/1260 (46.83%), Query Frame = 1 Query: 43 SPPSQRLAVVVPTYHGDLSRTVSSLERWPTTVCSPFTRQKMDLVLYYAEGDEDNLAVTSAAHAISSSAGRCFANTRTVYANLDKEDNVYPKGPSAMFYKMYLDAAVRPQFAEYDALAVIEWDVLVASERTSKQLYHSAFDETPDFWVKGSRIEGPEFHSNANSKEMWNVLGHINGNAIYNNNDQAFKEYVRYTHARWKLDYPFDVALWLTVSDFPYSWPLWQQYSGKFVATNLISNVGREHINHDMVSDAIAAETLFIRGSYVDEGNIASIKATKNSRHALRDAERAPNVARGL---------QKWREEEXXXXXXXXXXXXXXRRDYGTEDRVLPPSDVDRCLSGCTYTSKDGTGGRVCDLSCESGELYGTL--------------GCEARQGRLGTNCSACYNDVTKARRQDTPENRAIMHD--ERVLVSRPRFTPRTLPAHQTLPARYLPPTDNILMTASATHWSL-SQLHTMRAASLSLMPR--APPMWHVGYKSGEKRRSGGRSRSGRLSRNSAGTTKWKTLEKWRRDYGTEDHGIPPSVVDRCLSGCTNTSKDGTRGRVCDLSCEEGEPYGTLGCEARQGRFGTNCRACYNDVTKARRQDTPENRAIMCDTLEPVPTAYDARSLAVVDAETAPNVARGLQKWREEEXXXXXXXXXXXXXXRK------------------------------------DYGTEDLSAISLHHPPYTILKHGIPPSDVGRCLSGCTYTSKDGIRGRVCDLSCEDGEPHGTLGCEARQGRFGINCRACYNDATKARRQDTLENRAIMCDTLEPVPTAYDGRSLAVVDAETALNMARGLQKRREEXXXXXXXXXXXXXXX-------RKDYGTEDLSAISLHHPPYIILKHGIPPSDVGRCLSGCTYTSKDGTRGRVCDLSCEDGEPYGTL---------------------GCEARQGRIGTNCRACYNDVTKVRRQDTLENRAIMCDTLEPVPTAYDARSLTVVDTESAPNVARGLQ-----------------------------KWREEEXXXXXXXXXXXXXXRRGY-------GTE-------------DSVMRPFGVVGRCLSGCTYTSKDSTRGRVCDLACESGEPYGTLGCEARQGRYGANCRACYNDVTKPRRHDTPENRAIMCDTLEPVLFVYNIRSLASAFGKGSAVDRARGLRRSQNQEQNDGPDDGNVDA-------LIQEAVLYPYTHDLVRRDLCAFVAGFVHEVALVEVS 3378 +P QRL VVVP Y GDL+R VSSLERWP CSP T + DLVLYYAE E++ A SA +IS++AGRCF+ TR VYANL +ED++YP+GPS MFY M+LD +VR +EYDAL++IEWDVLVAS+ + ++LYH+AF +FWVKGS +EG FHS A + EMW VLGHINGNAIYNN+D AF EYV YT +RW ++P+DVALW+T+SDFPYSWPL+Q+YS KFV TNLIS+VG EH+ HDMVSDA+A +TLFI GS V+EGN+AS +A + A+ + + A +R L +KWR XXXXXXXXXX GC A+QG G +C CYN+V +A +QD+P+NRAIM + V V R R + A ++ P+R + + AS+ + S + + L+ +P+ A W G S R D + P C S CT TSKDGT+GRVCD +C YGT GC A+QG +G +CR CYN+V +A +QD+P+NRAIMC T++PV R ++ VD A VAR L+ +EE R G+E SD G C S CTYTSKDG +GRV GC A+QG +G +CR CYND +A +QD+ +NRAIMC T+ PV AY GR ++ + +AR L+ +E+ + + T + I GC A+QG G +CR CYN+V + +QD+ +NRAIMC T++PV R ++ D A VAR L+ KW+ E XXXXX G+E DS C S CTYTSKD T+GRVC YGT GC A+QG YGA+CR CYN+V + + D+P+NRAIMC T+ PV VY R SA D + LR ++ E D ++ +VD +EA Y+ DL R +LCAFV G E A+ EV+ Sbjct: 28 