mRNA_P-canaliculata_contig9.22890.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig9.22890.1
Unique NamemRNA_P-canaliculata_contig9.22890.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Match: A0A6A6PI79_9PEZI (Probable electron transfer flavoprotein subunit alpha, mitochondrial (Fragment) n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PI79_9PEZI)

HSP 1 Score: 528 bits (1361), Expect = 3.250e-186
Identity = 279/352 (79.26%), Postives = 310/352 (88.07%), Query Frame = 1 
Query:   58 MAAPLRNTLLRPTQTTRCLRS--PLQPRRHLQPVPLQRLLSTLAVLEQRDGRLLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNAAYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPISDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGSATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFNRIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKIK 1107
            MA PLRNTLLR   T  CLR   P    R  +   LQRL S+LAVLEQRDG+L  SSLASISAAQKLGG+IHG VAGGNI  VA +AS+  GLEKV+++DN AYDRGLAENWAPLL ENIKKGGYTHVLAGHSAFGKNLLPRVAA+LDVQ ISDIT I+ EDTFVRPIYAGNA+LTVQ++D+PK++T+R TAF +G AEGGSA+TE GVDP+ ECPT+WVSE LAKS+RP+LA+A +VVSGGRGLKSKEEF+R+MPPLADA+GAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKD DAPIF VADVGLVGDLFD VPELTEK++
Sbjct:    1 MAPPLRNTLLRQANT--CLRQNRPTATARLTRTTFLQRLASSLAVLEQRDGKLNMSSLASISAAQKLGGSIHGFVAGGNIKAVADQASKIEGLEKVIFVDNDAYDRGLAENWAPLLVENIKKGGYTHVLAGHSAFGKNLLPRVAAMLDVQQISDITEIQGEDTFVRPIYAGNALLTVQSADNPKLLTVRGTAFPSGNAEGGSASTEEGVDPKAECPTEWVSESLAKSDRPDLASAEKVVSGGRGLKSKEEFDRLMPPLADAIGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDADAPIFQVADVGLVGDLFDKVPELTEKLQ 350
[Close]
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Match: M3ALE9_PSEFD (Probable electron transfer flavoprotein subunit alpha n=6 Tax=Mycosphaerellaceae TaxID=93133 RepID=M3ALE9_PSEFD)

HSP 1 Score: 524 bits (1349), Expect = 2.260e-184
Identity = 273/350 (78.00%), Postives = 302/350 (86.29%), Query Frame = 1 
Query:   58 MAAPLRNTLLRPTQTTRCLRSPLQPRRHLQPVPLQRLLSTLAVLEQRDGRLLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNAAYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPISDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGSATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFNRIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKIK 1107
            M APLRN LLR   T  C        R L    L+RL STLAVLEQRDG+L  SSLASISAA+K+GG+IHG VAG N+  VA EA++  GLEKV+Y++N AYD+GL ENWAPLL ENIKKGGYTHV+AGHSAFGKNL+PRV+ALLDVQ ISDIT I+ EDTFVRPIYAGNAILTVQT D PKI+T+R TAF AGAAEGGSA+ E G DP+ ECPT+WVSE LAKS+RP+LA+A RVVSGGRGLKSKEEF+R+MPPLADA+GAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIF VADVGLVGDLF+ VPELTEK+K
