mRNA_P-canaliculata_contig9231.23214.1 (mRNA) Pelvetia canaliculata dioecious
|
Overview
Homology
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Match: D7G2J3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J3_ECTSI) HSP 1 Score: 362 bits (928), Expect = 8.710e-121 Identity = 186/291 (63.92%), Postives = 231/291 (79.38%), Query Frame = 1
Query: 1 GSGDSTLFLPAPDDRLLKTIKILHLSNLDLAEIFALFNKHDKAQHGYFTLATVYNLLGKRRTIFGDSFKYWHLSVLFFLLGKFVKCEPQNRGVQDFQKLIFSEWLHAVTTFCLFEEEEVLKFCFFILDREKNGYIDREDMRILVSMLHHVDPVKGVTRNTKMAFDKLSIQQDGKIEFWEFEIFNRAFPSLFFPAFRLRVKMMQAVLGERWWKIKKRQLQDEVDNKRRLEEKDRTAEANRLEAMRQRRIRRKMGKYNHYLWPCGREAYDEMFPKPEVRVVDP*QEKVERLQK 873
GS STL LPAPDDRLLK+IKIL LSN DLA++F LF K+D AQ G +LA VY +LG++++IFGDS LF L+G ++DFQ+L FSEWL A+TTFCLFEEEE+L+FCFFILDREKNGYI++++MR+LV+ML+++DPVKG T NTK+AFDKLS+QQDGKIEFWEFE+FN+AFPSLFFPAFRL+VKMMQAV GE WW KKR QD ++ +R+ EE+DR A+ANRLEAMRQRRI+RKMG ++ WPCGR YD+MFP+ V V DP ++ ERL+K
Sbjct: 2 GSSGSTL-LPAPDDRLLKSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMLGEKKSIFGDS--------LFELIG-----------IRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKDEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLFFPAFRLQVKMMQAVWGEAWWGRKKRNFQDRLELRRKHEEEDRLADANRLEAMRQRRIKRKMGACKYFCWPCGRAEYDKMFPRANVVVADPAADEAERLRK 272
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Match: A0A6H5L1H5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H5_9PHAE) HSP 1 Score: 352 bits (904), Expect = 2.040e-116 Identity = 195/351 (55.56%), Postives = 246/351 (70.09%), Query Frame = 1
Query: 1 GSGDSTLFLPAPDDRLLKTIKILHLSNLDLAEIFALFNKHDKAQHGYFTLATVYNLLGKRRTIFGDSFKYWHLSVLFFLLGKFVKCEPQNRGVQDFQKLIFSEWLHAVTTFCLFEEEEVLKFCFFILDREKNGYIDREDMRILVSMLHHVDPVKGVTRNTKMAFDKLSIQQDGKIEFWEFEIFNRAFPSLFFPAFRL------------RVKMMQAVLGERWWKIKKRQLQDEVDNKRRLEEKDRTAEANRLEAMRQRRIRRKMGKYNHYLWPCGREAYDEMFPKPEVRVVDP*QEKVERLQK---------------------------EAEARAELQRRTEARNMNPET 936
GS STL LPAPDDRLLK+IKIL LSN DLA++F LF K+D AQ G +LA VY ++G++++IFGDS L+ L+G ++DFQ+L FSEWL A+TTFCLFEEEE+L+FCFFILDREKNGYI++E+MR+LV+ML+++DPVKG T NTK+AFDKLS+QQDGKIEFWEFE+FN+AFPSL FPAFRL +VKMMQAV GE WW KKR++QD ++ +R+ EE+DR A+ANRLEAMRQRRI+ KMG ++ WPCGR YD+MFP+ V V DP ++ ERL+K +AE +A LQR EAR +N ET
Sbjct: 2 GSSGSTL-LPAPDDRLLKSIKILDLSNTDLAKVFRLFCKYDTAQRGCLSLANVYKMIGEKKSIFGDS--------LYELIG-----------IRDFQELTFSEWLDAITTFCLFEEEEILRFCFFILDREKNGYIEKEEMRMLVNMLYNIDPVKGPTGNTKVAFDKLSVQQDGKIEFWEFELFNKAFPSLLFPAFRLQSTNPPAALTQTKVKMMQAVWGEAWWGRKKRKVQDRLELRRKHEEEDRLADANRLEAMRQRRIKSKMGACKYFCWPCGRAEYDKMFPRTNVVVADPGADEAERLRKVLRMIPPEDVNMREDRKRGGPAYITPAQAEEKARLQREMEARYLNYET 332
