mRNA_P-canaliculata_contig9724.23810.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: D8LIZ2_ECTSI (Oligopeptidase A (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ2_ECTSI) HSP 1 Score: 397 bits (1021), Expect = 1.340e-133 Identity = 187/226 (82.74%), Postives = 204/226 (90.27%), Query Frame = 1 Query: 7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQ 678
+ERRKEELYAFSEE+LRPYF LP+ MFDLAGRLFGVS+T ADGEAE WNPDVRFF+IKD SG+HVASFYLDAYSRPENKRGGAWMGVC+G S+ALGR PVAYLTCNGSPPVG+TPSLMTFRE VETLFHEFGHGLQHMLT M DGDC+GI+G+EWDAVELPSQFMENWCYH+PTVDQFA+H+ET ETLP +LF+KLCAQRTYMAGSAMLRQLYFGQ
Sbjct: 387 SERRKEELYAFSEEDLRPYFSLPEVLEGMFDLAGRLFGVSITPADGEAEVWNPDVRFFNIKDTASGEHVASFYLDAYSRPENKRGGAWMGVCIGASKALGRSPVAYLTCNGSPPVGDTPSLMTFRE-------VETLFHEFGHGLQHMLTTMVDGDCAGINGVEWDAVELPSQFMENWCYHKPTVDQFAKHHETGETLPKELFDKLCAQRTYMAGSAMLRQLYFGQ 605
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A6U4CXW2_9STRA (Oligopeptidase A n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CXW2_9STRA) HSP 1 Score: 320 bits (821), Expect = 2.420e-102 Identity = 149/227 (65.64%), Postives = 183/227 (80.62%), Query Frame = 1 Query: 7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
+ER++E+LY++++EELRPYF L + +F LA RLFGV++ A+G+AE W+ DV F+ +KD +G+H+ASF+LD YSRP KRGGAWM VC+GRS+ L R PVAYLTCNGSPPVG+ PSLMTFRE VETLFHEFGHGLQHMLT +EDGD +GI+ +EWDAVELPSQFMENWCY + T+ FA HYETNE LP DLF+KLC R +MAG+AMLRQLYFGQ+
Sbjct: 364 SERQREKLYSYTDEELRPYFSLGKVLPGLFGLAERLFGVTIEEANGDAEVWHEDVSFYKVKDTTTGEHIASFFLDPYSRPAEKRGGAWMDVCIGRSKVLSRKPVAYLTCNGSPPVGDKPSLMTFRE-------VETLFHEFGHGLQHMLTDVEDGDAAGINNVEWDAVELPSQFMENWCYDKKTLMGFAVHYETNEPLPDDLFQKLCDSRHFMAGNAMLRQLYFGQM 583
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A812XK02_SYMPI (OOP protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XK02_SYMPI) HSP 1 Score: 310 bits (795), Expect = 9.500e-102 Identity = 147/226 (65.04%), Postives = 171/226 (75.66%), Query Frame = 1 Query: 10 ERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
ER KEE YA+ EE LRPYF LP+ MF +A +LFGV + D AE W+PDV FF +KD + DH+ASF+LD Y+RP KRGGAWM C+GRS+A+G PVAYLTCNGSPPVG PSLMTF EA ETLFHEFGHGLQHMLT +EDGDC+GI+ +EWDAVELPSQFMENW YH+PTVD FA HYET E LP+D+FEK+ R +MA S MLRQL FG +
Sbjct: 112 ERLKEEKYAYDEEALRPYFSLPKVLEGMFGIANKLFGVDIVQDDDAAERWHPDVMFFKVKDADTRDHIASFFLDPYARPGEKRGGAWMDDCLGRSKAIGTKPVAYLTCNGSPPVGTKPSLMTFSEA-------ETLFHEFGHGLQHMLTHVEDGDCAGINNVEWDAVELPSQFMENWLYHKPTVDSFAVHYETGEPLPADIFEKIKGSRIFMAASMMLRQLQFGAL 330
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A7S1YUM4_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YUM4_TRICV) HSP 1 Score: 306 bits (784), Expect = 1.070e-99 Identity = 150/228 (65.79%), Postives = 174/228 (76.32%), Query Frame = 1 Query: 7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGR-LPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
+ER KE + +EEELRPYF LP MF L R+F V V AADGEAE W+PDVRFF++KD +G +ASFYLD +SRP +KRGGAWM VC+G+S A R +PVAYLTCNGSPPVG+TPSLMTFRE VETLFHEFGHGLQHMLT GD +GI+G+EWDAVELPSQFMENWCY +PTV FARH+ET E LP ++FEKL Q+TY AG RQLYFGQ+
Sbjct: 222 SERLKETKFDLTEEELRPYFALPAVLDGMFGLVRRIFDVEVVAADGEAEVWHPDVRFFNVKDASTGKRIASFYLDPFSRPADKRGGAWMDVCIGKSEACDRDVPVAYLTCNGSPPVGDTPSLMTFRE-------VETLFHEFGHGLQHMLTEASVGDVAGINGVEWDAVELPSQFMENWCYDKPTVYGFARHHETGEPLPEEMFEKLKEQKTYGAGMMACRQLYFGQL 442
