mRNA_P-canaliculata_contig10665.888.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig10665.888.1
Unique NamemRNA_P-canaliculata_contig10665.888.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Match: D8LM14_ECTSI (Acetyl-CoA carboxytransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM14_ECTSI)

HSP 1 Score: 948 bits (2451), Expect = 0.000e+0
Identity = 478/548 (87.23%), Postives = 507/548 (92.52%), Query Frame = 1
Query:    7 YERFRALGSFDSLSREERDAAVEVASGASKPRSKPPRVSTTPCKLAVFLAEQVIHGERAAHKGRAPPGMTTTPPVPSLSSPPGSAEVSDLETAKSVLDAKGPEAMATWVRQKKRVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVCYRFLHEDPWERLRKIRAAAPNICLQFVRLAAKNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQTSSIFSVEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSDITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALSPADFAGVKSALAEGKCGKVLGDVTEELVISYLLYPK 1650
            +E F  +  FDSL+ EER +AV  A+ ASKPRS+P R ST P KLA FLAEQ IHGER+AHKGRAP GMTTTPP      P  +A     ETAKSVLDAKGPEAMA WVRQK+ VMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDV YRFL+EDPWERLR+IRAAAPNICLQFVRLAAKNG+DVFRVFDCFNDVEQMRVCI+AVR+AGKVAEVCVCYTSDLQTSSIF+V+YYKGVAKSAAEAGAHMIGIKDMAGLLKPR+APLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGS++ PEGTGYLGLEPYDVYWSRVRDMY+PFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWE VLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVV LLEGRLGFPH+GFP+EVSKA+LG+KKPLTTRPSAAL PADFA VK+ L EGKCG+VLG+VT+ELV+S LLYPK
Sbjct:  515 HEHFPIMAGFDSLAPEERSSAVSAAAAASKPRSRPARPSTKPSKLATFLAEQAIHGERSAHKGRAPQGMTTTPPAIPDVKPTEAAG----ETAKSVLDAKGPEAMAAWVRQKRGVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVTYRFLNEDPWERLRQIRAAAPNICLQFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVCVCYTSDLQTSSIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPEGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEVSKAVLGDKKPLTTRPSAALPPADFAAVKAKLREGKCGQVLGEVTDELVVSSLLYPK 1058          
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Match: A0A7S3Y4I5_HETAK (Acetyl-CoA carboxytransferase n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3Y4I5_HETAK)

HSP 1 Score: 670 bits (1729), Expect = 1.070e-225
Identity = 336/549 (61.20%), Postives = 418/549 (76.14%), Query Frame = 1
Query:    1 QRYERFRALGSFDSLSREERDAAVEVASGASKPRSKPPRVSTTPCKLAVFLAEQVIHGERAAHKGRAPPGMTTTPPV-PSLSSPPGSAEVSDLETAKSVLDAKGPEAMATWVRQKKRVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVCYRFLHEDPWERLRKIRAAAPNICLQ---------------------FVRLAAKNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQTSSIFSVEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSDITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALSPADFAGVKSALAE 1581
            QRYE+FR +G +  LS EE+ A ++ A+     + +  +V TTP K+A ++AE+ I G+R+  +G AP G+    PV P+++  P S E     TAK +LD++GPEA+A WV+ +KRV++TDTTMRDAHQSLLATRVR+ DL++GAKLA+ L+G+AFS EMWGGATFDV YRFL+EDPWERLRKIR AAP++CLQ                     F++LAA+NG+DVFR+FDCFND++QM+V ID VRE GKVAEVC+CYT D+ TS +++VEYYK + + A +AGAH+IGIKDMAGL KP AA  LVEAIRSVTDLPIHFHTHATSS SLAT +EM++AGCD+IDF+ ASMAD T+QPSLN FLAS  G +  P    YL LEPYD YW+++R+MY+PFE+GM SGTARV+DH+IPGGQYSNL  QCKSMG+WD+WE VLDMYRDVN LFG +VKVTPSSKCVGDLALYL+ RGL A DV  P    ++D+P SVV L+EG+LGFPHRGFP  V  A+L  K  LT RP A + PAD  G K+AL E
Sbjct:  592 QRYEKFRGMGKYAILSEEEQAAVLKDAAAIEIKKKERVKVDTTPSKIATYIAEKTILGDRSRLRGLAPKGVAKRSPVLPTVTKTPRSPE-----TAKKILDSQGPEALAAWVKNQKRVLLTDTTMRDAHQSLLATRVRSDDLIKGAKLANDLMGDAFSFEMWGGATFDVAYRFLNEDPWERLRKIREAAPDVCLQMLIRGSNAVGYASYPDNVVREFIQLAAQNGMDVFRIFDCFNDIKQMQVSIDTVRECGKVAEVCLCYTEDINTSEVYNVEYYKKLTQQAVDAGAHIIGIKDMAGLCKPLAAKPLVEAIRSVTDLPIHFHTHATSSASLATCMEMSKAGCDIIDFSAASMADGTAQPSLNAFLASMAGDERDPM-IDYLTLEPYDQYWAKIREMYSPFESGMLSGTARVYDHEIPGGQYSNLFAQCKSMGLWDRWEEVLDMYRDVNRLFGRVVKVTPSSKCVGDLALYLINRGLSAEDVLKPEIADKIDWPSSVVDLMEGKLGFPHRGFPSAVQDAVLKGKPQLTVRPGAVMDPADLVGKKTALEE 1134          
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Match: F0XWB2_AURAN (Acetyl-CoA carboxytransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWB2_AURAN)

