mRNA_P-canaliculata_contig9399.23409.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig9399.23409.1
Unique NamemRNA_P-canaliculata_contig9399.23409.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Match: D8LL28_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL28_ECTSI)

HSP 1 Score: 469 bits (1207), Expect = 1.470e-156
Identity = 273/345 (79.13%), Postives = 297/345 (86.09%), Query Frame = 1
Query:    1 LLKWCG-KDFDGCILFDECHRAKNLYAAGGAAPTRAGAAVVELQERLPNARVVYCSATGASEPRNLGYMTRLGLWGAKGSPFPGGFKDFLSAVDGRGVGAMELVAMHLKQRGSFVCRTLSFRGCNFELVNDALAEDMEETYNEAAAFWQLLKRELARALSEKAEFLKRT-TMQEDLDMSSDDEGLESD----SDIVDDSDIESLTTRRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCVVIGLQSTGEASIDAALKSRG--QGTGXXXXXXXXXXXXXXXXXXXXXXXXXETTSTDYISAPQQTLLRVIRRCFPLPPRPRALREQEKE 1011
            LLKWCG +DFDGCIL DECHRAKNLYAAGG A T+AGAAVVELQ +LPNAR+VYCSATGASEPRNLGYMTRLGLWGA GSPFPGGFKDFL+ VDGRGVGAMELVAMHLKQRGSFVCRTLSF GC FELV D L E+MEETYNEAAAFWQ LKRELARA +EKA FL     ++EDLD+SS++E  E        ++DDSD ES   RRRHRSLKGG +WRYFWG+HQRFFRDLCIASKVPATIE A+QA+D  KCVVIGLQSTGEAS +AA+KSRG      XXXXXXXXXXXXXXXXXXXXXXXX ETTSTDYISAPQQTL+RVI RCFPLPPRPRA++ Q+KE
Sbjct:  404 LLKWCGGQDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTPVDGRGVGAMELVAMHLKQRGSFVCRTLSFSGCPFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKASFLSTPGILEEDLDLSSEEEEEEDPLGELDGMMDDSDTESAAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDKCVVIGLQSTGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETTSTDYISAPQQTLMRVIERCFPLPPRPRAMKMQDKE 748          
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Match: A0A6H5KPE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPE5_9PHAE)

HSP 1 Score: 447 bits (1151), Expect = 2.670e-151
Identity = 266/346 (76.88%), Postives = 291/346 (84.10%), Query Frame = 1
Query:    1 LLKWCG-KDFDGCILFDECHRAKNLYAAGGAAPTRAGAAVVELQERLPNARVVYCSATGASEPRNLGYMTRLGLWGAKGSPFPGGFKDFLSAVDGRGVGAMELVAMHLKQRGSFVCRTLSFRGCNFELVNDALAEDMEETYNEAAAFWQLLKRELARALSEKAEFLKRT-TMQEDLDMSSD----DEGLESDSDIVDDSDIESLTTRRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCVVIGLQSTGEASIDAALKSRG---QGTGXXXXXXXXXXXXXXXXXXXXXXXXXETTSTDYISAPQQTLLRVIRRCFPLPPRPRALREQEKE 1011
            LLKWCG KDFDGCIL DECHRAKNLYAAGG A T+AGAAVVELQ +LPNAR+VYCSATGASEPRNLGYMTRLGLWGA GSPFPGGFKDFL+AVDGRGVGAMELVAMHLKQ GSFVCRTLSF GC FELV D L E+MEETYNEAAAFWQ LKRELARA +EKA FL     ++EDLD+SS+    D+ L     ++DDSD ES+  RRRHRSLKGG +WRYFWG+HQRFFRDLCIASKVPATIE A+QA+D  K       STGEAS +AA+KSRG       XXXXXXXXXXXXXXXXXXXXXXXX ETTSTDYISAP+QTL+RVI RCFPLPPRPRA++ Q+KE
Sbjct:  181 LLKWCGGKDFDGCILLDECHRAKNLYAAGGGAATKAGAAVVELQAKLPNARIVYCSATGASEPRNLGYMTRLGLWGAIGSPFPGGFKDFLTAVDGRGVGAMELVAMHLKQTGSFVCRTLSFSGCAFELVTDVLGEEMEETYNEAAAFWQELKRELARAQAEKAAFLSTPGILEEDLDLSSEEEEEDDPLGELDGMIDDSDTESVAARRRHRSLKGGFVWRYFWGSHQRFFRDLCIASKVPATIEQAQQALDNDK-------STGEASTEAAMKSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAETTSTDYISAPRQTLMRVIERCFPLPPRPRAMKMQDKE 519          
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Match: A0A835ZH69_9STRA (P-loop containing NTP hydrolase pore-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH69_9STRA)