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Match: A0A7S2C3E2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3E2_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.250e-57 Identity = 113/306 (36.93%), Postives = 181/306 (59.15%), Query Frame = 1
Query: 25 LPAPDDRLLKTIKILHLSNLDLAEIFALFNKHDKAQHGYFTLATVYNLLGKRRTIFGDSFKYWHLSVLFFLLGKFVKCEPQNRGVQDFQKLIFSEWLHAVTTFCLFEEEEVLKFCFFILDREKNGYIDREDMRILVSMLHHVDPVKGVTRNTKMAFDKLSIQQDGKIEFWEFEIFNRAFPSLFFPAFRLRVKMMQAVLGERWWKIKKRQLQDEVDNKRRLEEKDRTAEANRLEAMRQRRIRRKMGKYNHYLWPCGREAYDEMFPKPEVRVVDP*QEKV--ERLQKEAEARAELQRRTEARNMNPET 936
+P PD R LK +++ H++ +L ++ F DK G ++ Y ++R+IFGD+ + + + C L F E++HAV T+CLFE++E+L+FCF+I D++KNGYI++E++R +V++L+ + P + NTK+A D+L DGK++F EF+ FNR+FP+LF+PAFR++V M+ + G+ WW+ KKR LQDE D KR EE + E RL M+QR+IR+KMG ++ R+ Y+ +FP + D EK + ++ A+AR + + E NPET
Sbjct: 7 VPTPDSRTLKAMELGHINMKELGIFWSAFRSIDKKLTGSVDISDFYKFFEEKRSIFGDA------------IFELIDCNQSG-------SLDFGEFVHAVVTYCLFEQDEMLRFCFYIFDKDKNGYIEQEELRWMVNILYGLGPTDKLKGNTKVAVDRLDFNDDGKVDFKEFKEFNRSFPALFYPAFRIQVNMINLIAGDAWWEKKKRWLQDEKDRKRAREEYSKRKEKARLRKMQQRKIRKKMGYVRYFCCFLERKKYELLFP---IEDSDNKNEKTAAQLAEERAKAREKAKHLAELAIKNPET 290
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Match: A0A835ZCW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW1_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.670e-53 Identity = 116/318 (36.48%), Postives = 169/318 (53.14%), Query Frame = 1
Query: 7 GDSTLFLPAPDDRLLKTIKILHLSNLDLAEIFALFNKHDKAQHGYFTLATVYNLLGKRRTIFGDSFKYWHLSVLFFLLGKFVKCEPQNRGVQDFQKLIFSEWLHAVTTFCLFEEEEVLKFCFFILDREKNG------------------YIDREDMRILVSMLHHVDPVK---GVTRN---------------------------TKMAFDKLSIQQDGKIEFWEFEIFNRAFPSLFFPAFRLRVKMMQAVLGERWWKIKKRQLQDEVDNKRRLEEKDRTAEANRLEAMRQRRIRRKMGKYNHYLWPCGREAYDEMFP 816
G LP PDDR+ IK L L+N +LA+ F +F HD A+ G LAT Y ++G+R+++FGDS +F LLG V+D +++ F EWL A+ T+CLF+E +VLK+CF+ILDREK YI ++ ++L +L++VD + G TRN ++A +K+ +Q DGKIEFWE E+FN+AFPSL +PAFR++VKM Q V GE WW ++R L ++V ++ LE A+ R +R+RRK+G Y P + Y E+ P
Sbjct: 2 GGGISLLPEPDDRIANCIKALCLNNTELAQAFDIFQAHDTAKKGTIPLATFYKMIGERKSMFGDS--------IFDLLG-----------VRDTREIDFGEWLQAIVTYCLFDESDVLKYCFYILDREKQQLRKGAVGGAKADAFIKERYIVMDESKLLADLLYNVDCKRRPSGNTRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXRIALNKVPVQADGKIEFWELELFNKAFPSLLYPAFRMQVKMTQLVWGEDWWDRRRRMLNEDVATRKELERLALEADKKRRRKAYDQRVRRKLGVARFYCCPWAVDRYQELHP 300
