mRNA_P-canaliculata_contig97.23762.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Match: A0A6A6PT33_9PEZI (CTLH/CRA C-terminal to lish motif domain-containing protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PT33_9PEZI) HSP 1 Score: 315 bits (808), Expect = 3.760e-104 Identity = 168/237 (70.89%), Postives = 197/237 (83.12%), Query Frame = 2 Query: 269 TMSSSPSFAAKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPADIDGIRERVRIRNAIHQGDVQAAIGLLNEVDAQILDSDSLLHFSLLQLQLIEIIRTILNRN-AERSVGAMDFLPAIQFATEQISPRAPTDPQYQSALEHTMALMIFPEDKMAPEFRKLLDVNLRERVASEVNKAMLLARGERAEAKIRQLVRARAWAERHGRDAKADIPPQIPIGLHVDDEMNED 976 TM +S +F VE+MKPSKSDINW+IMDYLVSEGYPGAAEKFAQET+LC A ++ IRERV+IR AIH G V+ AI L+N+ DA+ILD+DSLLHF LLQLQLIEIIR IL N + +++ A DFLPAIQFATEQ+SPRAPTD YQ ALE+TMALMIF +KM EFR+LLDV LRE+VA++VNKA+L ARGERAEAKI+QL+RARAWAE R+AKAD+P IPIGL V DEMN D Sbjct: 15 TMRASGNFDKSVEEMKPSKSDINWLIMDYLVSEGYPGAAEKFAQETNLCPAATVETIRERVKIRTAIHAGKVEEAIELINDADAEILDNDSLLHFQLLQLQLIEIIRGILANNPSSQNIPAQDFLPAIQFATEQLSPRAPTDVNYQRALENTMALMIFQPEKMPQEFRELLDVRLREKVATDVNKAILSARGERAEAKIKQLIRARAWAEVQAREAKADLPAHIPIGLDVADEMNGD 251
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Match: M2MY93_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2MY93_BAUPA) HSP 1 Score: 306 bits (783), Expect = 2.560e-100 Identity = 163/241 (67.63%), Postives = 193/241 (80.08%), Query Frame = 2 Query: 248 ILSST---ARTMSSSPSFAAKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPADIDGIRERVRIRNAIHQGDVQAAIGLLNEVDAQILDSDSLLHFSLLQLQLIEIIRTILNRNAERSVGAMDFLPAIQFATEQISPRAPTDPQYQSALEHTMALMIFPEDKMAPEFRKLLDVNLRERVASEVNKAMLLARGERAEAKIRQLVRARAWAERHGRDAKADIPPQIPIGLHVDD 961 ILSST A TM S SF KVE+MKPSKSDINWVIMDYLVSEGYPGAAEKFAQET++ P D + IRERVRIRNAIH G + AI ++NE+D +ILD++ LLHF LLQL LIEIIR IL+ + + A DFLPAI+FATEQ+SPRAPTDP YQ ALE TMALMIFP +KM PEF++LLDV LRE+VA EVNKA+L +RG+R+EAKIRQL+RARAWAE R AK ++P +P+GL +D Sbjct: 3 ILSSTGPAASTMRGSHSFDRKVEEMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETNMASPVDNESIRERVRIRNAIHGGRIDEAIEMINEIDPEILDTNPLLHFHLLQLHLIEIIRAILSAPSGANPIATDFLPAIKFATEQLSPRAPTDPTYQQALERTMALMIFPPEKMTPEFKELLDVRLREKVAGEVNKAVLESRGQRSEAKIRQLIRARAWAEGEARAAKVELPAFVPVGLDAED 243
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Match: A0A1Z5TK96_HORWE (Uncharacterized protein n=16 Tax=Hortaea werneckii TaxID=91943 RepID=A0A1Z5TK96_HORWE) HSP 1 Score: 302 bits (774), Expect = 6.100e-99 Identity = 163/252 (64.68%), Postives = 197/252 (78.17%), Query Frame = 2 Query: 254 SSTARTMSSSPSFAAKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPADIDGIRERVRIRNAIHQGDVQAAIGLLNEVDAQILDSDSLLHFSLLQLQLIEIIRTILNRNAERSVGAMDFLPAIQFATEQISPRAPTDPQYQSALEHTMALMIFPEDKMAPEFRKLLDVNLRERVASEVNKAMLLARGERAEAKIRQLVRARAWAERHGRDAKADIPPQIPIGLHVDDEMNE-----DVDSMIT 994 S+ + TM + KVE+MKPSKSDINWVIMDYLVSEGYP AAEKFAQET+L P D + IRERVR+R AIH G+V+ AI ++NE+D +ILD++ LLHF LLQLQLIEIIR IL R+ + + DFLPAI+FAT Q+SPRAPTDP YQ ALE TMALMIFP DKMAPEF++LLDV LRE +ASEVNKA+L +RGER+EAKIRQLVRARAWAE R AK D+PP +PIGL ++ + D D+M++ Sbjct: 9 STFSATMRGQQLWDRKVEEMKPSKSDINWVIMDYLVSEGYPAAAEKFAQETNLPGPVDHESIRERVRVRTAIHSGNVKEAIQMVNEIDPEILDTNHLLHFHLLQLQLIEIIRDILTRS-NGNPASTDFLPAIEFATNQLSPRAPTDPVYQQALERTMALMIFPSDKMAPEFKELLDVKLRENIASEVNKAILESRGERSEAKIRQLVRARAWAETEARSAKVDMPPCLPIGLEAEEGAHNGGVPSDGDAMVS 259
