mRNA_P-canaliculata_contig975.23843.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Match: A0A150VIG9_9PEZI (Uncharacterized protein n=1 Tax=Acidomyces richmondensis BFW TaxID=766039 RepID=A0A150VIG9_9PEZI) HSP 1 Score: 187 bits (474), Expect = 2.360e-57 Identity = 89/139 (64.03%), Postives = 107/139 (76.98%), Query Frame = 2 Query: 167 MQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRNRAVQHGPLNGQQQSQRPPKVP------EVQTTQQPYGSIGGRSAQQLGSVEPRDGEFWDRNDLPARFRRGTWTLTEMEAVESGGASLF 565 MQAT+RLLQHRQPMIRFLGKR PK +DHSPH HPA+P + LP SF +YRNRA+QHGPL GQQ SQ+ P + TT PYG+IGG S ++LGSV+P+ GEFWDRN+LP+RF R WT E+EA+ESGGASL+ Sbjct: 1 MQATKRLLQHRQPMIRFLGKRHTPKQVDHSPHAHPASPSNQLPESFAQYRNRAIQHGPLGGQQ-SQQSTSSPVHTGASAMSTTTSPYGAIGGHSGRELGSVQPQKGEFWDRNELPSRFHRARWTEAEIEAIESGGASLY 138
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Match: A0A2D3UNA0_9PEZI (Related to mitochondrial ribosomal protein n=1 Tax=Ramularia collo-cygni TaxID=112498 RepID=A0A2D3UNA0_9PEZI) HSP 1 Score: 167 bits (424), Expect = 7.440e-50 Identity = 81/134 (60.45%), Postives = 100/134 (74.63%), Query Frame = 2 Query: 167 MQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRNRAVQHGPLNGQQQSQRPPKVPEVQTTQQPYGSIGGRSAQQLGSVEPRDGEFWDRNDLPARFRRGTWTLTEMEAVESGGASLFA 568 MQATRRLL HRQPMIRFLGKR P+ IDH+P VHP +P LP SF YR +A QHGPL G Q+ +V + QQPYG+IGGRSA++LG ++P GEF DR++LP RF+R W+L E+EA+ESGGAS+FA Sbjct: 1 MQATRRLL-HRQPMIRFLGKRSTPQKIDHAPKVHPESPSSALPESFASYREQATQHGPLKGTQRQSSSSAPQQVSSVQQPYGAIGGRSARELGPIKPGKGEFSDRSELPKRFQRTPWSLAEIEAIESGGASMFA 133
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Match: A0A3M7GHK0_HORWE (Uncharacterized protein n=3 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7GHK0_HORWE) HSP 1 Score: 167 bits (424), Expect = 2.170e-49 Identity = 84/141 (59.57%), Postives = 96/141 (68.09%), Query Frame = 2 Query: 143 SRIAPPSTMQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRNRAVQHGPLNGQQQSQRPPKVPEVQTTQQPYGSIGGRSAQQLGSVEPRDGEFWDRNDLPARFRRGTWTLTEMEAVESGGASLF 565 SR PPS+ TR L QHRQPMIRFLGKR +PK +DH+P HPA+P LP SF YR RA QHGPL G+QQ QR G+IGGRSAQQLGSVEP G+ WDRN LP RF R WT ++EA+ESGGAS+F Sbjct: 26 SRRPPPSSSVFTRALWQHRQPMIRFLGKRSIPKQVDHTPAPHPASPTHELPESFASYRTRAQQHGPLGGKQQGQRAAAPSGSAGATPTVGNIGGRSAQQLGSVEPAQGQVWDRNQLPKRFHRARWTEADIEALESGGASMF 166
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Match: A0A3M7B7C3_HORWE (Uncharacterized protein n=7 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7B7C3_HORWE) HSP 1 Score: 165 bits (417), Expect = 8.830e-49 Identity = 82/133 (61.65%), Postives = 92/133 (69.17%), Query Frame = 2 Query: 167 MQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRNRAVQHGPLNGQQQSQRPPKVPEVQTTQQPYGSIGGRSAQQLGSVEPRDGEFWDRNDLPARFRRGTWTLTEMEAVESGGASLF 565 MQ TR L QHRQPMIRFLGKR VPK +DH+P HPA+P LP SF YR RA QHGPL G+QQ QR G+IGGRSAQQLGSVEP G+ WDRN LP RF R WT ++EA+ESGGAS+F Sbjct: 1 MQFTRALWQHRQPMIRFLGKRSVPKQVDHTPAPHPASPTHELPESFASYRTRAQQHGPLGGKQQGQRAAAPSGSAGATPTVGNIGGRSAQQLGSVEPAQGQVWDRNQLPKRFHRARWTEADIEALESGGASMF 133
