mRNA_P-canaliculata_contig97.23753.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig97.23753.1
Unique NamemRNA_P-canaliculata_contig97.23753.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
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BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Match: A0A6H0XXJ3_9PEZI (Uncharacterized protein n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XXJ3_9PEZI)

HSP 1 Score: 340 bits (872), Expect = 5.900e-114
Identity = 172/214 (80.37%), Postives = 189/214 (88.32%), Query Frame = 1 
Query:  256 MSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCTIDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPTFQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIETSAKSRVHVDDAFEDIVREIRRFNKDMSGYPGTANGRNGAT-NQMDVDEGEN-TGCCGSGKCTVM 891
            M+S+F+REYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQC IDDE+ALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITS+QSFEEI TFQQQILRVKD+DYFPII+VGNKCDLE ERQVST EGQ+LA+ F CKFIETSAKSR++VD+AF DIVREIR++N+DMS YPG      G   NQ  +D+GE   GCC   KCTVM
Sbjct:    1 MASKFLREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSQQSFEEIKTFQQQILRVKDKDYFPIIVVGNKCDLESERQVSTEEGQKLANDFNCKFIETSAKSRINVDNAFYDIVREIRKYNRDMSSYPGNGAANGGKPGNQFGIDDGEKEAGCC---KCTVM 211
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BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Match: A0A6A6P730_9PEZI (Ras small monomeric GTPase rasa n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6P730_9PEZI)

HSP 1 Score: 340 bits (872), Expect = 6.330e-114
Identity = 174/215 (80.93%), Postives = 191/215 (88.84%), Query Frame = 1 
Query:  256 MSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCTIDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPTFQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIETSAKSRVHVDDAFEDIVREIRRFNKDMSGYPG--TANGRNGATNQMDVDEG-ENTGCCGSGKCTVM 891
            M+++F+REYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQC IDDE+ALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEI TFQQQILRVKDRDYFPII+VGNKCDLE ERQVST EGQ LA +FGCKFIETSAKSR++VD+AF DIVREIRR+NK+M  +PG   A G  GA  +MD+D+  E +GCCG   C VM
Sbjct:    1 MATKFLREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDRDYFPIIVVGNKCDLESERQVSTQEGQNLARQFGCKFIETSAKSRINVDNAFYDIVREIRRYNKEMQTHPGGAPAPGTRGAQEKMDMDDDRERSGCCGG--CVVM 213
[Close]
BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Match: A0A4V5N796_9PEZI (Ras-like protein n=11 Tax=Teratosphaeriaceae TaxID=668547 RepID=A0A4V5N796_9PEZI)

HSP 1 Score: 338 bits (868), Expect = 2.470e-113
Identity = 171/214 (79.91%), Postives = 194/214 (90.65%), Query Frame = 1 
Query:  256 MSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCTIDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPTFQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIETSAKSRVHVDDAFEDIVREIRRFNKDMSGYPGTANGR-NGATNQMDVD-EGENTGCCGSGKCTVM 891
            M S+F+REYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQC IDDE+ALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEE+ TFQQQILRVKD+DYFPII+VGNKCDLE ERQVST EG++LA  FGCKFIETSAKSR++VD+AF DIVREIR++NKDMSGYPG +  + NG  ++M++D   +++GCC  G+C VM
Sbjct:    1 MLSQFLREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEMVTFQQQILRVKDKDYFPIIVVGNKCDLEGERQVSTEEGKQLARGFGCKFIETSAKSRINVDNAFYDIVREIRKYNKDMSGYPGGSGSKSNGPHDKMEMDGHDQDSGCC--GRCAVM 212