Sbjct:    1 MVAPLRNGLLRHAATCLCQSRSTPAIRPLSRDALRRLASTLAVLEQRDGKLNMSSLASISAAKKVGGSIHGFVAGSNVKTVADEAAKVEGLEKVIYVENGAYDKGLPENWAPLLVENIKKGGYTHVMAGHSAFGKNLMPRVSALLDVQQISDITDIQGEDTFVRPIYAGNAILTVQTEDSPKIVTVRGTAFPAGAAEGGSASVEEGTDPKAECPTEWVSEDLAKSDRPDLASAERVVSGGRGLKSKEEFDRLMPPLADALGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFQVADVGLVGDLFEKVPELTEKLK 350
[Close]
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Match: A0A150UTX0_9PEZI (Probable electron transfer flavoprotein subunit alpha n=1 Tax=Acidomyces richmondensis BFW TaxID=766039 RepID=A0A150UTX0_9PEZI)

HSP 1 Score: 523 bits (1346), Expect = 6.450e-184
Identity = 275/352 (78.12%), Postives = 306/352 (86.93%), Query Frame = 1 
Query:   58 MAAPLRNTLLRPTQTTRCLRSPLQPRRH--LQPVPLQRLLSTLAVLEQRDGRLLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNAAYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPISDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGSATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFNRIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKIK 1107
            M APLRN LLR  Q T CLR    P      +   + RLLSTLAVLEQRDG+L  SSLASISAA+KLGG++HG+VAG NI  VA EA++  GLEKV+++DNAAYD+GL EN+AP+L ENIKKG YTHVLAGHSAFGKNL+PRVAA+LDVQ ISDITAIE EDTFVRPIYAGNAILTVQ+ D PKIIT+R TAF AGAAEGGSAT E GVDP+ ECPT+WVSE LAKS+RP+LATA +VVSGGRGLKSKEEF R++PPLADA+GAAIGASRAAVDSGFADNSLQVGQTGKNVAP+LYLCAGISGAIQHLAGMKDSKVIA INKDPDAPIF VADVGLVGDLF+ VPELT+K+K
Sbjct:    1 MVAPLRNGLLR--QATTCLRQQSAPPASSLFRAAAIHRLLSTLAVLEQRDGKLNMSSLASISAAKKLGGSVHGLVAGSNIKSVADEAAKVEGLEKVIFVDNAAYDKGLPENYAPMLVENIKKGNYTHVLAGHSAFGKNLMPRVAAMLDVQQISDITAIEGEDTFVRPIYAGNAILTVQSEDTPKIITVRGTAFPAGAAEGGSATVEEGVDPKAECPTEWVSEDLAKSDRPDLATAEKVVSGGRGLKSKEEFERLIPPLADALGAAIGASRAAVDSGFADNSLQVGQTGKNVAPKLYLCAGISGAIQHLAGMKDSKVIACINKDPDAPIFQVADVGLVGDLFEKVPELTQKLK 350
[Close]
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Match: F9XLR4_ZYMTI (Probable electron transfer flavoprotein subunit alpha n=5 Tax=Zymoseptoria TaxID=1047167 RepID=F9XLR4_ZYMTI)

HSP 1 Score: 520 bits (1338), Expect = 1.030e-182
Identity = 271/349 (77.65%), Postives = 304/349 (87.11%), Query Frame = 1 
Query:   58 MAAPLRNTLLRPTQTTRCLRSPLQPRRHLQPVPLQRLLSTLAVLEQRDGRLLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNAAYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPISDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGSATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFNRIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKI 1104
            M APLR +LLR    T CLR      R L    LQRL STL VLEQRDG+L  SSLASISAAQK+GG++HGIVAG NI  VA +AS+  GLEKV++I+N  YDRGLAENWAP+L ENIKKGGYTHV+AGHSAFGKNL+PRVAAL+DVQ ISDIT ++SEDTFVRPIYAGNAILTVQ++D+PKI+T+R TAF +GAAEGGSA+ E G DP+  CPT+W+SE LAKS+RPELA+A +VVSGGRGLKSKEEF+RIMPPLADA+GAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKD DAPIF VADVGLVGDLF+ VPELTEK+
