mRNA_P-canaliculata_contig9539.23565.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI) HSP 1 Score: 370 bits (951), Expect = 1.690e-127 Identity = 187/255 (73.33%), Postives = 207/255 (81.18%), Query Frame = 1
Query: 1 MVWATLMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEVFEEHGNMDQTLIQHEMPVETILEKRGTKDARISTGYERKEKECFTLCLAVMADGKKVPLRMIFKGTPFIPPATPEKGRQTQPRKGSIAAEILPMNRTKFGHPAGGMSFGVQKKSWCDAR*CTLWVSESWKLRPNDGSIIKQRPSILVLDDFKYHREKYFIADLKGMSNTIVIFIPGRLTPLLQPLDRMLNKQMKWVMRGKYTTY 765
M WATLMKLR+ALVERA EIYAR NPPA GESPIKGE L+ QLESVT EVF E GNMDQT +QHEMPVET LEK G KDARI+TG KEKE FTLCLAV D KKVPLR IFKGTP IPP P KG+ TQPRK SIA E+LP NR+K G+P GGMSFGVQ+KSWCD R C LW+ SW LRPN+GS++KQRP ILVLDDFK H++ FIA+LK +NTIVIFIPG LTPLLQPLDRMLNK+MK ++RG YT Y
Sbjct: 1 MAWATLMKLREALVERADEIYARRNPPAPGESPIKGEDLTSEQLESVTAEVFVELGNMDQTPVQHEMPVETSLEKTGAKDARIATGG--KEKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTNY 253
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 356 bits (913), Expect = 1.110e-118 Identity = 183/255 (71.76%), Postives = 204/255 (80.00%), Query Frame = 1
Query: 1 MVWATLMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEVFEEHGNMDQTLIQHEMPVETILEKRGTKDARISTGYERKEKECFTLCLAVMADGKKVPLRMIFKGTPFIPPATPEKGRQTQPRKGSIAAEILPMNRTKFGHPAGGMSFGVQKKSWCDAR*CTLWVSESWKLRPNDGSIIKQRPSILVLDDFKYHREKYFIADLKGMSNTIVIFIPGRLTPLLQPLDRMLNKQMKWVMRGKYTTY 765
M WAT+MKLR+ALV+RAGEIYAR +PPA ESPIKGE L+ QL SV EVFEE GNMDQT +QHE+PVET LEK G KDARISTG KEKE FTL LAVMADGKKV R+IFKGTPF PP KG+ T PRK S+A EI P NR K GHPA GMSFGVQ+KSW D R C W+S SWKLRPN+GSI++QRP ILVLDDFK H+++ FIA LK +NTIVIFIPGRLTPLLQPLDRMLNKQMK ++R KYT Y
Sbjct: 63 MAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGG--KEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAY 315
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 372 bits (954), Expect = 1.000e-117 Identity = 186/255 (72.94%), Postives = 210/255 (82.35%), Query Frame = 1
Query: 1 MVWATLMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEVFEEHGNMDQTLIQHEMPVETILEKRGTKDARISTGYERKEKECFTLCLAVMADGKKVPLRMIFKGTPFIPPATPEKGRQTQPRKGSIAAEILPMNRTKFGHPAGGMSFGVQKKSWCDAR*CTLWVSESWKLRPNDGSIIKQRPSILVLDDFKYHREKYFIADLKGMSNTIVIFIPGRLTPLLQPLDRMLNKQMKWVMRGKYTTY 765
M WATLMKLRKAL+ERAGEIYA+ PPA GESPI+GE LS +QLE VT E+FEE GNMDQT +QHEMPVET LE G KDARI+TG KEKE FTLCLAV ADGKKVPLR+IFKGTPF+PPATP KG+ TQPRK SIA E+LP NR+K G P GGMSFGVQ+KSWCD R C LW+ +SWKLRPN+GSI++QR ILVLDDFK H++ FIA LK +NTIVIFIPG L PL QPLDRMLNKQMK ++RG YT +
Sbjct: 217 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGG--KEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAH 469
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 352 bits (902), Expect = 1.130e-117 Identity = 182/255 (71.37%), Postives = 203/255 (79.61%), Query Frame = 1
Query: 1 MVWATLMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEVFEEHGNMDQTLIQHEMPVETILEKRGTKDARISTGYERKEKECFTLCLAVMADGKKVPLRMIFKGTPFIPPATPEKGRQTQPRKGSIAAEILPMNRTKFGHPAGGMSFGVQKKSWCDAR*CTLWVSESWKLRPNDGSIIKQRPSILVLDDFKYHREKYFIADLKGMSNTIVIFIPGRLTPLLQPLDRMLNKQMKWVMRGKYTTY 765
M WAT+MKLR+ALV RAGEIYAR +PPA ESPIKGE L+ QL SV EVF+E GNMDQT +QHEMPVET LEK G KDARISTG KEKE FTL LAVMADGKKV R+IFKGTPFIPPA KG+ T PRK S+A EI P NR K HPA GMSFGVQ+KSW D R C W+S SWKLRPN+GSI++QRP ILVLDDFK H+++ +IA LK +NTIVI IPG LTPLLQPLDRMLNKQMK ++RGKYT Y