APRQQRLGVVVPAYKGDLARAVSSLERWPAK-CSPLTLENADLVLYYAE--EESSATASALESISTTAGRCFSRTRIVYANLAQEDDIYPRGPSVMFYNMFLDESVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRSRWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGFEHVGHDMVSDAVAGQTLFIHGSSVEEGNVASFRAAAAAAVAVEEPQPAQQRSRKLTSVPKWKTAEKWRNSNGDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCNAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVKPVDVYRRRMSA----ADESEPSRVARSLEALNEEASSPSEEVQSAVKVNQDRKLTSVPKWKANEKWRTANDDGXXXXXXXXXXXXNKXXXSEXXXXXXXXXXXRNDSSDDSSSSDPG----CSSRCTYTSKDGTKGRVCDSNCSSPNVYGTKGCNAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVKPVDVYR--RRMSAVDESEASRVARSLEVLKEEASSPSEEVESAVKVTRDRKLTSVPKWKANEKWRTANDDGXXXXXXXXXXXXXXXXGSEXXXXXXXXXXXXXXSSDDDSSSDAG-CSSRCTYTSKDGTKGRVXXXXXXXXXXXXXXGCNAKQGIYGADCRVCYNDLDRALKQDSPDNRAIMCSTVMPVD-AY-GRRMSAAEEGLPSFVARSLEALKEDASSLSWKASLDRKLTSVPKWKAEEKWRTANDDGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVKPVDVYR--RRMSAADESEASRVARSLEALKEEASSPSEEVESAVKVNQYRKLTSVPKWKANEKWRTANDDGXXXXXXXXXXXXXXXXGSEXXXXXXXXXXXXNDSSDDSSSSDAACSSRCTYTSKDGTKGRVCXXXXXXXNVYGTKGCGAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTVMPV-DVYGRRL--------SASDESDPLRVAKMIEAEDVGEELSVDVDREQAIRFFEEAAERSYSQDLKRHNLCAFVGGRAGEEAMWEVT 1260
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Match: D7FR80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR80_ECTSI) HSP 1 Score: 456 bits (1174), Expect = 3.020e-137 Identity = 293/707 (41.44%), Postives = 369/707 (52.19%), Query Frame = 1 Query: 157 QKMDLVLYYAEGDEDNLAVTSAAHAISSSAGRCFANTRTVYANLDKEDNVYPKGPSAMFYKMYLDAAVRPQFAEYDALAVIEWDVLVASERTSKQLYHSAFDETPDFWVKGSRIEGPEFHSNANSKEMWNVLGHINGNAIYNNNDQAFKEYVRYTHARWKLDYPFDVALWLTVSDFPYSWPLWQQYSGKFVATNLISNVGREHINHDMVSDAIAAETLFIRGSYVDEGNIASIKATKNSRHALRDAERAPNVARGLQKWREEEXXXXXXXXXXXXXXRRDYGTEDRVLPPSDVDRCLSGCTYTSKDGTGGRVCDLSCESGELYGTLGCEARQGRLGTNCSACYNDVTKARRQDTPENRAIMHDERVLVSRPRFTPRTLPAHQTLPARYLPPTDNILMTASATHWSLSQLHTMRAASLSLMPRAPPMWHVGYKSGEKRRSGGRSRSGRLSRNSAGTTKWKTLEKWRR-DYGTEDHGIPPSVVDRCLSGCTNTSKDGTRGRVCDLSCEEGEPYGTLGCEARQGRFGTNCRACYNDVTKARRQDTPENRAIMCDTLEPVPTAYDARSLAVVDAETAPNVARGLQKWREEEXXXXXXXXXXXXXXRKDYGTEDLSAISLHHPPYTILKHGIPPSDVGRCLSGCTYTSKDGIRGRVCDLSCEDGEPHGTLGCEARQGRFGINCRACYNDATKARRQDTLENRAIMCDTLEPV 2274 + +DLVLYYAEG+ED+ AV +AA I+++AGRCFA+ RTVYA+L++E++VYPKGPS MF+KM+LD V + +EYDALA+IEWDVLVA++R+ ++LYH+AF +FWVKGS +EG FHS+A+ +MW V+GHINGNAIYNNND AF EYV YT AR+K YP+DVALWLT+SDFPYSWPL+Q+YS KFV TNLIS VG EH++HD VSDAIA +TLFI GS