HSP 1 Score: 276 bits (707), Expect = 6.270e-86
Identity = 165/328 (50.30%), Postives = 196/328 (59.76%), Query Frame = 1
Query:    1 LLKWCG-KDFDGCILFDECHRAKNLYAAGGAAPT-RAGAAVVELQERLPNARVVYCSATGASEPRNLGYMTRLGLWGAKGSPFPGGFKDFLSAVDGRGVGAMELVAMHLKQRGSFVCRTLSFRGCNFEL-VNDALAEDMEETYNEAAAFWQLLKRELARALSEKAEFLKRTTMQEDLDMSSDDEGLESDSDIVDDSDIESLTTRRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCVVIGLQSTGEASIDAALKSRGQGTGXXXXXXXXXXXXXXXXXXXXXXXXXETTSTDYISAPQQTLLRVIRRCFPLP 975
            L+ W G   FDGC+L DECHRAKN Y+  G  P+ ++G AVVELQ RLPNARVVYCSATGASEPRNLGYMTRLGLWG +G+PFP GF+  L  VDG GVGAME++AMHLKQ G+F+CRTLSF GC FEL + D +       Y+ AAA WQ L+RE+A +L E+   L+               GL    D++           RR  S +   +WRYFWGAHQRFFRDLCIASKVPA I  A+ A+D  +  VIGLQSTGEA   AAL                                   T  D  SAP  TL RV+++C PLP
Sbjct:  225 LIAWAGGAAFDGCLLLDECHRAKNFYSGAGNGPSSQSGRAVVELQARLPNARVVYCSATGASEPRNLGYMTRLGLWG-QGTPFPSGFEQLLGTVDGHGVGAMEMMAMHLKQSGAFLCRTLSFAGCGFELPMCDDVTPGALAVYDRAAALWQRLRREVAASLDERGRLLRLPNPAGP--------GLP---DLI-----------RRTESAQ--RVWRYFWGAHQRFFRDLCIASKVPAAIAIARAALDAGQACVIGLQSTGEAGTLAALAEA-----------------------------QSETLPDTFSAPHHTLRRVVKKCLPLP 498          
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Match: F0YNP5_AURAN (AAA_34 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNP5_AURAN)

HSP 1 Score: 267 bits (683), Expect = 2.180e-82
Identity = 155/328 (47.26%), Postives = 191/328 (58.23%), Query Frame = 1
Query:    1 LLKWCGK-DFDGCILFDECHRAKNLYA-AGGAAPTRAGAAVVELQERLPNARVVYCSATGASEPRNLGYMTRLGLWGAKGSPFPGGFKDFLSAVDGRGVGAMELVAMHLKQRGSFVCRTLSFRGCNFELVNDALAEDMEETYNEAAAFWQLLKRELARALSEKAEFLKRTTMQEDLDMSSDDEGLESDSDIVDDSDI-ESLTTRRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCVVIGLQSTGEASIDAALKSRGQGTGXXXXXXXXXXXXXXXXXXXXXXXXXETTSTDYISAPQQTLLRVIRRCFPLP 975
            +L WCG+  F GC+LFDE H+AKNL+  +GG  PT+ G AV+ELQ  LP+ARVVYCSATGASEPR+LGYM RLGLWG    PF   F+ FL+ VD RGVG MELVAMHLKQRG+ VCR LSF+ C FEL++  +   +E+ Y+ AA  W +LKR +   L                       G  +D   V + D+ E    RR H     G LWRYFWGAHQRFF+DLC+ASKVPA I+ AK A+   KCVVIGLQSTGEA    A++  G                                  D++SAP+ TL R +R+ F  P
Sbjct:  223 ILAWCGRASFGGCLLFDESHKAKNLFGGSGGGKPTKVGQAVMELQTSLPDARVVYCSATGASEPRHLGYMDRLGLWGGDACPFAS-FRSFLTEVDKRGVGMMELVAMHLKQRGALVCRALSFKNCTFELMDGIMNVHVEKVYDRAAELWDVLKRVMEEMLRA---------------------GELADPFAVSEEDLAEGKKARRGH-----GMLWRYFWGAHQRFFKDLCVASKVPAVIDVAKSALADGKCVVIGLQSTGEARTKDAIEEYGD------------------------------VMDDFVSAPRATLDRFVRKVFACP 493          
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Match: A0A7S3JZA5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZA5_9STRA)

HSP 1 Score: 271 bits (692), Expect = 2.670e-78
Identity = 151/328 (46.04%), Postives = 196/328 (59.76%), Query Frame = 1
Query:    1 LLKWCGKD-FDGCILFDECHRAKNLYAAG-GAAPTRAGAAVVELQERLPNARVVYCSATGASEPRNLGYMTRLGLWGAK-GSPFPGGFKDFLSAVDGRGVGAMELVAMHLKQRGSFVCRTLSFRGCNFELVNDALAEDMEETYNEAAAFWQLLKRELARALSEKAEFLKRTTMQEDLDMSSDDEGLESDSDIVDDSDIESLTTRRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCVVIGLQSTGEASIDAALKSRGQGTGXXXXXXXXXXXXXXXXXXXXXXXXXETTSTDYISAPQQTLLRVIRRCFPLP 975
