Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 2 |
Model size | 418 |
Cds size | 216 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817331.353834-CDS-P-canaliculata_contig97:47413..47442 | 1622817331.353834-CDS-P-canaliculata_contig97:47413..47442 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97 47414..47442 - |
1693495228.6654484-CDS-P-canaliculata_contig97:47413..47442 | 1693495228.6654484-CDS-P-canaliculata_contig97:47413..47442 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97 47414..47442 - |
1622817331.3656065-CDS-P-canaliculata_contig97:47537..47724 | 1622817331.3656065-CDS-P-canaliculata_contig97:47537..47724 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97 47538..47724 - |
1693495228.6760292-CDS-P-canaliculata_contig97:47537..47724 | 1693495228.6760292-CDS-P-canaliculata_contig97:47537..47724 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97 47538..47724 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817331.3765914-UTR-P-canaliculata_contig97:47724..47926 | 1622817331.3765914-UTR-P-canaliculata_contig97:47724..47926 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig97 47725..47926 - |
1693495228.6866055-UTR-P-canaliculata_contig97:47724..47926 | 1693495228.6866055-UTR-P-canaliculata_contig97:47724..47926 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig97 47725..47926 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97.23770.1 >prot_P-canaliculata_contig97.23770.1 ID=prot_P-canaliculata_contig97.23770.1|Name=mRNA_P-canaliculata_contig97.23770.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=72bp
MGTRGEPERRPRALTLELIREPEDVAPSTPSPSTSSSMDVGGGGGGGAGG GAIADGSGGAGDGSYHPRHHLI back to topmRNA from alignment at P-canaliculata_contig97:47414..47926- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig97.23770.1 ID=mRNA_P-canaliculata_contig97.23770.1|Name=mRNA_P-canaliculata_contig97.23770.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=513bp|location=Sequence derived from alignment at P-canaliculata_contig97:47414..47926- (Pelvetia canaliculata dioecious) CTCCCTGTCGCCTTTTCCACACTCATCGTGGCTGGGTACTCACTTTCCCG
CTTCCCACCATGACATTGACAGCTCCACTGGCGTGAATAACCCCCAACAC
GTCCACCCTCATCATCCTGGGTACTCACTTTCCCGCCTCCCACCATGACA
TTGACAGCTCCACTGGCGTGAATAACCCCCAACACGTCCACCCTCATCAT
CAATGGGCACGCGTGGTGAACCCGAACGACGTCCTAGGGCTTTGACACTT
GAGCTGATCCGCGAGCCCGAGGACGTAGCCCCATCTACGCCTTCTCCATC
CACTTCGTCATCGATGGATGTCGGCGGCGGCGGCGGCGGCGGCGCTGGTG
GAGGAGCAATCGCCGACGGAAGTGGAGGTGCCGGTGATGGTAACTTTTCC
CCCCCTATTTTTCACTTTTGTCTCTATGTCTTCCCGTCGACGTGTCTTGC
ACCCACCAGACCCCCTGACACATGGGACGGCCAGGCTCCTATCACCCCCG
TCATCATCTGATC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig97:47414..47926- >mRNA_P-canaliculata_contig97.23770.1 ID=mRNA_P-canaliculata_contig97.23770.1|Name=mRNA_P-canaliculata_contig97.23770.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=432bp|location=Sequence derived from alignment at P-canaliculata_contig97:47414..47926- (Pelvetia canaliculata dioecious) ATGGGCACGCGTGGTGAACCCGAACGACGTCCTAGGGCTTTGACACTTGA GCTGATCCGCGAGCCCGAGGACGTAGCCCCATCTACGCCTTCTCCATCCA CTTCGTCATCGATGGATGTCGGCGGCGGCGGCGGCGGCGGCGCTGGTGGA GGAGCAATCGCCGACGGAAGTGGAGGTGCCGGTGATGATGGGCACGCGTG GTGAACCCGAACGACGTCCTAGGGCTTTGACACTTGAGCTGATCCGCGAG CCCGAGGACGTAGCCCCATCTACGCCTTCTCCATCCACTTCGTCATCGAT GGATGTCGGCGGCGGCGGCGGCGGCGGCGCTGGTGGAGGAGCAATCGCCG ACGGAAGTGGAGGTGCCGGTGATGGCTCCTATCACCCCCGTCATCATCTG ATCGCTCCTATCACCCCCGTCATCATCTGATC back to top
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