Sbjct: 63 MAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGG--KEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 315
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 356 bits (914), Expect = 1.920e-117 Identity = 183/279 (65.59%), Postives = 211/279 (75.63%), Query Frame = 1
Query: 1 MVWATLMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEVFEEHGNMDQTLIQHEMPVETILEKRGTKDARISTGY------------------------ERKEKECFTLCLAVMADGKKVPLRMIFKGTPFIPPATPEKGRQTQPRKGSIAAEILPMNRTKFGHPAGGMSFGVQKKSWCDAR*CTLWVSESWKLRPNDGSIIKQRPSILVLDDFKYHREKYFIADLKGMSNTIVIFIPGRLTPLLQPLDRMLNKQMKWVMRGKYTTY 765
M WATLMKLRKAL+ERAGEIYA+ PPA GESPI+GE LS +QLE VT E+F++ GNMDQT +Q+EMPVET LEK G KDARI+TG KEKE FTLCLAV ADG KVPLR+IFKGTPF+PPATP KG+ TQPRK SIA E+LP NR+K G P GGMSFGVQ+KSWCD R LW+ +SWKLRPN+GS+++QR ILVLDDFK H++ FIA LK +NTIVIFIPG LTPLLQPLDRMLNKQMK ++RG YT +
Sbjct: 150 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAH 428
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 350 bits (898), Expect = 9.480e-115 Identity = 182/255 (71.37%), Postives = 204/255 (80.00%), Query Frame = 1
Query: 1 MVWATLMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEVFEEHGNMDQTLIQHEMPVETILEKRGTKDARISTGYERKEKECFTLCLAVMADGKKVPLRMIFKGTPFIPPATPEKGRQTQPRKGSIAAEILPMNRTKFGHPAGGMSFGVQKKSWCDAR*CTLWVSESWKLRPNDGSIIKQRPSILVLDDFKYHREKYFIADLKGMSNTIVIFIPGRLTPLLQPLDRMLNKQMKWVMRGKYTTY 765
+ +ATLMKLR AL+ERAGEIYAR NPPASGESPIKG+ LSPAQLESV TEVFEE GNMDQT +Q EMPVET LEK G KDARISTG KEKE FTLCLAVMADG KVPLR+IFKG PFIPP+T +G+ TQPRKGSIAAE+LP N+T FG+P GMSFGVQ++SW DA CTLW+SESW RPN GS+IKQR SILVLDDF+ +NT VI IPG LTPLLQPLDRML+K+MK +MR +YT Y
Sbjct: 236 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGG--KEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFR--------------TNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQY 474
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 340 bits (872), Expect = 6.530e-113 Identity = 175/250 (70.00%), Postives = 197/250 (78.80%), Query Frame = 1
Query: 16 LMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEVFEEHGNMDQTLIQHEMPVETILEKRGTKDARISTGYERKEKECFTLCLAVMADGKKVPLRMIFKGTPFIPPATPEKGRQTQPRKGSIAAEILPMNRTKFGHPAGGMSFGVQKKSWCDAR*CTLWVSESWKLRPNDGSIIKQRPSILVLDDFKYHREKYFIADLKGMSNTIVIFIPGRLTPLLQPLDRMLNKQMKWVMRGKYTTY 765
+MKLR+ALV+RAGEIYAR +PPA ESPIKGE L+ QL SV EVFE+ GNMDQT +QHEMPVET LEK G KDAR+STG E EKE FTL LAV ADGKKV LR+IF GTPFIPP KG+ T PRK S+A E+ P NR K GHPA GMSFGVQ+KSW D R C W S SWKLRPN+GSI++QRP ILVLDDFK H+++ FIA LK +NTIVIFIPG LTPLLQPLDRMLNKQ K ++R KYT Y
Sbjct: 2 VMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGE--EKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAY 249
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 344 bits (883), Expect = 1.090e-112 Identity = 175/255 (68.63%), Postives = 202/255 (79.22%), Query Frame = 1
Query: 1 MVWATLMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEVFEEHGNMDQTLIQHEMPVETILEKRGTKDARISTGYERKEKECFTLCLAVMADGKKVPLRMIFKGTPFIPPATPEKGRQTQPRKGSIAAEILPMNRTKFGHPAGGMSFGVQKKSWCDAR*CTLWVSESWKLRPNDGSIIKQRPSILVLDDFKYHREKYFIADLKGMSNTIVIFIPGRLTPLLQPLDRMLNKQMKWVMRGKYTTY 765