            L+ WCG + F GCI+FDE H+AKNL+A+G GA PT+ G AV+E+Q  LPNAR+VYCSATGASEPR+ GYM RLGLWG+  G+PFP  F+ FL  V+ RGVG MELVAMHLKQ+G+ VCR LSF+ C FEL++  +   +E  Y+ AA  W  L+  L        E  +R  +++  D   DD           D D   L T++       G  WRYFWGAHQRFF+DLC+ASKVP  IE  +QA+ + KC VIGLQSTGEA    A++  G                              +   D++SAP+ TL R+I++ F +P
Sbjct:  264 LVTWCGGEKFQGCIMFDESHKAKNLFASGSGAKPTKVGQAVLEIQRLLPNARIVYCSATGASEPRHFGYMERLGLWGSHPGAPFPN-FEVFLDEVESRGVGMMELVAMHLKQQGALVCRALSFKNCTFELIDGVMDAHVERVYDRAAEIWDQLRLVLL-------ELFRRKELKDPFDKPDDD-----------DEDEYGLVTKKTQNKTNHGIFWRYFWGAHQRFFKDLCVASKVPKVIECVEQALKEDKCCVIGLQSTGEARTADAVEEYG------------------------------SVMDDFVSAPRATLERLIKKTFVVP 542          
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Match: A0A8J2S7U1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7U1_9STRA)

HSP 1 Score: 266 bits (679), Expect = 2.000e-77
Identity = 151/325 (46.46%), Postives = 189/325 (58.15%), Query Frame = 1
Query:    1 LLKWCGKDFDGCILFDECHRAKNLYAAGGAAPTRAGAAVVELQERLPNARVVYCSATGASEPRNLGYMTRLGLWGAKGSPFPGGFKDFLSAVDGRGVGAMELVAMHLKQRGSFVCRTLSFRGCNFELVNDALAEDMEETYNEAAAFWQLLKRELARALSEKAEFLKRTTMQEDLDMSSDDEGLESDSDIVDDSDIESLTTRRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCVVIGLQSTGEASIDAALKSRGQGTGXXXXXXXXXXXXXXXXXXXXXXXXXETTSTDYISAPQQTLLRVIRRCFPLP 975
            LL+W    F+G +LFDE H+AKNL+   G  PT+ G AV++LQ  LP ARVVYCSATGASEP++LGYM RLGLWG   +PF G F DF  AV+ RGVG MELVAMHLKQRG+ V R LSF+ C FELVND +   ME  Y+ +   W LL++ LA                         EGLE    +V+D   +     RR      G LWRYFWGAHQRFF+DLC+ASKVPA ++ A+Q++  KKCVVIGLQSTGEA    A++  G+                                 D++SAP+ TL R+I++ F  P
Sbjct:  241 LLEWASPGFEGGLLFDESHKAKNLFGGNGGKPTKTGQAVLKLQTALPRARVVYCSATGASEPKHLGYMDRLGLWGGSDTPF-GDFDDFRRAVESRGVGMMELVAMHLKQRGALVSRALSFKSCTFELVNDVMTPHMERVYDRSVEVWDLLRQCLA-------------------------EGLELG--VVNDPFKKPDAPVRR--GTPNGVLWRYFWGAHQRFFKDLCVASKVPAALQVARQSLKDKKCVVIGLQSTGEARTKDAIEEHGE------------------------------VFDDFVSAPRATLERLIKKVFASP 505          
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Match: A0A7J7L1U0_9MAGN (AAA_34 domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7L1U0_9MAGN)

HSP 1 Score: 253 bits (646), Expect = 6.530e-77
Identity = 145/335 (43.28%), Postives = 191/335 (57.01%), Query Frame = 1
Query:    1 LLKWCGKDFDGCILFDECHRAKNLYAAGGAAPTRAGAAVVELQERLPNARVVYCSATGASEPRNLGYMTRLGLWGAKGSPFPGGFKDFLSAVDGRGVGAMELVAMHLKQRGSFVCRTLSFRGCNFELVNDALAEDMEETYNEAAAFWQLLKRELARALSEKAEFLKRTTMQEDLDMSSDDEGLESDSDIVDDSDIESLTTRRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCVVIGLQSTGEASIDAALKSRGQGTGXXXXXXXXXXXXXXXXXXXXXXXXXETTSTDYISAPQQTLLRVIRRCFPLPPRPRALREQE 1005
            LLKWCG  +DG ++FDECH+AKNL    G+ PTR GAAV ELQ++LP+ARV+YCSATGASEPRNLGYM RLGLWGA G+ F   F+DFL A+D  GVGA+ELVAM +K RG +VCRTLS++G  FE+V   L  +M E Y ++A FW  L+ EL  A +                             ++ D    S            G LWR +W +HQRFFR +C+++KVPA ++ AK+A+ + KCVVIGLQSTGEA  + A+   G                                  D++S P++ LL+ +   +PLPP P  L  +E
