mRNA_P-canaliculata_contig97309.23814.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig97309.23814.1 vs. uniprot
Match: A0A5C6CW91_9BACT (BON domain protein n=1 Tax=Bythopirellula polymerisocia TaxID=2528003 RepID=A0A5C6CW91_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 1.210e-12 Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 34 TSVDSLRQRLREHFEKLGYPQLQSIECEVAGDTVKLTGQLDSFYLKQVVQSVAVKLAGSHSIENLIEVN 240
T L +R++ F LGYPQL ++ C+ G T+ TG L+S+YLKQ+ Q++A+K+ G + N IEVN
Sbjct: 12 TDPTELVERVKATFAGLGYPQLANVACDAQGSTIYFTGVLNSYYLKQIAQTLAIKVPGVRRVVNNIEVN 80
BLAST of mRNA_P-canaliculata_contig97309.23814.1 vs. uniprot
Match: A0A5B9QH45_9BACT (BON domain protein n=1 Tax=Bythopirellula goksoeyrii TaxID=1400387 RepID=A0A5B9QH45_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 1.330e-11 Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = 1 Query: 49 LRQRLREHFEKLGYPQLQSIECEVAGDTVKLTGQLDSFYLKQVVQSVAVKLAGSHSIENLIEVN 240
L ++++ +KLGYP+L++I C + L G L S+YLKQVVQ++A+K+ G H + N IEV+
Sbjct: 14 LAEKVKNSIDKLGYPELKNIRCRAHQSDIHLQGHLASYYLKQVVQTIAIKVPGVHKVINDIEVS 77
BLAST of mRNA_P-canaliculata_contig97309.23814.1 vs. uniprot
Match: UPI0013875108 (BON domain-containing protein n=1 Tax=Roseimaritima sediminicola TaxID=2662066 RepID=UPI0013875108) HSP 1 Score: 53.9 bits (128), Expect = 1.310e-7 Identity = 23/64 (35.94%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 46 SLRQRLREHFEKLGYPQLQSIECEVAGDTVKLTGQLDSFYLKQVVQSVAVKLAGSHSIENLIEV 237
S++++ + ++ Y L++++C V DT++LTGQ+ SF+LKQ Q + +AG+ I+N +EV
Sbjct: 25 SIQRQAQARLQQSSYALLRNVDCTVTSDTLQLTGQIPSFFLKQTAQELVRDVAGAKRIKNELEV 88
BLAST of mRNA_P-canaliculata_contig97309.23814.1 vs. uniprot
Match: A0A517ZUK1_9PLAN (BON domain protein n=3 Tax=Symmachiella dynata TaxID=2527995 RepID=A0A517ZUK1_9PLAN) HSP 1 Score: 53.5 bits (127), Expect = 2.270e-7 Identity = 24/67 (35.82%), Postives = 40/67 (59.70%), Query Frame = 1 Query: 37 SVDSLRQRLREHFEKLGYPQLQSIECEVAGDTVKLTGQLDSFYLKQVVQSVAVKLAGSHSIENLIEV 237
S D L +R+ ++LG +L + CE G T+ L G +S+Y KQ+ Q++A K+ G H + N ++V
Sbjct: 30 SKDQLAERVWNSMQRLGVHRLTRVRCESRGTTIVLRGTANSYYQKQLAQTIAAKVPGVHHVINQLQV 96
BLAST of mRNA_P-canaliculata_contig97309.23814.1 vs. uniprot
Match: UPI0019BE34A8 (BON domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019BE34A8) HSP 1 Score: 48.5 bits (114), Expect = 1.510e-5 Identity = 21/59 (35.59%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 61 LREHFEKLGYPQLQSIECEVAGDTVKLTGQLDSFYLKQVVQSVAVKLAGSHSIENLIEV 237
++E + G+ +L+ + E GDTV ++G++ +FYLKQ+VQS+A+ G + N ++V
Sbjct: 30 IQEALNRTGHGELRRVGLECEGDTVTISGRVPTFYLKQLVQSIALAALGVERVINQLDV 88
BLAST of mRNA_P-canaliculata_contig97309.23814.1 vs. uniprot
Match: A0A5K7XIG1_9BACT (BON domain-containing protein n=1 Tax=Lacipirellula parvula TaxID=2650471 RepID=A0A5K7XIG1_9BACT) HSP 1 Score: 48.5 bits (114), Expect = 2.480e-5 Identity = 23/55 (41.82%), Postives = 35/55 (63.64%), Query Frame = 1 Query: 73 FEKLGYPQLQSIECEVAGDTVKLTGQLDSFYLKQVVQSVAVKLAGSHSIENLIEV 237
E LGYP L S+ C A + + L+G + S+YLKQ+ Q A+++AGS + N + V
Sbjct: 56 LESLGYPVLGSVSCAAAQEGLVLSGAVPSYYLKQMAQVAALRVAGSVRVVNRLIV 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97309.23814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97309.23814.1 >prot_P-canaliculata_contig97309.23814.1 ID=prot_P-canaliculata_contig97309.23814.1|Name=mRNA_P-canaliculata_contig97309.23814.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=81bp MPDPQASKDQPTSVDSLRQRLREHFEKLGYPQLQSIECEVAGDTVKLTGQback to top mRNA from alignment at P-canaliculata_contig97309:512..754- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig97309.23814.1 ID=mRNA_P-canaliculata_contig97309.23814.1|Name=mRNA_P-canaliculata_contig97309.23814.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=243bp|location=Sequence derived from alignment at P-canaliculata_contig97309:512..754- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig97309:512..754- >mRNA_P-canaliculata_contig97309.23814.1 ID=mRNA_P-canaliculata_contig97309.23814.1|Name=mRNA_P-canaliculata_contig97309.23814.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=486bp|location=Sequence derived from alignment at P-canaliculata_contig97309:512..754- (Pelvetia canaliculata dioecious)back to top |