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BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Match: A0A6A6HN77_9PEZI (Ras-domain-containing protein n=1 Tax=Viridothelium virens TaxID=1048519 RepID=A0A6A6HN77_9PEZI)

HSP 1 Score: 338 bits (868), Expect = 2.470e-113
Identity = 171/214 (79.91%), Postives = 190/214 (88.79%), Query Frame = 1 
Query:  256 MSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCTIDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPTFQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIETSAKSRVHVDDAFEDIVREIRRFNKDMSGYPGTANGRNGATNQMDVD--EGENTGCCGSGKCTVM 891
            M+S+F+REYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQC IDDE+ALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEI TFQQQILRVKD+DYFPII+VGNKCDLE ERQVST EGQ+LA  FGCKFIETSAKSR++VD+AF DIVREIRR+N++M+   G  N +NG TN M +D  +   +GCC  G+C VM
Sbjct:    1 MASKFLREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIQTFQQQILRVKDKDYFPIIVVGNKCDLESERQVSTQEGQQLARNFGCKFIETSAKSRINVDNAFYDIVREIRRYNREMANPGGPVNYQNGPTNPMGMDGEKESGSGCC--GRCVVM 212
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BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Match: M2LC99_BAUPA (Uncharacterized protein n=3 Tax=Mycosphaerellales TaxID=2726947 RepID=M2LC99_BAUPA)

HSP 1 Score: 338 bits (868), Expect = 2.650e-113
Identity = 173/217 (79.72%), Postives = 194/217 (89.40%), Query Frame = 1 
Query:  256 MSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFV---DEYDPTIEDSYRKQCTIDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPTFQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIETSAKSRVHVDDAFEDIVREIRRFNKDMSGYP-GTANGRNGATNQMDVD-EGENTGCCGSGKCTVM 891
            M+S+F+REYKLVVVGGGGVGKSCLTIQLIQSHFV   DEYDPTIEDSYRKQC IDDE+ALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEI TFQQQILRVKD+DYFPII+VGNKCDLEHERQVST EG+ LA  FGCKFIETSAKSR++VD+AF DIVREIR++NKDMSGYP G+   + G  ++M++D + ++ GCC   KCTVM
Sbjct:    1 MASKFLREYKLVVVGGGGVGKSCLTIQLIQSHFVALQDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEISTFQQQILRVKDKDYFPIIVVGNKCDLEHERQVSTEEGKALARSFGCKFIETSAKSRINVDNAFYDIVREIRKYNKDMSGYPSGSTQAKGGPHDKMEMDGQEQDAGCC---KCTVM 214
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BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Match: A0A6G1LGC1_9PEZI (Ras-like protein n=4 Tax=Dothideomycetidae TaxID=451867 RepID=A0A6G1LGC1_9PEZI)

HSP 1 Score: 338 bits (867), Expect = 3.500e-113
Identity = 171/214 (79.91%), Postives = 194/214 (90.65%), Query Frame = 1 
Query:  256 MSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCTIDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPTFQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIETSAKSRVHVDDAFEDIVREIRRFNKDMSGYPGTANGR-NGATNQMDVDEGEN-TGCCGSGKCTVM 891
            M+S+F+REYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQC ID+E+ALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEI TFQQQILRVKD+DYFPII+VGNKCDLE+ER+VST EG++LA  FGCKFIETSAKSR++VD+AF DIVREIR++NKDMSGYPG ++ +  G  ++MD+D  E+  GCC   KC VM
Sbjct:    1 MASKFLREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCVIDEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIVTFQQQILRVKDKDYFPIIVVGNKCDLENEREVSTEEGKQLARSFGCKFIETSAKSRINVDNAFYDIVREIRKYNKDMSGYPGGSSSQAKGPQDKMDMDGQESEAGCC--AKCAVM 212