Sbjct:  133 LLKWCGSGYDGLVVFDECHKAKNLVPEAGSLPTRTGAAVKELQQKLPSARVIYCSATGASEPRNLGYMVRLGLWGA-GTCF-NEFRDFLGALDKGGVGALELVAMDMKARGMYVCRTLSYKGAEFEVVEAPLEAEMLEMYKKSAEFWAELRVELLSASA-----------------------------VLSDEKPNS------------GQLWRQYWASHQRFFRHMCMSAKVPAAVKLAKKALLENKCVVIGLQSTGEARTEEAVSKYG------------------------------FEMDDFVSGPRELLLKFVEDNYPLPPMPDTLSGEE 394          
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Match: A0A7S4A0M8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0M8_9STRA)

HSP 1 Score: 266 bits (679), Expect = 1.210e-76
Identity = 151/325 (46.46%), Postives = 189/325 (58.15%), Query Frame = 1
Query:    1 LLKWCGKDFDGCILFDECHRAKNLYAAGGAAPTRAGAAVVELQERLPNARVVYCSATGASEPRNLGYMTRLGLWGAKGSPFPGGFKDFLSAVDGRGVGAMELVAMHLKQRGSFVCRTLSFRGCNFELVNDALAEDMEETYNEAAAFWQLLKRELARALSEKAEFLKRTTMQEDLDMSSDDEGLESDSDIVDDSDIESLTTRRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCVVIGLQSTGEASIDAALKSRGQGTGXXXXXXXXXXXXXXXXXXXXXXXXXETTSTDYISAPQQTLLRVIRRCFPLP 975
            LL+W    F+G +LFDE H+AKNL+   G  PT+ G AV++LQ  LP ARVVYCSATGASEP++LGYM RLGLWG   +PF G F DF  AV+ RGVG MELVAMHLKQRG+ V R LSF+ C FELVND +   ME  Y+ +   W LL++ LA                         EGLE    +V+D   +     RR      G LWRYFWGAHQRFF+DLC+ASKVPA ++ A+Q++  KKCVVIGLQSTGEA    A++  G+                                 D++SAP+ TL R+I++ F  P
Sbjct:  241 LLEWASPGFEGGLLFDESHKAKNLFGGNGGKPTKTGQAVLKLQTALPRARVVYCSATGASEPKHLGYMDRLGLWGGSDTPF-GDFDDFRRAVESRGVGMMELVAMHLKQRGALVSRALSFKSCTFELVNDVMTPHMERVYDRSVEVWDLLRQCLA-------------------------EGLELG--VVNDPFKKPDAPVRR--GTPNGVLWRYFWGAHQRFFKDLCVASKVPAALQVARQSLKDKKCVVIGLQSTGEARTKDAIEEHGE------------------------------VFDDFVSAPRATLERLIKKVFASP 505          
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Match: A0A835VDC6_VANPL (PHD-type domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835VDC6_VANPL)

HSP 1 Score: 254 bits (650), Expect = 1.940e-74
Identity = 147/335 (43.88%), Postives = 186/335 (55.52%), Query Frame = 1
Query:    1 LLKWCGKDFDGCILFDECHRAKNLYAAGGAAPTRAGAAVVELQERLPNARVVYCSATGASEPRNLGYMTRLGLWGAKGSPFPGGFKDFLSAVDGRGVGAMELVAMHLKQRGSFVCRTLSFRGCNFELVNDALAEDMEETYNEAAAFWQLLKRELARALSEKAEFLKRTTMQEDLDMSSDDEGLESDSDIVDDSDIESLTTRRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCVVIGLQSTGEASIDAALKSRGQGTGXXXXXXXXXXXXXXXXXXXXXXXXXETTSTDYISAPQQTLLRVIRRCFPLPPRPRALREQE 1005
            LL+WCG DFDG I+FDECH+AKNL    G   TR G AV+E+Q RLP +RVVYCSATGASEPRN+GYMTRLGLWGA G+ F   F DFL A+D  GVGA+ELVAM +K RG +VCRTLS++G  FE++   L E+M + Y +AA FW  L+ EL  A +    FL                                              +WR +W +HQRFFR +C+A+KVPA +  AKQA+ + KCVVIGLQSTGEA  + A+   G                                  D++S PQ+ LL++I   +PLPP+P   R  E
Sbjct:  329 LLQWCGSDFDGLIVFDECHKAKNLIPEAGGQATRTGEAVLEIQARLPESRVVYCSATGASEPRNMGYMTRLGLWGA-GTCFQR-FHDFLGALDKGGVGALELVAMDMKARGMYVCRTLSYKGVEFEVIEAPLEEEMMDMYKKAAEFWAELRVELLSASA----FLPE-------------------------------------EKPNSSQVWRLYWASHQRFFRHMCMAAKVPAAVRLAKQALAENKCVVIGLQSTGEARTEEAVTKYG------------------------------LELDDFVSGPQELLLKLIEENYPLPPKPDLTRRDE 590          