Sbjct:    1 MVAPLRTSLLRHAGAT-CLRQQRTTLRPLSRSTLQRLASTLTVLEQRDGKLNMSSLASISAAQKVGGSVHGIVAGSNIKTVAEQASKVEGLEKVIFIENGDYDRGLAENWAPMLIENIKKGGYTHVIAGHSAFGKNLMPRVAALMDVQQISDITEVQSEDTFVRPIYAGNAILTVQSNDNPKIVTVRGTAFPSGAAEGGSASVEEGTDPKAACPTEWISEDLAKSDRPELASAEKVVSGGRGLKSKEEFDRIMPPLADALGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDADAPIFQVADVGLVGDLFEKVPELTEKL 348
[Close]
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Match: UPI000CE1A78F (uncharacterized protein LOC111989932 n=2 Tax=Quercus suber TaxID=58331 RepID=UPI000CE1A78F)

HSP 1 Score: 519 bits (1336), Expect = 2.140e-182
Identity = 276/352 (78.41%), Postives = 307/352 (87.22%), Query Frame = 1 
Query:   58 MAAPLRNTLLRPTQTTRCLRSPLQPR--RHLQPVPLQRLLSTLAVLEQRDGRLLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNAAYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPISDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGSATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFNRIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKIK 1107
            MA PLR+ LLR  QT  CLR   Q    R  Q   LQRLLSTLAVLEQR+G+L  SSLASISAAQKLGG+IHG VAGGN+  VA EA++  GLEKV+++DN+AYD+GL ENWAPLL ENIKKGGYTHVLAGHSAFGKNL+PRVAALLDVQ ISDITAIE EDTFVRPIYAGNAILTVQ+ D+ K+IT+R TAF +GAAEGGSA+TE G DP+V+ PT+WVSE LA S+RP+L TA +VVSGGRGLKSKE+F+R+M PLADA+GAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKD DAPIF VADVGLVGDLF+ VPELTEK+K
Sbjct:    1 MALPLRSALLR--QTATCLRQHGQTAISRTSQNAALQRLLSTLAVLEQREGKLNMSSLASISAAQKLGGSIHGFVAGGNVKAVAEEAAKVEGLEKVIFVDNSAYDKGLPENWAPLLVENIKKGGYTHVLAGHSAFGKNLMPRVAALLDVQQISDITAIEGEDTFVRPIYAGNAILTVQSEDNVKLITVRGTAFPSGAAEGGSASTEEGADPKVDSPTEWVSEDLAVSDRPDLGTAEKVVSGGRGLKSKEDFDRVMTPLADALGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDADAPIFQVADVGLVGDLFEKVPELTEKLK 350
[Close]
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Match: N1Q117_DOTSN (Probable electron transfer flavoprotein subunit alpha n=2 Tax=Mycosphaerellaceae TaxID=93133 RepID=N1Q117_DOTSN)

HSP 1 Score: 516 bits (1328), Expect = 3.410e-181
Identity = 274/351 (78.06%), Postives = 304/351 (86.61%), Query Frame = 1 
Query:   58 MAAPLRNTLLRPTQTTRCLRSPLQ-PRRHLQPVPLQRLLSTLAVLEQRDGRLLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNAAYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPISDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGSATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFNRIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKIK 1107
            MAAPLRN LLR  Q   CLR     P R +    L+RL STLAVLEQR+G+L   SLASISAAQKLGG+IHG VAG NI  VA EA++  GLEKV+Y++NA Y++GL ENWAPLL ENIKKGGY+HV+AGHSAFGKNL+PRVAALLDVQ ISDIT +ESEDTFVRPIYAGNAILTVQ+SD  KIIT+R TAF AGAAEGGSA+ E G DP+ ECP +WVSE+LAKS+RP+LATA +VVSGGRGLKSKEEF++IMPPLADA+GAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKD DAPIF VADVGLVGDLF+ VPELTEK+ 
