mRNA_P-canaliculata_contig9694.23744.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig9694.23744.1
Unique NamemRNA_P-canaliculata_contig9694.23744.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Match: A0A6G1L297_9PEZI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1L297_9PEZI)

HSP 1 Score: 407 bits (1046), Expect = 7.470e-141
Identity = 202/279 (72.40%), Postives = 221/279 (79.21%), Query Frame = 1
Query:   79 DSADYTTTNPNDADATPNGATDPQPNPASS-FKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWGPERWQDWSIGTPRVGLRPGQPAAEYGQDKGHEGTEAGAVDVVITCEERCWDAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAAVEERS----IAPDTNGFDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCW 900
            D AD   T+      T NG+T    + A   FKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPS+ QPNVY FN+TSY++MY+EL+ KD RLYRANGILPMLERNK VKWGPERWQDW +G PRVG R       Y  DKG++GTEAG VD+VITCEERCWDAVVDDLLTRG  LNRPVHVFNVDIKDNHEEALVGG+AIL+LAD LN+AA EER        + NGFD G  GAR GFDERVPDILA WQ+ WP LPALW+L W
Sbjct:    7 DGADPPPTSAPTDTTTVNGSTSQSESSAEGGFKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSINQPNVYNFNNTSYESMYEELRGKDERLYRANGILPMLERNKGVKWGPERWQDWRVGVPRVGKR-------YKTDKGYDGTEAGTVDIVITCEERCWDAVVDDLLTRGSPLNRPVHVFNVDIKDNHEEALVGGKAILELADALNQAAREERDRHVQAGGEANGFDAGQAGARLGFDERVPDILASWQEMWPTLPALWTLAW 278          
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Match: A0A1V8TUR0_9PEZI (Protein-serine/threonine phosphatase n=4 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8TUR0_9PEZI)

HSP 1 Score: 405 bits (1042), Expect = 9.070e-140
Identity = 197/258 (76.36%), Postives = 211/258 (81.78%), Query Frame = 1
Query:  145 PQPNPASSFKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWGPERWQDWSIGTPRVGLRP-GQPAAEYGQDKGHEGTEAGAVDVVITCEERCWDAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAAVEERSIAPDTNG-----FDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCW 900
            PQP P   FKLKFCTVCASNNNRSMEAHLRLTTAP+PYPTISFGTGSLVRLPGPS+TQPNVY FNSTSY  MY+EL +KDARLYR NGILPMLERNK VKWGPERWQDW IG PRVG R  G+   E+  DKG +G E G VDVV TCEERCWDAVVDDLL+RG  LNRPVHVFNVDIKDNHEEALVGG+AIL+LAD LN  A EER       G     FD G GGAR GFDERVP++LAEWQ+RWPQLPALW+L W
Sbjct:   52 PQPQPEGGFKLKFCTVCASNNNRSMEAHLRLTTAPNPYPTISFGTGSLVRLPGPSITQPNVYNFNSTSYSAMYEELLSKDARLYRLNGILPMLERNKGVKWGPERWQDWRIGVPRVGKRVWGEGQGEWDSDKGAKGAEGGVVDVVFTCEERCWDAVVDDLLSRGSPLNRPVHVFNVDIKDNHEEALVGGKAILELADALNAVAGEEREAWLSGEGKGSGEFDGGVGGARQGFDERVPEVLAEWQERWPQLPALWTLAW 309          
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Match: A0A6A6CS02_9PEZI (Protein-serine/threonine phosphatase n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CS02_9PEZI)

HSP 1 Score: 403 bits (1036), Expect = 7.410e-139
Identity = 196/256 (76.56%), Postives = 210/256 (82.03%), Query Frame = 1
