Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 996 |
Cds size | 975 |
Stop | 0 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817337.7661638-CDS-P-canaliculata_contig97473:22..997 | 1622817337.7661638-CDS-P-canaliculata_contig97473:22..997 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97473 23..997 - |
1693495232.141103-CDS-P-canaliculata_contig97473:22..997 | 1693495232.141103-CDS-P-canaliculata_contig97473:22..997 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97473 23..997 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817337.790655-UTR-P-canaliculata_contig97473:997..1018 | 1622817337.790655-UTR-P-canaliculata_contig97473:997..1018 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig97473 998..1018 - |
1693495232.151339-UTR-P-canaliculata_contig97473:997..1018 | 1693495232.151339-UTR-P-canaliculata_contig97473:997..1018 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig97473 998..1018 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97473.23829.1 >prot_P-canaliculata_contig97473.23829.1 ID=prot_P-canaliculata_contig97473.23829.1|Name=mRNA_P-canaliculata_contig97473.23829.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=325bp
MPDDPLALAVRANIELRQGHPEAAARRLKPIVNSVAPDKVIAVYALSLFE IGRQEEAIAMLTKRVEAEAKAFHSRLALARMYRQLGKRPFADKLYSQSVD EFPNDTILMVEWLETRYEMGQRLVVRESLNRLADHTKNFDILLSAARINI DFGDYVVAKKQLAAAEEIRGLSPGIVVEKARMALAVGQFDEAIQQLLAIA DAVSEDAAVQLLLLEAYIGAKNAAGQVNVGKTLAKKFRGSYAQAMSRGLT DLSKGRNREARNAFERAIKVGGETLSALQKADTLALMAQTVRNEDPETAK TLLRQALLLDVMNPGANFVSGNIAF back to topmRNA from alignment at P-canaliculata_contig97473:23..1018- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig97473.23829.1 ID=mRNA_P-canaliculata_contig97473.23829.1|Name=mRNA_P-canaliculata_contig97473.23829.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=996bp|location=Sequence derived from alignment at P-canaliculata_contig97473:23..1018- (Pelvetia canaliculata dioecious) ATAGACCGAGCGTTGGCCGAAATGCCTGATGATCCTCTCGCGCTTGCCGT
TCGTGCCAATATCGAGCTCCGGCAAGGTCATCCAGAGGCCGCGGCTAGAC
GGCTCAAGCCGATCGTAAATAGCGTTGCACCAGACAAGGTGATAGCCGTG
TATGCGCTGAGTCTTTTTGAAATTGGGCGACAAGAGGAAGCCATCGCCAT
GCTTACCAAACGCGTCGAAGCCGAGGCGAAGGCCTTTCACTCTAGATTAG
CTCTAGCGCGAATGTACAGACAGCTTGGAAAACGTCCATTTGCCGACAAA
CTCTATTCCCAATCTGTTGACGAATTTCCCAATGACACAATATTGATGGT
GGAGTGGTTGGAGACTCGATACGAGATGGGGCAGCGGCTGGTTGTTCGCG
AATCTCTAAATAGGCTTGCCGATCATACAAAGAACTTCGACATCCTTCTT
TCCGCCGCTCGCATAAATATAGATTTTGGGGACTACGTGGTCGCGAAGAA
ACAACTTGCAGCTGCCGAGGAAATTCGCGGGTTGTCCCCGGGGATTGTAG
TTGAAAAAGCACGAATGGCCTTGGCAGTGGGGCAGTTCGATGAGGCTATC
CAGCAGTTGTTAGCAATAGCAGATGCGGTCTCTGAGGATGCGGCAGTACA
GCTTCTTTTGCTGGAGGCTTATATCGGTGCAAAGAACGCCGCCGGGCAAG
TGAATGTTGGAAAGACGCTTGCAAAGAAGTTTAGAGGTTCCTACGCCCAA
