mRNA_P-canaliculata_contig97419.23827.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: A0A2G5IC14_CERBT (HTH CENPB-type domain-containing protein n=5 Tax=Cercospora TaxID=29002 RepID=A0A2G5IC14_CERBT) HSP 1 Score: 253 bits (646), Expect = 4.790e-77 Identity = 165/290 (56.90%), Postives = 194/290 (66.90%), Query Frame = 1 Query: 1 WPSLLQQQPPSVSTAFPPPYVSQL-PYAPASAPPAPGPGSGHQLHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPD----AVSPSQTPYDVSPISPPDVVSP---ELQRPGARGRDSPAAADRPRSVPFH-----HSHSTTSLRSAFTDPNRSPFSSPRPLSP 828 WPS+L +Q P+ ++PP Y + P P SA P L TPVSATS RS S PR+TLTD DR+RMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++KY+ DDG +SPVKR KGRSPDIERALA WA+ +E+KG PL D MIR +ARAFAATTT PD+H TLS W+ KFKLKNNL+GARS K AP+D D S S TP D SPISP + SP +LQR ++ + D H HS STTSL SAFTD S FS P PLSP Sbjct: 76 WPSMLNRQGPA---SYPPIYQQPVQPLQPMSAGP---------LLTPVSATSTRSTSTPRKTLTDLDRKRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKYLFQDDGSRSPVKRAKGRSPDIERALAVWAKNQEKKGNPLSDDMIRAQARAFAATTTSPDNHV--TLSSSWIEKFKLKNNLMGARSRKASLAPDDADFGAAVSSSSHTPGDTSPISPSGLGSPSPIDLQRVQSQESLKNESPDDYIDFGNHRHGVFHSQSTTSLNSAFTDTAPSSFS-PGPLSP 350
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: A0A150UUS1_9PEZI (HTH CENPB-type domain-containing protein n=1 Tax=Acidomyces richmondensis BFW TaxID=766039 RepID=A0A150UUS1_9PEZI) HSP 1 Score: 248 bits (632), Expect = 4.170e-76 Identity = 145/246 (58.94%), Postives = 174/246 (70.73%), Query Frame = 1 Query: 127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPD----AVSPSQTPYDVSPISPPDVVSPE-LQRPGARGRDS------PAAADRPRSVPFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828 + TP+SA S+RS S PR+TLTD DRRRMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++KY+ D+G +SPVKR KGRSPDIERALA WA+ +E+KG PL D +IR+KARAFAATTT PD+H LS W+ KFKLKNNL+GARS KG AP+D + A S S TP VSP+SPP SP + A+ ++S + D R HS S TSL SAFTD S SP PLSP Sbjct: 4 VQTPISAVSSRSGSTPRKTLTDQDRRRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKYLAHDEGSKSPVKRAKGRSPDIERALAVWAKNQEKKGMPLTDEIIRDKARAFAATTTSPDNHT--VLSSSWIEKFKLKNNLMGARSRKGSLAPDDAEGISAATSSSHTPNGVSPVSPPAPGSPSPIDLHSAKSQESLKNESPDSFLDYTRRTGPFHSQSATSLNSAFTDTAPSSSFSPGPLSP 247
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: UPI001D851F81 (uncharacterized protein n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI001D851F81) HSP 1 Score: 241 bits (616), Expect = 9.630e-73 Identity = 147/246 (59.76%), Postives = 178/246 (72.36%), Query Frame = 1 Query: 127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDA---VSPSQTPYDVSPISPPDVVSPE-LQRPGARGRDS--PAAADR-----PRSVPFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828 LHTPVSATS RS S PR+TLTD DR+RMC+YAEE+P++KQTEIGA+FGVERSTVSKVLR +++Y+ DDG +SP+KR KGRSPDIERALA WA+ +ER+G PL D +IR+KARAF+ATTT ++H TLS W+ KFKLKNNL+GARS K A ++ A S S TP D SP+SP + SP LQ A+ +DS ++D R PFH S STTSL SAFTD S FS P PLSP Sbjct: 106 LHTPVSATSTRSTSTPRKTLTDMDRKRMCQYAEEHPNAKQTEIGAIFGVERSTVSKVLRQKERYLFQDDGSRSPIKRTKGRSPDIERALAVWAKNQERRGLPLTDELIRDKARAFSATTTTTENHV--TLSSSWIEKFKLKNNLMGARSRKASLAADEDSASAAASSSHTPGDASPVSPSGIRSPSPLQLHHAQSQDSLQNESSDSYLEFGSRHGPFH-SQSTTSLNSAFTDTAPSSFS-PGPLSP 347