Query:  169 FKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWGPERWQDWSIGTPRVGLR--------PGQPAAEYGQDKGHEGTEAGAVDVVITCEERCWDAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAAVEERSI----APDTNGFDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCW 900
            FKL+FCTVCASNNNRSMEAHLRLTTAP+PYPTISFGTGSLVRLPGPS++QPNVY FNSTSY  MY EL +KD RLY ANGILPMLERNKNVKWGPERWQDW +G PRVG R         G   AEY  DKG+ GTE+G VDVVITCEERCWDAVVDDLL RG  LNRPVHVFNVDIKDNHEEALVGGRAIL+LAD LN AA EER +        NGF+RGS GAR GFDERVP+IL +WQDRWP LPALW+L W
Sbjct:   54 FKLRFCTVCASNNNRSMEAHLRLTTAPTPYPTISFGTGSLVRLPGPSISQPNVYNFNSTSYAAMYSELLSKDQRLYNANGILPMLERNKNVKWGPERWQDWKVGVPRVGKRWHVQEGTEGGGAEAEYKDDKGYFGTESGTVDVVITCEERCWDAVVDDLLNRGAPLNRPVHVFNVDIKDNHEEALVGGRAILELADALNAAAREERDVWVKGGGAANGFERGSAGARGGFDERVPEILEKWQDRWPNLPALWTLAW 309          
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Match: A0A139I904_9PEZI (Protein-serine/threonine phosphatase n=3 Tax=Pseudocercospora TaxID=131324 RepID=A0A139I904_9PEZI)

HSP 1 Score: 400 bits (1027), Expect = 2.460e-137
Identity = 197/259 (76.06%), Postives = 213/259 (82.24%), Query Frame = 1
Query:  169 FKLKFCTVCASNNNRSMEAHLRLTTAPS-PYPTISFGTGSLVRLPGPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWGPERWQDWSIGTPRVGLRPGQPAA----------EYGQDKGHEGTEAGAVDVVITCEERCWDAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAAVEER----SIAPDTNGFDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCW 900
            +KL+FCTVCASNNNRSMEAHLRLTTAP+ PYPTISFGTGSLVRLPGPS++QPNVY FNSTSY  MYDEL AKD RLY ANGILPMLERNKNVKWGPERWQDW +G PRVG R   P A          EY +D+G++GTEAG VD+VITCEERCWDAVVDDLL+RG  LNRPVHVFNVDIKDNHEEAL+GGRAILDLAD LN AA EER    S     NGFD+GS G R GFDERVPDILA WQ+RWP LPALW+L W
Sbjct:   62 YKLRFCTVCASNNNRSMEAHLRLTTAPTGPYPTISFGTGSLVRLPGPSISQPNVYNFNSTSYANMYDELLAKDKRLYNANGILPMLERNKNVKWGPERWQDWKVGIPRVGKRWVNPQAQQQEGVVAEAEYAEDQGYQGTEAGTVDIVITCEERCWDAVVDDLLSRGSPLNRPVHVFNVDIKDNHEEALIGGRAILDLADALNAAAREEREAYLSSGGSANGFDQGSAG-REGFDERVPDILASWQERWPHLPALWTLAW 319          
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Match: F9WZJ4_ZYMTI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=5 Tax=Zymoseptoria TaxID=1047167 RepID=F9WZJ4_ZYMTI)

HSP 1 Score: 397 bits (1019), Expect = 8.300e-137
Identity = 194/252 (76.98%), Postives = 212/252 (84.13%), Query Frame = 1
Query:  154 NPASSFKLKFCTVCASNNNRSMEAHLRLTTA-PSPYPTISFGTGSLVRLPGPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWGPERWQDWSIGTPRVGLRPGQPAAEYGQDKGHEGTEAGAVDVVITCEERCWDAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAAVEERS--IAPDTNGFDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCW 900
            NP+ SFKLKFCTVCASNNNRSMEAHLRLTTA P+PYPTISFGTGSLVRLPGPS++QPNVY FNSTSY +MYDEL +KD RLY ANGILPMLERNKNVK+GPERWQDW +G PR          E+G DKG +GTEAG VDVVITCEERCWDAVVDDLLTRG  LNRPVHVFNVDIKDNHEEALVGGRAIL+LAD+LN  AVEER   +     GF+ G G  R+GFDERVPD+LAEWQ+RWP LPALW+L W