GCAATGAGCAGGGGGCTAACGGACCTCTCGAAAGGACGGAATCGTGAGGC
TAGAAACGCCTTCGAACGAGCAATAAAGGTTGGTGGAGAAACGCTGTCGG
CTCTACAAAAGGCCGACACGTTAGCGTTGATGGCACAGACCGTTCGAAAC
GAGGACCCCGAAACTGCAAAGACTTTACTCAGGCAGGCATTACTATTGGA
CGTGATGAATCCCGGAGCGAACTTCGTGTCGGGAAATATTGCGTTT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig97473:23..1018- >mRNA_P-canaliculata_contig97473.23829.1 ID=mRNA_P-canaliculata_contig97473.23829.1|Name=mRNA_P-canaliculata_contig97473.23829.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1950bp|location=Sequence derived from alignment at P-canaliculata_contig97473:23..1018- (Pelvetia canaliculata dioecious) ATGCCTGATGATCCTCTCGCGCTTGCCGTTCGTGCCAATATCGAGCTCCG GCAAGGTCATCCAGAGGCCGCGGCTAGACGGCTCAAGCCGATCGTAAATA GCGTTGCACCAGACAAGGTGATAGCCGTGTATGCGCTGAGTCTTTTTGAA ATTGGGCGACAAGAGGAAGCCATCGCCATGCTTACCAAACGCGTCGAAGC CGAGGCGAAGGCCTTTCACTCTAGATTAGCTCTAGCGCGAATGTACAGAC AGCTTGGAAAACGTCCATTTGCCGACAAACTCTATTCCCAATCTGTTGAC GAATTTCCCAATGACACAATATTGATGGTGGAGTGGTTGGAGACTCGATA CGAGATGGGGCAGCGGCTGGTTGTTCGCGAATCTCTAAATAGGCTTGCCG ATCATACAAAGAACTTCGACATCCTTCTTTCCGCCGCTCGCATAAATATA GATTTTGGGGACTACGTGGTCGCGAAGAAACAACTTGCAGCTGCCGAGGA AATTCGCGGGTTGTCCCCGGGGATTGTAGTTGAAAAAGCACGAATGGCCT TGGCAGTGGGGCAGTTCGATGAGGCTATCCAGCAGTTGTTAGCAATAGCA GATGCGGTCTCTGAGGATGCGGCAGTACAGCTTCTTTTGCTGGAGGCTTA TATCGGTGCAAAGAACGCCGCCGGGCAAGTGAATGTTGGAAAGACGCTTG CAAAGAAGTTTAGAGGTTCCTACGCCCAAGCAATGAGCAGGGGGCTAACG GACCTCTCGAAAGGACGGAATCGTGAGGCTAGAAACGCCTTCGAACGAGC AATAAAGGTTGGTGGAGAAACGCTGTCGGCTCTACAAAAGGCCGACACGT TAGCGTTGATGGCACAGACCGTTCGAAACGAGGACCCCGAAACTGCAAAG ACTTTACTCAGGCAGGCATTACTATTGGACGTGATGAATCCCGGAGCGAA CTTCGTGTCGGGAAATATTGCGTTTATGCCTGATGATCCTCTCGCGCTTG CCGTTCGTGCCAATATCGAGCTCCGGCAAGGTCATCCAGAGGCCGCGGCT AGACGGCTCAAGCCGATCGTAAATAGCGTTGCACCAGACAAGGTGATAGC CGTGTATGCGCTGAGTCTTTTTGAAATTGGGCGACAAGAGGAAGCCATCG CCATGCTTACCAAACGCGTCGAAGCCGAGGCGAAGGCCTTTCACTCTAGA TTAGCTCTAGCGCGAATGTACAGACAGCTTGGAAAACGTCCATTTGCCGA CAAACTCTATTCCCAATCTGTTGACGAATTTCCCAATGACACAATATTGA TGGTGGAGTGGTTGGAGACTCGATACGAGATGGGGCAGCGGCTGGTTGTT CGCGAATCTCTAAATAGGCTTGCCGATCATACAAAGAACTTCGACATCCT TCTTTCCGCCGCTCGCATAAATATAGATTTTGGGGACTACGTGGTCGCGA AGAAACAACTTGCAGCTGCCGAGGAAATTCGCGGGTTGTCCCCGGGGATT GTAGTTGAAAAAGCACGAATGGCCTTGGCAGTGGGGCAGTTCGATGAGGC TATCCAGCAGTTGTTAGCAATAGCAGATGCGGTCTCTGAGGATGCGGCAG TACAGCTTCTTTTGCTGGAGGCTTATATCGGTGCAAAGAACGCCGCCGGG CAAGTGAATGTTGGAAAGACGCTTGCAAAGAAGTTTAGAGGTTCCTACGC CCAAGCAATGAGCAGGGGGCTAACGGACCTCTCGAAAGGACGGAATCGTG AGGCTAGAAACGCCTTCGAACGAGCAATAAAGGTTGGTGGAGAAACGCTG TCGGCTCTACAAAAGGCCGACACGTTAGCGTTGATGGCACAGACCGTTCG AAACGAGGACCCCGAAACTGCAAAGACTTTACTCAGGCAGGCATTACTAT TGGACGTGATGAATCCCGGAGCGAACTTCGTGTCGGGAAATATTGCGTTT back to top
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