mRNA_P-canaliculata_contig9238.23222.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig9238.23222.1
Unique NamemRNA_P-canaliculata_contig9238.23222.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
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BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Match: D8LHV0_ECTSI (Diacylglycerol kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV0_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 1.000e-110
Identity = 172/221 (77.83%), Postives = 195/221 (88.24%), Query Frame = 1 
Query:   37 EWVVKMQELLPRHQTSGEEGSDASKAVGGYTRKTRYATLTICEDKIPEDSCPLMVFVNSKSGGKQGGLLVSRFRELLNPLQVSDLSSEDPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGERPPLAILPLGTGNDLARVLGWGSGYAGEGLQALLDTIESAQVTMLDRWSVSVSTAGKGAFRKTQRSKDRQIMMNNYIGIGVDGQVALDFHKV 699
            EWVVKMQEL+P+ QTSGE G++A+  V  YTRKTR  TL+ICE+ IP+DSCPL+VFVNSKSGGKQGG+L+SRFR LLNPLQV DLS EDPLEVLQRFRNV NLR+L CGGDGTVAWLLQ+VDAI+W+ +RPPLAILPLGTGNDLARVLGWG GY GE ++ LLDTIE+AQVTMLDRWSVSV T  KG FRK Q  KDRQ++MNNY+GIGVDGQVALDFHK+
Sbjct:  100 EWVVKMQELVPKFQTSGE-GAEATTTVS-YTRKTRSVTLSICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAITWKVKRPPLAILPLGTGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKG-FRKGQ--KDRQLIMNNYLGIGVDGQVALDFHKM 315
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BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Match: A0A6H5LB27_9PHAE (Diacylglycerol kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB27_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 9.370e-106
Identity = 173/221 (78.28%), Postives = 195/221 (88.24%), Query Frame = 1 
Query:   37 EWVVKMQELLPRHQTSGEEGSDASKAVGGYTRKTRYATLTICEDKIPEDSCPLMVFVNSKSGGKQGGLLVSRFRELLNPLQVSDLSSEDPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGERPPLAILPLGTGNDLARVLGWGSGYAGEGLQALLDTIESAQVTMLDRWSVSVSTAGKGAFRKTQRSKDRQIMMNNYIGIGVDGQVALDFHKV 699
            EWVVKMQEL+P+ QTSGE G++A+  V  YTRKTR  TL+ICE+ IP+DSCPL+VFVNSKSGGKQGG+L+SRFR LLNPLQV DLS EDPLEVLQRFRNV NLR+L CGGDGTVAWLLQ+VDAISW+ +RPPLAILPLGTGNDLARVLGWG GY GE ++ LLDTIE+AQVTMLDRWSVSV T  KG FRK Q  KDRQ++MNNY+GIGVDGQVALDFHK+
Sbjct:  838 EWVVKMQELVPKFQTSGE-GAEATTTVS-YTRKTRSVTLSICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQSVDAISWKVKRPPLAILPLGTGNDLARVLGWGGGYTGEDVENLLDTIENAQVTMLDRWSVSVVTTSKG-FRKGQ--KDRQLIMNNYLGIGVDGQVALDFHKM 1053
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BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Match: C1DY32_MICCC (Diacylglycerol kinase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DY32_MICCC)

HSP 1 Score: 184 bits (466), Expect = 2.400e-52
Identity = 94/190 (49.47%), Postives = 128/190 (67.37%), Query Frame = 1 
Query:  130 RKTRYATLTICEDKI-PEDSCPLMVFVNSKSGGKQGGLLVSRFRELLNPLQVSDLSSEDPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGERPPLAILPLGTGNDLARVLGWGSGYAGEGLQALLDTIESAQVTMLDRWSVSVSTAGKGAFRKTQRSKDRQIMMNNYIGIGVDGQVALDFHK 696