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A836CFP0_9STRA (Oligopeptidase A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFP0_9STRA) HSP 1 Score: 312 bits (799), Expect = 1.640e-99 Identity = 157/229 (68.56%), Postives = 175/229 (76.42%), Query Frame = 1 Query: 1 YRAERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
Y AER+KEELYAFSEEELRPYFPLP+ MF+ A LFGVS+ ADGE ETW+PDVRFF + D SG +ASFYLD YSRPENKRGGAWM VC+GRS L RLPVAYLTCNG+PPV + PSLMTFRE VETLFHEFGHGLQHMLT + D +GI+GIEWDAVELPSQFMEN+ V RHY+T E LP DL KL AQ+TYMA S +LRQLYFGQ+
Sbjct: 319 YWAERQKEELYAFSEEELRPYFPLPEVLGGMFETARTLFGVSIVPADGETETWHPDVRFFHVNDAASGARIASFYLDPYSRPENKRGGAWMDVCVGRSAVLDRLPVAYLTCNGTPPVADAPSLMTFRE-------VETLFHEFGHGLQHMLTKVPFADAAGINGIEWDAVELPSQFMENFVLEDALVTW--RHYQTKEPLPKDLQAKLKAQKTYMAASGILRQLYFGQL 538
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: I2CQQ3_NANGC (Oligopeptidase A n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQQ3_NANGC) HSP 1 Score: 314 bits (805), Expect = 6.460e-99 Identity = 149/227 (65.64%), Postives = 171/227 (75.33%), Query Frame = 1 Query: 7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
AER KE Y EEELRPYF LP +F L+ R+FG+ + AADGE E W+P VRF+ + D S +H+ASFYLD YSRPENKRGGAWM VC G+SR LGR PVAYLTCNGSPPVG+TPSLMTFRE VETLFHEFGHG QHMLT + GD +GI+G+EWDAVELPSQFMENWCY +PT ARHY+T E LP D+F KL A + Y AG MLRQLYFG++
Sbjct: 464 AERMKEGKYGIKEEELRPYFALPNVLDGLFSLSRRIFGIEIVAADGEVEVWDPAVRFYKVLDAESQEHIASFYLDPYSRPENKRGGAWMDVCTGKSRVLGRKPVAYLTCNGSPPVGDTPSLMTFRE-------VETLFHEFGHGAQHMLTEVAHGDAAGINGVEWDAVELPSQFMENWCYDKPTFYGLARHYQTGEPLPEDIFAKLVALKHYNAGMTMLRQLYFGKM 683
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A812R6V4_9DINO (OOP protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812R6V4_9DINO) HSP 1 Score: 306 bits (784), Expect = 1.060e-98 Identity = 144/226 (63.72%), Postives = 172/226 (76.11%), Query Frame = 1 Query: 10 ERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
ER KEE YA+ EE LRPYF LP+ MF +A +LF V + + AE W+PDV FF ++D +G+H+ASF+LD Y+RP KRGGAWM C+GRS+A+G PVAYLTCNGSPPVG+ PSLMTF EA ETLFHEFGHGLQHMLT +EDGDC+GI+ +EWDAVELPSQFMENW YH+PTVD FA HYET E LP+D+FEK+ R +MA S MLRQL FG +
Sbjct: 197 ERLKEEKYAYDEEALRPYFSLPKVLEGMFGIASKLFAVDIVQDNDAAERWHPDVMFFKVQDASTGNHIASFFLDPYARPGEKRGGAWMDDCLGRSKAVGTKPVAYLTCNGSPPVGSKPSLMTFSEA-------ETLFHEFGHGLQHMLTHVEDGDCAGINNVEWDAVELPSQFMENWLYHKPTVDSFAVHYETGEPLPADVFEKIKGSRIFMAASMMLRQLQFGDL 415
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A7S2WWB3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWB3_9STRA) HSP 1 Score: 301 bits (772), Expect = 4.450e-98 Identity = 144/229 (62.88%), Postives = 171/229 (74.67%), Query Frame = 1 Query: 7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQ--FARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
+ER+ E L+ F EEELRPYF LP +F L R++GV + ADGEA W+PDV+FF + D+ SG+H+ASFYLD YSRPE+KRGGAWM VC+G+S+AL R PVAYLTCNGSPPVG+ PSLMTF E V TLFHE GHGLQHMLT + G +GI+G+EWDAVELPSQFMENWCY T+ A+HYET E LP F+KLC Q+TY AG AMLRQLYFG +