M WATLMKLRKAL+ERAG+IYA+ PPA GE+PI+GE LS +QLE VT E+FEE GNMDQT +QHE PVE + KR + S ER FTLCLAV ADGKKVPLR+IFKGTPF+PPATP KG+ TQPRK SIA E+LP NR+K G P GGMSFGVQ+KSWCD R C LW+ +SWKLRPN+GSI++QR ILVLDDFK H++ FIA LK +NTIVIFIPG LTPLLQPLDRMLNKQMK ++RG YT +
Sbjct: 187 MAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVERLW-KRPVRRMPASPPEER-----FTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAH 435
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 345 bits (884), Expect = 1.130e-111 Identity = 177/255 (69.41%), Postives = 200/255 (78.43%), Query Frame = 1
Query: 1 MVWATLMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEVFEEHGNMDQTLIQHEMPVETILEKRGTKDARISTGYERKEKECFTLCLAVMADGKKVPLRMIFKGTPFIPPATPEKGRQTQPRKGSIAAEILPMNRTKFGHPAGGMSFGVQKKSWCDAR*CTLWVSESWKLRPNDGSIIKQRPSILVLDDFKYHREKYFIADLKGMSNTIVIFIPGRLTPLLQPLDRMLNKQMKWVMRGKYTTY 765
M WAT+MKL +ALV+RAGEIYAR +PPA ESPIKGE L+ QL SV EVFEE GNMDQ +QHEMPVET L+K G KDARISTG EKE FTL LAV ADGKKV R+IF+GTPFIPP KG+ T+PRK +A E+ P NR K GHPA GMSFGVQ+KSW D R C W+S SWKLRPN+GSI++QRP ILVLDDFK H ++ FIA LK +NTIVIFIPG LTPLLQPLDRMLNKQMK ++RGKYT Y
Sbjct: 257 MAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGN-EKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 510
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE) HSP 1 Score: 354 bits (909), Expect = 2.140e-111 Identity = 180/250 (72.00%), Postives = 205/250 (82.00%), Query Frame = 1
Query: 1 MVWATLMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEVFEEHGNMDQTLIQHEMPVETILEKRGTKDARISTGYERKEKECFTLCLAVMADGKKVPLRMIFKGTPFIPPATPEKGRQTQPRKGSIAAEILPMNRTKFGHPAGGMSFGVQKKSWCDAR*CTLWVSESWKLRPNDGSIIKQRPSILVLDDFKYHREKYFIADLKGMSNTIVIFIPGRLTPLLQPLDRMLNKQMKWVMRG 750
+ +ATLMKLR AL+ERAGEIYAR NPPASGESPIKG+ L+PAQLESV +VFEE GNMDQT +Q EMPVET LEKRG KDARISTG KEK+ FT CLAVMADG KVP R+IFKG PFIPP+T + + TQ RKG IAAE+L NRTKFG+P GM F VQ+KSWCDAR CTLW+SESW+ RPN GS+IKQR SILVLDDF+ HR + F+ DL+ +NT VI IPG LTPLLQPLDRMLNK+MK +MRG
Sbjct: 132 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGG--KEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRG 379 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9539.23565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9539.23565.1 >prot_P-canaliculata_contig9539.23565.1 ID=prot_P-canaliculata_contig9539.23565.1|Name=mRNA_P-canaliculata_contig9539.23565.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=171bp MVWATLMKLRKALVERAGEIYARCNPPASGESPIKGEGLSPAQLESVTTEback to top mRNA from alignment at P-canaliculata_contig9539:9036..10007- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9539.23565.1 ID=mRNA_P-canaliculata_contig9539.23565.1|Name=mRNA_P-canaliculata_contig9539.23565.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=972bp|location=Sequence derived from alignment at P-canaliculata_contig9539:9036..10007- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9539:9036..10007- >mRNA_P-canaliculata_contig9539.23565.1 ID=mRNA_P-canaliculata_contig9539.23565.1|Name=mRNA_P-canaliculata_contig9539.23565.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1026bp|location=Sequence derived from alignment at P-canaliculata_contig9539:9036..10007- (Pelvetia canaliculata dioecious)back to top |