            R   Y  +T  +  + PEDS PL+VFVNS+SGG+ GG L ++  + LNPLQV DL   DP   L++F ++  +RVLVCGGDGTVAW+LQA++A+     +PP+ ILPLGTGNDLARVLGWG G+A + +  LL  I+ A   +LDRW V+++    GA   + + K ++    NY+GIGVD Q AL FH+
Sbjct:    9 RNGEYTGITSIDPSLLPEDSIPLLVFVNSRSGGQLGGYLFNQLGKNLNPLQVVDLYKTDPKVALRQFCDLPRVRVLVCGGDGTVAWILQALEALEEIDPKPPVGILPLGTGNDLARVLGWGGGFANDLISELLMQIQEAHPAVLDRWEVNITPQDPGAPPPSPKKKPKE----NYLGIGVDAQAALRFHR 194
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BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Match: C1MQX9_MICPC (Diacylglycerol kinase n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MQX9_MICPC)

HSP 1 Score: 178 bits (452), Expect = 3.370e-50
Identity = 90/191 (47.12%), Postives = 122/191 (63.87%), Query Frame = 1 
Query:  142 YATLTICEDKIPEDSCPLMVFVNSKSGGKQGGLLVSRFRELLNPLQVSDLSSEDPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGERPPLAILPLGTGNDLARVLGWGSGYAGEGLQALLDTIESAQVTMLDRWSVSVSTAGKGA------FRKTQRSKDRQIMMNNYIGIGVDGQVALDFHK 696
            +  ++I    +P+D+ PL+VFVNS+SGG+ GG L S+ ++ LNPLQV DL   DP   L+ F N+  LR++VCGGDGTVAW+LQA++ +     +PP+ ILPLGTGNDLARVLGWG GY  + +  LL  I+ A   +LDRW V +  A           R+  R     ++  NY+GIGVD Q AL FH+
Sbjct:   15 HPIISIDPSFLPDDASPLLVFVNSRSGGQLGGYLTSQLKQNLNPLQVVDLHKTDPKFALRLFSNLPKLRIMVCGGDGTVAWILQALEELVEIDPKPPVGILPLGTGNDLARVLGWGGGYYNDLVSELLVQIQEAHPAVLDRWEVGIIPADPEGPPPSPKKRRRHRPGTETLVFQNYLGIGVDAQAALRFHR 205
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BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Match: A0A836CH11_9STRA (Diacylglycerol kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH11_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.040e-49
Identity = 95/188 (50.53%), Postives = 124/188 (65.96%), Query Frame = 1 
Query:  145 ATLTICEDKIPEDSCPLMVFVNSKSGG--KQGGLLVSRFRELLNPLQVSDLSSEDPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGERPPLAILPLGTGNDLARVLGWGSGYAG-EGLQALLDTIESAQVTMLDRWSVSVSTAGKGAFRKTQRSKDRQIMMNNYIGIGVDGQVALDFHKV 699
            A L I    I   + PL V VN++SG   +QG  L++  R  LNPLQV+DL +EDP + L+RF  VR+LRVL CGGDGTV W+L A+DA++W    PPLA+LP+GTGNDLAR LGWG GY G E L  LL+T+ ++    LDRWSV +        ++      + + M NY+GIGVDGQVAL+FH +
Sbjct:  389 ARLDIDPAAIARGAAPLAVLVNTRSGAGARQGRELLAALRGALNPLQVADLGAEDPADFLRRFARVRDLRVLCCGGDGTVGWVLHAIDAVAWDRGPPPLAVLPMGTGNDLARTLGWGPGYDGTEDLNQLLETVGASHKVKLDRWSVEIEPLKA---KRRGGGDSKSVPMGNYMGIGVDGQVALEFHNM 573
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BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Match: A0A7R9WAP9_9CHLO (Diacylglycerol kinase n=4 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7R9WAP9_9CHLO)

HSP 1 Score: 179 bits (455), Expect = 2.070e-49
Identity = 96/194 (49.48%), Postives = 126/194 (64.95%), Query Frame = 1 
Query:  151 LTICEDKIPEDSCPLMVFVNSKSGGKQGGLLVSRFRELLNPLQVSDLSSEDPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGERPPLAILPLGTGNDLARVLGWGSGYAGEGLQALLDTIESAQVTMLDRWSV------SVSTAGK-----GAFRKTQ-RSKDRQIMMNNYIGIGVDGQVALDFHK 696