Sbjct:   34 NPSDSFKLKFCTVCASNNNRSMEAHLRLTTAQPTPYPTISFGTGSLVRLPGPSISQPNVYNFNSTSYASMYDELASKDRRLYSANGILPMLERNKNVKFGPERWQDWRVGVPRT---------EWGDDKGAKGTEAGTVDVVITCEERCWDAVVDDLLTRGSPLNRPVHVFNVDIKDNHEEALVGGRAILELADKLNEVAVEEREAYVKGGGRGFENGEG--RSGFDERVPDVLAEWQERWPNLPALWTLAW 274          
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Match: A0A150V299_9PEZI (Protein-serine/threonine phosphatase n=1 Tax=Acidomyces richmondensis BFW TaxID=766039 RepID=A0A150V299_9PEZI)

HSP 1 Score: 394 bits (1011), Expect = 5.030e-135
Identity = 192/269 (71.38%), Postives = 214/269 (79.55%), Query Frame = 1
Query:  139 TDPQPNPASSFKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWGPERWQDWSIGTPRVGLR-----------PGQPAAEYGQDKGHEGTEAGAVDVVITCEERCWDAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAAVEERSI----APDTNGFDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCW 900
            T P   P  +F+LKFCTVCASNNNRSMEAHLRL+TAP PYPTISFGTG+LVRLPGPSVTQPNVY FNSTSY ++Y+EL AKD RLY+ANGILP+LERNK+VKWGPERWQDW +G PRVG R             +    Y  DKG+EGTEAG VDVV+TCEERCWDAV+DDLL+RG  LNRPVHVFNVDIKDNHEEALVGG+AIL+LAD LN AA EER+         NGFD G  GAR GFDERVP+ILA WQ+RWP LPALW+L W
Sbjct:   43 TQPAAQPLPAFRLKFCTVCASNNNRSMEAHLRLSTAPVPYPTISFGTGTLVRLPGPSVTQPNVYNFNSTSYASIYNELLAKDQRLYKANGILPLLERNKSVKWGPERWQDWRVGVPRVGKRWMNKESTSYKEEDEDQVTYEGDKGYEGTEAGTVDVVVTCEERCWDAVLDDLLSRGAPLNRPVHVFNVDIKDNHEEALVGGKAILELADALNAAANEERAAWERQGGPVNGFDSGHAGARQGFDERVPEILATWQERWPTLPALWTLAW 311          
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Match: M2NKA1_BAUPA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2NKA1_BAUPA)

HSP 1 Score: 392 bits (1006), Expect = 6.840e-135
Identity = 192/249 (77.11%), Postives = 202/249 (81.12%), Query Frame = 1
Query:  169 FKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWGPERWQDWSIGTPRVGLRPGQPAAEYGQDKGHEGTEAGAVDVVITCEERCWDAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAAVEERSI-----APDTNGFDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCW 900
            FKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPS++QPNVY FNSTSY  MY+EL AKD RLYRANGILPMLERNK VKWGPERWQDW +G PR         AEY  DKG+ GTEAG VD+VITCEERCWDAV+DDLLTRG  LNRPVHVFNVDIKDNHEEALVGG+AIL+LAD LN AA EER           NGFD G  GAR GFDERVPDILAEWQ     LPALW+L W
Sbjct:   31 FKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSISQPNVYHFNSTSYAAMYNELAAKDQRLYRANGILPMLERNKGVKWGPERWQDWQVGVPR---------AEYKTDKGYMGTEAGTVDIVITCEERCWDAVIDDLLTRGSPLNRPVHVFNVDIKDNHEEALVGGKAILELADALNGAAAEEREAWGQKTGGGMNGFDSGHAGARAGFDERVPDILAEWQXXXXTLPALWTLAW 270          
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Match: A0A6A7BV07_9PEZI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Piedraia hortae CBS 480.64 TaxID=1314780 RepID=A0A6A7BV07_9PEZI)

