mRNA_P-canaliculata_contig9753.23849.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Match: A0A6H5L7P6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P6_9PHAE) HSP 1 Score: 303 bits (775), Expect = 3.980e-98 Identity = 154/258 (59.69%), Postives = 179/258 (69.38%), Query Frame = 1
Query: 1 RANDFLEFCMERYLLPLASERGNRLGPAL--DLGCGSGRDTVFMAQHLPPGARVLGVDNHSYALERAARLAEQWVD---------------AAEESGDDTGRENYVHVLGEKGSSSSSGVAPRAGDK------------------RRTCEWLLADLRKPGSLNGLKADIIHGHRFKCEQLLPILRDQVLMPGGLFIWSTFLDTGTDNIVPPWRPSRMLRPGELANIFSGDGFEILQDEQGELPTRGSAVPANFFACRK 669
RANDFLEFCM+R++LP A + G G L DLGCGSGRDTV+MAQ LPPG RV+GVDNHSYALER ARLAE+W++ +EE + RE LG GV RAG + +R CEW L DLRK GSL+ ++A I+HGHRFKCE+LLP+LRD VL+PGG FIWSTFLDTG++N+VPPWRPSRM+RPGELA+IFSGDGFEIL DEQGELPTRGS VPANFF CRK
Sbjct: 230 RANDFLEFCMDRFVLPSAHDAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGKVVGGSGNGGGSEEGATRSQRETQTGCLG--------GVRSRAGGRSDTDGREGTTQGQPPEVRQRACEWSLTDLRKEGSLDAMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMRPGELADIFSGDGFEILVDEQGELPTRGSTVPANFFICRK 479
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Match: D7FQG6_ECTSI (Tellurite resistance methyltransferase, TehB, core n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG6_ECTSI) HSP 1 Score: 302 bits (774), Expect = 5.970e-98 Identity = 153/254 (60.24%), Postives = 181/254 (71.26%), Query Frame = 1
Query: 1 RANDFLEFCMERYLLPLASERGNRLGPAL--DLGCGSGRDTVFMAQHLPPGARVLGVDNHSYALERAARLAEQWVDAAEESGDDTG----------------RENYVHVLG------------EKGSSSSSGVAPRAGDKRRTCEWLLADLRKPGSLNGLKADIIHGHRFKCEQLLPILRDQVLMPGGLFIWSTFLDTGTDNIVPPWRPSRMLRPGELANIFSGDGFEILQDEQGELPTRGSAVPANFFACRKR 672
RANDFLEFCM+R++LP + G L DLGCGSGRDTV+MAQ LPPG RV+GVDNHSYALER ARLAE+W++ SG+ G +E LG + ++ G P ++R CEW LADLRK GSL+G++A I+HGHRFKCE+LLP+LRD VL+PGG FIWSTFLDTG++N+VPPWRPSRM+RPGELA+IFSGDGFEIL DEQGELPTRGS VPANFFACRKR
Sbjct: 231 RANDFLEFCMDRFVLPSGHDASPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTS-SGEVAGGXXXXXXXEQGATRSQQETQTGCLGGVTSGAVGRSDTDGSEGATKGNPPEV--RQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMRPGELADIFSGDGFEILVDEQGELPTRGSTVPANFFACRKR 481
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Match: A0A5J4Z1S4_PORPP (Rhodanese domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1S4_PORPP) HSP 1 Score: 134 bits (336), Expect = 5.230e-34 Identity = 87/235 (37.02%), Postives = 114/235 (48.51%), Query Frame = 1
Query: 1 RANDFLEFCMERYLLPLAS------ERGNRLGPALDLGCGSGRDTVFMAQHLPPGARVLGVDNHSYALERAARLAEQWVDAAEESGDDTGRENYVHVLGEKGSSSSSGVAPRAGDKRRTCEWLLADLRKPGSLNGLKADIIHGHRFKCEQLLPILRDQVLMPGGLFIWSTFLDTGTD--NIVPPWRPSRMLRPGELANIFSGDG----FEILQDEQGELPTRGSAVPANFFACRK 669
R N+FLE LPL++ ++ ALDLGCGSGRD VF+ HLP RV+G DNHSYALERA LA+ RA C L D + L KA ++HG RF LL +RD V+ GG+FIWSTF+ + N+ PP++ R+L PGEL +F +E++++ G TRG VPA FFACR+
Sbjct: 156 RPNEFLEQLFSSGPLPLSAYLRAEQQKLTEAPVALDLGCGSGRDLVFLKMHLPGRWRVMGFDNHSYALERAKALAQ-----------------------------------RASVDVEVCTVDLTDELQAARLP--KAHLVHGCRFLHRPLLRHVRDHVIHVGGIFIWSTFVQSAESARNMAPPYKEKRVLAPGELREMFLVPSLHVQYELIEERDGVFLTRGVPVPATFFACRR 353