            L++  + +PE + PL+VFVNS+SGG+ G  L+   R  LNPLQV DL +  P   L+ F NV N+RVLV GGDGTVAW+LQ +D +    ++PP+ ILPLGTGNDLARVLGWG GY+ E +  LL  I+ A   +LDRW V      S++T  K     G    TQ R + ++I+  NY+GIGVD Q AL FH+
Sbjct:  166 LSVDTESLPEGAQPLLVFVNSRSGGQMGNYLLEELRSNLNPLQVVDLHTTGPKAALKLFANVPNVRVLVAGGDGTVAWILQTIDELDM-AKKPPVGILPLGTGNDLARVLGWGGGYSNELISELLVQIQEAHPALLDRWQVDITPNESIATPNKLASAAGHTAPTQSRERKKEIVFQNYLGIGVDAQAALRFHQ 358
[Close]
BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Match: K3WM12_GLOUD (Diacylglycerol kinase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM12_GLOUD)

HSP 1 Score: 181 bits (459), Expect = 3.190e-49
Identity = 91/175 (52.00%), Postives = 127/175 (72.57%), Query Frame = 1 
Query:  175 PEDSCPLMVFVNSKSGGKQGGLLVSRFRELLNPLQVSDLSSEDPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGER-PPLAILPLGTGNDLARVLGWGSGYAGEGLQALLDTIESAQVTMLDRWSVSVSTAGKGAFRKTQRSKDRQIMMNNYIGIGVDGQVALDFHK 696
            P+DS PL+VF+NS+SGG+ G  ++ + R+ LNPLQV DLS + P+E L +F+++  LR+LVCGGDGTV W+L A+D I   G R PP+AILPLGTGNDLARVLGWGSG++   +  +L  I +A V++LDRW V++   GK           ++ ++NNY+G+GVD QVAL+FH+
Sbjct:  330 PKDSSPLLVFINSRSGGQMGLYVLRQIRKWLNPLQVYDLSHQTPIEPLLQFKDIPRLRILVCGGDGTVGWVLSALDEIG--GPRQPPIAILPLGTGNDLARVLGWGSGFSTRDVSDILTEIAAAHVSLLDRWQVNID--GK-----------KRAVLNNYLGVGVDAQVALEFHE 489
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BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Match: M4BQ15_HYAAE (Diacylglycerol kinase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQ15_HYAAE)

HSP 1 Score: 178 bits (451), Expect = 1.550e-48
Identity = 93/203 (45.81%), Postives = 132/203 (65.02%), Query Frame = 1 
Query:  112 AVGGYTRKTRYATLTICEDKIP-------EDSCPLMVFVNSKSGGKQGGLLVSRFRELLNPLQVSDLSSEDPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGERPPLAILPLGTGNDLARVLGWGSGY-AGEGLQALLDTIESAQVTMLDRWSVSVSTAGKGAFRKTQRSKDRQIMMNNYIGIGVDGQVALDFHK 696
            A+G        A+  +C D +P       ED+ PL+VFVNS+SGGK G  ++ + R+ LNP+QV DLS + P+E L+RF  +  LRVLVCGGDGTV W+L A+D I     +PP+AI+PLGTGNDLARVLGWG+G+ A   +  +L  +  A +++LDRW VS+               ++ +++NNY+G+GVD QVAL+FH+
Sbjct:  202 AIGWRCTSFAAASNVMCADGLPFELVETPEDTTPLLVFVNSRSGGKLGLHVLRQARKWLNPVQVYDLSHQSPIEPLRRFVGLPRLRVLVCGGDGTVGWVLSALDEIG-SARQPPIAIVPLGTGNDLARVLGWGAGFSAPTDMSDILSEVREAHISLLDRWKVSIGDL------------EKCVVLNNYMGVGVDAQVALEFHE 391
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BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Match: A0A5D6Y0E8_9STRA (Diacylglycerol kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0E8_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.780e-48
Identity = 86/174 (49.43%), Postives = 124/174 (71.26%), Query Frame = 1 
Query:  175 PEDSCPLMVFVNSKSGGKQGGLLVSRFRELLNPLQVSDLSSEDPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGERPPLAILPLGTGNDLARVLGWGSGYAGEGLQALLDTIESAQVTMLDRWSVSVSTAGKGAFRKTQRSKDRQIMMNNYIGIGVDGQVALDFHK 696