Sbjct:    1 MAAPLRNGLLR--QAATCLRQQQPTPVRQISRDALRRLASTLAVLEQREGKLNMGSLASISAAQKLGGSIHGFVAGANIKSVADEAAKIDGLEKVIYVENADYEKGLPENWAPLLVENIKKGGYSHVMAGHSAFGKNLMPRVAALLDVQQISDITEVESEDTFVRPIYAGNAILTVQSSDATKIITVRGTAFPAGAAEGGSASVEEGADPKAECPVEWVSENLAKSDRPDLATAEKVVSGGRGLKSKEEFDKIMPPLADALGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDADAPIFQVADVGLVGDLFEKVPELTEKLN 349
[Close]
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Match: A0A4U0TRP4_9PEZI (Probable electron transfer flavoprotein subunit alpha n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4U0TRP4_9PEZI)

HSP 1 Score: 516 bits (1328), Expect = 3.530e-181
Identity = 273/352 (77.56%), Postives = 307/352 (87.22%), Query Frame = 1 
Query:   58 MAAPLRNTLLRPTQTTRCLRS--PLQPRRHLQPVPLQRLLSTLAVLEQRDGRLLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNAAYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPISDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGSATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFNRIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKIK 1107
            MA PLR+ LLR    T CLR   P+   +  +   +QRLLSTLAVLEQRDG+L  SSLASISAAQKLGG+IHG VAG +I +VA +A++  GLEKV+Y+DNAAYD+GL EN+A LL ENIKKGGYTHVLAGHSAFGKNL+PR AAL+DV  ISDIT IESEDTFVRPIYAGNAILTVQ+ D PK+IT+R TAFAAGAAEGGSA  E GVDP+ EC T+WVSE+LAKS+RP+LATA +VVSGGRGLKSKEEF+R++PPLADA+GAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKD DAPIF VADVGLVGDLF+ VPE+TEK+K
Sbjct:    1 MAPPLRHGLLR--HATTCLRQSHPISAPKLSRHAAIQRLLSTLAVLEQRDGQLNMSSLASISAAQKLGGSIHGFVAGASIKQVAEQAAKVEGLEKVIYVDNAAYDKGLPENYAQLLVENIKKGGYTHVLAGHSAFGKNLMPRAAALMDVSQISDITGIESEDTFVRPIYAGNAILTVQSEDSPKMITVRGTAFAAGAAEGGSAGVEEGVDPKAECSTEWVSENLAKSDRPDLATAEKVVSGGRGLKSKEEFDRLIPPLADALGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDADAPIFQVADVGLVGDLFEKVPEMTEKVK 350
[Close]
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Match: A0A3M6W2U7_HORWE (Probable electron transfer flavoprotein subunit alpha n=7 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M6W2U7_HORWE)

HSP 1 Score: 516 bits (1329), Expect = 4.270e-181
Identity = 272/352 (77.27%), Postives = 306/352 (86.93%), Query Frame = 1 
Query:   58 MAAPLRNTLLRPTQTTRCLRS--PLQPRRHLQPVPLQRLLSTLAVLEQRDGRLLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNAAYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPISDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGSATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFNRIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKIK 1107
            M  PLR+ LLR  Q T CLR   P    R  +   +QRLLSTLAVLEQRDG+L  SSLASISAAQKLGG+IHG VAG N  +VA EA++  GLEKV+Y+DNAAYD+GL EN+APLL ENIKKGGYTH+LAGHSAFGKNL+PRV+ALLDVQ +SDIT IE EDTF+RPIYAGNAILTV+T+D PKIIT+R TAF A A EGGSA+ E GVDP+ EC T+WVSE LAK++RP+LATA +VVSGGRGLKSKEEF+R++PPLADA+GAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKD DAPIF VADVGLVGDLF++VPELTEK+K