HSP 1 Score: 392 bits (1006), Expect = 1.770e-134
Identity = 209/319 (65.52%), Postives = 230/319 (72.10%), Query Frame = 1
Query:    1 MSTDPRRR----PTEPPXXXXXXXXXXPVEDSADYTTTNPNDADATPNGATDPQPNPASSFKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWGPERWQDWSIGTPRVGLR----------PGQPAAEYGQDKGHEGTEAGAVDVVITCEERCWDAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAAVEERSIAPDTNG----FDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCWL 903
            MS DPRRR    PT PP             +S   T    +D   T NG+      P   FKL+F   CASNNNRSMEAHLRLTT+PSPYPTISFGTGSLVRLPGPS++QPNVY FN+TSY +MYDEL AKD RLYR+NGILPMLERN+ VKWGPERWQDW IG PR G R          P     +Y  DKG+EGTEAG VD+VITCEERCWDAVVDDLLTRG  LNRPVHVFNVDIKDNHEEALVGG+AIL+LAD LN AA EER+    TNG    FD G   AR+GFDERVPDILA WQ++WP LPALW+L WL
Sbjct:    1 MSIDPRRRAQVAPTPPPS-----------NESVSQTQVVSHD---TTNGS-----KPEDDFKLRF--FCASNNNRSMEAHLRLTTSPSPYPTISFGTGSLVRLPGPSISQPNVYNFNTTSYASMYDELAAKDLRLYRSNGILPMLERNRGVKWGPERWQDWRIGHPRTGKRWMDAEGVAHAPDAGQVDYSNDKGYEGTEAGVVDIVITCEERCWDAVVDDLLTRGSPLNRPVHVFNVDIKDNHEEALVGGKAILELADRLNAAAAEERAAWIRTNGVPNGFDSGHVLARSGFDERVPDILAAWQEKWPTLPALWTLAWL 298          
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Match: A0A074XEC6_9PEZI (Protein-serine/threonine phosphatase n=27 Tax=Aureobasidium TaxID=5579 RepID=A0A074XEC6_9PEZI)

HSP 1 Score: 381 bits (979), Expect = 3.190e-130
Identity = 183/255 (71.76%), Postives = 207/255 (81.18%), Query Frame = 1
Query:  166 SFKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWGPERWQDWSIGTPRVGLR------PGQPAAEYGQDKGHEGTEAGAVDVVITCEERCWDAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAAVEERSIAPD----TNGFDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCW 900
            SFKL+FCTVCASNNNRSMEAHLRL  +   YPTISFGTGSLVRLPGPS+TQPN+Y FN+TSY +MY EL+ KDARLYRANGILPML+RN+N+KWGPERWQDW IG PRVG R      PG P   Y  D G +GTE+G VD+VITCE+RCW+AVVDDLL+RG  LNRPVHVFNVDIKDNHEE+LVGGRAIL+LADELN AA +ER I  +    T GFD  +GG+R GFD RVP IL EWQ+RWP  PALW+L W
Sbjct:   55 SFKLRFCTVCASNNNRSMEAHLRLAGSAQQYPTISFGTGSLVRLPGPSITQPNIYNFNNTSYDSMYRELEGKDARLYRANGILPMLDRNRNIKWGPERWQDWRIGYPRVGKRYANAPIPGDPV--YTNDMGAQGTESGTVDIVITCEDRCWEAVVDDLLSRGSPLNRPVHVFNVDIKDNHEESLVGGRAILELADELNAAAQDERKIHAEKTGSTEGFDAATGGSRDGFDARVPIILGEWQERWPHHPALWTLAW 307          
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Match: A0A2P8AIU7_9PEZI (Protein-serine/threonine phosphatase n=2 Tax=Elsinoe australis TaxID=40998 RepID=A0A2P8AIU7_9PEZI)

HSP 1 Score: 378 bits (970), Expect = 7.710e-129
Identity = 178/255 (69.80%), Postives = 205/255 (80.39%), Query Frame = 1
Query:  169 FKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLPGPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWGPERWQDWSIGTPRVGLRPGQPA-------AEYGQDKGHEGTEAGAVDVVITCEERCWDAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAAVEERSI----APDTNGFDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCW 900