            P D+ PL+VF+NS+SGG+ G  ++ + R+ LNP+QV DLS E P+  L +F++   LR+LVCGGDGTV W+L A+DA+     +PP+AILPLGTGNDLARVLGWGSG++   +  +L  + +A V++LDRW V++   GK           ++ ++NNY+G+GVD QVAL+FH+
Sbjct:  329 PPDTTPLLVFINSRSGGQMGLYVLRQIRKWLNPIQVYDLSHESPMAPLLQFKDTPRLRILVCGGDGTVGWVLSALDALG-SARQPPIAILPLGTGNDLARVLGWGSGFSTRDVSEILSEVAAAHVSLLDRWQVTID--GK-----------KRAVLNNYLGVGVDAQVALEFHE 488
[Close]
BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Match: A0A090M7P7_OSTTA (Diacylglycerol kinase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M7P7_OSTTA)

HSP 1 Score: 176 bits (447), Expect = 3.520e-48
Identity = 94/195 (48.21%), Postives = 123/195 (63.08%), Query Frame = 1 
Query:  151 LTICEDKIPEDSCPLMVFVNSKSGGKQGGLLVSRFRELLNPLQVSDLSSEDPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGERPPLAILPLGTGNDLARVLGWGSGYAGEGLQALLDTIESAQVTMLDRWSVSV-------------STAGKGAFRKTQRSKDRQIMMNNYIGIGVDGQVALDFHK 696
            L++  + + ED+ PL+VFVNSKSGG+ G  L+   R  LNPLQV DL +  P   L+ F NV N+R+LV GGDGTVAW+LQ +D +    ++PP+ ILPLGTGNDLARVLGWG GY+ E +  LL  I  A    LDRW V +             S AG+ A ++    K ++I+  NY+GIGVD Q AL FH+
Sbjct:  175 LSVDVEVLAEDAAPLLVFVNSKSGGQMGPYLLEGLRSNLNPLQVVDLHNTGPRAALKLFANVPNVRILVAGGDGTVAWILQTLDELDV-AKKPPVGILPLGTGNDLARVLGWGGGYSNELISELLVQILEAHPVPLDRWQVEIALTDPVTSMNKLASAAGQPALKEGAPPKKKEIVFQNYLGIGVDAQAALLFHR 368
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9238.23222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHV0_ECTSI1.000e-11077.83Diacylglycerol kinase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5LB27_9PHAE9.370e-10678.28Diacylglycerol kinase n=1 Tax=Ectocarpus sp. CCAP ... [more]
C1DY32_MICCC2.400e-5249.47Diacylglycerol kinase n=1 Tax=Micromonas commoda (... [more]
C1MQX9_MICPC3.370e-5047.12Diacylglycerol kinase n=2 Tax=Micromonas pusilla T... [more]
A0A836CH11_9STRA1.040e-4950.53Diacylglycerol kinase n=1 Tax=Tribonema minus TaxI... [more]
A0A7R9WAP9_9CHLO2.070e-4949.48Diacylglycerol kinase n=4 Tax=Ostreococcus mediter... [more]
K3WM12_GLOUD3.190e-4952.00Diacylglycerol kinase n=1 Tax=Globisporangium ulti... [more]
M4BQ15_HYAAE1.550e-4845.81Diacylglycerol kinase n=1 Tax=Hyaloperonospora ara... [more]
A0A5D6Y0E8_9STRA1.780e-4849.43Diacylglycerol kinase n=1 Tax=Pythium brassicum Ta... [more]
A0A090M7P7_OSTTA3.520e-4848.21Diacylglycerol kinase n=2 Tax=Ostreococcus tauri T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9238contigP-canaliculata_contig9238:387..6497 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.0
Seed ortholog evalue2.1e-91
Seed eggNOG ortholog2880.D8LHV0
KEGG rclassRC00002,RC00017
KEGG koko:K00901
KEGG ReactionR02240
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231
GOsGO:0003674,GO:0003824,GO:0004143,GO:0005488,GO:0005509,GO:0006793,GO:0006796,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009611,GO:0009628,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0022622,GO:0032501,GO:0032502,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0048364,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0050896,GO:0099402