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Match: A0A2G5HML5_CERBT (Uncharacterized protein n=5 Tax=Cercospora TaxID=29002 RepID=A0A2G5HML5_CERBT) HSP 1 Score: 162 bits (410), Expect = 1.010e-47 Identity = 77/133 (57.89%), Postives = 92/133 (69.17%), Query Frame = 2 Query: 167 MQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRNRAVQHGPLNGQQQSQRPPKVPEVQTTQQPYGSIGGRSAQQLGSVEPRDGEFWDRNDLPARFRRGTWTLTEMEAVESGGASLF 565 MQATRRL QHRQPMIRFLGKR PK +DH+P HP +P LP SF YR +A+QHGPL G QQ P PYG+IGGRSA++LG ++ GEF DRNDLP RF R W+ E++A+ESGGAS+F Sbjct: 1 MQATRRLFQHRQPMIRFLGKRSNPKQVDHTPKPHPESPSHDLPSSFANYRQQAIQHGPLKGGQQKPNAPSSGSAAAPLNPYGAIGGRSAKELGPIKVAQGEFADRNDLPKRFHRTAWSQAEIDAIESGGASMF 133
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Match: A0A6A6WCU3_9PEZI (Uncharacterized protein n=1 Tax=Pseudovirgaria hyperparasitica TaxID=470096 RepID=A0A6A6WCU3_9PEZI) HSP 1 Score: 161 bits (407), Expect = 2.040e-47 Identity = 81/134 (60.45%), Postives = 96/134 (71.64%), Query Frame = 2 Query: 167 MQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRNRAVQHGPLNGQQQSQRPPKVPEVQTTQQPYGS-IGGRSAQQLGSVEPRDGEFWDRNDLPARFRRGTWTLTEMEAVESGGASLF 565 M ATR LLQHRQPMIRFLGKR +P +DHSPHVHPA+P +LP SF EYR +A QHGPL GQQQS + YG IG RS LGSV P +G+++DRNDLPARF+R W+ E++A+ESGGASLF Sbjct: 1 MHATRALLQHRQPMIRFLGKRNIPAKLDHSPHVHPASPSPSLPSSFAEYRQKAQQHGPLGGQQQS-----------SSISYGGYIGSRSGSSLGSVTPSEGQYFDRNDLPARFKRLAWSQAEIDAIESGGASLF 123
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Match: M3B3Q5_PSEFD (Uncharacterized protein n=3 Tax=Pseudocercospora TaxID=131324 RepID=M3B3Q5_PSEFD) HSP 1 Score: 161 bits (408), Expect = 2.100e-47 Identity = 79/134 (58.96%), Postives = 97/134 (72.39%), Query Frame = 2 Query: 167 MQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRNRAVQHGPLNGQQQSQRPPKV-PEVQTTQQPYGSIGGRSAQQLGSVEPRDGEFWDRNDLPARFRRGTWTLTEMEAVESGGASLF 565 MQATR L QHRQPMIRFLGKR +PK +DHSP HP +P LP+SF +YR +A+QHGPL G Q Q P PYGSIGG+SA++LG ++P GEF DRN+LPARFRR W++ E+EA+ESGGAS+ Sbjct: 1 MQATRMLWQHRQPMIRFLGKRQLPKQVDHSPKPHPESPSHDLPQSFAKYREQAIQHGPLKGGQPRQAAPSGGASGPAPMNPYGSIGGKSAKELGPIKPGKGEFADRNELPARFRRVPWSMAEIEAIESGGASML 134
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Match: M2LS68_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2LS68_BAUPA) HSP 1 Score: 160 bits (404), Expect = 5.460e-47 Identity = 77/133 (57.89%), Postives = 90/133 (67.67%), Query Frame = 2 Query: 167 MQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRNRAVQHGPLNGQQQSQRPPKVPEVQTTQQPYGSIGGRSAQQLGSVEPRDGEFWDRNDLPARFRRGTWTLTEMEAVESGGASLF 565 M+ TR LLQ RQP+I+FLGKR PK +DH+PH HPA+P LP SF YR RA QHGPL Q T QPYG+IGGR + LG VEP+ GE+WDRN+LP RF R WT EMEA+ESGGAS+F Sbjct: 1 MRLTRVLLQKRQPLIKFLGKRHTPKQVDHTPHAHPASPTHELPESFASYRTRAQQHGPLGAAQ-------------TAQPYGAIGGRPGRALGPVEPKKGEYWDRNELPKRFHRTRWTAAEMEALESGGASMF 120