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BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Match: A0A6A6PT26_9PEZI (Ras family-domain-containing protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PT26_9PEZI)

HSP 1 Score: 340 bits (873), Expect = 6.260e-113
Identity = 174/222 (78.38%), Postives = 195/222 (87.84%), Query Frame = 1 
Query:  229 PVSSPFWTIMSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCTIDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPTFQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIETSAKSRVHVDDAFEDIVREIRRFNKDMSGYPGTANGRNGATN-QMDVDEGENTGCCGSGKCTVM 891
            P + P  + M+S+F+REYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQC IDDE+ALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSI SRQSF+EI TFQQQILRVKD+DYFPII+VGNKCDLE+ERQVST EG+ LA +FGC+FIETSAKSR++VD+AF DIVREIRR+NKDMSGY G AN R      +MD +E ++ GCC  GKC VM
Sbjct:   71 PSARPASSAMASKFLREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSIQSRQSFQEIETFQQQILRVKDKDYFPIIVVGNKCDLENERQVSTEEGKALARKFGCQFIETSAKSRINVDNAFYDIVREIRRYNKDMSGYQGGANPRRSPEKLEMDGEE-KDAGCC--GKCVVM 289
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BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Match: A0A5M8PJB3_9LECA (RAS small monomeric GTPase n=1 Tax=Lasallia pustulata TaxID=136370 RepID=A0A5M8PJB3_9LECA)

HSP 1 Score: 337 bits (863), Expect = 1.470e-112
Identity = 169/214 (78.97%), Postives = 193/214 (90.19%), Query Frame = 1 
Query:  256 MSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCTIDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPTFQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIETSAKSRVHVDDAFEDIVREIRRFNKDMSGYP-GTANGRNGATNQMDVDEGENT-GCCGSGKCTVM 891
            M+S+F+REYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQC IDDE+ALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEI TFQQQILRVKD+DYFPII+VGNKCDL+ ERQV+  EG+ LA +FGCKFIETSAKSR +VD+AF DIVREIRR+NK+MS YP G  +G NG  ++M++  G+++ GCCG G+C +M
Sbjct:    1 MASKFLREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIIVGNKCDLDSERQVTKQEGEALARKFGCKFIETSAKSRTNVDNAFFDIVREIRRYNKEMSSYPSGVPSGSNGPQHKMEMGGGDSSAGCCG-GRCVMM 213
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BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Match: RAS_BOTFU (Ras-like protein n=27 Tax=Helotiales TaxID=5178 RepID=RAS_BOTFU)

HSP 1 Score: 336 bits (862), Expect = 2.010e-112
Identity = 172/210 (81.90%), Postives = 190/210 (90.48%), Query Frame = 1 
Query:  256 MSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCTIDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPTFQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIETSAKSRVHVDDAFEDIVREIRRFNKDMSGYPGTANGRNGATN-----QMDVDEGEN-TGCC 867
            M+S+F+REYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQC ID+E+ALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEI TFQQQILRVKD+DYFPII+VGNKCDLE ERQVS  EGQ+LAD FGCKFIETSAKSR++VD+AF DIVREIRR+NK+M+GY  TA G +GA N     +M+V EGE  +GCC
Sbjct:    1 MASKFLREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCVIDEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLEGERQVSKQEGQQLADDFGCKFIETSAKSRINVDNAFYDIVREIRRYNKEMAGY--TAGGASGANNGGPQGKMEVSEGEKESGCC 208
[Close]
BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Match: F9XIZ8_ZYMTI (Uncharacterized protein n=16 Tax=Mycosphaerellaceae TaxID=93133 RepID=F9XIZ8_ZYMTI)

HSP 1 Score: 336 bits (862), Expect = 2.230e-112
Identity = 170/217 (78.34%), Postives = 191/217 (88.02%), Query Frame = 1 
Query:  256 MSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCTIDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPTFQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIETSAKSRVHVDDAFEDIVREIRRFNKDMSGYP----GTANGRNGATNQMDVDEGEN-TGCCGSGKCTVM 891
            M+S+F+REYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQC IDDE+ALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSR+SF+EI TFQQQILRVKD+DYFPII+VGNKCDLE +R+VST EG++LA+ FGCKFIETSAKSR++VD+AF DIVREIR++NKDMSGYP    G   GRNG  ++M   + E   GCC   KC VM
Sbjct:    1 MASKFLREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRESFDEIVTFQQQILRVKDKDYFPIIVVGNKCDLEADRKVSTEEGRQLAESFGCKFIETSAKSRINVDNAFYDIVREIRKYNKDMSGYPSGAAGGGGGRNGPKDEMGFQDQEGEAGCC--AKCVVM 215
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97.23753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H0XXJ3_9PEZI5.900e-11480.37Uncharacterized protein n=1 Tax=Peltaster fructico... [more]
A0A6A6P730_9PEZI6.330e-11480.93Ras small monomeric GTPase rasa n=1 Tax=Lineolata ... [more]
A0A4V5N796_9PEZI2.470e-11379.91Ras-like protein n=11 Tax=Teratosphaeriaceae TaxID... [more]
A0A6A6HN77_9PEZI2.470e-11379.91Ras-domain-containing protein n=1 Tax=Viridotheliu... [more]
M2LC99_BAUPA2.650e-11379.72Uncharacterized protein n=3 Tax=Mycosphaerellales ... [more]
A0A6G1LGC1_9PEZI3.500e-11379.91Ras-like protein n=4 Tax=Dothideomycetidae TaxID=4... [more]
A0A6A6PT26_9PEZI6.260e-11378.38Ras family-domain-containing protein n=1 Tax=Neoho... [more]
A0A5M8PJB3_9LECA1.470e-11278.97RAS small monomeric GTPase n=1 Tax=Lasallia pustul... [more]
RAS_BOTFU2.010e-11281.90Ras-like protein n=27 Tax=Helotiales TaxID=5178 Re... [more]
F9XIZ8_ZYMTI2.230e-11278.34Uncharacterized protein n=16 Tax=Mycosphaerellacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97contigP-canaliculata_contig97:9089..10583 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score344.4
Seed ortholog evalue3.9e-92
Seed eggNOG ortholog83344.XP_007930600.1
Preferred nameRAS1
KEGG koko:K07827
KEGG Pathwayko01521,ko01522,ko04010,ko04012,ko04013,ko04014,ko04015,ko04062,ko04068,ko04071,ko04072,ko04137,ko04138,ko04140,ko04150,ko04151,ko04210,ko04211,ko04213,ko04214,ko04218,ko04320,ko04360,ko04370,ko04371,ko04540,ko04550,ko04650,ko04660,ko04662,ko04664,ko04714,ko04720,ko04722,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04933,ko04960,ko05034,ko05160,ko05161,ko05165,ko05166,ko05167,ko05200,ko05203,ko05205,ko05206,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map04010,map04012,map04013,map04014,map04015,map04062,map04068,map04071,map04072,map04137,map04138,map04140,map04150,map04151,map04210,map04211,map04213,map04214,map04218,map04320,map04360,map04370,map04371,map04540,map04550,map04650,map04660,map04662,map04664,map04714,map04720,map04722,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04933,map04960,map05034,map05160,map05161,map05165,map05166,map05167,map05200,map05203,map05205,map05206,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