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Match: A0A6S8V9R4_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8V9R4_9STRA) HSP 1 Score: 172 bits (436), Expect = 5.200e-47 Identity = 104/308 (33.77%), Postives = 172/308 (55.84%), Query Frame = 1
Query: 13 STLFLPAPDDRLLKTIKILHLSNLDLAEIFALFNKHDKAQHGYFTLATVYNLLGKRRTIFGDSFKYWHLSVLFFLLGKFVKCEPQNRGVQDFQKLIFSEWLHAVTTFCLFEEEEVLKFCFFILDREKNGYIDREDMRILVSMLHHVDPVKGVTRNTKMAFDKLSIQQDGKIEFWEFEIFNRAFPSLFFPAFRLRVKMMQAVLGERWWKIKKRQLQDEVDNKRRLEEKDRTAEANRLEAMRQRRIRRKMGKYNHYLWPCGREAYDEMFPKPEVRVVDP*QEKVERLQKEAEARAELQRRTEARNMNPET 936
+++ +P PD R LK ++ +++ +LA + F + DK G + Y L ++R+IFGD G F C+ + ++L F E+L AV T+CLFE +E+L+FCF+I DR+KNGYI +E++ +++ +L+H+ P + NT+ A + L D K+++ EF F+ FP+LF+PAFR++ M+ +G+RWW KKR L +E + +E+ E RL +R++RIR+KMG + P R A+ ++FP + + E ++QK A+ R +R E NPET
Sbjct: 3 ASMTVPNPDHRTLKVMEFINIGVKELAVFWRHFREGDKEMLGVIAIDQFYLLFHEKRSIFGD--------------GIFDLCD-----IHHTEELDFGEYLVAVITYCLFEPQEILRFCFYIFDRDKNGYIMKEELELMLRVLYHIVPPNDFSGNTRNALELLDFNDDEKVDWQEFNRFHVLFPALFYPAFRIQQTMITQTMGQRWWDKKKRYLHEEKVRRDMIEQLAARKEHARLLKLREKRIRKKMGLLRYMFCPAQRAAFRKLFPVDDAQAEKTLSEAELQVQK-AKQREVERRLRELNAKNPET 290
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Match: A0A2R5GWK3_9STRA (Calmodulin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWK3_9STRA) HSP 1 Score: 164 bits (416), Expect = 7.840e-44 Identity = 98/250 (39.20%), Postives = 140/250 (56.00%), Query Frame = 1
Query: 25 LPAPDDRLLKTIKILHLSNLDLAEIFALFNKHDKAQHGYFTLATVYNLLGKRRTIFGDSFKYWHLSVLFFLLGKFVKCEPQNRGVQDFQKLIFSEWLHAVTTFCLFEEEEVLKFCFFILDREKNGYIDREDMRILVSMLHHVDPVKGVTRNTKMAFDKLSIQQDGKIEFWEFEIFNRAFPSLFFPAFRLRVKMMQAVLGERWWKIKKRQLQDEVDNKRRLEEKDRTAEANRLEAMRQRRIRRKMGKYNHY 774
+P PDDRL KTI +L LS ++ + + +F K+D+ G + Y L+ + RT+FGDS LF L+ + C G D FSE++ + T+ LF ++LKFCFF+ D++KNGYID +++ LV MLH +P T N + A DGKI+F EF+ N FP L PAFR++ MM LGE+WW KK LQ+E + LEE+ R E R +QR++R KMG + +Y
Sbjct: 5 IPVPDDRLQKTIDMLKLSKKEINKFWRIFQKYDRDHGGTIDVEEFYRLIEEERTVFGDS--------LFELVD--IDCS----GTLD-----FSEFVQTIATYALFARVDILKFCFFVFDKDKNGYIDSDELHALVEMLHGNNP----TSNCRTALANFDTNSDGKIDFEEFQAMNVRFPQLLHPAFRMQQNMMINTLGEQWWNGKKLMLQEERNADNALEERLRLKELQRQHRNQQRQVRHKMGFFGYY 231
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Match: A0A8J2S6B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6B5_9STRA) HSP 1 Score: 157 bits (397), Expect = 7.280e-42 Identity = 95/273 (34.80%), Postives = 153/273 (56.04%), Query Frame = 1
