mRNA_P-canaliculata_contig97.23768.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Match: R1GRS4_BOTPV (Putative mitochondrial ribosomal protein subunit l23 protein n=1 Tax=Botryosphaeria parva (strain UCR-NP2) TaxID=1287680 RepID=R1GRS4_BOTPV) HSP 1 Score: 75.9 bits (185), Expect = 3.670e-15 Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 3 Query: 138 GHKAIYLPSFSITLLRSAWLPPTYARFGVPLWFNKLDLRDYLQHVYDVKVHGV 296 G KA+YLP F++TLLR+ +LPPT+A+F VPL FNKLDLRDYL H Y V+ + Sbjct: 12 GRKAVYLPDFALTLLRTPFLPPTFAKFLVPLHFNKLDLRDYLWHAYGVRCTNI 64
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Match: A0A6A6PUP7_9PEZI (Uncharacterized protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PUP7_9PEZI) HSP 1 Score: 75.1 bits (183), Expect = 9.160e-15 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 129 WKPGHKAIYLPSFSITLLRSAWLPPTYARFGVPLWFNKLDLRDYLQHVYDVKVHGV 296 +K G K ++LP+F IT LR+ LP YARF VPLWF+KLDLRDYL H Y+V++ V Sbjct: 5 FKVGKKELFLPNFIITFLRNQTLPANYARFEVPLWFSKLDLRDYLYHAYNVRIFSV 60
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Match: A0A8E2EMQ1_9PEZI (Uncharacterized protein n=1 Tax=Glonium stellatum TaxID=574774 RepID=A0A8E2EMQ1_9PEZI) HSP 1 Score: 73.6 bits (179), Expect = 3.600e-14 Identity = 38/60 (63.33%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 105 PPTMSNFRWKPGHKAIYLPSFSITLLRSAWLPPTYARFGVPLWFNKLDLRDYLQHVYDVK 284 PP S ++ G K IYLP F ITLL + LPPT+A+F VPL FNKLDLRDYL HVY+VK Sbjct: 2 PPISSLIKF--GKKEIYLPKFIITLLHTPQLPPTHAKFLVPLNFNKLDLRDYLYHVYNVK 59
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Match: UPI000CE240B3 (54S ribosomal protein L23, mitochondrial-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE240B3) HSP 1 Score: 73.2 bits (178), Expect = 5.480e-14 Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 138 GHKAIYLPSFSITLLRSAWLPPTYARFGVPLWFNKLDLRDYLQHVYDVKVHGV 296 G K ++LPSF+I L RSA L P YA F VPLWF+KLDLRDYL H Y+V+ H + Sbjct: 15 GLKEVHLPSFTINLRRSAKLSPKYALFEVPLWFSKLDLRDYLYHGYNVRTHSI 67
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Match: A0A8H4N437_9PEZI (Lipase GDSL n=1 Tax=Botryosphaeria dothidea TaxID=55169 RepID=A0A8H4N437_9PEZI) HSP 1 Score: 72.4 bits (176), Expect = 7.900e-14 Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 138 GHKAIYLPSFSITLLRSAWLPPTYARFGVPLWFNKLDLRDYLQHVYDVKVHGV 296 G K +YLP F++TLLR+ +LPPT+A+F VPL NKLDLRDYL H Y +K V Sbjct: 12 GKKPVYLPDFTLTLLRTPFLPPTFAKFLVPLHLNKLDLRDYLWHAYGIKCTNV 64
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Match: A0A5N5DHL2_9PEZI (54S ribosomal protein L41 n=1 Tax=Lasiodiplodia theobromae TaxID=45133 RepID=A0A5N5DHL2_9PEZI) HSP 1 Score: 72.0 bits (175), Expect = 1.160e-13 Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 138 GHKAIYLPSFSITLLRSAWLPPTYARFGVPLWFNKLDLRDYLQHVYDVKVHGV 296 G K +YLP F++TLLR+ +LPPT+A+F VPL NKLD+RDYL H Y VK + Sbjct: 12 GQKPVYLPDFTLTLLRTPFLPPTFAKFIVPLHLNKLDMRDYLWHAYGVKCANI 64