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Match: A0A3M6W3A5_HORWE (Uncharacterized protein n=1 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M6W3A5_HORWE) HSP 1 Score: 302 bits (774), Expect = 1.900e-95 Identity = 159/235 (67.66%), Postives = 189/235 (80.43%), Query Frame = 2 Query: 254 SSTARTMSSSPSFAAKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPADIDGIRERVRIRNAIHQGDVQAAIGLLNEVDAQILDSDSLLHFSLLQLQLIEIIRTILNRNAERSVGAMDFLPAIQFATEQISPRAPTDPQYQSALEHTMALMIFPEDKMAPEFRKLLDVNLRERVASEVNKAMLLARGERAEAKIRQLVRARAWAERHGRDAKADIPPQIPIGLHVD 958 S+ + TM + KVE+MKPSKSDINWVIMDYLVSEGYP AAEKFAQET+L P D + IRERVR+R AIH G+V+ AI ++NE+D +ILD++ LLHF LLQLQLIEIIR IL R+ + + DFLPAI+FAT Q+SPRAPTDP YQ ALE TMALMIFP DKMAPEF++LLDV LRE +ASEVNKA+L +RGER+EAKIRQLVRAR WAE R AK D+PP++PIGL + Sbjct: 9 STFSATMRGQQMWDRKVEEMKPSKSDINWVIMDYLVSEGYPAAAEKFAQETNLPGPVDHESIRERVRVRTAIHSGNVKEAIQMVNEIDPEILDTNHLLHFHLLQLQLIEIIRDILTRS-NGNPASTDFLPAIEFATNQLSPRAPTDPVYQQALERTMALMIFPSDKMAPEFKELLDVKLRENIASEVNKAILESRGERSEAKIRQLVRARTWAETEARSAKVDMPPELPIGLEAE 242
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Match: F9XJU4_ZYMTI (Uncharacterized protein n=5 Tax=Zymoseptoria TaxID=1047167 RepID=F9XJU4_ZYMTI) HSP 1 Score: 288 bits (738), Expect = 8.160e-94 Identity = 152/235 (64.68%), Postives = 184/235 (78.30%), Query Frame = 2 Query: 290 FAAKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPADIDGIRERVRIRNAIHQGDVQAAIGLLNEVDAQILDSDSLLHFSLLQLQLIEIIRTILNRNAERSVGAMDFLPAIQFATEQISPRAPTDPQYQSALEHTMALMIFPEDKMAPEFRKLLDVNLRERVASEVNKAMLLARGERAEAKIRQLVRARAWAERHGRDAKADIPPQIPIGLHVDDEMNEDVDSMIT 994 F KVE+MKPSKSDINWVIMDYLVSEGYPGAA KFAQET++ QP D DGIR+RV+IR+AIH G + AI L+NE+D QILD+D +LHF LLQLQLIEIIR+ILN+ + + +F PA++FATEQ+SPRAPTD +YQ ALE TMALMIFP DKM EF+ LLD+ LRE VA VN+A+L ++G+R EAKIRQLVRARAWAE R+AK +P +PIGL + D D M+T Sbjct: 7 FEQKVEEMKPSKSDINWVIMDYLVSEGYPGAAAKFAQETNISQPFDTDGIRDRVQIRSAIHAGKIDEAIDLINELDPQILDTDHILHFDLLQLQLIEIIRSILNKPDGGNPQSSEFRPALEFATEQLSPRAPTDQKYQQALERTMALMIFPPDKMTAEFKVLLDLKLRETVADSVNEAILNSKGQRPEAKIRQLVRARAWAEMQAREAKVQLPETLPIGL----DGPVDGDPMVT 237
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Match: A0A4U0UE40_9PEZI (Uncharacterized protein n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4U0UE40_9PEZI) HSP 1 Score: 300 bits (767), Expect = 1.760e-93 Identity = 160/240 (66.67%), Postives = 190/240 (79.17%), Query Frame = 2 Query: 272 MSSSPSFAAKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPADIDGIRERVRIRNAIHQGDVQAAIGLLNEVDAQILDSDSLLHFSLLQLQLIEIIRTILNRNAERSVGAMDFLPAIQFATEQISPRAPTDPQYQSALEHTMALMIFPEDKMAPEFRKLLDVNLRERVASEVNKAMLLARGERAEAKIRQLVRARAWAERHGRDAKADIPPQIPIGLHVDDEMNEDVDSMI 