GOsGO:0000003,GO:0000165,GO:0000166,GO:0000409,GO:0000411,GO:0000746,GO:0000747,GO:0000749,GO:0000750,GO:0000753,GO:0000767,GO:0000902,GO:0000935,GO:0001302,GO:0001558,GO:0001882,GO:0001883,GO:0001884,GO:0002134,GO:0002135,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005856,GO:0005886,GO:0005937,GO:0005938,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006914,GO:0007049,GO:0007154,GO:0007163,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0007190,GO:0007264,GO:0007265,GO:0007266,GO:0007568,GO:0007569,GO:0007584,GO:0008104,GO:0008150,GO:0008152,GO:0008360,GO:0009056,GO:0009605,GO:0009653,GO:0009847,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010514,GO:0010556,GO:0010557,GO:0010564,GO:0010570,GO:0010604,GO:0010628,GO:0012505,GO:0015629,GO:0016020,GO:0016043,GO:0016236,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019103,GO:0019219,GO:0019222,GO:0019236,GO:0019538,GO:0019932,GO:0019933,GO:0019935,GO:0019953,GO:0019954,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0022604,GO:0023014,GO:0023052,GO:0030154,GO:0030307,GO:0030427,GO:0030428,GO:0030435,GO:0030436,GO:0030437,GO:0031136,GO:0031137,GO:0031139,GO:0031279,GO:0031281,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031984,GO:0032005,GO:0032153,GO:0032155,GO:0032258,GO:0032488,GO:0032502,GO:0032505,GO:0032549,GO:0032550,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032561,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033036,GO:0033365,GO:0034293,GO:0034305,GO:0034306,GO:0034307,GO:0034613,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0040008,GO:0042173,GO:0042175,GO:0042221,GO:0042995,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043332,GO:0043412,GO:0043900,GO:0043902,GO:0043934,GO:0043935,GO:0043937,GO:0043940,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044432,GO:0044444,GO:0044446,GO:0044448,GO:0044463,GO:0044464,GO:0044703,GO:0044764,GO:0045595,GO:0045761,GO:0045762,GO:0045893,GO:0045927,GO:0045935,GO:0045990,GO:0045991,GO:0046999,GO:0048315,GO:0048468,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051285,GO:0051286,GO:0051321,GO:0051339,GO:0051349,GO:0051445,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0060255,GO:0060284,GO:0060341,GO:0061794,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070784,GO:0070786,GO:0070887,GO:0071310,GO:0071444,GO:0071496,GO:0071507,GO:0071521,GO:0071704,GO:0071840,GO:0071944,GO:0071963,GO:0072657,GO:0072659,GO:0072665,GO:0075306,GO:0080090,GO:0090033,GO:0090726,GO:0097159,GO:0097271,GO:0097367,GO:0098827,GO:0099568,GO:0099738,GO:0120025,GO:0120038,GO:1900180,GO:1900182,GO:1900428,GO:1900430,GO:1901265,GO:1901363,GO:1901564,GO:1902680,GO:1903046,GO:1903506,GO:1903508,GO:1903664,GO:1903827,GO:1903829,GO:1905708,GO:1990778,GO:1990819,GO:2000112,GO:2000220,GO:2000222,GO:2000241,GO:2000243,GO:2001141
EggNOG free text desc.Ras subfamily of RAS small GTPases
EggNOG OGs1ZZXE@147541,38C7W@33154,3MI8H@451867,3NUEZ@4751,3QQ90@4890,COG1100@1,KOG0395@2759
COG Functional cat.S
Best tax levelDothideomycetidae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131
Hectar predicted targeting categoryother localisation
Exons4
Model size1189
Cds size639