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Match: A0A2P2LR61_RHIMU (AAA_34 domain-containing protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LR61_RHIMU)

HSP 1 Score: 246 bits (629), Expect = 7.130e-74
Identity = 145/328 (44.21%), Postives = 184/328 (56.10%), Query Frame = 1
Query:    1 LLKWCGKDFDGCILFDECHRAKNLYAAGGAAPTRAGAAVVELQERLPNARVVYCSATGASEPRNLGYMTRLGLWGAKGSPFPGGFKDFLSAVDGRGVGAMELVAMHLKQRGSFVCRTLSFRGCNFELVNDALAEDMEETYNEAAAFWQLLKRELARALSEKAEFLKRTTMQEDLDMSSDDEGLESDSDIVDDSDIESLTTRRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCVVIGLQSTGEASIDAALKSRGQGTGXXXXXXXXXXXXXXXXXXXXXXXXXETTSTDYISAPQQTLLRVIRRCFPLPPRP 984
            L+ WCG  FDG ++FDECH+AKNL    G+ PTR G AV+E+Q RLP+A V+YCSATGASEPRN+GYM RLGLWGA G+ F   F+ FL A+D  GVGA+ELVAM +K RG +VCRTLS+RG  FE+V   L   M E Y +AA FW  L+ EL  A S    FL                          D  I S              LWR +W +HQRFFR +C+++KVPAT+  AKQA+ + KCVVIGLQSTGEA  + A+   G                              +   D+IS P++ LL+ +   +PLP +P
Sbjct:  271 LVNWCGSGFDGLVIFDECHKAKNLVPESGSQPTRTGEAVLEIQARLPDACVIYCSATGASEPRNMGYMVRLGLWGA-GTCFTD-FQKFLGALDKGGVGALELVAMDMKARGMYVCRTLSYRGVEFEVVEAPLEAQMTEMYKKAAEFWAELRVELLTASS----FLPH------------------------DKPISSQ-------------LWRLYWSSHQRFFRHMCMSAKVPATVRLAKQALMEDKCVVIGLQSTGEARTEEAVTKYG------------------------------SELDDFISGPRELLLKFVEENYPLPEKP 525          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9399.23409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL28_ECTSI1.470e-15679.13Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KPE5_9PHAE2.670e-15176.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZH69_9STRA6.270e-8650.30P-loop containing NTP hydrolase pore-1-domain-cont... [more]
F0YNP5_AURAN2.180e-8247.26AAA_34 domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S3JZA5_9STRA2.670e-7846.04Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2S7U1_9STRA2.000e-7746.46Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7J7L1U0_9MAGN6.530e-7743.28AAA_34 domain-containing protein n=1 Tax=Kingdonia... [more]
A0A7S4A0M8_9STRA1.210e-7646.46Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835VDC6_VANPL1.940e-7443.88PHD-type domain-containing protein n=1 Tax=Vanilla... [more]
A0A2P2LR61_RHIMU7.130e-7444.21AAA_34 domain-containing protein n=1 Tax=Rhizophor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9399contigP-canaliculata_contig9399:1473..5190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score473.4
Seed ortholog evalue8.9e-131
Seed eggNOG ortholog2880.D8LL28
EggNOG free text desc.cellular response to interleukin-11
EggNOG OGsKOG1513@1,KOG1513@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-27_000880.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size1020
Cds size1020
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9399.23409.1prot_P-canaliculata_contig9399.23409.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig9399 1473..5190 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817307.436802-CDS-P-canaliculata_contig9399:1472..16211622817307.436802-CDS-P-canaliculata_contig9399:1472..1621Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9399 1473..1621 +
