mRNA_P-canaliculata_contig9754.23850.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Match: A0A6H5LKW3_9PHAE (Duf842 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKW3_9PHAE) HSP 1 Score: 211 bits (536), Expect = 1.100e-67 Identity = 102/155 (65.81%), Postives = 121/155 (78.06%), Query Frame = 1 Query: 1 MTERDQEALDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVNACMRRCEQPLHEVNDVVQQEVGALQARHGDALNIRANRIQRCIMDCADEAKDLIPPGAKEGDAVVQRAMAQNVKCTGVCVKKHLTLLPGIEAKIKNAASTVAKT 465 MTE+DQ+AL KGF+ LGDNID+ Y+RPLQK AYLCM++CND+S +SSEAV ACM+RCE PL E+N VVQ+EVG LQ NR+QRC MDCAD+AKDLIP GAK GDAVV+RAMAQN+KCT C KKHL LLP +EAK+K A VA + Sbjct: 1 MTEQDQQALQKGFQGLGDNIDRFYARPLQKAAYLCMSKCNDNSKMSSEAVAACMKRCEGPLQEINKVVQEEVGGLQ-----------NRMQRCAMDCADDAKDLIPAGAKMGDAVVERAMAQNIKCTSGCAKKHLALLPNVEAKVKAVAEMVANS 144
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Match: A0A6G0WE45_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WE45_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.720e-23 Identity = 45/144 (31.25%), Postives = 83/144 (57.64%), Query Frame = 1 Query: 25 LDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVNACMRRCEQPLHEVNDVVQQEVGALQARHGDALNIRANRIQRCIMDCADEAKDLIPPGAKEGDAVVQRAMAQNVKCTGVCVKKHLTLLPGIEAKIKNAASTV 456 +++ + +++DK RP+QK Y+C +C D+ S+E + AC++RC++P+ +V + + QE+ + Q NR+QRC MDC D A+D + A+ ++ + A + KC CV H+ LLP ++ +I+ A S++ Sbjct: 6 INQAVNKMMESLDKSTFRPMQKNGYVCSVKCFDNKDCSAEQLQACIQRCQEPVAQVQNYLNQELSSFQ-----------NRLQRCAMDCQDRAQDGL--SARPSESEIASAQSNMEKCVSKCVDSHIKLLPALKKRIEEATSSI 136
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Match: A0A024TDU0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TDU0_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.130e-21 Identity = 46/142 (32.39%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 25 LDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVNACMRRCEQPLHEVNDVVQQEVGALQARHGDALNIRANRIQRCIMDCADEAKDLIPPGAKEGDAVVQRAMAQNVKCTGVCVKKHLTLLPGIEAKIKNAAS 450 +++ + +++DK RPLQK Y+C +C D+ +SSE + C+ RC+QP+ +V + + QE+ + Q NR+QRC MDC D A+D + ++ ++ + A A KC CV H+ LLP ++ +I+ S Sbjct: 6 INQAVNKMMESLDKGTFRPLQKNGYVCSVKCFDNKDISSEQLQHCIERCQQPMAQVQNYLSQEMQSFQ-----------NRLQRCAMDCQDRAQDSL--SSQPSESQIATAQAGMEKCVSKCVDGHIKLLPTLKKRIEETVS 134
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Match: UPI00067D4483 (protein FAM136A-like n=2 Tax=Obtectomera TaxID=104431 RepID=UPI00067D4483) HSP 1 Score: 92.8 bits (229), Expect = 4.040e-21 Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 1 MTERDQEALDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVNACMRRCEQPLHEVNDVVQQEVGALQARHGDALNIRANRIQRCIMDCADEAKDLIPPGAKEGDAVVQRAMAQNVKCTGVCVKKHLTLLPGIEAKIKNAAST 453 M E + +++ +L + +DK Y R +Q + C ARC D S E V+ C+ C PL++ N+ VQ E+ LQ NR+QRC+MDC D A+D + GA + + + KC CV KH+TL+P + +K ++ Sbjct: 1 MVEAQKYRIEQEMTNLVNELDKSYLRKMQGDMHRCAARCCDDQQSSLERVHGCIENCTAPLNQANNYVQGEINHLQ-----------NRLQRCVMDCNDSARDRL--GADPSQDTIDKCTIEFEKCAVKCVDKHMTLIPSMMKTMKKVLAS 138