            +KL+FCTVCASNNNRSMEAHLRL+TA   YP ISFGTGSLVRLPGPS+ +PNVY FN+TSY  MY EL++KD RLY+ANGILPMLERN+ VKWGPERWQDW +G PR+G R   P+        +Y +D GH+GTEAG VD+V TCEERCWDAVVDDLL+RG  LNRPVHVFNVDIKDNHEEALVGG+AIL+LAD LN AA EER          NG+D+ +  AR GFD RVPDILA+WQ+RWP+LPALW+L W
Sbjct:   54 YKLRFCTVCASNNNRSMEAHLRLSTAEQQYPVISFGTGSLVRLPGPSIDKPNVYNFNNTSYDAMYRELESKDPRLYKANGILPMLERNRGVKWGPERWQDWKVGVPRIGKRIVAPSDAQSNVEPDYNKDLGHDGTEAGLVDIVFTCEERCWDAVVDDLLSRGSPLNRPVHVFNVDIKDNHEEALVGGKAILELADALNAAAREERDAWAKGGSGVNGWDKATSSAREGFDARVPDILADWQERWPRLPALWTLAW 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9694.23744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G1L297_9PEZI7.470e-14172.40RNA polymerase II subunit A C-terminal domain phos... [more]
A0A1V8TUR0_9PEZI9.070e-14076.36Protein-serine/threonine phosphatase n=4 Tax=Rachi... [more]
A0A6A6CS02_9PEZI7.410e-13976.56Protein-serine/threonine phosphatase n=1 Tax=Zasmi... [more]
A0A139I904_9PEZI2.460e-13776.06Protein-serine/threonine phosphatase n=3 Tax=Pseud... [more]
F9WZJ4_ZYMTI8.300e-13776.98RNA polymerase II subunit A C-terminal domain phos... [more]
A0A150V299_9PEZI5.030e-13571.38Protein-serine/threonine phosphatase n=1 Tax=Acido... [more]
M2NKA1_BAUPA6.840e-13577.11RNA polymerase II subunit A C-terminal domain phos... [more]
A0A6A7BV07_9PEZI1.770e-13465.52RNA polymerase II subunit A C-terminal domain phos... [more]
A0A074XEC6_9PEZI3.190e-13071.76Protein-serine/threonine phosphatase n=27 Tax=Aure... [more]
A0A2P8AIU7_9PEZI7.710e-12969.80Protein-serine/threonine phosphatase n=2 Tax=Elsin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9694contigP-canaliculata_contig9694:6575..7480 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score403.7
Seed ortholog evalue7.7e-110
Seed eggNOG ortholog83344.XP_007925697.1
Preferred nameSSU72
KEGG koko:K15544
KEGG Pathwayko03015,map03015
GOsGO:0001173,GO:0001174,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005847,GO:0005849,GO:0006139,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006368,GO:0006369,GO:0006378,GO:0006379,GO:0006396,GO:0006397,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0008420,GO:0009058,GO:0009059,GO:0009302,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010564,GO:0010639,GO:0010948,GO:0016070,GO:0016071,GO:0016074,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0023052,GO:0030846,GO:0030847,GO:0031123,GO:0031124,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043244,GO:0043412,GO:0043631,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045786,GO:0045839,GO:0045930,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051252,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0060623,GO:0065007,GO:0070013,GO:0070940,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0097659,GO:0098781,GO:0098787,GO:0098789,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902340,GO:1903379,GO:1903506,GO:1905213,GO:2000112,GO:2001141,GO:2001251