1693495213.534928-CDS-P-canaliculata_contig9399:1472..16211693495213.534928-CDS-P-canaliculata_contig9399:1472..1621Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9399 1473..1621 +
1622817307.4481049-CDS-P-canaliculata_contig9399:2460..26891622817307.4481049-CDS-P-canaliculata_contig9399:2460..2689Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9399 2461..2689 +
1693495213.559295-CDS-P-canaliculata_contig9399:2460..26891693495213.559295-CDS-P-canaliculata_contig9399:2460..2689Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9399 2461..2689 +
1622817307.4610608-CDS-P-canaliculata_contig9399:3654..38841622817307.4610608-CDS-P-canaliculata_contig9399:3654..3884Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9399 3655..3884 +
1693495213.5752497-CDS-P-canaliculata_contig9399:3654..38841693495213.5752497-CDS-P-canaliculata_contig9399:3654..3884Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9399 3655..3884 +
1622817307.472957-CDS-P-canaliculata_contig9399:4311..44471622817307.472957-CDS-P-canaliculata_contig9399:4311..4447Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9399 4312..4447 +
1693495213.5847926-CDS-P-canaliculata_contig9399:4311..44471693495213.5847926-CDS-P-canaliculata_contig9399:4311..4447Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9399 4312..4447 +
1622817307.4847364-CDS-P-canaliculata_contig9399:4914..51901622817307.4847364-CDS-P-canaliculata_contig9399:4914..5190Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9399 4915..5190 +
1693495213.59633-CDS-P-canaliculata_contig9399:4914..51901693495213.59633-CDS-P-canaliculata_contig9399:4914..5190Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9399 4915..5190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig9399.23409.1

>prot_P-canaliculata_contig9399.23409.1 ID=prot_P-canaliculata_contig9399.23409.1|Name=mRNA_P-canaliculata_contig9399.23409.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=340bp
LLKWCGKDFDGCILFDECHRAKNLYAAGGAAPTRAGAAVVELQERLPNAR
VVYCSATGASEPRNLGYMTRLGLWGAKGSPFPGGFKDFLSAVDGRGVGAM
ELVAMHLKQRGSFVCRTLSFRGCNFELVNDALAEDMEETYNEAAAFWQLL
KRELARALSEKAEFLKRTTMQEDLDMSSDDEGLESDSDIVDDSDIESLTT
RRRHRSLKGGTLWRYFWGAHQRFFRDLCIASKVPATIEHAKQAIDQKKCV
VIGLQSTGEASIDAALKSRGQGTGGGGNVDDDKTGGGGGAATATAVAAAE
TTSTDYISAPQQTLLRVIRRCFPLPPRPRALREQEKEQER
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mRNA from alignment at P-canaliculata_contig9399:1473..5190+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9399.23409.1 ID=mRNA_P-canaliculata_contig9399.23409.1|Name=mRNA_P-canaliculata_contig9399.23409.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=3718bp|location=Sequence derived from alignment at P-canaliculata_contig9399:1473..5190+ (Pelvetia canaliculata dioecious)