VDEG+ ASIK T XXXXXXXXXXXX GT + RL ++ R +TPE E V+ TP +P AS L +T L + R+ W GE R L +W+T KW+R DYG+ D C++ C +TS DGTRGRVCD +CE G PYG LGC A+ G++G +CR C+NDV A +DTP+NRAIMC T+ PV S + ARG+++ R T G PSD C C YTS DG GR DG P+G LGC+ G++G NCR C+ND A + D +NRAIMCDTL PV Sbjct: 4 KNVDLVLYYAEGEEDSEAVGAAAEVIAATAGRCFADVRTVYAHLEQEEDVYPKGPSVMFFKMFLDEGVHAELSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSADVTDMWRVMGHINGNAIYNNNDPAFAEYVDYTRARFKYRYPYDVALWLTISDFPYSWPLYQRYSRKFVTTNLISYVGYEHVDHDTVSDAIAGQTLFIHGSRVDEGSGASIKETA---------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSESASEPSRLRMRSERPFS------RLETPERHVAARREEEEVA---ATPEAVPQE-----------------ASPARRRLKGGNT----GLPIERRSFRRW------GEDRE---------LEEG----PEWQTERKWKRFDYGS----------DSCMAKCEHTSNDGTRGRVCDSTCENGHPYGDLGCSAKGGKYGPHCRTCFNDVDTALMRDTPKNRAIMCSTMLPVGARTSPESARPAPKKNDVPAARGVKQGRRVLR--------------------------------TTSSAGDEPSD---CDDSCEYTSNDGTTGRXXXXXXXDGNPYGFLGCDTEDGQYGGNCRYCFNDVDSALKFDAQDNRAIMCDTLLPV 589
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Match: A0A6H5JHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL7_9PHAE) HSP 1 Score: 365 bits (936), Expect = 6.830e-106 Identity = 245/723 (33.89%), Postives = 306/723 (42.32%), Query Frame = 1 Query: 304 VYPKGPSAMFYKMYLDAAVRPQFAEYDALAVIEWDVLVASERTSKQLYHSAFDETPDFWVKGSRIEGPEFHSNANSKEMWNVLGHINGNAIYNNNDQAFKEYVRYTHARWKLDYPFDVALWLTVSDFPYSWPLWQQYSGKFVATNLISNVGREHINHDMVSDAIAAETLFIRGSYVDEGNIASIKATKNSRHALRDAE---RAPNVARGLQKWREEEXXXXXXXXXXXXXXRRDYGTEDRVLPPSDVDR------------CLSGCTYTSKDGTGGRVCDLSCESGELYGTLGCEARQGRLGTNCSACYNDVTKARRQDTPENRAIMHDERVLVSRPRFTPRTLPAHQTLPARYLPPTDNILMTASATHWSLSQLHTMRAASLSLMPRAPPMWHVGYKSGEKRRSGGRSRSGRLSRNSAGTTKWKTLEKWRRDYGTEDHGIPPSVVDRCLSGCTNTSKDGTRGRVCDLSCEEGEPYGTLGCEARQGRFGTNCRACYNDVTKARRQDTPENRAIMCDTLEPVP------TAYD-------ARSLAVVDAETAPNVA--------------RGLQKWR--EEEXXXXXXXXXXXXXXRKDYGTEDLSAISLHHPPYTILKHGIPPSDVGRCLSGCTYTSKDGIRGRVCDLSCEDGEPHGTLGCEARQGRFGINCRACYNDATKARRQDTLENRAIMCDTLEPVPTAYDGRSLAVVDAETALNMAR 2340 +YPKGPS MFY M+LD VR +EYDAL+ +EWDVLVAS+ + ++LYH+A +FWVKGS++EG FHS+A + EMW VLGHINGNAIYNN+D AF EYV YT ARW ++P+DVALW+T+SDFPYSWPL+Q+YS KF+ TNL+ +GN+AS A ++ A D R ++ KW+ +E XXXX C S C YTS+DGT GRVCD +C + ++YGT C A+QG G AC+NDV KAR+QDTPENRAIM C S C TS+DGTRGRVCD +C + YGT C A+QG +G RAC+NDV KAR QDTPENRAIMC T PV T D ARSL + +T+ + R +KWR +++ R P YTS GC A+QG +G RAC+ND KAR+QDT ENRAIMC T+ PV GR L D L A+ Sbjct: 1 MYPKGPSVMFYNMFLDENVRSSLSEYDALSTVEWDVLVASDNSFEELYHAALRVNEEFWVKGSKLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFIVTNLVG-----------------------------DGNVASKAAAASTATATADVAKQTRGRKLSGNTPKWKTQEKWRTSKDDSLXXXXXXXXXXXXXXXXXXXXXXXXXWKNKFSDGACSSSCEYTSRDGTRGRVCDANCSTPDVYGTRECNAKQGTYGEERRACFNDVDKARKQDTPENRAIM-------------------------------------------------------------------------------------------------------------------------CSSSCEYTSRDGTRGRVCDANCSTPDVYGTRECNAKQGTYGEERRACFNDVDKAREQDTPENRAIMCSTKRPVEGYGRRLTPDDESDPLRIARSLETLQEDTSSPLQEQEHRQLSGSTPKRRSQEKWRTRKDDSIPKCVFRSGGSASRWKXXXXXXXXXXDKAPKXXXXXXXXXXXXXXXXXXXXXYTSXXXXXXXXXXXXXXXXXXXXXRGCNAKQGTYGEERRACFNDVDKARKQDTPENRAIMCSTVMPVDVY--GRRLTPDDGSRPLREAK 571
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Match: A0A6H5JSN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN3_9PHAE) HSP 1 Score: 367 bits (942), Expect = 2.790e-103 Identity = 177/297 (59.60%), Postives = 226/297 (76.09%), Query Frame = 1 Query: 55 QRLAVVVPTYHGDLSRTVSSLERWPTTVCSPFTRQKMDLVLYYAEGDEDNLAVTSAAHAISSSAGRCFANTRTVYANLDKEDNVYPKGPSAMFYKMYLDAAVRPQFAEYDALAVIEWDVLVASERTSKQLYHSAFDETPDFWVKGSRIEGPEFHSNANSKEMWNVLGHINGNAIYNNNDQAFKEYVRYTHARWKLDYPFDVALWLTVSDFPYSWPLWQQYSGKFVATNLISNVGREHINHDMVSDAIAAETLFIRGSYVDEGNIASIKATKNSRHALRDAERAPNVARGLQKWREEE 945 QRLAVVVP Y GDL R V+SL RWPT CS T++ +DLVLYYAEG+ED V +A A++ SAGRCFA T TVYA+L +ED+VYP+GPS MFYKM+LD +R F+EYDALA++EWDVLVA++R+ ++LYH+AF +FWVKGS +EG FHS++ +MW+VLGHINGNAIYNN DQAF EYV YT +RW+ +YP+DVALWLT+SDFPYSWPL+Q++S KFV TNLI+ VG+ H++H V+DAIA +TLFI G VDEG+ S++ N + R A V R +Q +E E Sbjct: 39 QRLAVVVPAYKGDLDRAVASLGRWPTD-CSSVTQRNVDLVLYYAEGEEDAAPVDAATTALAESAGRCFAKTLTVYAHLSEEDDVYPRGPSVMFYKMFLDERIRSNFSEYDALAILEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNKDQAFVEYVDYTRSRWEYNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHGKNVDEGSNLSVQKV-NEANGTRKNGGASKVVRKVQNRKENE 333