Sbjct:   17 MVPPLRSGLLR--QATTCLRQNRPTPVPRVSRNAAIQRLLSTLAVLEQRDGKLNMSSLASISAAQKLGGSIHGFVAGANTKQVAEEAAKVQGLEKVIYVDNAAYDKGLPENYAPLLVENIKKGGYTHILAGHSAFGKNLMPRVSALLDVQQLSDITGIEGEDTFIRPIYAGNAILTVKTADSPKIITVRGTAFDASATEGGSASIEEGVDPKAECLTEWVSEDLAKTDRPDLATAEKVVSGGRGLKSKEEFDRLIPPLADALGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDADAPIFQVADVGLVGDLFELVPELTEKVK 366
[Close]
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Match: A0A3M7A8Q9_HORWE (Probable electron transfer flavoprotein subunit alpha n=9 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7A8Q9_HORWE)

HSP 1 Score: 514 bits (1325), Expect = 9.740e-181
Identity = 271/352 (76.99%), Postives = 306/352 (86.93%), Query Frame = 1 
Query:   58 MAAPLRNTLLRPTQTTRCLRS--PLQPRRHLQPVPLQRLLSTLAVLEQRDGRLLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNAAYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPISDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGSATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFNRIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKIK 1107
            M  PLR+ LLR  Q T CLR   P    R  +   +QRLLSTLAVLEQRDG+L  SSLASISAAQKLGG+IHG VAG N  +VA EA++  GLEKV+Y+DNAAYD+GL EN+APLL +NIKKGGYTH+LAGHSAFGKNL+PRV+ALLDVQ +SDIT IESEDTF+RPIYAGNAILTV+T+D PKIIT+R TAF A A EGGSA+ E GVDP+ EC T+WV E LAK++RP+LATA +VVSGGRGLKSKEEF+R++PPLADA+GAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKD DAPIF VADVGLVGDLF++VPELTEK+K
Sbjct:    1 MVPPLRSGLLR--QATTCLRQNRPTTVPRVSRNAAIQRLLSTLAVLEQRDGKLNMSSLASISAAQKLGGSIHGFVAGANTKQVAEEAAKVQGLEKVIYVDNAAYDKGLPENYAPLLVDNIKKGGYTHILAGHSAFGKNLMPRVSALLDVQQLSDITGIESEDTFIRPIYAGNAILTVKTADTPKIITVRGTAFDASATEGGSASIEEGVDPKAECLTEWVGEDLAKTDRPDLATAEKVVSGGRGLKSKEEFDRLIPPLADALGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDADAPIFQVADVGLVGDLFELVPELTEKVK 350
[Close]
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Match: A0A3M7F7P7_HORWE (Probable electron transfer flavoprotein subunit alpha, mitochondrial n=3 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7F7P7_HORWE)

HSP 1 Score: 518 bits (1333), Expect = 1.070e-180
Identity = 273/352 (77.56%), Postives = 307/352 (87.22%), Query Frame = 1 
Query:   58 MAAPLRNTLLRPTQTTRCLRS--PLQPRRHLQPVPLQRLLSTLAVLEQRDGRLLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNAAYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPISDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGSATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFNRIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKIK 1107
            M  PLR+ LLR  Q T CLR   P    R  +   +QRLLSTLAVLEQRDG+L  SSLASISAAQKLGGTIHG VAG N  +VA EA++  GLEKV+Y+DNAAYD+GL EN+APLL +NIKKGGYTH+LAGHSAFGKNL+PRV+ALLDVQ +SDIT IESEDTFVRPIYAGNAILTV+T+D PKI+T+R TAF A A EGGSA+ E GVDP+ EC T+WVSE LAK++RP+LATA +VVSGGRGLKSKEEF+R++PPLADA+GAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKD DAPIF VADVGLVGDLF++VPELTEK+K