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97.23753.1prot_P-canaliculata_contig97.23753.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig97 9344..10288 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817331.6034238-UTR-P-canaliculata_contig97:9088..93431622817331.6034238-UTR-P-canaliculata_contig97:9088..9343Pelvetia canaliculata dioeciousUTRP-canaliculata_contig97 9089..9343 +
1693495228.820629-UTR-P-canaliculata_contig97:9088..93431693495228.820629-UTR-P-canaliculata_contig97:9088..9343Pelvetia canaliculata dioeciousUTRP-canaliculata_contig97 9089..9343 +
1622817331.6672478-UTR-P-canaliculata_contig97:10288..105831622817331.6672478-UTR-P-canaliculata_contig97:10288..10583Pelvetia canaliculata dioeciousUTRP-canaliculata_contig97 10289..10583 +
1693495228.8969965-UTR-P-canaliculata_contig97:10288..105831693495228.8969965-UTR-P-canaliculata_contig97:10288..10583Pelvetia canaliculata dioeciousUTRP-canaliculata_contig97 10289..10583 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817331.6178443-CDS-P-canaliculata_contig97:9343..93551622817331.6178443-CDS-P-canaliculata_contig97:9343..9355Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97 9344..9355 +
1693495228.835978-CDS-P-canaliculata_contig97:9343..93551693495228.835978-CDS-P-canaliculata_contig97:9343..9355Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97 9344..9355 +
1622817331.6312876-CDS-P-canaliculata_contig97:9482..95971622817331.6312876-CDS-P-canaliculata_contig97:9482..9597Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97 9483..9597 +
1693495228.8470178-CDS-P-canaliculata_contig97:9482..95971693495228.8470178-CDS-P-canaliculata_contig97:9482..9597Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97 9483..9597 +
1622817331.642661-CDS-P-canaliculata_contig97:9700..99761622817331.642661-CDS-P-canaliculata_contig97:9700..9976Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97 9701..9976 +
1693495228.858218-CDS-P-canaliculata_contig97:9700..99761693495228.858218-CDS-P-canaliculata_contig97:9700..9976Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97 9701..9976 +
1622817331.654601-CDS-P-canaliculata_contig97:10052..102881622817331.654601-CDS-P-canaliculata_contig97:10052..10288Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97 10053..10288 +
1693495228.882822-CDS-P-canaliculata_contig97:10052..102881693495228.882822-CDS-P-canaliculata_contig97:10052..10288Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97 10053..10288 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig97.23753.1

>prot_P-canaliculata_contig97.23753.1 ID=prot_P-canaliculata_contig97.23753.1|Name=mRNA_P-canaliculata_contig97.23753.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=213bp
MSSRFMREYKLVVVGGGGVGKSCLTIQLIQSHFVDEYDPTIEDSYRKQCT
IDDELALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIPT
FQQQILRVKDRDYFPIILVGNKCDLEHERQVSTAEGQRLADRFGCKFIET
SAKSRVHVDDAFEDIVREIRRFNKDMSGYPGTANGRNGATNQMDVDEGEN
TGCCGSGKCTVM*
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mRNA from alignment at P-canaliculata_contig97:9089..10583+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig97.23753.1 ID=mRNA_P-canaliculata_contig97.23753.1|Name=mRNA_P-canaliculata_contig97.23753.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1495bp|location=Sequence derived from alignment at P-canaliculata_contig97:9089..10583+ (Pelvetia canaliculata dioecious)
CCCTCTGGTCGAACATTTTCTCCCCACGATAAATTGCATAGTCTCCCTAT
