mRNA_P-canaliculata_contig10665.889.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Match: A0A6H5JPG9_9PHAE (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPG9_9PHAE) HSP 1 Score: 195 bits (496), Expect = 1.060e-60 Identity = 110/147 (74.83%), Postives = 117/147 (79.59%), Query Frame = 1
Query: 25 MDKSSTLLTGLPTPVFWYGLVVGQEFSMPAADPAQLLLKDNATACVAQKNGGPALYKIRLVRVGPAKKGGMRTVSFTVGGAVQNVEVKDSIAGNDFDGPMAAAGEPLQASWPFVGSPMPGVVEKVLLGVGDSVSEGEVVAVVSAMKM 465
MDKSSTLLT LPTPVFWYGLVVGQEFS+ A+PA LLLKD G K+RL RVGPAKKGGMRTVSFTVGGAVQNVEVKDS++GNDFDGPMA AG L+ VGSPMPGVVEKVL+ VG SVSEGEVVAVVSAMKM
Sbjct: 1 MDKSSTLLTSLPTPVFWYGLVVGQEFSICPANPADLLLKDG------DGGDGSTEVKVRLERVGPAKKGGMRTVSFTVGGAVQNVEVKDSVSGNDFDGPMAGAGNALE-----VGSPMPGVVEKVLVEVGSSVSEGEVVAVVSAMKM 136
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Match: D8LM14_ECTSI (Acetyl-CoA carboxytransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM14_ECTSI) HSP 1 Score: 205 bits (521), Expect = 1.080e-57 Identity = 117/157 (74.52%), Postives = 125/157 (79.62%), Query Frame = 1
Query: 1 VFDDYVSMMDKSSTLLTGLPTPVFWYGLVVGQEFSMPAADPAQLLLKDNATACVAQKNGGPALYKIRLVRVGPAKKGGMRTVSFTVGGAVQNVEVKDSIAGNDFDGPMAAAGEPLQASWPFVGSPMPGVVEKVLLGVGDSVSEGEVVAVVSAMKMEV 471
VFDDYV+ MDKSSTLLT LPTPVFWYGLVVGQEFS+ A+PA LL KD G KIRL RVGPAKKGGMRTVSFTVGGAVQNVE+KDS++GNDFDGPMA AG L+ VGSPMPGVVEKVL+ VG SVSEGEVVAVVSAMKMEV
Sbjct: 1059 VFDDYVNEMDKSSTLLTSLPTPVFWYGLVVGQEFSICPANPADLL-KDG------DDGDGATEVKIRLERVGPAKKGGMRTVSFTVGGAVQNVEIKDSVSGNDFDGPMAGAGNALE-----VGSPMPGVVEKVLVEVGSSVSEGEVVAVVSAMKMEV 1203
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Match: A0A7S3Y4I5_HETAK (Acetyl-CoA carboxytransferase n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3Y4I5_HETAK) HSP 1 Score: 121 bits (303), Expect = 2.120e-28 Identity = 76/187 (40.64%), Postives = 109/187 (58.29%), Query Frame = 1
Query: 1 VFDDYVSMMDKSSTLLTGLPTPVFWYGLVVGQ--EFSMPAADPAQLLLKDNATACVAQKNGGPALYKIRLVRVGPAKKGGMRTVSFTVGGAVQNVEVKDSIAGNDFDGPMAAAGEPLQASWPFVGSPMPGVVEKVLLGVGDSVSEGEVVAVVSAMKMEVQVKATSAGTVASLAVEEGGKVVEGALIL 555
VF DY+ ++K S +T L TPVFWYG+ +G EFS+PA+ ++ + V + G K+ L RV +KG +RTV F V G Q+V + D ++F GPMA + + +GSPMPG VEK+++ GD V G+ +AVV AMKMEV VKA G + + +G KV+EGAL++
Sbjct: 1154 VFSDYMDFINKYSPYITNLETPVFWYGMEIGDVTEFSIPASAAEEMNIP------VFETIDGMVPVKMTLKRVTGLQKGYVRTVIFDVNGREQHVNIVDKPESDEFSGPMAK-----KDNEKHIGSPMPGQVEKMVVAKGDEVKAGDTLAVVGAMKMEVTVKAPHDGKIKKIVTGKGAKVIEGALMI 1329
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Match: A0A7S4DC20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC20_HETAK) HSP 1 Score: 118 bits (296), Expect = 1.520e-27 Identity = 77/186 (41.40%), Postives = 102/186 (54.84%), Query Frame = 1
Query: 1 VFDDYVSMMDKSSTLLTGLPTPVFWYGLVVGQEFSMPAADPAQLLLKDNATACVAQKNGGPALYKIRLVRVGPAKKG-GMRTVSFTVGGAVQNVEVKDSIAGNDFDGPMAAAGEPLQASWPFVGSPMPGVVEKVLLGVGDSVSEGEVVAVVSAMKMEVQVKATSAGTVASLAVEEGGKVVEGALIL 555
VF DY K ST+ T L TPVFWYG+ VG + + + ++ G L K+ L RV P G RTV F V G Q+V ++ A + F GPMA A ++ +GSPMPG VEKV + GD V EG+ +AVVSAMKMEV+VKA G + + E G KV++GAL++