Sbjct:   82 MVPPLRSGLLR--QATTCLRQNRPTPVPRVSRNAAIQRLLSTLAVLEQRDGKLNMSSLASISAAQKLGGTIHGFVAGANTKQVAEEAAKVQGLEKVIYVDNAAYDKGLPENYAPLLVDNIKKGGYTHILAGHSAFGKNLMPRVSALLDVQQLSDITGIESEDTFVRPIYAGNAILTVKTADSPKILTVRGTAFDASATEGGSASIEEGVDPKAECLTEWVSEDLAKTDRPDLATAEKVVSGGRGLKSKEEFDRLIPPLADALGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGISGAIQHLAGMKDSKVIAAINKDADAPIFQVADVGLVGDLFELVPELTEKVK 431
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9.22890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A6PI79_9PEZI3.250e-18679.26Probable electron transfer flavoprotein subunit al... [more]
M3ALE9_PSEFD2.260e-18478.00Probable electron transfer flavoprotein subunit al... [more]
A0A150UTX0_9PEZI6.450e-18478.13Probable electron transfer flavoprotein subunit al... [more]
F9XLR4_ZYMTI1.030e-18277.65Probable electron transfer flavoprotein subunit al... [more]
UPI000CE1A78F2.140e-18278.41uncharacterized protein LOC111989932 n=2 Tax=Querc... [more]
N1Q117_DOTSN3.410e-18178.06Probable electron transfer flavoprotein subunit al... [more]
A0A4U0TRP4_9PEZI3.530e-18177.56Probable electron transfer flavoprotein subunit al... [more]
A0A3M6W2U7_HORWE4.270e-18177.27Probable electron transfer flavoprotein subunit al... [more]
A0A3M7A8Q9_HORWE9.740e-18176.99Probable electron transfer flavoprotein subunit al... [more]
A0A3M7F7P7_HORWE1.070e-18077.56Probable electron transfer flavoprotein subunit al... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9contigP-canaliculata_contig9:8408..9573 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score527.7
Seed ortholog evalue4.1e-147
Seed eggNOG ortholog83344.XP_007923032.1
Preferred nameETF1
KEGG koko:K03522
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0022904,GO:0030258,GO:0031974,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070013,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575
EggNOG free text desc.Electron transfer flavoprotein domain
EggNOG OGs201C2@147541,38C7G@33154,3MGEH@451867,3NVHF@4751,3QKQU@4890,COG2025@1,KOG3954@2759
COG Functional cat.C
Best tax levelDothideomycetidae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionDHS-like NAD/FAD-binding domain
Ec32 orthologEc-18_002000.1
Exons1
Model size1166
Cds size1056
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9.22890.1prot_P-canaliculata_contig9.22890.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig9 8465..9520 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817270.0241687-UTR-P-canaliculata_contig9:8407..84641622817270.0241687-UTR-P-canaliculata_contig9:8407..8464Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9 8408..8464 +
1693495189.3785741-UTR-P-canaliculata_contig9:8407..84641693495189.3785741-UTR-P-canaliculata_contig9:8407..8464Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9 8408..8464 +
