mRNA_P-canaliculata_contig10711.940.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Match: D7FUU4_ECTSI (AMMECR1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU4_ECTSI) HSP 1 Score: 274 bits (700), Expect = 3.930e-91 Identity = 130/161 (80.75%), Postives = 146/161 (90.68%), Query Frame = 1
Query: 1 DVIIAHFNDIEPSPPAFSTSNVCGMFVTWDKHEQGVQNLRGCIGTLTPMSISSLKDYTYSSALNDRRFSPIEASELDALDVSVSLLLKYEPARHWEDWEVGVHGIVINFNDDRGSSYSATFLPEVAAEQGWSRRVTLTRLVRKAGYKRTVDAAFLSRVQVT 483
DVIIAHFN+IEP PP+FST VCGMFVTWDKHE G ++LRGCIGTL P +IS L+DYTYSSALNDRRF+PIE EL +LDVSVSLL+KYEPA+HWEDWE+GVHGIVI F+DDRGSSYSATFLPEVAAEQGWSR+VTL+RLVRKAGYKR VD AFL+ V+VT
Sbjct: 61 DVIIAHFNNIEPPPPSFSTRYVCGMFVTWDKHEHGTESLRGCIGTLHPQAISQLRDYTYSSALNDRRFAPIEMPELASLDVSVSLLVKYEPAQHWEDWEIGVHGIVIKFDDDRGSSYSATFLPEVAAEQGWSRKVTLSRLVRKAGYKRVVDRAFLAGVEVT 221
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Match: A0A6V1N2W4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N2W4_HETAK) HSP 1 Score: 189 bits (481), Expect = 2.550e-58 Identity = 94/162 (58.02%), Postives = 114/162 (70.37%), Query Frame = 1
Query: 1 DVIIAHFNDIEPSPPAFSTSNVCGMFVTWDKHEQGVQN-LRGCIGTLTPMSISSLKDYTYSSALNDRRFSPIEASELDALDVSVSLLLKYEPARHWEDWEVGVHGIVINFNDDRGSSYSATFLPEVAAEQGWSRRVTLTRLVRKAGYKRTVDAAFLSRVQVT 483
DV+I F+ EPS P F T C FVTW+K E+G Q LRGCIGTL+P ++ LKDYT+SSA DRRF P+ +EL AL V+VSLL++YEPA W DWEVGVHGI+INF R YSAT+LPEVA EQGW ++ LVRKAGY+ VD A L ++VT
Sbjct: 29 DVLICAFDGTEPSDPRFPTDFECPFFVTWNKTERGGQRRLRGCIGTLSPRPVADLKDYTHSSAFRDRRFEPVGRAELGALQVAVSLLVRYEPAADWRDWEVGVHGILINFYSSRNEHYSATYLPEVAPEQGWGHLEAVSSLVRKAGYRGRVDDALLDSLEVT 190
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Match: K3XBM3_GLOUD (AMMECR1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBM3_GLOUD) HSP 1 Score: 173 bits (439), Expect = 3.640e-52 Identity = 80/161 (49.69%), Postives = 110/161 (68.32%), Query Frame = 1
Query: 1 DVIIAHFNDIEPSPPAFSTSNVCGMFVTWDKHEQGVQNLRGCIGTLTPMSISSLKDYTYSSALNDRRFSPIEASELDALDVSVSLLLKYEPARHWEDWEVGVHGIVINFNDDRGSSYSATFLPEVAAEQGWSRRVTLTRLVRKAGYKRTVDAAFLSRVQVT 483
D + AHF+ + P+F +FVTW+ Q +LRGCIGTL P + +L+D+T+ SAL DRRF PI EL L SVSLL+ YE A H+EDWE+G+HGI+I F D G+ YSAT+LP+VA+EQGWS +T L++KAG++R+V A L +++VT
Sbjct: 12 DTLHAHFDGSDEPVPSFDVDEQFPLFVTWEIERQHGTDLRGCIGTLAPTRLENLRDFTFKSALKDRRFDPIHPQELHRLHCSVSLLIDYEDAEHYEDWEIGIHGIIIEFEDSNGNYYSATYLPDVASEQGWSHLEAVTSLMKKAGFRRSVSPAMLQKLKVT 172
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Match: W2PU13_PHYPN (AMMECR1 domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2PU13_PHYPN) HSP 1 Score: 171 bits (434), Expect = 2.150e-51 Identity = 83/161 (51.55%), Postives = 107/161 (66.46%), Query Frame = 1
Query: 1 DVIIAHFNDIEPSPPAFSTSNVCGMFVTWDKHEQGVQNLRGCIGTLTPMSISSLKDYTYSSALNDRRFSPIEASELDALDVSVSLLLKYEPARHWEDWEVGVHGIVINFNDDRGSSYSATFLPEVAAEQGWSRRVTLTRLVRKAGYKRTVDAAFLSRVQVT 483
D + +HF P F +FVTW+ E G +LRGCIGTLTP + +L+D+T SAL D RF PIE EL L SVSLLL Y+ A ++DWE+G HGI+INFND RG+ +SAT+LP+VA EQGW+ T+T L+RKAGY+R+V L V+VT