991 M S + ++VEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQET+L P + + I ERVR+R AIH G ++ AI ++NE D +ILD++ LLHF LLQLQLIEIIR IL + DFLPAI+FAT Q+SPRAPTDP YQ ALE TMALMIFP +KMAPEF++LLDV LRE+VAS+VNKA+L +RGE++EAKIRQLVRARAWAE R A+ D+P IPIGL VDD N D D+M+ Sbjct: 1 MRSQNKWDSQVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETNLPGPVENESIWERVRVRTAIHSGKIKEAIQMVNEADPEILDTNHLLHFHLLQLQLIEIIRGILAKPGGNPAST-DFLPAIEFATSQLSPRAPTDPVYQQALERTMALMIFPPEKMAPEFKELLDVRLREKVASDVNKAILESRGEQSEAKIRQLVRARAWAEVEARSARVDMPAHIPIGLDVDDSANGDGDAML 239
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Match: A0A6A6C6V4_9PEZI (Uncharacterized protein n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6C6V4_9PEZI) HSP 1 Score: 285 bits (730), Expect = 1.520e-92 Identity = 145/220 (65.91%), Postives = 181/220 (82.27%), Query Frame = 2 Query: 290 FAAKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPADIDGIRERVRIRNAIHQGDVQAAIGLLNEVDAQILDSDSLLHFSLLQLQLIEIIRTILNRNAERSVGAMDFLPAIQFATEQISPRAPTDPQYQSALEHTMALMIFPEDKMAPEFRKLLDVNLRERVASEVNKAMLLARGERAEAKIRQLVRARAWAERHGRDAKADIPPQIPIGL 949 F KVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQET++C P D+ IR+RV+IR AIH G V A+ ++NE+D +ILD+D LLHF+LLQLQLIEIIR IL++ ++ + +F PA+QFATEQ++PRAPTD +YQ ALE TMALMIFP +KM PEF++LLD+ LRE VA+ VN+A+L +RG+R+EAKIRQLVRARAWAE +AK ++P I +GL Sbjct: 7 FDRKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETNICNPTDMGDIRDRVQIRKAIHDGKVDEAVEMINELDPEILDTDHLLHFNLLQLQLIEIIRGILDKPG--TIQSSEFRPALQFATEQLAPRAPTDQKYQQALERTMALMIFPPEKMTPEFKELLDLKLRETVANSVNRAILESRGQRSEAKIRQLVRARAWAEDQANEAKIELPNHIAVGL 224
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Match: A0A2I0RTV0_9PEZI (Glucose-induced degradation protein 8-like protein n=6 Tax=Cercospora TaxID=29002 RepID=A0A2I0RTV0_9PEZI) HSP 1 Score: 286 bits (731), Expect = 1.550e-92 Identity = 155/246 (63.01%), Postives = 189/246 (76.83%), Query Frame = 2 Query: 257 STARTMSSSPSFAAKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPADIDGIRERVRIRNAIHQGDVQAAIGLLNEVDAQILDSDSLLHFSLLQLQLIEIIRTILNRNAERSVGAMD-FLPAIQFATEQISPRAPTDPQYQSALEHTMALMIFPEDKMAPEFRKLLDVNLRERVASEVNKAMLLARGERAEAKIRQLVRARAWAERHGRDAKADIPPQIPIGLHVDDEMNEDVDSMI 991 S TM + SF AKVE+ KPSKSDINWVIMDYLVSEGYP AAEKFAQET+L P D++ IRERV +RNAIH G V+ AI L+NE+D QILD + LLHF+LLQLQLIE+IR I+ R A+ D F PA+ FATEQ++P+APTD +YQ AL+ TMALMIFP DKM EF++LLD+ LRE+VA+ VNKA+L +RG+R+EAKIR+LVR RAWAE R+AKAD+P IPIGL D D+M+ Sbjct: 6 SAPSTMRPAHSFDAKVEEKKPSKSDINWVIMDYLVSEGYPAAAEKFAQETNLGNPEDMESIRERVAVRNAIHAGRVEEAIELINEIDHQILDQNQLLHFNLLQLQLIELIRGIIIRPADGPQPTSDDFRPALDFATEQLAPKAPTDAKYQEALQRTMALMIFPPDKMQQEFKELLDLRLREKVATSVNKAILESRGQRSEAKIRKLVRGRAWAEALAREAKADLPATIPIGLDGPDTAPTAGDAMV 251