1622817270.049452-UTR-P-canaliculata_contig9:9520..95731622817270.049452-UTR-P-canaliculata_contig9:9520..9573Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9 9521..9573 +
1693495189.4034588-UTR-P-canaliculata_contig9:9520..95731693495189.4034588-UTR-P-canaliculata_contig9:9520..9573Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9 9521..9573 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817270.0372045-CDS-P-canaliculata_contig9:8464..95201622817270.0372045-CDS-P-canaliculata_contig9:8464..9520Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9 8465..9520 +
1693495189.3916416-CDS-P-canaliculata_contig9:8464..95201693495189.3916416-CDS-P-canaliculata_contig9:8464..9520Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9 8465..9520 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig9.22890.1

>prot_P-canaliculata_contig9.22890.1 ID=prot_P-canaliculata_contig9.22890.1|Name=mRNA_P-canaliculata_contig9.22890.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=352bp
MAAPLRNTLLRPTQTTRCLRSPLQPRRHLQPVPLQRLLSTLAVLEQRDGR
LLTSSLASISAAQKLGGTIHGIVAGGNIDRVAAEASRAAGLEKVLYIDNA
AYDRGLAENWAPLLAENIKKGGYTHVLAGHSAFGKNLLPRVAALLDVQPI
SDITAIESEDTFVRPIYAGNAILTVQTSDHPKIITIRATAFAAGAAEGGS
ATTEPGVDPQVECPTQWVSEHLAKSNRPELATASRVVSGGRGLKSKEEFN
RIMPPLADAMGAAIGASRAAVDSGFADNSLQVGQTGKNVAPQLYLCAGIS
GAIQHLAGMKDSKVIAAINKDPDAPIFHVADVGLVGDLFDIVPELTEKIK
I*
back to top

mRNA from alignment at P-canaliculata_contig9:8408..9573+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9.22890.1 ID=mRNA_P-canaliculata_contig9.22890.1|Name=mRNA_P-canaliculata_contig9.22890.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1166bp|location=Sequence derived from alignment at P-canaliculata_contig9:8408..9573+ (Pelvetia canaliculata dioecious)
ACAAGCAAACCCTTCCATCTTCACTTTGTGAACTCGACCTCACACGCTCT
TCACATCATGGCAGCCCCCTTACGCAATACTCTACTACGGCCCACGCAGA
CGACAAGATGCCTCCGTTCACCCCTCCAGCCGCGCCGCCATCTCCAGCCA
GTTCCACTCCAACGCCTCTTGTCCACGCTCGCAGTGCTAGAGCAACGAGA
CGGACGGCTCCTCACATCGTCGTTGGCCTCAATATCAGCAGCACAGAAGC
TGGGAGGAACAATCCACGGCATCGTGGCCGGCGGTAACATCGACCGTGTT
GCCGCCGAAGCCTCTCGAGCCGCGGGTCTAGAAAAGGTCCTTTACATCGA
CAACGCGGCCTATGACCGTGGACTCGCAGAAAACTGGGCTCCTTTACTGG
CCGAGAACATTAAAAAGGGTGGCTACACCCACGTCCTCGCCGGTCACTCC
GCATTCGGCAAGAACCTGCTTCCGCGCGTGGCCGCCCTGCTCGACGTTCA
GCCCATATCCGATATCACCGCCATAGAGTCCGAAGACACATTTGTGCGGC
CCATCTACGCTGGAAATGCCATTCTGACAGTCCAGACCTCCGACCATCCC
AAAATCATCACCATCCGGGCCACCGCATTCGCCGCCGGAGCTGCCGAGGG
AGGCTCTGCCACGACGGAGCCGGGCGTAGACCCTCAAGTAGAGTGCCCGA
CACAGTGGGTATCTGAGCATCTGGCCAAGTCAAATCGACCCGAACTCGCC
ACCGCGAGCCGGGTCGTCTCGGGCGGCCGCGGTCTCAAGTCGAAAGAGGA
ATTTAATCGGATCATGCCTCCCTTGGCGGACGCCATGGGCGCGGCCATTG
GAGCCAGTCGTGCCGCCGTCGATAGCGGCTTCGCCGACAATTCCCTCCAA
GTCGGACAGACGGGGAAGAATGTCGCTCCTCAATTGTACTTGTGTGCTGG