CTCCTCAAGTGGTGCGGGAAGGACTTCGATGGCTGCATCCTCTTTGACGA GTGCCATCGGGCGAAGAACCTCTACGCCGCCGGAGGAGCTGCTCCGACGA GGGCCGGGGCCGCCGTCGTCGAGCTCCAGGAAAGGCTTCCAAACGCCAGG TTTGTGTTTTTGAATGATTGTGTGGCTGTTTGTGTGTGTGTGTAATATCT AAATTGCATAATAACCGCTCAATCCGGCCTGTCATGCTATTTTTTTTAAT ACAGTATTAGTAGTCATTCCATACTAATAATAGCATTAATAATTTTAATA CTTTTAGCGGTATCAATACTTGAACTGGGGGGATCAATGTATGTTGTTAC GTACGATGTGCGCGTCCCCTCTTTCTTTTTTTGTCTTTTTTAGTTTGTTC TTTCTCTCCATCCTACGCGGCAACGAGGTTTTGGCGGTTGTTTTAATGCG TTGTTGCTGCTGTGCGCGTAACGGCTTTGACTAAAATGACTACCAGGTAT TATTTATATAATAATTTAATGATATGCACGTGAGAGGGCCCGAAGCGATC TCTCGGCAGATCTGTCTCGTTTTCGGTGTCTTCTCCCCTGGACTGTTAAT CGTATTTATATTATACTCCCTCGTAGAACCGTGGCTATGAGGTTGGCCCA TTGACCAGTATGTACTACAAATATACCCCCTGTAGCGGAGCACAGCATCG TAGCCAGTCACAATCAATCGATCGAACACTTTCCTCAACCCTACGGTGAC TTCATCTGCCAACTTTGTGAACTTCGGTATGTGAAGCAAGTTAATATCGT TATTCAGCGAGTCGCGTAACATGTTCCCTCAGTAAGGCGGCGGATAACGT CAGAGAGTCAGCGTGGAGGGTCGACTGATCAGTCGATCGATGATACCGCC CGTGGCATGAGCTTTATGTGTGACCTTCCCCGTTCCATTGTTATTGTTTG GGCGGGCTGCCTGCTGTTTTTTGGCGGTGGCTCGGCAGGGTCGTGTACTG CTCGGCGACCGGAGCTTCAGAGCCGCGCAATCTTGGCTACATGACCCGCC TTGGGCTCTGGGGGGCGAAGGGAAGCCCCTTTCCGGGGGGTTTCAAGGAT TTCCTATCGGCCGTGGACGGTAGGGGGGTTGGCGCGATGGAGCTCGTGGC GATGCACCTGAAACAGCGGGGTTCCTTCGTCTGCCGCACCCTGTCCTTCC GAGGCTGCAACTTTGAGGTACAGACGTATACGGTTTGATGTTCGGACATT TTTACCTTTGCTTTAGTGGTAAAGCTATTCCACGCACTCACTACCGTACC TTATGTATATTTTAATGGTTGTAGTACGGAGTGATGGCGACGGCAGCGGC GTAGTCGCCGTCGGACACGGGCGAGGTGAACATTTACGAGTACCCTTGTT ATTGTTGGCATCCGTGGCAAGGCTTCCCCGACAGTTTTCGACAGCCACGA AGCGGGTCACGCAGGTTCCTGTCCTCGGATGTATGTCGGCTGGGTCCATG GCTTCGAATACTTTCTTTTATGTCCGTCGTTTTTTTCGACGAGTTTCTCC TATCCACCGTTTTTGGCGCGCGTTGACGCGCACCAGTTACGATACTGGCG TTGTTACACTTTTTCGATAGCTAAGCCCCCCTCTGCCCTGTGATGCAAGC AGTGCATTGAAGCATTCTGGGACATGACCGTTTCTGAACAGCATGAATGA CTTGGAGCGTGCTATAGTTTTGCGGTTGACCCGAGTTTTTGATACATTTT TTATAGCTGCGCCGATCCAGTTGCTCTAGATCAAACATCGGTTTGAATGA GGTGTGATTTTCCTTTTATGTTCCATTTACTGTAATAGAGTAACTGTATA CTGTTATTAGAAAACAAAAAGAAAAGGAGGATGCGAAGGCGTATACTATC AAATCACGCTGAGTACCTGTGCTTGGCTAATAAACGCGTTGGAACTCTAC GGCTATGTCAAGGTTAGGCAACACGCTACGACTATCTAAACACGTTTGCT GCAGCACTAAAGTGTTTCGAACCGTTTTAACTGTACGCTACCATCTGCGG TAGTAGTTCCCCGATGGTTTATACCGAAGCTTACCTCGTACCCCTAAGGT ATTGGTTACGTGTTACACACGCGCGGGGCTGACCATGGGTCGGGCTGCTT TCTTCTCTTGCTCTACCTCGCCTCTCTTGTAGCTGGTAAACGACGCCCTT GCGGAGGACATGGAGGAGACCTACAATGAGGCCGCGGCATTCTGGCAGCT CCTCAAGAGGGAGCTCGCGCGAGCCCTGTCGGAGAAGGCGGAGTTCTTGA AGCGGACGACCATGCAGGAAGATCTCGACATGTCGTCGGACGACGAGGGC CTAGAGAGTGATTCGGATATCGTGGATGATTCGGACATCGAGTCCCTTAC CACACGCCGAAGGTTGGTTTGAGGGTTTTATGGGAGGCACGGGCGGGATA GGGATTGGAGAGCAGGACGGAGCGAGGGGAAGGAAGGGAAATGGCTGCAT CCAATGGCAAAACCATGGCTTTCGGCGACGGAGCCGATCGGTTCTCCGAA TCGTTTGGATGTGTTCCTGGTCTTCTGTGCTGTTTATTGTTTGTTGTGTG GTCGAGGTGACTGTTTCCTACCACCTGTTTCGGTTGGGAACTAGAGAAAA AGCGCTGTGGAAACTTTGGGGAGACCATTTACGCTGTGGCGTTGGAACGA GTTCATCAAACACATGCGTGTGAATTTCTCCACTCTTTGAAACATAGGAG AAGATGACCGTTTAAATAGAGACGACGCTCTCAAATTATTCTCCTGTGCG GTTTATCTGCTGGCGCTCGGGTGGGTTTCGGCTCGACAGGCACCGATCGC TCAAGGGAGGCACCCTCTGGCGTTATTTCTGGGGCGCACACCAGAGGTTC TTCCGTGATTTGTGCATCGCCTCCAAGGTGCCGGCCACGATCGAGCACGC GAAGCAGGCCATCGACCAGAAGAAGGTAACTGCTGTTCTGTGCACGAAGT AACAATCATTCGTGGGTCTGGGCGAGCGCTGGGAAGCGGAGGGAGATCAA ACCGCGTTTGTACTCTGTGCTGTTGTGCACCGTATGAGACATATATATAA CGTGCTTTGTTCGCGGTCTGTTGATAGGAGGGCCTATGGTTTTGGCACTC TTAGGTGGGTGGAGGGGGAGGTGTACTCCGCGTTTCACCCTCCGTATCAT TTTTCTCTTTGAGGAAGACCGCGCGGGAACGCCTTTGAGATTTTTGCGAA