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Match: N1QFW1_SPHMS (Uncharacterized protein n=1 Tax=Sphaerulina musiva (strain SO2202) TaxID=692275 RepID=N1QFW1_SPHMS) HSP 1 Score: 284 bits (727), Expect = 4.470e-92 Identity = 148/236 (62.71%), Postives = 188/236 (79.66%), Query Frame = 2 Query: 287 SFAAKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPADIDGIRERVRIRNAIHQGDVQAAIGLLNEVDAQILDSDSLLHFSLLQLQLIEIIRTILNRNAERSVGAMD-FLPAIQFATEQISPRAPTDPQYQSALEHTMALMIFPEDKMAPEFRKLLDVNLRERVASEVNKAMLLARGERAEAKIRQLVRARAWAERHGRDAKADIPPQIPIGLHVDDEMNEDVDSMI 991 SF AKV++ KPSKSDINWVIMDYLVSEGYP AAEKFAQET+L P D++ IRERV +R+A+H G V+ AI L+NE+D QILD D LLHF+LLQLQLIE+IR+I+ R + A D F PA++FATEQ++P+APT+ +YQ AL+ TMALMIF +KM PEF++LLD+ LRERVA+ VNKA+L +RG+R+EAKIR+LVR RAWAE R++KA+IP IPIGL D + D+M+ Sbjct: 6 SFDAKVDEKKPSKSDINWVIMDYLVSEGYPAAAEKFAQETNLGSPDDLESIRERVAVRDALHSGKVEEAIALINEIDHQILDQDQLLHFNLLQLQLIELIRSIIIRPTNSTTPASDEFRPALEFATEQLAPKAPTEAKYQEALQRTMALMIFSPEKMQPEFKELLDLRLRERVATSVNKAILQSRGQRSEAKIRKLVRGRAWAENLARESKAEIPLSIPIGLDGADTVQVTGDAMV 241
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Match: A0A4U0UD04_9PEZI (Uncharacterized protein n=1 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4U0UD04_9PEZI) HSP 1 Score: 285 bits (728), Expect = 6.600e-92 Identity = 150/225 (66.67%), Postives = 182/225 (80.89%), Query Frame = 2 Query: 323 KSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPADIDGIRERVRIRNAIHQGDVQAAIGLLNEVDAQILDSDSLLHFSLLQLQLIEIIRTILNRNAERSVGAMDFLPAIQFATEQISPRAPTDPQYQSALEHTMALMIFPEDKMAPEFRKLLDVNLRERVASEVNKAMLLARGERAEAKIRQLVRARAWAERHGRDAKADIPPQIPIGLHVDDEMNE-DVDSMIT 994 KSDINWVIMDYLVSEGYPGAAEKFAQET+L P D + IRERVR+RNAIH G + AI L+NE+D +ILD++ LLHF LLQLQLIEIIRT+L + S A DFLPAI+FATEQ+SPRAPTDP+YQ ALE TMALMIFP +KM PEF++LLD LR +VA EVN+A+L +RGER+EAKIRQL++ARAWAE+ R AK D+P +P+GL DE+ D D+M++ Sbjct: 41 KSDINWVIMDYLVSEGYPGAAEKFAQETNLPGPVDNESIRERVRVRNAIHGGRLDEAIELINEIDPEILDNNHLLHFHLLQLQLIEIIRTVLAKPGS-SPAATDFLPAIKFATEQLSPRAPTDPKYQQALERTMALMIFPPEKMTPEFKELLDEELRRKVAVEVNRAILESRGERSEAKIRQLIKARAWAEQEARAAKVDLPAYVPLGLDAADEVGGVDGDAMVS 264 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97.23762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97.23762.1 >prot_P-canaliculata_contig97.23762.1 ID=prot_P-canaliculata_contig97.23762.1|Name=mRNA_P-canaliculata_contig97.23762.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=242bp MSSSPSFAAKVEDMKPSKSDINWVIMDYLVSEGYPGAAEKFAQETDLCQPback to top mRNA from alignment at P-canaliculata_contig97:29838..31366+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig97.23762.1 ID=mRNA_P-canaliculata_contig97.23762.1|Name=mRNA_P-canaliculata_contig97.23762.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1529bp|location=Sequence derived from alignment at P-canaliculata_contig97:29838..31366+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig97:29838..31366+ >mRNA_P-canaliculata_contig97.23762.1 ID=mRNA_P-canaliculata_contig97.23762.1|Name=mRNA_P-canaliculata_contig97.23762.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1452bp|location=Sequence derived from alignment at P-canaliculata_contig97:29838..31366+ (Pelvetia canaliculata dioecious)back to top |