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: M2M0P6_BAUPA (HTH CENPB-type domain-containing protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2M0P6_BAUPA) HSP 1 Score: 241 bits (616), Expect = 1.110e-72 Identity = 146/248 (58.87%), Postives = 175/248 (70.56%), Query Frame = 1 Query: 127 LHTPVSATSARSSG-PRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDAVSP----SQTPYDVSPISPPDVVSPE-LQRPGARGRDSPAAADRP--------RSVPFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828 L TPVSA S++SS PR+TLTD DR+RMC+YAE+NP+SKQTEIGA+FGVERSTVSKVLR ++KY+ DDG +SPVKR KGRSPDIERALA WA+ +ERKG PL D +IREKARAFA+T++ P+ H+ +S W+ KFKLKNNL+GARS KG AP+D D +S S TP SP+SP V SP + R ++S D P R PFH S S TSL SAFTD S FS P PLSP Sbjct: 104 LQTPVSAVSSKSSSTPRKTLTDLDRKRMCQYAEDNPNSKQTEIGAIFGVERSTVSKVLRQKEKYLCQDDGSRSPVKRAKGRSPDIERALAVWAKNQERKGMPLTDEVIREKARAFASTSSTPESHH--VVSSSWIEKFKLKNNLMGARSRKGSLAPDDADVLSATASSSHTPCGTSPVSPQGVGSPSPVDLHSTRSQES-LRNDSPGGYLDFSGRHGPFH-SQSATSLNSAFTDTAPSSFS-PGPLSP 346
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: N1Q0V1_DOTSN (HTH CENPB-type domain-containing protein n=1 Tax=Dothistroma septosporum (strain NZE10 / CBS 128990) TaxID=675120 RepID=N1Q0V1_DOTSN) HSP 1 Score: 240 bits (613), Expect = 2.560e-72 Identity = 145/245 (59.18%), Postives = 171/245 (69.80%), Query Frame = 1 Query: 127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDA---VSPSQTPYDVSPISPPDVVSPE-LQRPGARGRDSPAAADRPRSVPF------HHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828 LHTPVSATS RS S PR+TLTD DR+RMC+YAEE+P++KQTEIGA+FGVERSTVSKVLR ++KY+ DDG +SP+KR KGRSPDIERALA WA+ +ER+G PL D +IR+KARAF+ATTT PDH TLS W+ KFKLKNNL+GARS K A ++ A S S TP D SP+SP V S L+ A +DS + F HS ST SL SAFTD S FS P PLSP Sbjct: 106 LHTPVSATSTRSTSTPRKTLTDMDRKRMCQYAEEHPNAKQTEIGAIFGVERSTVSKVLRQKEKYLFQDDGSRSPIKRTKGRSPDIERALAVWAKNQERRGLPLTDDLIRDKARAFSATTTTPDHQV--TLSASWIEKFKLKNNLMGARSRKASLAADEDSASAVASSSHTPGDASPVSPSGVGSASPLELHHAPSQDSLKNGSPDSYLEFGSRRGPFHSQSTNSLNSAFTDTAPSSFS-PGPLSP 347
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: N1QL74_SPHMS (HTH CENPB-type domain-containing protein n=1 Tax=Sphaerulina musiva (strain SO2202) TaxID=692275 RepID=N1QL74_SPHMS) HSP 1 Score: 240 bits (612), Expect = 4.810e-72 Identity = 143/247 (57.89%), Postives = 172/247 (69.64%), Query Frame = 1 Query: 127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPD----AVSPSQTPYDVSPISPPDVVSPE-LQRPGARGRDSPAAADRPRSVPF-------HHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828 L TP+SATS +S S PR+TLTD DR+RMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++K++ DDG +SPVKR KGRSPDIERALA WA+ +E+KG PL D +IR +ARAFAATT+ PDH + LS W+GKFKLKNNLLGARS K P+DPD A S S TP D+SP SP SP + A+ +S F HH+ STTSL SA+T+ S FS P PLSP Sbjct: 110 LMTPLSATSTKSTSTPRKTLTDLDRKRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKFLFQDDGSRSPVKRAKGRSPDIERALAVWAKNQEKKGNPLSDDLIRAQARAFAATTSSPDHLVS--LSSSWIGKFKLKNNLLGARSRKTSLVPDDPDHPAAASSSSHTPGDLSPTSPSXXXSPSPIDLQSAQSYESQKRGSPDDYFDFASNRNGPHHAQSTTSLHSAYTENGPSSFS-PGPLSP 353
