mRNA_P-canaliculata_contig93369.23345.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Match: D7G204_ECTSI (PPPDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G204_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 1.990e-20 Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 1
Query: 1 AQVILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYGGGGGIFDHDPKKGEKVTF 171
+V LNVYDL+P+NE+ HP+GLG +HSGLE++GREYT+ GGGGIFDH+P+K F
Sbjct: 9 TEVTLNVYDLSPVNEFGHPIGLGVFHSGLEVDGREYTFAGGGGIFDHEPRKAPGARF 65
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Match: A0A7S1CA67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA67_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 9.340e-15 Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 1
Query: 7 VILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYGGGGGIFDHDPKKGEKVTF 171
V LNVYDL+P+N+++ +GLGA+HSGLE+ G EY++G GGG+F H PK E F
Sbjct: 83 VYLNVYDLSPVNDYLWGLGLGAFHSGLEVYGTEYSFGAGGGVFSHPPKAAEGAKF 137
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Match: A0A7R9UE51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE51_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.040e-14 Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 1 AQVILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYGGGGGIFDHDPK 150
A V+L+VYDL N+W++PVGLGA+HSG+E+ G EYT+ G+F H PK
Sbjct: 33 APVVLHVYDLADANDWLYPVGLGAFHSGVEVLGEEYTFASEAGVFSHSPK 82
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Match: A0A1E7FWR6_9STRA (DUF862-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWR6_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 8.000e-14 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 1 AQVILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYG-GGGGIFDHDPKKGEKVTF 171
++V+LNVYDL P N++++P+G G H+G+EI GREY+YG GGGGIFD P++ F
Sbjct: 16 SKVLLNVYDLAPANDYLYPIGWGLNHTGVEINGREYSYGSGGGGIFDGPPREAPGARF 73
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Match: K0RSF7_THAOC (PPPDE domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RSF7_THAOC) HSP 1 Score: 72.4 bits (176), Expect = 1.370e-13 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 1 AQVILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYGGGGGIFDHDPKKGEKVTF 171
VILNVYDL+P NE++ VGLG +HSG+E+ GREY++ GGG+FD PK+ F
Sbjct: 106 TSVILNVYDLSPANEYLCSVGLGLHHSGVEVLGREYSFASGGGVFDSSPKEAPGAKF 162
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Match: A0A7S1YZ49_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZ49_TRICV) HSP 1 Score: 69.7 bits (169), Expect = 1.650e-13 Identity = 27/57 (47.37%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 1 AQVILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYGGGGGIFDHDPKKGEKVTF 171
+V+LN+YDLTP NE+++P+G G +HSG+EI G EY++ G G+FD P++ F
Sbjct: 12 TKVMLNLYDLTPANEYLYPIGFGLHHSGVEIGGTEYSFASGAGVFDSTPREAPGARF 68
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Match: A0A7S2FEI7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEI7_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.600e-13 Identity = 28/57 (49.12%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 1 AQVILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYGGGGGIFDHDPKKGEKVTF 171
++V+LNVYDL NE++ P GLG +H+G+++ GREYT+ GGGG+FD P++ F
Sbjct: 74 SRVLLNVYDLHDTNEYLEPFGLGLFHTGVQVGGREYTFAGGGGVFDMTPQEAPGAKF 130
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Match: A0A7S2WP56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WP56_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 6.310e-13 Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 4 QVILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYGGGGGIFDHDPKKGEKVTF 171
+V L+VYDL+ +NE++HP+G G YHSG++I +EYT+ GG GIFD PK+ F
Sbjct: 22 RVTLHVYDLSEVNEYMHPLGFGLYHSGIQIGDKEYTFAGGSGIFDMTPKEVPNARF 77
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Match: A0A7S1XRH3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRH3_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.330e-12 Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 7 VILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYGGGGGIFDHDPKKGEKVTF 171
V+L+VYDL+P N+++ VG+GAYHSGLE+ G EYT+ GIF H PK+ V
Sbjct: 19 VVLHVYDLSPANDFLGGVGIGAYHSGLEVAGEEYTFAAQAGIFTHGPKQAPGVRL 73
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Match: A0A812QVB6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812QVB6_9DINO) HSP 1 Score: 68.9 bits (167), Expect = 1.530e-12 Identity = 27/56 (48.21%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 4 QVILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYGGGGGIFDHDPKKGEKVTF 171
+VILNVYDL NE+++P+GLG YHSG+++ G+E+T+ G+F+H PK + F
Sbjct: 13 KVILNVYDLGNSNEYLYPIGLGTYHSGVQVHGKEWTFASQAGVFNHAPKGAQGAVF 68 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig93369.23345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig93369.23345.1 >prot_P-canaliculata_contig93369.23345.1 ID=prot_P-canaliculata_contig93369.23345.1|Name=mRNA_P-canaliculata_contig93369.23345.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=59bp AQVILNVYDLTPMNEWVHPVGLGAYHSGLEIEGREYTYGGGGGIFDHDPKback to top mRNA from alignment at P-canaliculata_contig93369:174..350- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig93369.23345.1 ID=mRNA_P-canaliculata_contig93369.23345.1|Name=mRNA_P-canaliculata_contig93369.23345.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=177bp|location=Sequence derived from alignment at P-canaliculata_contig93369:174..350- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig93369:174..350- >mRNA_P-canaliculata_contig93369.23345.1 ID=mRNA_P-canaliculata_contig93369.23345.1|Name=mRNA_P-canaliculata_contig93369.23345.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=354bp|location=Sequence derived from alignment at P-canaliculata_contig93369:174..350- (Pelvetia canaliculata dioecious)back to top |