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Match: A0A2D4CBC7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBC7_PYTIN) HSP 1 Score: 92.4 bits (228), Expect = 4.750e-21 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 16 QEALDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVNACMRRCEQPLHEVNDVVQQEVGALQARHGDALNIRANRIQRCIMDCADEAKDLIPPGAKEGDAVVQRAMAQNVKCTGVCVKKHLTLLPGIEAKIKNAASTV 456 ++ L+ + D +D+ R QK Y+C A+C D+ + S+E + C+ RC+ P+ +V + +Q E+ + Q NR+QRC M+C D A+D +P DA + C CV HL LLP ++ ++++A V Sbjct: 3 EQKLNDAVSKMMDTLDRKVLRDFQKDGYVCAAKCFDNKSWSTEQLQHCVERCQMPMQQVQNYMQNELQSFQ-----------NRLQRCAMECQDRARDSMPSSGNPSDAQMAAIEKDMQSCFNHCVDSHLKLLPTLQKRVEDAVKQV 138
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Match: A0A024GGH9_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GGH9_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 5.010e-21 Identity = 44/148 (29.73%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 16 QEALDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVNACMRRCEQPLHEVNDVVQQEVGALQARHGDALNIRANRIQRCIMDCADEAKDLIPPGAKEGDAVVQRAMAQNVKCTGVCVKKHLTLLPGIEAKIKNAASTVA 459 ++ ++ + + +D + R QK YLC A+C D SSE + C+ RC+ P+ ++ +V+QQE+ + Q NR+QRC MDC D A+D IP K R + C G CV K + +P ++ +++ + V+ Sbjct: 3 EQKINDAVHGMMEQLDVKFIRDFQKRGYLCSAQCFDDKTSSSEQIQNCVERCQFPMQQLQNVIQQELQSFQ-----------NRLQRCAMDCQDRARDSIPINEKVDHMTQSRMQKEMEACVGQCVDKQIQCIPTLQKRLEQNITQVS 139
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Match: A0A485KVY4_9STRA (Aste57867_12439 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVY4_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.800e-20 Identity = 44/144 (30.56%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 25 LDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVNACMRRCEQPLHEVNDVVQQEVGALQARHGDALNIRANRIQRCIMDCADEAKDLIPPGAKEGDAVVQRAMAQNVKCTGVCVKKHLTLLPGIEAKIKNAASTV 456 +++ + D +DK RPLQK Y+C +C D+ S+E + C+ RC+QP+ +V + + QE+ + Q NR+QRC MDC D A+D + ++ ++ + A C CV H+ LLP ++ +I++A +++ Sbjct: 6 INQAVSKMMDTLDKGTFRPLQKNGYVCSVKCFDTKDCSAEQLQQCIERCQQPMAQVQNYLNQELQSFQ-----------NRLQRCAMDCQDRAQDSLGT-SQPSESQIAAAQKGMESCVSQCVGSHIKLLPTLKKRIEDAVASI 137
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Match: UPI00103EDF8D (protein FAM136A n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103EDF8D) HSP 1 Score: 88.6 bits (218), Expect = 1.800e-19 Identity = 46/151 (30.46%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 1 MTERDQEALDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVNACMRRCEQPLHEVNDVVQQEVGALQARHGDALNIRANRIQRCIMDCADEAKDLIPPGAKEGDAVVQRAMAQNVKCTGVCVKKHLTLLPGIEAKIKNAAST 453 M E + +++ ++ + +DK Y R +Q + C A+C D + S E V+ C+ C PL++ N+ VQ E+ LQ NR+QRC+MDC D A+D + P + V +A KC CV KH+ ++P + +K ++ Sbjct: 1 MVEAQKYRIEQEMTNMVNELDKSYLRKMQGDMHRCAAKCCDDTQTSLERVHGCIENCTTPLNQANNYVQGEINHLQ-----------NRLQRCVMDCNDAARDRLGPDPSQ--ETVDKATIDFEKCAVRCVDKHMAIIPSMMKTMKKVLAS 138