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: A0A6A6BWR4_9PEZI (HTH CENPB-type domain-containing protein n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6BWR4_9PEZI) HSP 1 Score: 239 bits (611), Expect = 6.610e-72 Identity = 145/247 (58.70%), Postives = 174/247 (70.45%), Query Frame = 1 Query: 127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDA---VSPSQTPYDVSPISPPDVVSPE-LQRPGARGRDSPAAADRPRSV--------PFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828 L TPVSATS+RS S PR+TLTD DR+RMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++KY+ DDG +SP+KR KGRSPDIERALA WA+ +E+KG PL D +IREKARAF+ATTT PD+H LS W+ KFKLKNNL+GARS K A ++ A S S TP D SP+SP + SP L+ + +S + P S PFH S ST SL SAFTD S FS P P+SP Sbjct: 107 LQTPVSATSSRSTSTPRKTLTDMDRKRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKYLFQDDGSRSPIKRAKGRSPDIERALAVWAKNQEKKGNPLSDDLIREKARAFSATTTSPDNHV--ALSSSWIEKFKLKNNLMGARSRKASLAADEDGASAAASSSHTPGDTSPVSPSGIGSPSPLELHSTQSHES-LKNESPDSYLDFGSRHGPFH-SQSTNSLNSAFTDTAPSSFS-PGPISP 348
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: A0A6H0XMV5_9PEZI (HTH CENPB-type domain-containing protein n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XMV5_9PEZI) HSP 1 Score: 238 bits (607), Expect = 2.200e-71 Identity = 142/245 (57.96%), Postives = 170/245 (69.39%), Query Frame = 1 Query: 127 LHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDAV------SPSQTPYDVSPISPPDVVSPELQRPGA----RGRDSPAAADRPRSVPFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828 + TPVSA+S+RS S PR+TLTD+DR+RMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++KY+ DDG +SPVKR KGRSPDIERALA WA+ +E+KG PL D +IREKARAFAATT P++H +S W+ KFKLKNNL+GARS K AP+D D V S + SP+ P ELQ + R D P +PFH S STTSL SAFTD S FS P PLSP Sbjct: 105 IPTPVSASSSRSLSTPRKTLTDHDRKRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKYLLQDDGSRSPVKRAKGRSPDIERALAIWAKNQEKKGLPLSDDLIREKARAFAATTATPENHV--AMSASWIEKFKLKNNLMGARSRKSSLAPDDTDNVAGIFGASSAAGTSPSSPVPAPSTSPVELQGAASHENLRNESPDGYIDFPGRLPFH-SQSTTSLNSAFTDTAPSSFS-PGPLSP 345
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: A0A1Z5SU19_HORWE (HTH CENPB-type domain-containing protein n=11 Tax=Hortaea werneckii TaxID=91943 RepID=A0A1Z5SU19_HORWE) HSP 1 Score: 236 bits (603), Expect = 1.250e-70 Identity = 145/248 (58.47%), Postives = 175/248 (70.56%), Query Frame = 1 Query: 121 HQLHTPVSATSARSSG-PRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTT---QPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDAVSPSQTPYDVSPISPPDVVSPE--LQRPGARGRD-----SPAA-ADRPRSVPFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828 +QLHTPVSA SARS+ PR+TLTD+DR+RMC+YAE++P++KQTEIGA+FGVERSTVSKVLR +DKY+ +DG +SPVKR KGRSPDIERALA WA+ +ERK PL D +IR+KARAF+ATTT PD+H+ LSP WL KFKLK+NL+GARS K APED +++S TP S S P + P L +R +D SP D S HS S TSL SAFTD S FS P PLSP Sbjct: 103 NQLHTPVSAISARSAPIPRKTLTDSDRKRMCQYAEDHPNAKQTEIGAIFGVERSTVSKVLRQKDKYLIQEDGSKSPVKRAKGRSPDIERALAVWAKNQERKCLPLTDELIRDKARAFSATTTTTKSPDNHH--ALSPIWLEKFKLKHNLMGARSRKSSLAPEDAESISTCHTPGGASSPSSPRALGPTSPLDLDTSRSQDAFKHESPDNYLDYTTSRGPFHSQSATSLNSAFTDTAPSSFS-PGPLSP 347
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Match: N1QAT8_PSEFD (HTH CENPB-type domain-containing protein (Fragment) n=4 Tax=Pseudocercospora TaxID=131324 RepID=N1QAT8_PSEFD) HSP 1 Score: 235 bits (600), Expect = 1.350e-70 Identity = 159/289 (55.02%), Postives = 186/289 (64.36%), Query Frame = 1 Query: 1 WPSLLQQQPPSVSTAFPPPYVSQLPYAPASAPPAPGPGSGHQLHTPVSATSARS-SGPRRTLTDNDRRRMCRYAEENPHSKQTEIGAVFGVERSTVSKVLRHRDKYMTPDDGGQSPVKRGKGRSPDIERALANWARKEERKGAPLDDGMIREKARAFAATTTQPDHHYNYTLSPHWLGKFKLKNNLLGARSGKGPHAPEDPDAV----SPSQTPYDVSPISPPDVVSPE------LQRPGARGRDSPAAADRPRSV--PFHHSHSTTSLRSAFTDPNRSPFSSPRPLSP 828 WPSLL QP S P V P P S P L TPVSA +RS S PR+TLTD DR+RMC+YAEE+P+SKQTEIGA+FGVERSTVSKVLR ++KY+ DDG +SPVKR KGRSPDIERALA WA+ +E+KG PL D +IR++ARAFAATTT ++H LS W+ KFKLKNNL+GARS K AP+D D S S TP D SPISP + SP +Q + +SP + S PFH S ST SL SAFTD S FS P PLSP Sbjct: 47 WPSLLNSQPHSTYQPMYPQPVQ--PIQPMSIGP---------LVTPVSAAPSRSTSTPRKTLTDLDRKRMCQYAEEHPNSKQTEIGAIFGVERSTVSKVLRQKEKYLFQDDGSRSPVKRAKGRSPDIERALAVWAKNQEKKGNPLTDHLIRQQARAFAATTTMAENHV--ALSSSWIEKFKLKNNLMGARSRKASLAPDDLDGSAAQSSSSHTPGDTSPISPGALGSPSPIELHSVQSQESLKNESPDSYLEFGSTHGPFH-SQSTNSLNSAFTDTAPSSFS-PGPLSP 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97419.23827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97419.23827.1 >prot_P-canaliculata_contig97419.23827.1 ID=prot_P-canaliculata_contig97419.23827.1|Name=mRNA_P-canaliculata_contig97419.23827.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=297bp WPSLLQQQPPSVSTAFPPPYVSQLPYAPASAPPAPGPGSGHQLHTPVSATback to top mRNA from alignment at P-canaliculata_contig97419:10..1081+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig97419.23827.1 ID=mRNA_P-canaliculata_contig97419.23827.1|Name=mRNA_P-canaliculata_contig97419.23827.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1072bp|location=Sequence derived from alignment at P-canaliculata_contig97419:10..1081+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig97419:10..1081+ >mRNA_P-canaliculata_contig97419.23827.1 ID=mRNA_P-canaliculata_contig97419.23827.1|Name=mRNA_P-canaliculata_contig97419.23827.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1782bp|location=Sequence derived from alignment at P-canaliculata_contig97419:10..1081+ (Pelvetia canaliculata dioecious)back to top |