Sbjct: 484 VFADYKEFTQKYSTVTTNLETPVFWYGMDVGDVTELTVS---RAKAEEMRVPIPEDYMGDEVLVKVTLKRVTPITGDKGARTVIFDVNGVEQHVTIETHKADDTFSGPMADA-----SNRKHIGSPMPGAVEKVCVAAGDDVVEGQTIAVVSAMKMEVEVKAPGRGKIKRIVTETGSKVIDGALMI 661
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Match: A0A7S3NKJ5_9STRA (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKJ5_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.580e-23 Identity = 69/187 (36.90%), Postives = 102/187 (54.55%), Query Frame = 1
Query: 1 VFDDYVSMMDKSSTLLTGLPTPVFWYGLVVGQEFSMPAADPAQLLLKDNATACVAQKNGGPALYKIRLVRVGPAKKGGMRTVSFTVGGAVQNVEVKDSIAGNDFDGPMAAAGEPLQASWPFVGSPMPGVVEKVLLGVGDSVSEGEVVAVVSAMKMEVQVKATSAGTVASLAVEEGGKVVEGALILTL 561
VFDDY++ ++ LPTP+FWY +GQ ++ P+++ K+ + +++ + L RVGP K G MRT+ F V Q+VEVK+ A +FDGPMA P SPMPG+V+K + VG SV G+ + +VSA+KMEV+V+A G K+VEGAL+ +
Sbjct: 1084 VFDDYMNFCATNTAAAAFLPTPIFWYSFSIGQTATISKL-PSEIAQKELGSTLESEE------ITLTLKRVGPLKAGRMRTIVFQVNDKEQHVEVKNPAAEGEFDGPMADTSNPNHLP-----SPMPGMVDKCHIEVGQSVVAGQELFIVSALKMEVKVRAPRDGXXXXXXXXARDKLVEGALMAVI 1258
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Match: A0A0G4GPU4_9ALVE (Lipoyl-binding domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GPU4_9ALVE) HSP 1 Score: 99.4 bits (246), Expect = 3.470e-21 Identity = 78/200 (39.00%), Postives = 109/200 (54.50%), Query Frame = 1
Query: 1 VFDDYVSMMDKSSTLLTGLPTPVFWYGLVVGQEFSMPAADPAQLLLKDNATACVAQKNGGP---ALYKIRLVRVGPAKKGGMRTV-----SFTVGGAV----QNVEVKDSIAGNDFDGPMAAAGEPLQASWPFVGSPMPGVVEKVLLGVGDSVSEGEVVAVVSAMKMEVQVKATSAGTVASLAVEE-GGKVVEGALILTL 561
VF DY+ +LT +P+ ++YG+ G+ FS A P LL + A + GP + LVRVGP +K RTV S T GA Q+V VKD+ +DGPMA + + + SPMPG V ++L D+V G+++AV+SAMKMEV+V A GT+ S++V G KVVEGAL++TL
Sbjct: 208 VFADYIKKQMSGRRMLTHVPSAEYFYGMAPGEHFSFSA--PVSLLKEVFVDPSKASEGMGPEESVEVTVSLVRVGPLQKS-HRTVEIKLTSKTKAGATVTEKQSVSVKDTAGVFHYDGPMANPAKKTDQEYE-IASPMPGQVIELLAHTDDAVKAGDILAVISAMKMEVKVSAPRDGTIKSISVAHVGAKVVEGALLVTL 403
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Match: UPI001272D032 (pyruvate carboxylase n=1 Tax=Desulfuromonas sp. AOP6 TaxID=1566351 RepID=UPI001272D032) HSP 1 Score: 80.5 bits (197), Expect = 3.150e-14 Identity = 59/171 (34.50%), Postives = 87/171 (50.88%), Query Frame = 1
Query: 55 LPTPVFWYGLVVGQEFSMPAADPAQLLLKDNATACVAQKNGGPALYKIRLVRVGPAKKGGMRTVSFTVGGAVQNVEVKD-SIAGNDFDGPMAAAGEPLQASWPFVGSPMPGVVEKVLLGVGDSVSEGEVVAVVSAMKMEVQVKATSAGTVASLAVEEGGKVVEGALILTLK 564
LPTPVF+YGL VG E S+ L++K NA +G ++ G R++ F + G + V VKD SI + A +P Q +G+PMPG + K+L+ GD V+ G+ + AMKME VKA G VA + +EG +V +G L++ L+
Sbjct: 1003 LPTPVFFYGLGVGDETSIDIEPGKTLIVKLNA--------------------IGRVQEDGTRSIYFELNGEPRQVTVKDLSIETGEVSHKKADPDDPKQ-----IGAPMPGKIFKILVNAGDEVAAGDTLLSTEAMKMETNVKAKKDGVVAEVCFKEGEQVQQGDLLIVLE 1148
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Match: A0A1F9Q4X9_9DELT (Pyruvate carboxylase n=5 Tax=Desulfuromonadales TaxID=69541 RepID=A0A1F9Q4X9_9DELT) HSP 1 Score: 80.1 bits (196), Expect = 4.280e-14 Identity = 64/173 (36.99%), Postives = 90/173 (52.02%), Query Frame = 1
Query: 55 LPTPVFWYGLVVGQEFSMPAADPAQLLLKDNATACVAQKNGGPALYKIRLVRVGPAKKGGMRTVSFTVGGAVQNVEVKD-SIAGNDFDGPMA---AAGEPLQASWPFVGSPMPGVVEKVLLGVGDSVSEGEVVAVVSAMKMEVQVKATSAGTVASLAVEEGGKVVEGALILTL 561