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Match: A0A2A4K0U2_HELVI (Uncharacterized protein n=5 Tax=Noctuidae TaxID=7100 RepID=A0A2A4K0U2_HELVI) HSP 1 Score: 87.0 bits (214), Expect = 7.140e-19 Identity = 46/151 (30.46%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 1 MTERDQEALDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVNACMRRCEQPLHEVNDVVQQEVGALQARHGDALNIRANRIQRCIMDCADEAKDLIPPGAKEGDAVVQRAMAQNVKCTGVCVKKHLTLLPGIEAKIKNAAST 453 M E + +++ +L + +DK Y R +Q + C A+C D S E V+ C+ C PL++ N+ VQ E+ LQ NR+QRC+MDC D A+D + G+ V + + KC CV KH+ ++P + +K+ ++ Sbjct: 1 MVEAQRFRIEQEMTNLVNELDKSYLRKMQGDMHRCAAKCCDDPQTSLERVHGCIDNCTAPLNQANNYVQGEINHLQ-----------NRLQRCVMDCNDHARDRL--GSDPSQETVDKCTIEFEKCAVKCVDKHIGIIPNMMKTMKSVLAS 138
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Match: A0A1E1WAD9_PECGO (Uncharacterized protein n=1 Tax=Pectinophora gossypiella TaxID=13191 RepID=A0A1E1WAD9_PECGO) HSP 1 Score: 87.0 bits (214), Expect = 7.140e-19 Identity = 46/151 (30.46%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 1 MTERDQEALDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVNACMRRCEQPLHEVNDVVQQEVGALQARHGDALNIRANRIQRCIMDCADEAKDLIPPGAKEGDAVVQRAMAQNVKCTGVCVKKHLTLLPGIEAKIKNAAST 453 M E + L++ +L + +DK Y R +Q + C ARC D + E V+ C+ C L++ N+ VQ E+ LQ NR+QRC+MDC D A+D + G+ + +A KC CV KH++++P + +K ++ Sbjct: 1 MVEAQKYRLEQEMTNLVNELDKSYLRRMQGDMHKCAARCCDDQTSTLERVHGCIENCTTSLNQANNYVQGEINHLQ-----------NRLQRCVMDCNDSARDRL--GSDPNQETIDKATIDFEKCAVKCVDKHISIIPSMMKTMKQVLAS 138 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9754.23850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9754.23850.1 >prot_P-canaliculata_contig9754.23850.1 ID=prot_P-canaliculata_contig9754.23850.1|Name=mRNA_P-canaliculata_contig9754.23850.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=157bp MTERDQEALDKGFRSLGDNIDKLYSRPLQKTAYLCMARCNDSSALSSEAVback to top mRNA from alignment at P-canaliculata_contig9754:5577..8218+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9754.23850.1 ID=mRNA_P-canaliculata_contig9754.23850.1|Name=mRNA_P-canaliculata_contig9754.23850.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2642bp|location=Sequence derived from alignment at P-canaliculata_contig9754:5577..8218+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9754:5577..8218+ >mRNA_P-canaliculata_contig9754.23850.1 ID=mRNA_P-canaliculata_contig9754.23850.1|Name=mRNA_P-canaliculata_contig9754.23850.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=942bp|location=Sequence derived from alignment at P-canaliculata_contig9754:5577..8218+ (Pelvetia canaliculata dioecious)back to top |