EggNOG free text desc.protein kinase C-activating G-protein coupled receptor signaling pathway
EggNOG OGsKOG1169@1,KOG1169@2759
EC2.7.1.107
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size702
Cds size702
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9238.23222.1prot_P-canaliculata_contig9238.23222.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig9238 387..6497 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817293.8325267-CDS-P-canaliculata_contig9238:386..5421622817293.8325267-CDS-P-canaliculata_contig9238:386..542Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9238 387..542 -
1693495204.6052542-CDS-P-canaliculata_contig9238:386..5421693495204.6052542-CDS-P-canaliculata_contig9238:386..542Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9238 387..542 -
1622817293.8484142-CDS-P-canaliculata_contig9238:1303..14561622817293.8484142-CDS-P-canaliculata_contig9238:1303..1456Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9238 1304..1456 -
1693495204.616462-CDS-P-canaliculata_contig9238:1303..14561693495204.616462-CDS-P-canaliculata_contig9238:1303..1456Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9238 1304..1456 -
1622817293.8588974-CDS-P-canaliculata_contig9238:2888..30021622817293.8588974-CDS-P-canaliculata_contig9238:2888..3002Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9238 2889..3002 -
1693495204.6255116-CDS-P-canaliculata_contig9238:2888..30021693495204.6255116-CDS-P-canaliculata_contig9238:2888..3002Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9238 2889..3002 -
1622817293.8692486-CDS-P-canaliculata_contig9238:5953..61491622817293.8692486-CDS-P-canaliculata_contig9238:5953..6149Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9238 5954..6149 -
1693495204.6436007-CDS-P-canaliculata_contig9238:5953..61491693495204.6436007-CDS-P-canaliculata_contig9238:5953..6149Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9238 5954..6149 -
1622817293.8834255-CDS-P-canaliculata_contig9238:6414..64971622817293.8834255-CDS-P-canaliculata_contig9238:6414..6497Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9238 6415..6497 -
1693495204.65808-CDS-P-canaliculata_contig9238:6414..64971693495204.65808-CDS-P-canaliculata_contig9238:6414..6497Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9238 6415..6497 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig9238.23222.1

>prot_P-canaliculata_contig9238.23222.1 ID=prot_P-canaliculata_contig9238.23222.1|Name=mRNA_P-canaliculata_contig9238.23222.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=234bp
QEEEEGKEDEEKEWVVKMQELLPRHQTSGEEGSDASKAVGGYTRKTRYAT
LTICEDKIPEDSCPLMVFVNSKSGGKQGGLLVSRFRELLNPLQVSDLSSE
DPLEVLQRFRNVRNLRVLVCGGDGTVAWLLQAVDAISWRGERPPLAILPL