Sbjct: 98 SERQSEALFGFEEEELRPYFALPNVLNGLFGLCKRIYGVDIVRADGEAPIWHPDVQFFRVMDEESGEHIASFYLDPYSRPESKRGGAWMDVCVGKSQALDRKPVAYLTCNGSPPVGDKPSLMTFNE-------VTTLFHETGHGLQHMLTQVMHGPAAGINGVEWDAVELPSQFMENWCYDESTLYDAGLAKHYETGEPLPRHFFDKLCEQKTYQAGMAMLRQLYFGAM 319
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A7S2C0M6_9DINO (Oligopeptidase A (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2C0M6_9DINO) HSP 1 Score: 305 bits (781), Expect = 1.240e-97 Identity = 147/229 (64.19%), Postives = 172/229 (75.11%), Query Frame = 1 Query: 1 YRAERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGRLPVAYLTCNGSPPVGNTPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
Y AER KEE +A+ EE LRPYF LP+ MF +A +LFGV++ D AE W+PDV FF + D + +H+ASFYLD YSRP +KRGGAWM C+GRSRALG PVAYLTCNGSPPVG PSLMTF EA ETLFHEFGHGLQHMLT +E+GD +GI+ +EWDAVELPSQFMENW YH+ TVD FA HYET E LPSD+F+K+ R +MAGS MLRQL G +
Sbjct: 360 YWAERLKEEKFAYDEEALRPYFSLPKVLDGMFGIASKLFGVTIERDDAAAERWHPDVMFFRVLDSETKEHIASFYLDPYSRPGDKRGGAWMADCLGRSRALGTKPVAYLTCNGSPPVGEKPSLMTFSEA-------ETLFHEFGHGLQHMLTRVEEGDAAGINNVEWDAVELPSQFMENWLYHKATVDSFAVHYETGEPLPSDVFDKIKGARAFMAGSFMLRQLQLGAL 581
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Match: A0A6U6EF43_9STRA (Oligopeptidase A n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6EF43_9STRA) HSP 1 Score: 308 bits (790), Expect = 1.760e-97 Identity = 152/229 (66.38%), Postives = 174/229 (75.98%), Query Frame = 1 Query: 7 AERRKEELYAFSEEELRPYFPLPQAR--MFDLAGRLFGVSVTAADGEAETWNPDVRFFSIKDKVSGDHVASFYLDAYSRPENKRGGAWMGVCMGRSRALGR-LPVAYLTCNGSPPVGN-TPSLMTFREARDGSRQVETLFHEFGHGLQHMLTAMEDGDCSGISGIEWDAVELPSQFMENWCYHRPTVDQFARHYETNETLPSDLFEKLCAQRTYMAGSAMLRQLYFGQV 681
+ER KE+ + +EEELRPYF LP MF L R+F + VTAADGEAE WN DVRFF + D +G H+ASFYLD YSRP +KRGGAWM VC+G+S A R +PVAYLTCNGSPPVG+ TPSLMTFRE VETLFHEFGHGLQHMLT GD +GI+G+EWDAVELPSQFMENWCY +PTV FA+HYET E LP D+FEKL Q+TY AG RQLYFGQ+
Sbjct: 384 SERLKEKKFDLTEEELRPYFALPAVLDGMFGLVKRIFNIEVTAADGEAEVWNDDVRFFKVNDVETGKHIASFYLDPYSRPADKRGGAWMDVCLGKSEACNRDVPVAYLTCNGSPPVGDDTPSLMTFRE-------VETLFHEFGHGLQHMLTTASVGDVAGINGVEWDAVELPSQFMENWCYDKPTVYGFAKHYETGEPLPEDMFEKLKEQKTYGAGMMSCRQLYFGQM 605 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9724.23810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9724.23810.1 >prot_P-canaliculata_contig9724.23810.1 ID=prot_P-canaliculata_contig9724.23810.1|Name=mRNA_P-canaliculata_contig9724.23810.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=231bp YRAERRKEELYAFSEEELRPYFPLPQARMFDLAGRLFGVSVTAADGEAETback to top mRNA from alignment at P-canaliculata_contig9724:6375..11521- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9724.23810.1 ID=mRNA_P-canaliculata_contig9724.23810.1|Name=mRNA_P-canaliculata_contig9724.23810.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5147bp|location=Sequence derived from alignment at P-canaliculata_contig9724:6375..11521- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9724:6375..11521- >mRNA_P-canaliculata_contig9724.23810.1 ID=mRNA_P-canaliculata_contig9724.23810.1|Name=mRNA_P-canaliculata_contig9724.23810.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1386bp|location=Sequence derived from alignment at P-canaliculata_contig9724:6375..11521- (Pelvetia canaliculata dioecious)back to top |