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Match: A0A6H5JMG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG7_9PHAE) HSP 1 Score: 321 bits (822), Expect = 3.110e-96 Identity = 149/229 (65.07%), Postives = 189/229 (82.53%), Query Frame = 1 Query: 58 RLAVVVPTYHGDLSRTVSSLERWPTTVCSPFTRQKMDLVLYYAEGDEDNLAVTSAAHAISSSAGRCFANTRTVYANLDKEDNVYPKGPSAMFYKMYLDAAVRPQFAEYDALAVIEWDVLVASERTSKQLYHSAFDETPDFWVKGSRIEGPEFHSNANSKEMWNVLGHINGNAIYNNNDQAFKEYVRYTHARWKLDYPFDVALWLTVSDFPYSWPLWQQYSGKFVATNLI 744 +LAVVVP Y+GDL R V+SL RWPT CSP T Q +DLVLYYAEG+ED+ AV +A I+++AGRCFA RTVYA+L++++++YPKGPS MF+KM+LD VR + +EYDALA+IEWDVLVA++R+ ++LYH+AF +FWVKGS +EG FHS+A+ +MW V+GHINGNAIYNNND AF EYV YT AR+K YP+DVALWLT+SDFPYSWPL+Q+YS KFV TNL+ Sbjct: 56 KLAVVVPAYNGDLDRAVASLGRWPTD-CSPLTVQYVDLVLYYAEGEEDSEAVGAAVEMIAATAGRCFAEVRTVYAHLEQDEDMYPKGPSVMFFKMFLDEGVRAELSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSADVTDMWRVMGHINGNAIYNNNDPAFAEYVDYTRARFKYRYPYDVALWLTISDFPYSWPLYQRYSRKFVTTNLV 283
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Match: A0A6H5L4M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE) HSP 1 Score: 296 bits (757), Expect = 3.250e-81 Identity = 198/558 (35.48%), Postives = 252/558 (45.16%), Query Frame = 1 Query: 328 MFYKMYLDAAVRPQFAEYDALAVIEWDVLVASERTSKQLYHSAFDETPDFWVKGSRIEGPEFHSNANSKEMWNVLGHINGNAIYNNNDQAFKEYVRYTHARWKLDYPFDVALWLTVSDFPYSWPLWQQYSGKFVATNLISNVGREHINHDMVSDAIAAETLFIRGSYVDEGNIASIKATKNSRHALRDAERAPNVARGLQ---KWREEEXXXXXXXXXXXXXXRRDYGTEDRVLPPSDVDRCLSGCTYTSKDGTGGRVCDLSCESGELYGTL--------------------GCEARQGRLGTNCSACYNDVTKARRQDTPENRAIMHDERVLVSRPRFTPRTLPAHQTLPARYLPPTDNILMTASATHWSLSQLHTMRAASLSLMPRAPPMW-HVGYKSGEKRRSGGRSRSGRLSRNSAGTTKWKTLEKWRRDYGTEDHGIPP------------------------------------SVVDRCLSGCTNTSKDGTRGRVCDLSCEEGEPYGTLGCEARQGRFGTNCRACYNDVTKARRQDTPENRAIMCDTLEPV 1821 MFY M+LD VR +EYDAL++IEWDVLVAS+ + ++LYH+AF +FWVKGS +EG FHS A + EMW VLGHINGNAIYNN+D AF EYV YT ARW ++P+DVALW+T+SDFPYSWPL+Q+YS KFV TNL+ GN+AS +AT + AL+ E A +R L KW++ E XXXX GC A+QG G +C CYN V KA +QD+P+NRAIM+D V+ S + P D SA + R A+L +P + K + R+ +WK EKWR D GI S C S CT TSKDGT+GRVCD +C YGT GC A+QG +G +CR CYN+V +A +QD+P+NRAIMC T+ PV Sbjct: 1 MFYNMFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLV-------------------------------GNVASFRATAAAAVALKKPEPAQQSSRKLTSVPKWKKAEKWRNGNDDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCNAKQGIYGADCRVCYNSVDKALKQDSPDNRAIMYDAVVVCST------------------VMPVDVYHRRMSAADEGEASRVARRLAALKEDASSPAEEVELAVKVDQDRKL-------------TSVPRWKAKEKWRT---ANDDGIXXXXXXXXXXXXKXXGGEXXXXXXXXXXXXNGSSDDSSSSDPGCSSRCTYTSKDGTKGRVCDSNCSTPNVYGTKGCGAKQGIYGADCRVCYNNVDRALKQDSPDNRAIMCSTMMPV 493