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Match: A0A5J5EZJ3_9PEZI (Ribosomal protein L23-domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5EZJ3_9PEZI) HSP 1 Score: 71.6 bits (174), Expect = 1.420e-13 Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 3 Query: 138 GHKAIYLPSFSITLLRSAWLPPTYARFGVPLWFNKLDLRDYLQHVYDVKVHGV 296 G K ++LP F+I+LLR+ LPP +A+F VPL NKLDLRDYL+H YDV+V V Sbjct: 5 GSKPVFLPKFTISLLRTPHLPPNFAQFAVPLNINKLDLRDYLKHAYDVEVLSV 57
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Match: K2S2T4_MACPH (Lipase GDSL n=1 Tax=Macrophomina phaseolina (strain MS6) TaxID=1126212 RepID=K2S2T4_MACPH) HSP 1 Score: 71.6 bits (174), Expect = 1.600e-13 Identity = 31/53 (58.49%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 138 GHKAIYLPSFSITLLRSAWLPPTYARFGVPLWFNKLDLRDYLQHVYDVKVHGV 296 G K +YLP F++TLLR+ +LPPT+A+F VPL NKLD+RDYL H Y +K V Sbjct: 12 GKKPVYLPDFTLTLLRTPFLPPTFAKFLVPLHLNKLDMRDYLWHAYGIKCTNV 64
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Match: A0A165H863_XYLHT (Uncharacterized protein n=1 Tax=Xylona heveae (strain CBS 132557 / TC161) TaxID=1328760 RepID=A0A165H863_XYLHT) HSP 1 Score: 71.6 bits (174), Expect = 2.540e-13 Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 3 Query: 108 PTMSNFRWKPGHKAIYLPSFSITLLRSAWLPPTYARFGVPLWFNKLDLRDYLQHVYDVKVHGV 296 P ++ + G K +YLP+F++TLLR+ +LPP YA F VPL NKLD+RDYL H Y VKV V Sbjct: 6 PALAARHFNLGGKEVYLPNFTLTLLRTPFLPPNYASFIVPLNLNKLDIRDYLFHAYGVKVVSV 68
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Match: A0A8A3PHC2_9HELO (Uncharacterized protein n=1 Tax=Monilinia vaccinii-corymbosi TaxID=61207 RepID=A0A8A3PHC2_9HELO) HSP 1 Score: 70.5 bits (171), Expect = 7.410e-13 Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 3 Query: 132 KPGHKAIYLPSFSITLLRSAWLPPTYARFGVPLWFNKLDLRDYLQHVYDVKVHGV 296 K G K IYLP+F+ITLLR+ LPP++A F VPL NKLDLRDYL + Y ++V GV Sbjct: 13 KMGRKQIYLPNFTITLLRTPNLPPSFASFIVPLNLNKLDLRDYLWNAYGIEVRGV 67 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97.23768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97.23768.1 >prot_P-canaliculata_contig97.23768.1 ID=prot_P-canaliculata_contig97.23768.1|Name=mRNA_P-canaliculata_contig97.23768.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=99bp SDHPYILQTHGHPIRPPLLSKTHESNRETDRDVPPPQPCPTSAGNLDTRPback to top mRNA from alignment at P-canaliculata_contig97:42918..43301+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig97.23768.1 ID=mRNA_P-canaliculata_contig97.23768.1|Name=mRNA_P-canaliculata_contig97.23768.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=384bp|location=Sequence derived from alignment at P-canaliculata_contig97:42918..43301+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig97:42918..43301+ >mRNA_P-canaliculata_contig97.23768.1 ID=mRNA_P-canaliculata_contig97.23768.1|Name=mRNA_P-canaliculata_contig97.23768.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at P-canaliculata_contig97:42918..43301+ (Pelvetia canaliculata dioecious)back to top |