Sbjct: 12 DTLQSHFEQGAEPTPRFDVHQEYPLFVTWEIEEYGGTHLRGCIGTLTPTRLRNLRDFTLKSALRDHRFDPIEPQELQRLHCSVSLLLDYKGAESYDDWEIGTHGIIINFNDSRGNEFSATYLPQVAREQGWNHVETVTSLMRKAGYRRSVSEDMLKTVKVT 172
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Match: G4ZQS7_PHYSP (AMMECR1 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZQS7_PHYSP) HSP 1 Score: 169 bits (429), Expect = 1.230e-50 Identity = 81/161 (50.31%), Postives = 109/161 (67.70%), Query Frame = 1
Query: 1 DVIIAHFNDIEPSPPAFSTSNVCGMFVTWDKHEQGVQNLRGCIGTLTPMSISSLKDYTYSSALNDRRFSPIEASELDALDVSVSLLLKYEPARHWEDWEVGVHGIVINFNDDRGSSYSATFLPEVAAEQGWSRRVTLTRLVRKAGYKRTVDAAFLSRVQVT 483
D + +HF+ P F +FVTW+ EQG +LRGCIGTL P + +L+D+T+ SAL DRRF PI EL L SVSLL+ Y+ A ++DWE+G HGI+I+F+D RG+ YSAT+LP+VA EQGW+ T+T L+RKAGY+R+V L V+VT
Sbjct: 12 DTLQSHFDGGAEPTPRFDVLQEYPLFVTWEIEEQGGTHLRGCIGTLAPTRLRNLRDFTFKSALRDRRFDPIGPQELHRLHCSVSLLIDYQDAESFDDWEIGTHGIIIDFSDSRGNEYSATYLPQVAREQGWTHTETVTSLMRKAGYRRSVTQDMLKTVKVT 172
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Match: A0A3M6V7T6_9STRA (AMMECR1 domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6V7T6_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.750e-50 Identity = 83/162 (51.23%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 1 DVIIAHFND-IEPSPPAFSTSNVCGMFVTWDKHEQGVQNLRGCIGTLTPMSISSLKDYTYSSALNDRRFSPIEASELDALDVSVSLLLKYEPARHWEDWEVGVHGIVINFNDDRGSSYSATFLPEVAAEQGWSRRVTLTRLVRKAGYKRTVDAAFLSRVQVT 483
D + +HFND +EP+P F +FVTW+ E G +LRGCIGTL P + +L+D+T+ SAL DRRF PI EL L SVSLL+ Y+ A+ ++DWE+G HGI+I F+D RG YSAT+LP+VA EQ W+ T+T L+RKAGY+R+V A L + VT
Sbjct: 12 DTLQSHFNDDVEPTP-FFDVQQEYPLFVTWEIEEHGGIHLRGCIGTLAPTRLRNLRDFTFKSALRDRRFGPIGPQELQRLHCSVSLLIDYQDAKSYDDWEIGTHGIIIEFSDLRGKEYSATYLPQVAREQDWTHVETVTSLMRKAGYRRSVTEAMLKTISVT 172
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Match: A0A329SQP7_9STRA (AMMECR1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SQP7_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.750e-50 Identity = 81/161 (50.31%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 1 DVIIAHFNDIEPSPPAFSTSNVCGMFVTWDKHEQGVQNLRGCIGTLTPMSISSLKDYTYSSALNDRRFSPIEASELDALDVSVSLLLKYEPARHWEDWEVGVHGIVINFNDDRGSSYSATFLPEVAAEQGWSRRVTLTRLVRKAGYKRTVDAAFLSRVQVT 483
D + +HF+ P F +FVTW+ E G +LRGCIGTL+P + +L+D+T+ SAL D RF PI EL L SVSLL+ YE A ++DWE+G HGI+I F+D RG+ YSAT+LP+VA EQGW+ T+T L+RKAGY+R+V A L V+VT
Sbjct: 12 DTLQSHFDGGTEPTPRFDVHQEYPLFVTWEIEEHGGTHLRGCIGTLSPTRLRNLRDFTFKSALRDHRFDPIGPQELHRLHCSVSLLIDYEDAESYDDWEIGTHGIIIEFSDSRGNDYSATYLPQVAREQGWTHVETVTSLMRKAGYRRSVSEAMLRTVKVT 172
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Match: A0A5D6XM79_9STRA (AMMECR1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM79_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.330e-50 Identity = 83/161 (51.55%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 1 DVIIAHFNDIEPSPPAFSTSNVCGMFVTWDKHEQGVQNLRGCIGTLTPMSISSLKDYTYSSALNDRRFSPIEASELDALDVSVSLLLKYEPARHWEDWEVGVHGIVINFNDDRGSSYSATFLPEVAAEQGWSRRVTLTRLVRKAGYKRTVDAAFLSRVQVT 483