CGGTAGACCTGGAAACTCCCCTCGCTTTCCATCACATCTCTCTCGGTCCG
ATCACCACCGCTCAGCCACAAACAACGGACCGCCCGCCGCCGCCGCCGTC
TACTCCGTAGATTGCCGCATCATTGCTCTCCGCGCATCACAACATTGAGA
GCTCCACCGCAACGCGTCCACGTCGCGTCCAGTCTCTTCTCCATTCTGGA
CTATCATGTCTTCCAGAGTGCGTTGGTCCCGCCTGTCCCGATCGCCATTG
CGCGCGTCATCCCCCTGCCGTCGCCTCTCTCACGCGCGCGACGCGCACAT
GCGCTCGGTCCGGGGCATTGCGCCATGGCTGACCCCTTTCGCAGTTCATG
CGGGAGTACAAACTCGTCGTGGTGGGCGGCGGAGGTGTGGGCAAGAGTTG
CCTTACAATTCAACTCATCCAGAGCCACTTTGTCGACGAATACGATCCCA
CCATTGAAGGTCCGTCTCCCCTCGGCCTCCCATGCGACCGATCGCACGGC
CTGTCCACCCCTCTCGCACATCTTGCCACTGCCGTCTCCCGCACCTGACT
CTTCTCTCCTAGACTCCTATCGCAAGCAATGCACCATCGATGACGAGCTC
GCGCTTCTCGACGTCCTCGATACCGCCGGCCAGGAGGAGTACTCGGCCAT
GCGCGAGCAGTACATGCGGACGGGAGAGGGTTTCCTGCTGGTCTACAGCA
TCACATCGCGGCAGTCGTTTGAGGAGATCCCGACGTTCCAACAACAAATA
CTGCGGGTCAAGGACCGAGACTACTTCCCCATCATCCTCGTCGGCAACAA
ATGTGATTTGGAGCACGAGCGACAAGTCAGCACAGCAGGTCAGTCAAGCT
CCCCTCGGGCCGCATCGCTCGTCGACATGGCCGCGATTTGCTGACTCTTT
GAGCGGTGCTACAGAGGGCCAACGCCTGGCGGACCGATTCGGCTGCAAAT
TCATCGAAACATCGGCCAAATCGCGTGTGCACGTCGACGACGCCTTCGAA
GACATTGTGCGTGAGATCAGGAGGTTCAACAAAGACATGTCTGGCTACCC
GGGGACTGCCAATGGCCGCAACGGAGCGACCAACCAAATGGACGTCGACG
AGGGAGAGAATACCGGATGTTGCGGCAGCGGCAAATGCACGGTGATGTGA
TTGGTGCCCAGATGTTGGCTGTTGGGAGACCAGGTCGCCGTGCGAGTATG
CGCTTGTTGCAAGGAATGCGACCGGTTGGACACTACGTGTTCCGCGACAG
TAATGGCGAGGTGCCAAAAGTGTCCAGCCCTTGGAGTCGCACCGTTCCGA
AGCAAAGCGCGATCGTTCCCGGACCATTGTGCGCAACAACAGCAAGTGCG
CAACATCGTTCGTCCCCCGGGTGTGAAGCGTTCTGACCACTGAAGCGCTG
GCTTATCTTTTCATACTCGTTTCTCCACCCCCAATAATTCCAAGC
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Coding sequence (CDS) from alignment at P-canaliculata_contig97:9089..10583+

>mRNA_P-canaliculata_contig97.23753.1 ID=mRNA_P-canaliculata_contig97.23753.1|Name=mRNA_P-canaliculata_contig97.23753.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1278bp|location=Sequence derived from alignment at P-canaliculata_contig97:9089..10583+ (Pelvetia canaliculata dioecious)
ATGTCTTCCAGAATGTCTTCCAGATTCATGCGGGAGTACAAACTCGTCGT
GGTGGGCGGCGGAGGTGTGGGCAAGAGTTGCCTTACAATTCAACTCATCC
AGAGCCACTTTGTCGACGAATACGATCCCACCATTGAAGTTCATGCGGGA
GTACAAACTCGTCGTGGTGGGCGGCGGAGGTGTGGGCAAGAGTTGCCTTA
CAATTCAACTCATCCAGAGCCACTTTGTCGACGAATACGATCCCACCATT
GAAGACTCCTATCGCAAGCAATGCACCATCGATGACGAGCTCGCGCTTCT
CGACGTCCTCGATACCGCCGGCCAGGAGGAGTACTCGGCCATGCGCGAGC
AGTACATGCGGACGGGAGAGGGTTTCCTGCTGGTCTACAGCATCACATCG
CGGCAGTCGTTTGAGGAGATCCCGACGTTCCAACAACAAATACTGCGGGT
CAAGGACCGAGACTACTTCCCCATCATCCTCGTCGGCAACAAATGTGATT
TGGAGCACGAGCGACAAGTCAGCACAGCAGACTCCTATCGCAAGCAATGC
ACCATCGATGACGAGCTCGCGCTTCTCGACGTCCTCGATACCGCCGGCCA
GGAGGAGTACTCGGCCATGCGCGAGCAGTACATGCGGACGGGAGAGGGTT
TCCTGCTGGTCTACAGCATCACATCGCGGCAGTCGTTTGAGGAGATCCCG
ACGTTCCAACAACAAATACTGCGGGTCAAGGACCGAGACTACTTCCCCAT
CATCCTCGTCGGCAACAAATGTGATTTGGAGCACGAGCGACAAGTCAGCA
CAGCAGAGGGCCAACGCCTGGCGGACCGATTCGGCTGCAAATTCATCGAA
ACATCGGCCAAATCGCGTGTGCACGTCGACGACGCCTTCGAAGACATTGT
GCGTGAGATCAGGAGGTTCAACAAAGACATGTCTGGCTACCCGGGGACTG
CCAATGGCCGCAACGGAGCGACCAACCAAATGGACGTCGACGAGGGAGAG
AATACCGGATGTTGCGGCAGCGGCAAATGCACGGTGATGTGAAGGGCCAA
CGCCTGGCGGACCGATTCGGCTGCAAATTCATCGAAACATCGGCCAAATC
GCGTGTGCACGTCGACGACGCCTTCGAAGACATTGTGCGTGAGATCAGGA
GGTTCAACAAAGACATGTCTGGCTACCCGGGGACTGCCAATGGCCGCAAC
GGAGCGACCAACCAAATGGACGTCGACGAGGGAGAGAATACCGGATGTTG
CGGCAGCGGCAAATGCACGGTGATGTGA
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