EggNOG free text desc.Ssu72-like protein
EggNOG OGs1ZY3T@147541,38BQE@33154,3MHI7@451867,3NZ1A@4751,3QN3T@4890,COG5211@1,KOG2424@2759
EC3.1.3.16
COG Functional cat.K
Best tax levelDothideomycetidae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019,ko03021
Hectar predicted targeting categoryother localisation
Exons1
Model size906
Cds size906
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817331.0188923-CDS-P-canaliculata_contig9694:6574..74801622817331.0188923-CDS-P-canaliculata_contig9694:6574..7480Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9694 6575..7480 +
1693495228.521897-CDS-P-canaliculata_contig9694:6574..74801693495228.521897-CDS-P-canaliculata_contig9694:6574..7480Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9694 6575..7480 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9694.23744.1prot_P-canaliculata_contig9694.23744.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig9694 6575..7480 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig9694.23744.1

>prot_P-canaliculata_contig9694.23744.1 ID=prot_P-canaliculata_contig9694.23744.1|Name=mRNA_P-canaliculata_contig9694.23744.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=302bp
MSTDPRRRPTEPPPPPPPPPPPEPVEDSADYTTTNPNDADATPNGATDPQ
PNPASSFKLKFCTVCASNNNRSMEAHLRLTTAPSPYPTISFGTGSLVRLP
GPSVTQPNVYTFNSTSYQTMYDELQAKDARLYRANGILPMLERNKNVKWG
PERWQDWSIGTPRVGLRPGQPAAEYGQDKGHEGTEAGAVDVVITCEERCW
DAVVDDLLTRGGALNRPVHVFNVDIKDNHEEALVGGRAILDLADELNRAA
VEERSIAPDTNGFDRGSGGARTGFDERVPDILAEWQDRWPQLPALWSLCW
L*
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mRNA from alignment at P-canaliculata_contig9694:6575..7480+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9694.23744.1 ID=mRNA_P-canaliculata_contig9694.23744.1|Name=mRNA_P-canaliculata_contig9694.23744.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=906bp|location=Sequence derived from alignment at P-canaliculata_contig9694:6575..7480+ (Pelvetia canaliculata dioecious)
ATGTCGACCGATCCACGCCGCCGACCGACCGAACCACCACCACCTCCCCC ACCCCCTCCTCCTCCTGAACCCGTCGAAGACAGCGCGGACTACACCACCA CCAACCCCAACGACGCCGATGCAACACCAAACGGCGCAACCGACCCCCAA CCCAACCCCGCCTCCTCCTTCAAGCTCAAGTTCTGCACCGTCTGCGCCAG CAACAACAACCGCAGCATGGAAGCGCACCTCCGCCTCACCACCGCGCCGT CGCCCTACCCCACCATCTCCTTCGGCACCGGCAGCCTGGTGCGGCTCCCG GGCCCCAGCGTCACCCAGCCCAACGTCTACACCTTCAACAGCACCAGCTA CCAGACCATGTACGACGAGCTGCAGGCCAAGGACGCGCGGCTGTACCGCG CCAATGGCATCCTGCCCATGCTGGAGCGCAACAAGAACGTCAAGTGGGGC CCGGAGCGCTGGCAGGACTGGAGCATTGGGACGCCGCGCGTGGGGCTCCG