Query: 28 PAPDDRLLKTIKILHLSNLDLAEIFALFNKHDKAQHGYFTLATVYN-LLGKRRTIFGDSFKYWHLSVLFFLLGKFVKCEPQNRGVQDFQKLIFSEWLHAVTTFCLFEEEEVLKFCFFILDREKNGYIDREDMRILVSMLHHVDPVKGVTRNTKMAFDKLSIQQDGKIEFWEFEIFNRAFPSLFFPAFRLRVKMMQAVLGERWWKIKKRQLQDEVDNKRRLEEKDRTAEANRLEAMRQRRIRRKMGKYNHYLWPCGREAYDEMFPKPE-VRVVD 840
P DDR+ K ++ +L D+ ++ +F KHDK + ++ Y+ ++ RTIF D LF L+ D + + F E++ AVTT+C FE EVLKFCFF+ DR+K G+I +E+MR+ V +H + ++ N + A D L ++DGK +F EF+ + +PS+ FPAFRL+ MMQA+ GE++W+ KK +L + +++R+ E E R+ ++RR MG +YL P R Y E++P P+ RV++
Sbjct: 14 PTADDRIAKAMQTFNLKEKDIRVLWHMFKKHDKERRSIIAISDFYDKIVFVPRTIFCDG--------LFDLIE-----------AADSESIDFGEFVAAVTTYCFFEIPEVLKFCFFVFDRDKKGFITQEEMRLFVDAMHGNE----MSTNVEFALDNLKYRKDGKFDFEEFKGMHHLYPSVLFPAFRLQNAMMQAMGGEQFWESKKLELSMQKEDERKREANREAREKAEAYKYREDQVRRHMGSIKYYLMPKNRAKYYEVYPLPKKYRVME 263
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Match: A0A7S2D7S8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D7S8_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.870e-39 Identity = 89/264 (33.71%), Postives = 144/264 (54.55%), Query Frame = 1
Query: 28 PAPDDRLLKTIKILHLSNLDLAEIFALFNKHDKAQHGYFTLATVYN-LLGKRRTIFGDSFKYWHLSVLFFLLGKFVKCEPQNRGVQDFQKLIFSEWLHAVTTFCLFEEEEVLKFCFFILDREKNGYIDREDMRILVSMLHHVDPVKGVTRNTKMAFDKLSIQQDGKIEFWEFEIFNRAFPSLFFPAFRLRVKMMQAVLGERWWKIKKRQLQDEVDNKRRLEEKDRTAEANRLEAMRQRRIRRKMGKYNHYLWPCGREAYDEMFP 816
P DDR+ + +++ L+ D+ + +F K D + G + ++ + R +FG++ +F L+ +D KL F E+L V T+C F+E E+L+FCFFI DREKNGYID+++++ V +LH+ V N + AF + Q DGK +F EF+ N+ FP++ +PAFR++ MM ++GE WW+ KK L + +++R + E N E RQ++IR MG +YL P R +DE +P
Sbjct: 6 PVADDRVQRAAEMVKLNVSDIKGFWNVFRKCDYDRIGIVATEDFFTKIVQEGRNMFGNA--------IFELID-----------AEDPDKLEFGEFLQGVVTYCCFDELEILQFCFFIFDREKNGYIDQDELKFFVDVLHNEQQVA----NVRTAFQSIKFQTDGKFDFPEFQKLNKDFPTVLYPAFRMQQNMMLNIMGEDWWRQKKLMLTLDKEDQRSAHARMMRREFNNRERTRQKQIRHDMGPVKYYLQPSKRSMFDEKYP 246
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Match: W4FPF5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPF5_9STRA) HSP 1 Score: 142 bits (358), Expect = 8.750e-36 Identity = 93/264 (35.23%), Postives = 135/264 (51.14%), Query Frame = 1
Query: 25 LPAPDDRLLKTIKILHLSNLDLAEIFALFNKHDK-----AQHGYFTLATVYNLLGKRRTIFGDSFKYWHLSVLFFLLGKFVKCEPQNRGVQDFQKLIFSEWLHAVTTFCLFEEEEVLKFCFFILDREKNGYIDREDMRILVSMLHHVDPVKGVTRNTKMAFDKLSIQQDGKIEFWEFEIFNRAFPSLFFPAFRLRVKMMQAVLGERWWKIKKRQLQDEVDNKRRLEEKDRTAEANRLEAMRQRRIRRKMGKYNHYLWPCGREAY 801
+PAPD+R+LKTI+ L L+ DL ++ F+K DK + G + + RT GD+ +F L+ + N G D FSE++ A+ FCL +E+LKFCFF+ D++KNG I+ ++ L+ MLH T N A +K DGK++F EF+I N+ FP+L +P +RL+ M +GE WW + L D D K E D A A R+R+ R+ MG +YL PC R AY