LPTPVF+YGL VG E S+ +P + L+ ++L VG +K G R + F + G + V V D S+ ++ G A +GE +G+PMPG V K+L+ VGD+V G+ + AMKME VKA G V L V+EG +V +GAL+L L
Sbjct: 1005 LPTPVFFYGLEVGDETSIDI-EPGKTLI-------------------VQLNAVGSLQKDGTRNIYFELNGEPRQVTVADLSVKRDEAAGRKADPDKSGE--------IGAPMPGKVFKLLVNVGDTVKAGDTLLSTEAMKMETNVKAKEDGKVVELLVKEGQQVQQGALLLVL 1149
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Match: A0A2N6ELK2_9DELT (Pyruvate carboxylase n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6ELK2_9DELT) HSP 1 Score: 77.8 bits (190), Expect = 2.690e-13 Identity = 62/188 (32.98%), Postives = 92/188 (48.94%), Query Frame = 1
Query: 1 VFDDYVSMMDKSSTLLTGLPTPVFWYGLVVGQEFSMPAADPAQLLLKDNATACVAQKNGGPALYKIRLVRVGPAKKGGMRTVSFTVGGAVQNVEVKDSIAGNDFDGPMAAAGEPLQASWPFVGSPMPGVVEKVLLGVGDSVSEGEVVAVVSAMKMEVQVKATSAGTVASLAVEEGGKVVEGALILTLK 564
VF+++ + S + LPTPVF+YGL VG E S+ L++K NA VG G R + F + G + V VKD +D A+ + A+ VG+PMPG + K+L+ VG+ V+ G+ + AMKME VKA G V + EGG+V +G L++ L+
Sbjct: 989 VFEEFARHRQEYSDT-SFLPTPVFFYGLDVGDEVSIDIEAGKTLIIKLNA--------------------VGRVHDDGTRNIYFELNGEPRVVTVKDLSVESD----EASHEKADPANTKHVGAPMPGKIFKMLVSVGEKVAAGDTLLTTEAMKMETNVKAKVDGVVGEIRFNEGGQVEQGDLLVVLE 1151
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Match: A0A2J6J6S8_9DELT (Pyruvate carboxylase n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2J6J6S8_9DELT) HSP 1 Score: 77.8 bits (190), Expect = 2.690e-13 Identity = 62/188 (32.98%), Postives = 91/188 (48.40%), Query Frame = 1
Query: 1 VFDDYVSMMDKSSTLLTGLPTPVFWYGLVVGQEFSMPAADPAQLLLKDNATACVAQKNGGPALYKIRLVRVGPAKKGGMRTVSFTVGGAVQNVEVKDSIAGNDFDGPMAAAGEPLQASWPFVGSPMPGVVEKVLLGVGDSVSEGEVVAVVSAMKMEVQVKATSAGTVASLAVEEGGKVVEGALILTLK 564
V ++++ K S + LPTPVF+YGL VG E S+ L++K NA +G + G R + F + G + V V+D + +G A +P VG+PMPG + K+ + VGD V EG+ + AMKME VKA G V + V EG +V + L+LTL+
Sbjct: 1001 VLEEFIRHRQKYSDT-SFLPTPVFFYGLDVGDEVSIEIQAGKTLIVKLNA--------------------IGRVHEDGTRNIYFELNGEPRQVTVQDMSV--ELEGSSAVKADPDDQKQ--VGAPMPGKIFKMNVAVGDKVKEGDTLLSTEAMKMETNVKAKKDGIVKEILVNEGDQVGQDDLLLTLE 1163 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10665.889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10665.889.1 >prot_P-canaliculata_contig10665.889.1 ID=prot_P-canaliculata_contig10665.889.1|Name=mRNA_P-canaliculata_contig10665.889.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=183bp MMDKSSTLLTGLPTPVFWYGLVVGQEFSMPAADPAQLLLKDNATACVAQKback to top mRNA from alignment at P-canaliculata_contig10665:7101..9646+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10665.889.1 ID=mRNA_P-canaliculata_contig10665.889.1|Name=mRNA_P-canaliculata_contig10665.889.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2546bp|location=Sequence derived from alignment at P-canaliculata_contig10665:7101..9646+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10665:7101..9646+ >mRNA_P-canaliculata_contig10665.889.1 ID=mRNA_P-canaliculata_contig10665.889.1|Name=mRNA_P-canaliculata_contig10665.889.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at P-canaliculata_contig10665:7101..9646+ (Pelvetia canaliculata dioecious)back to top |