CATCTCCGGCGCCATTCAGCACCTCGCGGGCATGAAGGACAGCAAGGTCA
TTGCGGCTATCAACAAAGACCCCGACGCCCCCATCTTCCATGTGGCTGAT
GTGGGCTTAGTGGGTGATCTCTTCGACATCGTACCGGAGCTGACTGAGAA
GATCAAGATATGAACGTCGGTCTCGTGAGGTTGCGGACCTCAAGGCGACG
GCGACGCATACACCAC
back to top

Coding sequence (CDS) from alignment at P-canaliculata_contig9:8408..9573+

>mRNA_P-canaliculata_contig9.22890.1 ID=mRNA_P-canaliculata_contig9.22890.1|Name=mRNA_P-canaliculata_contig9.22890.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2112bp|location=Sequence derived from alignment at P-canaliculata_contig9:8408..9573+ (Pelvetia canaliculata dioecious)
ATGGCAGCCCCCTTACGCAATACTCTACTACGGCCCACGCAGACGACAAG
ATGCCTCCGTTCACCCCTCCAGCCGCGCCGCCATCTCCAGCCAGTTCCAC
TCCAACGCCTCTTGTCCACGCTCGCAGTGCTAGAGCAACGAGACGGACGG
CTCCTCACATCGTCGTTGGCCTCAATATCAGCAGCACAGAAGCTGGGAGG
AACAATCCACGGCATCGTGGCCGGCGGTAACATCGACCGTGTTGCCGCCG
AAGCCTCTCGAGCCGCGGGTCTAGAAAAGGTCCTTTACATCGACAACGCG
GCCTATGACCGTGGACTCGCAGAAAACTGGGCTCCTTTACTGGCCGAGAA
CATTAAAAAGGGTGGCTACACCCACGTCCTCGCCGGTCACTCCGCATTCG
GCAAGAACCTGCTTCCGCGCGTGGCCGCCCTGCTCGACGTTCAGCCCATA
TCCGATATCACCGCCATAGAGTCCGAAGACACATTTGTGCGGCCCATCTA
CGCTGGAAATGCCATTCTGACAGTCCAGACCTCCGACCATCCCAAAATCA
TCACCATCCGGGCCACCGCATTCGCCGCCGGAGCTGCCGAGGGAGGCTCT
GCCACGACGGAGCCGGGCGTAGACCCTCAAGTAGAGTGCCCGACACAGTG
GGTATCTGAGCATCTGGCCAAGTCAAATCGACCCGAACTCGCCACCGCGA
GCCGGGTCGTCTCGGGCGGCCGCGGTCTCAAGTCGAAAGAGGAATTTAAT
CGGATCATGCCTCCCTTGGCGGACGCCATGGGCGCGGCCATTGGAGCCAG
TCGTGCCGCCGTCGATAGCGGCTTCGCCGACAATTCCCTCCAAGTCGGAC
AGACGGGGAAGAATGTCGCTCCTCAATTGTACTTGTGTGCTGGCATCTCC
GGCGCCATTCAGCACCTCGCGGGCATGAAGGACAGCAAGGTCATTGCGGC
TATCAACAAAGACCCCGACGCCCCCATCTTCCATGTGGCTGATGTGGGCT
TAGTGGGTGATCTCTTCGACATCGTACCGGAGCTGACTGAGAAGATCAAG
ATATGAATGGCAGCCCCCTTACGCAATACTCTACTACGGCCCACGCAGAC
GACAAGATGCCTCCGTTCACCCCTCCAGCCGCGCCGCCATCTCCAGCCAG
TTCCACTCCAACGCCTCTTGTCCACGCTCGCAGTGCTAGAGCAACGAGAC
GGACGGCTCCTCACATCGTCGTTGGCCTCAATATCAGCAGCACAGAAGCT
GGGAGGAACAATCCACGGCATCGTGGCCGGCGGTAACATCGACCGTGTTG
CCGCCGAAGCCTCTCGAGCCGCGGGTCTAGAAAAGGTCCTTTACATCGAC
AACGCGGCCTATGACCGTGGACTCGCAGAAAACTGGGCTCCTTTACTGGC
CGAGAACATTAAAAAGGGTGGCTACACCCACGTCCTCGCCGGTCACTCCG
CATTCGGCAAGAACCTGCTTCCGCGCGTGGCCGCCCTGCTCGACGTTCAG
CCCATATCCGATATCACCGCCATAGAGTCCGAAGACACATTTGTGCGGCC
CATCTACGCTGGAAATGCCATTCTGACAGTCCAGACCTCCGACCATCCCA
AAATCATCACCATCCGGGCCACCGCATTCGCCGCCGGAGCTGCCGAGGGA
GGCTCTGCCACGACGGAGCCGGGCGTAGACCCTCAAGTAGAGTGCCCGAC
ACAGTGGGTATCTGAGCATCTGGCCAAGTCAAATCGACCCGAACTCGCCA
CCGCGAGCCGGGTCGTCTCGGGCGGCCGCGGTCTCAAGTCGAAAGAGGAA
TTTAATCGGATCATGCCTCCCTTGGCGGACGCCATGGGCGCGGCCATTGG
AGCCAGTCGTGCCGCCGTCGATAGCGGCTTCGCCGACAATTCCCTCCAAG
TCGGACAGACGGGGAAGAATGTCGCTCCTCAATTGTACTTGTGTGCTGGC
ATCTCCGGCGCCATTCAGCACCTCGCGGGCATGAAGGACAGCAAGGTCAT
TGCGGCTATCAACAAAGACCCCGACGCCCCCATCTTCCATGTGGCTGATG
TGGGCTTAGTGGGTGATCTCTTCGACATCGTACCGGAGCTGACTGAGAAG
ATCAAGATATGA
back to top