CCCCTCTCTACGTGCTCGGGCTTGAAGTCCCACGGCTTGTGTCCACGACG AGGGATGAGGTTGGGGGTTCCGTTTCCCCGCGCGGTATGACCCTGTCACA ATCTATATTATATATATACATTATATATGTGTCGTACCCCACGAACCCCG TCCCCGTTGCTGTCCCTGCCCACCTTTCAACACCCCTAAAAGTGCGTGGT GATCGGCCTCCAGAGTACTGGAGAGGCCAGCATAGACGCGGCGCTGAAGT CCCGGGGACAGGGGACAGGAGGAGGAGGGAACGTCGACGACGACAAAACC GGCGGTGGCGGCGGGGCTGCGACGGCAACGGCGGTAGCGGCAGCGGAGAC GACCTCGACCGACTATATCTCGGCCCCCCAGCAGACTCTGCTCCGAGTGA TCAGGCGGTGTTTCCCGCTGCCTCCGAGGCCGCGGGCACTGCGAGAGCAG GAGAAAGAGCAAGAGCGG
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Coding sequence (CDS) from alignment at P-canaliculata_contig9399:1473..5190+

>mRNA_P-canaliculata_contig9399.23409.1 ID=mRNA_P-canaliculata_contig9399.23409.1|Name=mRNA_P-canaliculata_contig9399.23409.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2040bp|location=Sequence derived from alignment at P-canaliculata_contig9399:1473..5190+ (Pelvetia canaliculata dioecious)
CTCCTCAAGTGGTGCGGGAAGGACTTCGATGGCTGCATCCTCTTTGACGA
GTGCCATCGGGCGAAGAACCTCTACGCCGCCGGAGGAGCTGCTCCGACGA
GGGCCGGGGCCGCCGTCGTCGAGCTCCAGGAAAGGCTTCCAAACGCCAGC
TCCTCAAGTGGTGCGGGAAGGACTTCGATGGCTGCATCCTCTTTGACGAG
TGCCATCGGGCGAAGAACCTCTACGCCGCCGGAGGAGCTGCTCCGACGAG
GGCCGGGGCCGCCGTCGTCGAGCTCCAGGAAAGGCTTCCAAACGCCAGGG
TCGTGTACTGCTCGGCGACCGGAGCTTCAGAGCCGCGCAATCTTGGCTAC
ATGACCCGCCTTGGGCTCTGGGGGGCGAAGGGAAGCCCCTTTCCGGGGGG
TTTCAAGGATTTCCTATCGGCCGTGGACGGTAGGGGGGTTGGCGCGATGG
AGCTCGTGGCGATGCACCTGAAACAGCGGGGTTCCTTCGTCTGCCGCACC
CTGTCCTTCCGAGGCTGCAACTTTGAGGGTCGTGTACTGCTCGGCGACCG
GAGCTTCAGAGCCGCGCAATCTTGGCTACATGACCCGCCTTGGGCTCTGG
GGGGCGAAGGGAAGCCCCTTTCCGGGGGGTTTCAAGGATTTCCTATCGGC
CGTGGACGGTAGGGGGGTTGGCGCGATGGAGCTCGTGGCGATGCACCTGA
AACAGCGGGGTTCCTTCGTCTGCCGCACCCTGTCCTTCCGAGGCTGCAAC
TTTGAGCTGGTAAACGACGCCCTTGCGGAGGACATGGAGGAGACCTACAA
TGAGGCCGCGGCATTCTGGCAGCTCCTCAAGAGGGAGCTCGCGCGAGCCC
TGTCGGAGAAGGCGGAGTTCTTGAAGCGGACGACCATGCAGGAAGATCTC
GACATGTCGTCGGACGACGAGGGCCTAGAGAGTGATTCGGATATCGTGGA
TGATTCGGACATCGAGTCCCTTACCACACGCCGAAGCTGGTAAACGACGC
CCTTGCGGAGGACATGGAGGAGACCTACAATGAGGCCGCGGCATTCTGGC
AGCTCCTCAAGAGGGAGCTCGCGCGAGCCCTGTCGGAGAAGGCGGAGTTC
TTGAAGCGGACGACCATGCAGGAAGATCTCGACATGTCGTCGGACGACGA
GGGCCTAGAGAGTGATTCGGATATCGTGGATGATTCGGACATCGAGTCCC
TTACCACACGCCGAAGGCACCGATCGCTCAAGGGAGGCACCCTCTGGCGT
TATTTCTGGGGCGCACACCAGAGGTTCTTCCGTGATTTGTGCATCGCCTC
CAAGGTGCCGGCCACGATCGAGCACGCGAAGCAGGCCATCGACCAGAAGA
AGGCACCGATCGCTCAAGGGAGGCACCCTCTGGCGTTATTTCTGGGGCGC
ACACCAGAGGTTCTTCCGTGATTTGTGCATCGCCTCCAAGGTGCCGGCCA
CGATCGAGCACGCGAAGCAGGCCATCGACCAGAAGAAGTGCGTGGTGATC
GGCCTCCAGAGTACTGGAGAGGCCAGCATAGACGCGGCGCTGAAGTCCCG
GGGACAGGGGACAGGAGGAGGAGGGAACGTCGACGACGACAAAACCGGCG
GTGGCGGCGGGGCTGCGACGGCAACGGCGGTAGCGGCAGCGGAGACGACC
TCGACCGACTATATCTCGGCCCCCCAGCAGACTCTGCTCCGAGTGATCAG
GCGGTGTTTCCCGCTGCCTCCGAGGCCGCGGGCACTGCGAGAGCAGGAGA
AAGAGCAAGAGCGGTGCGTGGTGATCGGCCTCCAGAGTACTGGAGAGGCC
AGCATAGACGCGGCGCTGAAGTCCCGGGGACAGGGGACAGGAGGAGGAGG
GAACGTCGACGACGACAAAACCGGCGGTGGCGGCGGGGCTGCGACGGCAA
CGGCGGTAGCGGCAGCGGAGACGACCTCGACCGACTATATCTCGGCCCCC
CAGCAGACTCTGCTCCGAGTGATCAGGCGGTGTTTCCCGCTGCCTCCGAG
GCCGCGGGCACTGCGAGAGCAGGAGAAAGAGCAAGAGCGG
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