GTGNDLARVLGWGSGYAGEGLQALLDTIESAQVTMLDRWSVSVSTAGKGA
FRKTQRSKDRQIMMNNYIGIGVDGQVALDFHKV*
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mRNA from alignment at P-canaliculata_contig9238:387..6497-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9238.23222.1 ID=mRNA_P-canaliculata_contig9238.23222.1|Name=mRNA_P-canaliculata_contig9238.23222.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=6111bp|location=Sequence derived from alignment at P-canaliculata_contig9238:387..6497- (Pelvetia canaliculata dioecious)
CAGGAAGAAGAGGAGGGGAAAGAAGATGAGGAGAAGGAATGGGTGGTGAA
GATGCAGGAGCTGCTCCCCAGACACCAGACCAGGTGATGCCGCCGTTGCC
CCGCCTTTCGCTTCCTTCCCACGTGAAAGGATCGAGCCGAGAGCAAACGG
GCTGTCCTGTCCCGTGCAATATCGTTCGCCCATCTAGCGCCCAATCCCTG
CCTTCTGAGGCTGAAATAGATCTGGCGCCGTCGATATCTTTATGTATACA
TATACAAATATGCCTTGGTGGGAACAGGACGTCCATTCCTGAGCGAGCTC
GTCCTCCGTTTTGTTATAGTCGTCGCTCGCCATTTACTGATGCTGCAGCG
GCGAAGAAGGCTCCGACGCGTCCAAAGCGGTCGGCGGCTACACTCGGAAG
ACGCGGTACGCGACGCTCACCATCTGCGAGGACAAGATTCCGGAGGACAG
CTGCCCCCTGATGGTGTTCGTGAACTCCAAGTCCGGGGGCAAGCAGGGTG
GTTTGCTCGTCAGCCGCTTCCGGGAGTTGCTGAACCCTCTTCAGGTATGT
CACACGGATGTGGAGGTGCTTGTGAAAACTAACATAACACTCCAGTTCGG
CCTGCTATCCGATCAAACACTCCACAAAGCGAGGGTGGCTCTTGCTGCAC
GATAACTATTACCAATATAAATAGTAGCGCTAATTGATCACCAGGTACTA
GAAGATTCCCCACCGAAATATTATATAGTGCGTTCAGCCACAGCGCAGAG
TCTTGAAGGGGAATATACGGATAAGACCGTGTTAAAGTTTTAGATTATTT
TTTACCGAGTATTTATTTGTTTTGTTTTGTTCTTTAAATCGAATACTCTA
TAAAGATAGCTCTACAGAACAAATGTCGGGCGAATGGACTAAATTTAACT
CTAAACGTAAAGAGGCACTTGAAAAGCCGGAAGTATCTATAGTCTAGTTT
ATGTACTGATGAAAGGTTTTGTTCTTGCAGCCTATGAAACAACAATTTGA
AATACATTTTACCCATACAACATTGTAACGCTCTTTGTTTTCTAAACTAT
AAAAACGGTTATAAGGTTCGATGGCACCATTATCGTACATTATTATTAAC
CCATTTAGTTATGTACTATTAACGTTTATGTTTTGTTTTGTCTGGTGTCC
CCGCATGGCCATTAACGTAAGTGTACAGTATAACGGTGGGTTTCTCCCCG
ATATTATATTGTTGACCCAATGTTATTACTATATACCATCGGGGAACCCG
TTATAATGCCATGAAGAGGTATTGTCGTTGCAGCCTATGATCCAGCCTAA
ACGCTTTGACATTTTTGCCCCTGACTAGGGGATGCTCAGAAGGTCTAGAT
GCGTTAGTTCAGAGTTTTCTTTAAAAGTACTGCCGGTCGCCCCGGTAGTT
CAGTTGGTAACCTCGAAACCTTCTGACGTTGGGACGTGAGTTCGAATCTC
GGCGCAGTCACACGACGTGGGGTGGAGAACGACTAATTCGTTGGTACACA
AAAGTCGACTTCACGGTCGACGAGGGAAAGGAATAGATGAATCCTTCTCG
CGAGAAAAATTAAGGTGAGCACCGCAGAAGGAATGTGGATAAAATCCTGT
GTGATCTTCCTCCTATGCGACCCCGGCTGGTACGTCCACACGCCTGACGC
CCAGAATAAATGGGATGACAACACACACACATATACACAAACACACAAAC
ACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACTGTAAGTGCTAATTAAAATTATATAT
AAACTGGAATTTAGAAGTTAAAATAACGACTTACAAAAAACACGCCAAAC
ACTGTTGAAACTTTCTTTTCAAAACAAAATATTTTATAACATTGGCTCCC
TGCTTACCTTCCTCGTTATTCCACATGAAACTCCATCACTATCCATATAT
GGAAACAAAAGGGGGTTCTTCCAGCAAGGCAATTGGTGAACTTTCAAAAA
TTTACACGGGGACGAGAGGAGGTCGACTGCTGTAGACGATAGGTTTACCA
AATTTTGGGTTGCCGGCTTGGGGACCGCATGGGGCACGTGATCGTTTTCT
GACAGCCGAGGATACAAAGTATACTGCATTTATTAATAGCCTCAATTTTA
AATTTGACTCAAGCAGAACTACGGTACATAACCATGGGGGACACTTGAAA
CTAGCCCTCCTCCAGAAATATAACTATTTTATCATCTTTCGCATGTTCCA
GCGTATTTGTAACCACTTTTCCACTGCGGATGAAAAATAATAATAGAGAG
GAAAGATATCCCACCGGAGTCGAATCTTATTCCGGGAAAAGGGAAAAAGA
