Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 857 |
| Cds size | 429 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817339.5862885-CDS-P-canaliculata_contig97628:11..440 | 1622817339.5862885-CDS-P-canaliculata_contig97628:11..440 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97628 12..440 + |
| 1693495233.231881-CDS-P-canaliculata_contig97628:11..440 | 1693495233.231881-CDS-P-canaliculata_contig97628:11..440 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97628 12..440 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817339.5970554-UTR-P-canaliculata_contig97628:440..868 | 1622817339.5970554-UTR-P-canaliculata_contig97628:440..868 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig97628 441..868 + |
| 1693495233.2428524-UTR-P-canaliculata_contig97628:440..868 | 1693495233.2428524-UTR-P-canaliculata_contig97628:440..868 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig97628 441..868 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97628.23862.1 >prot_P-canaliculata_contig97628.23862.1 ID=prot_P-canaliculata_contig97628.23862.1|Name=mRNA_P-canaliculata_contig97628.23862.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=143bp
LIPRAAPPPPREPIEPIPAVLPGLGQHAEPIYGNLLSFFKIRGVTVHEHV
IEAASTTKRAQPFVRNRKQMIALLVLYVRAVQRMGGGGIDDPAPGMSPKQ
PLPGMRVHDPLHGKQSCPKLRSFHQGAGQISPGRGFFCSVPS* back to topmRNA from alignment at P-canaliculata_contig97628:12..868+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig97628.23862.1 ID=mRNA_P-canaliculata_contig97628.23862.1|Name=mRNA_P-canaliculata_contig97628.23862.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=857bp|location=Sequence derived from alignment at P-canaliculata_contig97628:12..868+ (Pelvetia canaliculata dioecious)
CTCATACCTCGAGCTGCGCCTCCTCCTCCACGGGAACCTATTGAGCCAAT
CCCAGCGGTACTTCCCGGACTTGGACAGCACGCAGAGCCCATCTACGGTA
ACCTCCTGAGTTTTTTCAAGATCAGGGGTGTAACAGTACACGAGCACGTT
ATTGAGGCAGCATCGACGACAAAAAGAGCGCAGCCCTTTGTTCGTAACAG
AAAACAAATGATAGCGCTACTTGTACTGTACGTGAGAGCCGTTCAACGAA
TGGGGGGGGGGGGAATCGACGATCCCGCCCCGGGAATGTCACCAAAACAG
CCCCTCCCGGGTATGAGAGTGCATGATCCCCTACATGGTAAACAGTCTTG
CCCAAAACTCCGCTCATTTCACCAGGGGGCTGGTCAAATATCCCCTGGGA
GGGGGTTCTTTTGTTCAGTTCCCTCCTAAACTCCGGAACTGGTTTAGGAC
ATCCTTCCACCCCTCCTCTCCATTCCTTGAACGAGTCGTGATTCTTTCCC
GAGTCAACTCACCACACAGCCATGGTCGTCTAGGCTCATGGCCACCTCTC
CCTCGTGAGCACGAGCGGTGTCAATGTCCGCCTTGTGTCGGCGGCGAGGG
TAGCGGCCGAACCATCCACGTGTGACGGTACCATCCTTGACGGCGCCATC
CTTGGTGCTGCTCTCCAGCTCCTCCTTGAGGAAGTGCCGGATAGTCCGCA
CCTTCCGCTGCCTCTTTTCGTCGGCGGCGACGAGGATGATGCTCTTTGAG
GCGGCGCCTTTGCTATTGCCCACAAAGTCGAAGACAATAGAACCGTCTAC
CGTCGGCCAAATCGCTGTTCGGCCATCCGCAGAGACGATCCTGGTCCGCA
CGCTTTC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig97628:12..868+ >mRNA_P-canaliculata_contig97628.23862.1 ID=mRNA_P-canaliculata_contig97628.23862.1|Name=mRNA_P-canaliculata_contig97628.23862.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=858bp|location=Sequence derived from alignment at P-canaliculata_contig97628:12..868+ (Pelvetia canaliculata dioecious)
CTCATACCTCGAGCTGCGCCTCCTCCTCCACGGGAACCTATTGAGCCAAT
CCCAGCGGTACTTCCCGGACTTGGACAGCACGCAGAGCCCATCTACGGTA
ACCTCCTGAGTTTTTTCAAGATCAGGGGTGTAACAGTACACGAGCACGTT
ATTGAGGCAGCATCGACGACAAAAAGAGCGCAGCCCTTTGTTCGTAACAG
AAAACAAATGATAGCGCTACTTGTACTGTACGTGAGAGCCGTTCAACGAA
TGGGGGGGGGGGGAATCGACGATCCCGCCCCGGGAATGTCACCAAAACAG
CCCCTCCCGGGTATGAGAGTGCATGATCCCCTACATGGTAAACAGTCTTG
CCCAAAACTCCGCTCATTTCACCAGGGGGCTGGTCAAATATCCCCTGGGA
GGGGGTTCTTTTGTTCAGTTCCCTCCTAACTCATACCTCGAGCTGCGCCT
CCTCCTCCACGGGAACCTATTGAGCCAATCCCAGCGGTACTTCCCGGACT
TGGACAGCACGCAGAGCCCATCTACGGTAACCTCCTGAGTTTTTTCAAGA
TCAGGGGTGTAACAGTACACGAGCACGTTATTGAGGCAGCATCGACGACA
AAAAGAGCGCAGCCCTTTGTTCGTAACAGAAAACAAATGATAGCGCTACT
TGTACTGTACGTGAGAGCCGTTCAACGAATGGGGGGGGGGGGAATCGACG
ATCCCGCCCCGGGAATGTCACCAAAACAGCCCCTCCCGGGTATGAGAGTG
CATGATCCCCTACATGGTAAACAGTCTTGCCCAAAACTCCGCTCATTTCA
CCAGGGGGCTGGTCAAATATCCCCTGGGAGGGGGTTCTTTTGTTCAGTTC
CCTCCTAA back to top
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