TCCGGGTCAGCCTGCCGCCGAGTATGGACAGGACAAAGGGCACGAGGGGA CCGAGGCCGGGGCGGTGGACGTCGTCATCACGTGCGAGGAGCGGTGCTGG GATGCGGTGGTGGACGACTTGCTGACGCGGGGCGGCGCTTTGAATCGACC GGTGCACGTGTTCAACGTGGATATCAAGGATAACCACGAGGAGGCGCTGG TTGGGGGTCGCGCCATTCTGGATTTGGCGGATGAGCTGAACCGCGCGGCT GTTGAGGAGAGATCGATTGCACCGGACACCAATGGGTTCGATCGAGGCAG TGGAGGCGCAAGAACGGGGTTCGACGAGAGAGTGCCGGACATACTGGCGG AATGGCAGGACCGGTGGCCACAGCTGCCCGCATTGTGGAGCTTATGCTGG TTATGA
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Coding sequence (CDS) from alignment at P-canaliculata_contig9694:6575..7480+

>mRNA_P-canaliculata_contig9694.23744.1 ID=mRNA_P-canaliculata_contig9694.23744.1|Name=mRNA_P-canaliculata_contig9694.23744.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1812bp|location=Sequence derived from alignment at P-canaliculata_contig9694:6575..7480+ (Pelvetia canaliculata dioecious)
ATGTCGACCGATCCACGCCGCCGACCGACCGAACCACCACCACCTCCCCC
ACCCCCTCCTCCTCCTGAACCCGTCGAAGACAGCGCGGACTACACCACCA
CCAACCCCAACGACGCCGATGCAACACCAAACGGCGCAACCGACCCCCAA
CCCAACCCCGCCTCCTCCTTCAAGCTCAAGTTCTGCACCGTCTGCGCCAG
CAACAACAACCGCAGCATGGAAGCGCACCTCCGCCTCACCACCGCGCCGT
CGCCCTACCCCACCATCTCCTTCGGCACCGGCAGCCTGGTGCGGCTCCCG
GGCCCCAGCGTCACCCAGCCCAACGTCTACACCTTCAACAGCACCAGCTA
CCAGACCATGTACGACGAGCTGCAGGCCAAGGACGCGCGGCTGTACCGCG
CCAATGGCATCCTGCCCATGCTGGAGCGCAACAAGAACGTCAAGTGGGGC
CCGGAGCGCTGGCAGGACTGGAGCATTGGGACGCCGCGCGTGGGGCTCCG
TCCGGGTCAGCCTGCCGCCGAGTATGGACAGGACAAAGGGCACGAGGGGA
CCGAGGCCGGGGCGGTGGACGTCGTCATCACGTGCGAGGAGCGGTGCTGG
GATGCGGTGGTGGACGACTTGCTGACGCGGGGCGGCGCTTTGAATCGACC
GGTGCACGTGTTCAACGTGGATATCAAGGATAACCACGAGGAGGCGCTGG
TTGGGGGTCGCGCCATTCTGGATTTGGCGGATGAGCTGAACCGCGCGGCT
GTTGAGGAGAGATCGATTGCACCGGACACCAATGGGTTCGATCGAGGCAG
TGGAGGCGCAAGAACGGGGTTCGACGAGAGAGTGCCGGACATACTGGCGG
AATGGCAGGACCGGTGGCCACAGCTGCCCGCATTGTGGAGCTTATGCTGG
TTATGAATGTCGACCGATCCACGCCGCCGACCGACCGAACCACCACCACC
TCCCCCACCCCCTCCTCCTCCTGAACCCGTCGAAGACAGCGCGGACTACA
CCACCACCAACCCCAACGACGCCGATGCAACACCAAACGGCGCAACCGAC
CCCCAACCCAACCCCGCCTCCTCCTTCAAGCTCAAGTTCTGCACCGTCTG
CGCCAGCAACAACAACCGCAGCATGGAAGCGCACCTCCGCCTCACCACCG
CGCCGTCGCCCTACCCCACCATCTCCTTCGGCACCGGCAGCCTGGTGCGG
CTCCCGGGCCCCAGCGTCACCCAGCCCAACGTCTACACCTTCAACAGCAC
CAGCTACCAGACCATGTACGACGAGCTGCAGGCCAAGGACGCGCGGCTGT
ACCGCGCCAATGGCATCCTGCCCATGCTGGAGCGCAACAAGAACGTCAAG
TGGGGCCCGGAGCGCTGGCAGGACTGGAGCATTGGGACGCCGCGCGTGGG
GCTCCGTCCGGGTCAGCCTGCCGCCGAGTATGGACAGGACAAAGGGCACG
AGGGGACCGAGGCCGGGGCGGTGGACGTCGTCATCACGTGCGAGGAGCGG
TGCTGGGATGCGGTGGTGGACGACTTGCTGACGCGGGGCGGCGCTTTGAA
TCGACCGGTGCACGTGTTCAACGTGGATATCAAGGATAACCACGAGGAGG
CGCTGGTTGGGGGTCGCGCCATTCTGGATTTGGCGGATGAGCTGAACCGC
GCGGCTGTTGAGGAGAGATCGATTGCACCGGACACCAATGGGTTCGATCG
AGGCAGTGGAGGCGCAAGAACGGGGTTCGACGAGAGAGTGCCGGACATAC
TGGCGGAATGGCAGGACCGGTGGCCACAGCTGCCCGCATTGTGGAGCTTA
TGCTGGTTATGA
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