CGAGGGTTTCCATGTGTATTACTGTTTGTAGGGTTTTTTAACCCCCTGAC
CCGGTCCGTTTTTTCGATACAAAAAGCTACACAAAACTTGCACCCGAGAA
CTGAAAGGGGCAATATCATGTATGTTTGTATGTCCGGTCAGCACTTTCAG
CAGAGTGTGAGCCAACCGGGAATGGTTATCGATCCTGGGGAAAAATATTT
TTTTGCCCTTTTCTCGTTCGCGCCTGAGAATTTGGTCTCGCGAGACGGGT
TCGGCCGTCCCGTCCCGCGCCAGCCCGCCTGCCTTCCCATTCTCCGCACT
AGGGCTTAACCTGTACAGTAATACGGATGGTTTACTACTGCTACTGCTCA
CCTCGTTTTCTCATGGGCCGTACTGAAGTGCCTCAGGCGCTGCGATTCGA
GCGTGAAAGGAAGGGTCTGCAGTTTTGTTGCTAGACTAGACGAGTCAGCG
CTGAGTGATCTAGCGGTCGCATTCATATTGCTTTAGACTAGGCGCTGCGA
TTCAAGCGTAAAAGGAAGGGGACTGGGGGTACACATCCCCGCATCCCCGC
AGTCTGTAATCTTGTTTCTAGACTAGACCAGTAAGCGCTGGCTGATCGAG
CGGTCGCACTCATATTGCATTCAGACTGTAGGAGTTACTCCGCGGGGTTC
AAACGTCCGGTAATTTCCGCTCCGAGGAGTTTTGCTCCCCTCGCCCACGC
TTCCTCTTTAGCTATAGACTGTTGCGATCAACGTATCTCGTTAAGTCCCC
CCCCCTCCAGCACCTTGTCGTAAACACCATGTCACACAGGTTTAGATAGG
GTCACATTACATGGGTCCCCATATGATTTTTTTCCGCCAGGACCAGAAAC
ACAATTTCTTCCTGCTGTTGTAGATCAATCAGTGCTCACTTTCTACACGT
ATAATTACGCGGGGCGTTTTTTCCTGCACGTGTTCTCAGGGTTGGGGGCA
AAGGTTTAGATAGGGTCATGTTGCGCAGGTCCCCATAAGATTTTTTCCCT
CCAGGACTAGAAACACACATTTTTCCTGCTGTTGTAGATCAATCAATGCT
CACTTTCTCCGTGTATACTTACGCGAAGCGTTTTTTTTTGCACGGGTTCC
CGGGGTTGGGGGGTGGGGTGGGGGTCGGTTGCTTGGGCGACATAGGTTTC
GGATCTCAGCTCAGAAGATCCCCTGGAAGTGCTGCAACGCTTCCGCAACG
TCCGGAACCTGAGGGTGCTGGTTTGTGGAGGAGACGGGACCGTGGCTTGG
CTGCTGCAGGTGAACCGGCGTGCGTCGTTATTGATCCGCACATTCCACGT
ATTGTCCTTATAGCTTTTCGTGCAACCGAAGAGCAACAGGTGGTGTAGTT
AGACACTGCTCAGTGAGATCAAGCACGAATCCCGCTTAGTCAGTCCTCCC
GAGAGGTAACGACGGGTCAACGGGTCACAAAAACTTGGGATTGGTGACCA
CCGCGGGAGGCGGGCAGAAGCCGTCCAGGATCCGAAATCGCGACATAATC
CTCACCGGGCCCAATCGCCTCCCTCGTCAACACTTCCTATTTATGATATT
CTTTTTCAACATCTGGGATCGTTCATCCTGGCTCGATCATGTGTGTCATG
TAATATTACTAGTTGATAGTGTGGTGACTATTATTATTACTATTACTATT
ACCGATACTAATACTAATACTATTACTTATACTACTACTACTACTAATAA
TACTAATACTAAAACTATTATTGCTATTACTTTTACTACAACTATTACTA
ATACCATTACTAAACTTGGGTGTGCGTAGCACCAGACTTGTTATTGTGGA
CCTTGTTCTAATCGACGTGCCGAAGTCGATCACCTCCCTTATTCATAGCC
CCGTTACTTTTCCAGCCCTCACTTTTGATCAAGTGATCGGAGAGAAAGGT
CAGGGAGGGTCCGCGTGTGGCGTCATATTAATAGATCCATCCCGCGAGGG
AGGTGGGGTGTACGACCATTACAATTTACCATTACAAATTACCATTACAA
TTTACCATTACAAACTACCATTACAAATTACCGTTATAAATTACCATTAC
AATTTACCATTACAAATTACCATTTCGATGTTTTTTTAAGGCGGGTCGAT
TCGTTCAAGTCTTAAGAGTAGATCAAATTGTTTGGACTTGCGCGGGTATA
TGGACGGATGACCCAGTGTTCAGCCCGGGTGTGGAGGACGAGCGATGGGC
TGACGCGGGACGGGGCGGCCAAACCTGTCTCGCAGAGCCCAAGTTCTTGG
GCGCGAACGGGGACAGGGGAAAAAAACTGTTCTCCCTGAAATTTCCCTGT
CCCATGTTTTTCTTTTTCAGCTGACCACAAGCAGGATTGACGACCATACA
CAGTATCCGGTTGATTTCCAGTCTACTGAAAGTGACGACCAATAACGAAA
GCAGGCTCCATGGAGCAAAGTAGTCTGAAGACGTACATGTTTGGGCGCTA
GCCAATCAGATGGCTCGATTCGGGGCTCAACCATATGATCCTCACGCATG
TGCCCATAAAATCATCGAGACCGGCCCGGGTATCCCCGATTATTTCGTTC
CCCCCAGAATTGAATAAAATATTTTGTGCAACCGACGAGGGTGTGACTGT
AAACCCTGCTCGTGCCCTTGAGCTGTTCTAATGTTAGATGTTAGATGTAA
CGTACATAATTTTGGATCTTGAATCTTTGAAAATCATCCAGGCCGTTGAC
GCCATATCTTGGAGGGGCGAACGGCCGCCGTTAGCGATCTTGCCTCTCGG
AACGGGAAACGATCTTGCTCGGGTGCTTGGGTGGGGCAGTGGATACGCCG