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Match: A0A0G4I8J9_9ALVE (Methyltransf_25 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I8J9_9ALVE) HSP 1 Score: 117 bits (293), Expect = 1.150e-27 Identity = 88/233 (37.77%), Postives = 114/233 (48.93%), Query Frame = 1
Query: 1 RANDFLEFCMERYLLPLASERGNRLGPALDLGCGSGRDTVFMAQHLPPGARVLGVDNHSYALERAARLAEQWVDAAEESGDDTGRENYVHVLGEKGSSSSSGVAPRAGDKR-RTCEWLLADLRKPGSLNGLKADIIHGHRFKCEQLLPILRDQVLMPGGLFIWSTFLDTGTDNIV----PPWRPSRMLRPGELANIFSGDG----FEILQDEQGELPTRGSAVPANFFACRKR 672
RAN FLEFC++++ P+ E G ALDLGCG+GRD VF+A G RV+G DNH AL RA L LG G R K C+ L LR+ S + +IHGHRF +LLP+ RD +L GLF+WSTF + + PP++ R+LR GEL +F FEI+ DE G L + G V A+FF RK+
Sbjct: 163 RANVFLEFCLKKFA-PVFEEAGGEGRVALDLGCGNGRDGVFLAAKT--GIRVVGSDNHDGALARARALTAD--------------------LGLAGLCEWKQCDLRKNGKSVEDCQREL--LREDRSES---VGLIHGHRFLERRLLPVCRD-LLACRGLFVWSTFASVDGEILEERPGPPYKAGRLLREGELREVFESSKSDCCFEIIFDEMGTLLSHGVEVNAHFFLARKK 366
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Match: R1EYM2_EMIHU (Rhodanese domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EYM2_EMIHU) HSP 1 Score: 114 bits (284), Expect = 1.400e-26 Identity = 81/214 (37.85%), Postives = 104/214 (48.60%), Query Frame = 1
Query: 1 RANDFLEFCMERYLLPLASERGNRLGPALDLGCGSGRDTVFMAQHLPPGARVLGVDNHSYALERAARLAEQWVDAAEESGDDTGRENYVHVLGEKGSSSSSGVAPRAGDKRRTCEWLLADLRKPG--SLNGLKADIIHGHRFKCEQLLPILRDQVLMPGGLFIWSTFLDTGTDNIVPPWRPSRMLRPGELANIFSGD-GFEILQDEQGELPTRG 633
R N FL + + LP A G A+D+GCGSGRD VF+AQ L +GVDNH ALERA RLA+ GV+ + LA++RK L I+HG RF LL L +V+ PGGL +WSTFLD PP+RPSR L+ GE+ ++F GFE+L+ E+G L TRG
Sbjct: 158 RPNAFLASALRQVDLPEA-------GAAIDVGCGSGRDAVFLAQTLGDTWETIGVDNHKGALERAQRLAD-----------------------------GCGVS---------AAFALANVRKQSLSDLTERPISIVHGCRFLDRPLLRAL-PEVVAPGGLVVWSTFLDGDGPPQAPPFRPSRRLQRGEMEHLFGESRGFEVLRAEEGTLLTRG 325
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Match: A0A835YXG6_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG6_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.790e-18 Identity = 43/72 (59.72%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 1 RANDFLEFCMERYLLPLASERGNRLGPALDLGCGSGRDTVFMAQHLPPGARVLGVDNHSYALERAARLAEQW 216
R NDFL+F + +Y+LP R G ALDLGCG+GRD VF+AQ LPPG RV+GVDNH AL+R A LA +W
Sbjct: 265 RPNDFLDFALHKYVLPDIVHGDRRTGLALDLGCGNGRDAVFLAQKLPPGWRVVGVDNHKGALQRCAELASRW 336
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Match: A0A545UH50_9GAMM (Methyltransferase domain-containing protein n=1 Tax=Aliikangiella coralliicola TaxID=2592383 RepID=A0A545UH50_9GAMM) HSP 1 Score: 67.8 bits (164), Expect = 7.350e-10 Identity = 62/200 (31.00%), Postives = 92/200 (46.00%), Query Frame = 1
Query: 82 ALDLGCGSGRDTVFMAQHLPPGARVLGVDNHSYALERAARLAEQWVDAAEESGDDTGRENYVHVLGEKGSSSSSGVAPRAGDKRRTCEWLLADLRKPGS-LNGLKA--DIIHGHRFKCEQLLPILRDQVLMPGGLFIWSTFLDTGTDNIVPPWRPSRMLRPGELANIFSGDGFEILQDEQGELPTRGSAVPANFFACRKR 672