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Match: D7FI38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI38_ECTSI) HSP 1 Score: 290 bits (741), Expect = 1.490e-80 Identity = 149/296 (50.34%), Postives = 190/296 (64.19%), Query Frame = 1 Query: 358 VRPQFAEYDALAVIEWDVLVASERTSKQLYHSAFDETPDFWVKGSRIEGPEFHSNANSKEMWNVLGHINGNAIYNNNDQAFKEYVRYTHARWKLDYPFDVALWLTVSDFPYSWPLWQQYSGKFVATNLISNVGREHINHDMVSDAIAAETLFIRGSYVDEGNIASIKATKN--SRHALRDAERAPNVARGLQKWREEEXXXXXXXXXXXXXXRRDYGTEDRVLPPSDVDRCLSGCTYTSKDGTGGRVCDLSCESGELYGTLGCEARQGRLGTNCSACYNDVTKARRQDTPENRAIM 1239 +R +EYDAL++IE VLVAS+ + ++LYH+AF +FWVKGS +EG F S+A + MW VLGHINGNAIYNN+D AF EYV YT A W ++P+DVAL +T+SDFPYSWPL+Q+YS KFV TNLIS VG EH+ D VSDA+A +TLF+ G G +A +K + A+++ R R LQK + E RR + ++ +CL GC YTSKDGT GRVCD +C ++YGTLGC + G GT C ACYND KA +QDTPENR IM Sbjct: 43 LRKSLSEYDALSIIEPVVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFPSSAEASGMWQVLGHINGNAIYNNDDPAFVEYVEYTRAHWGYEHPYDVALGMTISDFPYSWPLYQRYSSKFVVTNLISYVGDEHVTQDTVSDAVAGKTLFVHG-----GGVADVKTASAPPAPVAVQETARRSQRRRKLQKRKTRENW------------RRGHAGDE-------TPKCLDGCEYTSKDGTRGRVCDANCSRRDVYGTLGCGTKDGAYGTECRACYNDGGKAHKQDTPENRVIM 314 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9780.23879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9780.23879.1 >prot_P-canaliculata_contig9780.23879.1 ID=prot_P-canaliculata_contig9780.23879.1|Name=mRNA_P-canaliculata_contig9780.23879.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=1113bp MDLVLYYAEGDEDNLAVTSAAHAISSSAGRCFANTRTVYANLDKEDNVYPback to top mRNA from alignment at P-canaliculata_contig9780:1915..10165- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9780.23879.1 ID=mRNA_P-canaliculata_contig9780.23879.1|Name=mRNA_P-canaliculata_contig9780.23879.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=8251bp|location=Sequence derived from alignment at P-canaliculata_contig9780:1915..10165- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9780:1915..10165- >mRNA_P-canaliculata_contig9780.23879.1 ID=mRNA_P-canaliculata_contig9780.23879.1|Name=mRNA_P-canaliculata_contig9780.23879.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=6678bp|location=Sequence derived from alignment at P-canaliculata_contig9780:1915..10165- (Pelvetia canaliculata dioecious)back to top |