GGGAAGGCTTGCAAGCGTTGCTGGATACGATCGAGAGCGCTCAGGTGGGC
GGCGTTTCTTATCAGGTGTCGGCGCTGCCACCACATTAATCCCGAGGCAA
AGGCTCGGTGCCGAAAAACACCGGGAATTCCTCGCCCAGTAGCAGCCCGT
CTTGAAACACAGCGGTTCGTCAGGGTAGTCCGTCATTGCTCTCGAGGCTC
GAGCCTTGGCTCGCTCGCTGTCTCGCCGTTAGAGGCGTCTACATCAGTGT
TCTCGTGTGTACGTAGTGTATGGAAGTGTAGATTTTCGTACCGCATTGAT
TGTGTCGCCGTTCCGTCAATGAGGATGACAACCACCGTCGTGTCGGCCTT
CTGTCAAAGCTACGGCGGACGCCTCTGTGCTTTTTGTACGGCCCGCTCGG
TCGTCTGTGTGCGCTTTCGAGCAACGCCTCTGTATTTTTGTTGGGGAGGG
GGTCGTTGTATGTATTTTTGTGTAGACAGACTTTTGTATTTTTGTTCCTC
TTCGCAGCTCTTCCGTGAAGCACGGACAGCTGTATTTTGTCTCTCAAGAC
TAGCAAGAATATTAGTGTGATACTTGTAGAGGGTCTGCTTTCCCTCTCCT
TTGTCCCCTCGTTTGTCCTGTGTGTTGATTGGACGCCTCAAAAAGTTGAG
GCACGACCGGGGCCCAATCGGTTTGTGCGACGATCAGGCACACACACACA
TACACACACACACACACACACACACACGAGAAGGCCTCCGCTTTCGTCTC
AATCCTGGAAGAGTCTTGGATTAAACTTCGTTTTTATCCTCCCGCTTTGC
TGTAGGTGACCATGTTGGACCGTTGGTCCGTTTCGGTGAGCACCGCTGGC
AAGGGGGCGTTCCGCAAAACACAGAGGTCGAAGGATCGCCAGATTATGAT
GAACAACTACATCGGGATCGGGGTCGACGGCCAAGTCGCACTCGACTTCC
ACAAGGTTTGA
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Coding sequence (CDS) from alignment at P-canaliculata_contig9238:387..6497-

>mRNA_P-canaliculata_contig9238.23222.1 ID=mRNA_P-canaliculata_contig9238.23222.1|Name=mRNA_P-canaliculata_contig9238.23222.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1404bp|location=Sequence derived from alignment at P-canaliculata_contig9238:387..6497- (Pelvetia canaliculata dioecious)
CAGGAAGAAGAGGAGGGGAAAGAAGATGAGGAGAAGGAATGGGTGGTGAA
GATGCAGGAGCTGCTCCCCAGACACCAGACCAGCAGGAAGAAGAGGAGGG
GAAAGAAGATGAGGAGAAGGAATGGGTGGTGAAGATGCAGGAGCTGCTCC
CCAGACACCAGACCAGCGGCGAAGAAGGCTCCGACGCGTCCAAAGCGGTC
GGCGGCTACACTCGGAAGACGCGGTACGCGACGCTCACCATCTGCGAGGA
CAAGATTCCGGAGGACAGCTGCCCCCTGATGGTGTTCGTGAACTCCAAGT
CCGGGGGCAAGCAGGGTGGTTTGCTCGTCAGCCGCTTCCGGGAGTTGCTG
AACCCTCTTCAGCGGCGAAGAAGGCTCCGACGCGTCCAAAGCGGTCGGCG
GCTACACTCGGAAGACGCGGTACGCGACGCTCACCATCTGCGAGGACAAG
ATTCCGGAGGACAGCTGCCCCCTGATGGTGTTCGTGAACTCCAAGTCCGG
GGGCAAGCAGGGTGGTTTGCTCGTCAGCCGCTTCCGGGAGTTGCTGAACC
CTCTTCAGGTTTCGGATCTCAGCTCAGAAGATCCCCTGGAAGTGCTGCAA
CGCTTCCGCAACGTCCGGAACCTGAGGGTGCTGGTTTGTGGAGGAGACGG
GACCGTGGCTTGGCTGCTGCAGGTTTCGGATCTCAGCTCAGAAGATCCCC
TGGAAGTGCTGCAACGCTTCCGCAACGTCCGGAACCTGAGGGTGCTGGTT
TGTGGAGGAGACGGGACCGTGGCTTGGCTGCTGCAGGCCGTTGACGCCAT
ATCTTGGAGGGGCGAACGGCCGCCGTTAGCGATCTTGCCTCTCGGAACGG
GAAACGATCTTGCTCGGGTGCTTGGGTGGGGCAGTGGATACGCCGGGGAA
GGCTTGCAAGCGTTGCTGGATACGATCGAGAGCGCTCAGGCCGTTGACGC
CATATCTTGGAGGGGCGAACGGCCGCCGTTAGCGATCTTGCCTCTCGGAA
CGGGAAACGATCTTGCTCGGGTGCTTGGGTGGGGCAGTGGATACGCCGGG
GAAGGCTTGCAAGCGTTGCTGGATACGATCGAGAGCGCTCAGGTGACCAT
GTTGGACCGTTGGTCCGTTTCGGTGAGCACCGCTGGCAAGGGGGCGTTCC
GCAAAACACAGAGGTCGAAGGATCGCCAGATTATGATGAACAACTACATC
GGGATCGGGGTCGACGGCCAAGTCGCACTCGACTTCCACAAGGTTTGAGT
GACCATGTTGGACCGTTGGTCCGTTTCGGTGAGCACCGCTGGCAAGGGGG
CGTTCCGCAAAACACAGAGGTCGAAGGATCGCCAGATTATGATGAACAAC
TACATCGGGATCGGGGTCGACGGCCAAGTCGCACTCGACTTCCACAAGGT
TTGA
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