ALD+GCGSGRD+V++AQ G +V +D AL++ A LA + N+V+V G ++ DL+ + L+ ++ D+I R+ LLP ++ Q + GG ++ TF+ G + P P +L+PGELA IFS FEIL DE L P N F + R
Sbjct: 141 ALDIGCGSGRDSVYLAQQ---GWQVNSIDYLPGALDKLADLA---------------KNNHVNVNG-----------------------MMIDLQDSSNPLDEIQQQFDLILVVRYLHRPLLPQIK-QKIKRGGYVVYQTFMQ-GCEAFGKPKNPKFLLKPGELAQIFSD--FEILLDEVEYLE---DGRPTNVFIAKNR 292
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Match: A0A7S2ZA17_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZA17_9RHOD) HSP 1 Score: 60.1 bits (144), Expect = 2.890e-7 Identity = 37/69 (53.62%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 1 RANDFLEFCMERYLLPLASERGNRLGPALDLGCGSGRDTVFMAQHLPPGARVLGVDNHSYALERAARLA 207
R NDFLE +E L +E G A+D GCGSGRD V++AQ L G RV+GVDNHS AL R LA
Sbjct: 74 RPNDFLECVIEVLKDRLPAE-----GVAIDYGCGSGRDVVYLAQMLK-GWRVIGVDNHSNALARGEGLA 136
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Match: A0A7S3E5W8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E5W8_9RHOD) HSP 1 Score: 57.8 bits (138), Expect = 1.300e-6 Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 1 RANDFLEFCMERYLLPLASERGNRLGPALDLGCGSGRDTVFMAQHLPPGARVLGVDNHSYALER 192
R NDFLE +E L +E G A+D GCGSGRD V++AQ L G RV+GVDNHS AL R
Sbjct: 161 RPNDFLECVIEVLKDRLPAE-----GVAIDYGCGSGRDVVYLAQMLK-GWRVIGVDNHSNALAR 218
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Match: A0A7S1J5A0_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J5A0_9EUGL) HSP 1 Score: 58.2 bits (139), Expect = 2.480e-6 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 1 RANDFLE----FCMERYLLPLASERGNRLGPALDLGCGSGRDTVFMAQHLPPGARVLGVDNHSYALERAARLAEQ 213
R ++FLE C+E + L SE A+DLGCGSGRD V++AQ LP +V GVDNH AL R+ LA++
Sbjct: 296 RPSEFLEEVLDICLEN--MDLGSEAAYTT--AVDLGCGSGRDLVYLAQRLPSHWKVYGVDNHGNALIRSEALAQR 366 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9753.23849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9753.23849.1 >prot_P-canaliculata_contig9753.23849.1 ID=prot_P-canaliculata_contig9753.23849.1|Name=mRNA_P-canaliculata_contig9753.23849.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=215bp MERYLLPLASERGNRLGPALDLGCGSGRDTVFMAQHLPPGARVLGVDNHSback to top mRNA from alignment at P-canaliculata_contig9753:197..1549+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9753.23849.1 ID=mRNA_P-canaliculata_contig9753.23849.1|Name=mRNA_P-canaliculata_contig9753.23849.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1353bp|location=Sequence derived from alignment at P-canaliculata_contig9753:197..1549+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9753:197..1549+ >mRNA_P-canaliculata_contig9753.23849.1 ID=mRNA_P-canaliculata_contig9753.23849.1|Name=mRNA_P-canaliculata_contig9753.23849.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1290bp|location=Sequence derived from alignment at P-canaliculata_contig9753:197..1549+ (Pelvetia canaliculata dioecious)back to top |