D + AHF+ PAF T +FVTW+ Q +LRGCIGTL P + +L+D+T+ SAL D RF PI EL L SVSLL+ YE A H+EDWE+GVHGI+I F+D G YSAT+LP+VA+EQGWS +T L++KAGY+R V A L+ ++VT
Sbjct: 12 DTLHAHFDGGSEPVPAFDTRPKFPLFVTWEIERQHGVDLRGCIGTLAPTKLQNLRDFTFKSALKDHRFEPIAPHELQRLHCSVSLLVDYEDADHYEDWEIGVHGIIIEFSDANGGFYSATYLPDVASEQGWSHLDAVTSLMKKAGYRRKVTPAVLNALKVT 172
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Match: A0A3F2REZ7_9STRA (AMMECR1 domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2REZ7_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.510e-50 Identity = 81/161 (50.31%), Postives = 107/161 (66.46%), Query Frame = 1
Query: 1 DVIIAHFNDIEPSPPAFSTSNVCGMFVTWDKHEQGVQNLRGCIGTLTPMSISSLKDYTYSSALNDRRFSPIEASELDALDVSVSLLLKYEPARHWEDWEVGVHGIVINFNDDRGSSYSATFLPEVAAEQGWSRRVTLTRLVRKAGYKRTVDAAFLSRVQVT 483
D + +HF+ P F +FVTW+ +QG +LRGCIGTL P + +L+D+T+ SAL D RF PI E+ L SVSLL+ YE A ++DWE+G HGI+I F D RGSSY+AT+LP+VA EQGW T+T L+RKAGY+R+V LS V+VT
Sbjct: 12 DTLQSHFDGGTEPTPRFDIHQEFPLFVTWEIEKQGATHLRGCIGTLAPTRLRNLRDFTFKSALRDHRFDPIGPQEIQHLHCSVSLLIDYEDADGYDDWEIGTHGIIIEFKDSRGSSYNATYLPQVAREQGWDHIETVTSLMRKAGYRRSVSEDMLSSVKVT 172
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Match: A0A0P1API7_PLAHL (Uncharacterized conserved protein, AMMECR1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1API7_PLAHL) HSP 1 Score: 167 bits (424), Expect = 7.060e-50 Identity = 81/161 (50.31%), Postives = 107/161 (66.46%), Query Frame = 1
Query: 1 DVIIAHFNDIEPSPPAFSTSNVCGMFVTWDKHEQGVQNLRGCIGTLTPMSISSLKDYTYSSALNDRRFSPIEASELDALDVSVSLLLKYEPARHWEDWEVGVHGIVINFNDDRGSSYSATFLPEVAAEQGWSRRVTLTRLVRKAGYKRTVDAAFLSRVQVT 483
D + +HFN P F +FVTW+ EQG LRGCIGTL P + +L+D+T+ SAL+DRRF PI EL+ L SVSLL+ Y A+ ++DW +G HGI+I FND G++YSAT+LP+VA EQGW+ T+T L+RKAGY+ TV L V+VT
Sbjct: 12 DTLQSHFNGSTEPKPFFDVQQEYPLFVTWEVEEQGRIQLRGCIGTLAPTRLQNLRDFTFKSALHDRRFDPIGPQELNRLLCSVSLLIDYNDAKSYDDWVIGTHGIIIKFNDSDGNTYSATYLPQVAREQGWTHVETITSLMRKAGYRCTVSEDMLKTVKVT 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10711.940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10711.940.1 >prot_P-canaliculata_contig10711.940.1 ID=prot_P-canaliculata_contig10711.940.1|Name=mRNA_P-canaliculata_contig10711.940.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=161bp DVIIAHFNDIEPSPPAFSTSNVCGMFVTWDKHEQGVQNLRGCIGTLTPMSback to top mRNA from alignment at P-canaliculata_contig10711:1300..3419+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10711.940.1 ID=mRNA_P-canaliculata_contig10711.940.1|Name=mRNA_P-canaliculata_contig10711.940.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2120bp|location=Sequence derived from alignment at P-canaliculata_contig10711:1300..3419+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10711:1300..3419+ >mRNA_P-canaliculata_contig10711.940.1 ID=mRNA_P-canaliculata_contig10711.940.1|Name=mRNA_P-canaliculata_contig10711.940.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=966bp|location=Sequence derived from alignment at P-canaliculata_contig10711:1300..3419+ (Pelvetia canaliculata dioecious)back to top |