Sbjct: 7 IPAPDERMLKTIEKLQLNESDLRALYKRFSKSDKEVRRTSNSGSIDRTEFFRSFNEERTAVGDA--------VFALI------DIDNSGQLD-----FSEYVEALGAFCLLNTDEILKFCFFVFDQDKNGTIEGMELDALLEMLHS----DSATSNMAAAMEKFDFNGDGKVDFKEFQILNQQFPTLLYPVYRLQQSMKVHSMGESWWNRRATLLNDLKDLK---ENGDAAAIAASKAKDRRRKTRQNMGCLRYYLCPCRRSAY 244
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Match: A0A024TD15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TD15_9STRA) HSP 1 Score: 138 bits (347), Expect = 3.900e-34 Identity = 96/264 (36.36%), Postives = 141/264 (53.41%), Query Frame = 1
Query: 25 LPAPDDRLLKTIKILHLSNLDLAEIFALF-NKHDKAQHGYFTLATVYNLLGK-RRTIFGDSFKYWHLSV---LFFLLGKFVKCEPQNRGVQDFQKLIFSEWLHAVTTFCLFEEEEVLKFCFFILDREKNGYIDREDMRILVSMLHHVDPVKGVTRNTKMAFDKLSIQQDGKIEFWEFEIFNRAFPSLFFPAFRLRVKMMQAVLGERWWKIKKRQLQDEVDNKRRLEEKDRTAEANRLEAMRQRRIRRKMGKYNHYLWPCGREAY 801
+PAPD+R+LKTI+ L L+ DL ++ F N + Q G + ++ G RT F SF+ +V +F L+ + N G D FSE++ A+ FCL +EVLKFCFF+ D++KNG I+ ++ L+ MLH T N A DK DGK++F EF+I N+ FP+L +P +RL+ M +GE WW K+ L ++ + R E D TA A ++R+ R+ MG +YL PC R AY
Sbjct: 7 IPAPDERMLKTIEKLQLNESDLRTLYKRFSNSSPRFQRGLLMRSLDHSNSGSINRTEFFRSFREERTAVGDAVFALI------DIDNSGQLD-----FSEYVEALGAFCLLNTDEVLKFCFFVFDQDKNGTIEGMELDALLEMLH----ADNATSNMAAAMDKFDFNGDGKVDFREFQILNQQFPTLLYPVYRLQQSMKVHSMGEAWWN-KRATLLSQLKDLR--ENGDATALAAAKAKEQRRKTRQNMGCLRYYLCPCRRSAY 252 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9231.23214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9231.23214.1 >prot_P-canaliculata_contig9231.23214.1 ID=prot_P-canaliculata_contig9231.23214.1|Name=mRNA_P-canaliculata_contig9231.23214.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=143bp MRILVSMLHHVDPVKGVTRNTKMAFDKLSIQQDGKIEFWEFEIFNRAFPSback to top mRNA from alignment at P-canaliculata_contig9231:4106..6472- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig9231.23214.1 ID=mRNA_P-canaliculata_contig9231.23214.1|Name=mRNA_P-canaliculata_contig9231.23214.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2367bp|location=Sequence derived from alignment at P-canaliculata_contig9231:4106..6472- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9231:4106..6472- >mRNA_P-canaliculata_contig9231.23214.1 ID=mRNA_P-canaliculata_contig9231.23214.1|Name=mRNA_P-canaliculata_contig9231.23214.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=858bp|location=Sequence derived from alignment at P-canaliculata_contig9231:4106..6472- (Pelvetia canaliculata dioecious)back to top |