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Match: A0A6G1LFN1_9PEZI (Uncharacterized protein n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1LFN1_9PEZI) HSP 1 Score: 160 bits (405), Expect = 7.210e-47 Identity = 81/141 (57.45%), Postives = 95/141 (67.38%), Query Frame = 2 Query: 167 MQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRNRAVQHGPLNGQQQSQR-------PPKVPEVQTTQQPYGSIGGRSAQQLGSVEPRDGEFWDRNDLPARFRRGTWTLTEMEAVESGGASLFA 568 MQATR LLQHR PMIRFLGKR VPK IDH+P HPAAP D LP SF YR+RA QHGPLN + R PP T PYG+IGG SA++LG + GE WDRN+LP RF R W+ ++EA+ESGGAS++A Sbjct: 1 MQATRALLQHRTPMIRFLGKRSVPKQIDHTPKPHPAAPSDYLPESFALYRDRATQHGPLNPSSTAPRTQSTASSPPSGSAAAQTSNPYGAIGGHSARELGQIRLGKGEVWDRNELPKRFHRIRWSEADIEALESGGASMYA 141
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Match: A0A6A6HAG9_9PEZI (Uncharacterized protein n=1 Tax=Viridothelium virens TaxID=1048519 RepID=A0A6A6HAG9_9PEZI) HSP 1 Score: 157 bits (398), Expect = 4.290e-46 Identity = 79/134 (58.96%), Postives = 92/134 (68.66%), Query Frame = 2 Query: 167 MQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRNRAVQHGPLNGQQQSQRPPKVPEVQTTQQPYGSIGGRSAQQLGSVEPRDGEFWDRNDLPARFRRGTWTLTEMEAVESGGASLFA 568 MQATRRLLQHRQPMI+FLGKR P N+DHSPH HPA+P +LP SF YR +A QHGPL Q+T G+IGG S LGS+ P GE +DR+DLPARFRR WT E+EA+ESGGAS+FA Sbjct: 1 MQATRRLLQHRQPMIKFLGKRTPPANVDHSPHAHPASPTHSLPDSFATYRQKAQQHGPL--------------TQSTNFHSGAIGGHSGHSLGSIRPGKGEVFDRSDLPARFRRTPWTQAEIEAIESGGASMFA 120 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig975.23843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig975.23843.1 >prot_P-canaliculata_contig975.23843.1 ID=prot_P-canaliculata_contig975.23843.1|Name=mRNA_P-canaliculata_contig975.23843.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=135bp MQATRRLLQHRQPMIRFLGKRFVPKNIDHSPHVHPAAPDDTLPRSFKEYRback to top mRNA from alignment at P-canaliculata_contig975:26203..26913- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig975.23843.1 ID=mRNA_P-canaliculata_contig975.23843.1|Name=mRNA_P-canaliculata_contig975.23843.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=711bp|location=Sequence derived from alignment at P-canaliculata_contig975:26203..26913- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig975:26203..26913- >mRNA_P-canaliculata_contig975.23843.1 ID=mRNA_P-canaliculata_contig975.23843.1|Name=mRNA_P-canaliculata_contig975.23843.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=810bp|location=Sequence derived from alignment at P-canaliculata_contig975:26203..26913- (Pelvetia canaliculata dioecious)back to top |