HSP 1 Score: 668 bits (1723), Expect = 1.920e-225
Identity = 356/572 (62.24%), Postives = 417/572 (72.90%), Query Frame = 1
Query:    4 RYERFRALGSFDSLSREERDAAVEVAS--GASKPRSKPPRVSTTPCKLAVFLAEQVIHGERAAHKGRAPPGMTTTPPVPSLSSPPGSAEVSDLETAKSVLDAKGPEAMATWVRQKKRVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVCYRFLHEDPWERLRKIRAAAPNICLQ---------------------FVRLAAKNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQTSSIFSVEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSDITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALSPADFAGVKSALAEGKCGKVLGDVTEELVISYLLYPK 1650
            R+ ++RALG F  L    R AAV  A   GA++P+   P  ST PCKL   LA QV+ GER+  +G AP       P      PP +     +E AK+VLD  GPEAMA WVR + RV+VTDTTMRDAHQSLLATRVRT+DLV GA++AS LL +AFS E WGGATFDV YRFL EDPW+RLR +RAAAPN+C Q                     FVRLAA NG+DVFR+FDCFNDV QMR C+DAVR AGKVAEVCVCYTSD   S ++ V YY GVA  AA AGAH+IGIKDMAGLLKP AA  L+ AIR V DLP+HFHTH TSS S+A ALEM RAGCDV+DFATA+MAD TSQPSLN F A+ EG +  P G  Y+ LEPYDVYW++VR MY PFE GM +G+ARVFDH+IPGGQY+NL VQC+SMG+ D+WE VLD YRDVN LFGD+VKVTPSSKCVGDLALYLVTR + A+DV D +K   +D+PDSVV L+EGRLGFPHRGFP +V +AILG++KPLTTRPSAAL PADF G ++A      G+ L     E  ++ +LYPK
Sbjct:  542 RHGKYRALGEFAELDAAARAAAVADADARGAARPKRAAP--STAPCKLVAHLAAQVVGGERSRFRGLAPVNAPLEGPAAPAVEPPKA-----VENAKTVLDRSGPEAMAAWVRSQSRVLVTDTTMRDAHQSLLATRVRTLDLVRGARVASALLPDAFSFECWGGATFDVSYRFLKEDPWDRLRALRAAAPNVCTQMLIRGANAVGYTSYPDNVVTEFVRLAALNGMDVFRIFDCFNDVGQMRTCVDAVRAAGKVAEVCVCYTSDCLASDVYDVAYYAGVAAEAAAAGAHLIGIKDMAGLLKPAAAAPLLAAIRGVCDLPVHFHTHCTSSASVAVALEMTRAGCDVVDFATAAMADLTSQPSLNAFCAAMEGLERAP-GIDYMRLEPYDVYWAKVRAMYAPFETGMLAGSARVFDHEIPGGQYANLFVQCQSMGLADRWEEVLDAYRDVNKLFGDVVKVTPSSKCVGDLALYLVTRKMTAADVLDGSKT--LDYPDSVVGLMEGRLGFPHRGFPADVQQAILGDRKPLTTRPSAALPPADF-GAEAARLAAAHGRPLD---AERTMASVLYPK 1099          
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Match: A0A7S3NKJ5_9STRA (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKJ5_9STRA)

HSP 1 Score: 657 bits (1694), Expect = 2.650e-221
Identity = 341/575 (59.30%), Postives = 419/575 (72.87%), Query Frame = 1
Query:    1 QRYERFRALGSFDSLSREERDAAV-EVASGASKPRSKPPRVSTTPCKLAVFLAEQVIHGERAAHKGRAPPGMTT-TPPVPSLSSPPGSAEVSDLETAKSVLDAKGPEAMATWVRQKKRVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVCYRFLHEDPWERLRKIRAAAPNICLQ---------------------FVRLAAKNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQTSSIFSVEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVT--DLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSDITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALSPADFAGVKSALAEGKCGKVLGDVTEELVISYLLYPK 1650
            QRY ++RALG F  +  E+R A + ++ S  S  +++P +  TTPC+L  +LA QV+H ERA   G APP + T +P  P++ +       +   TAKS+LDA+GP+AMA WVR ++RV++TDTTMRDAHQSLLATRVRT+DLV+GAK A+ LL +AFS E WGGATFDV YRFL+EDPW+RLR+IRAA PN+CLQ                     FV LAAKNG+D+FR+FDCFND+ QM+ CIDAVR+ GKVAE CVCYTSD+ TSS+++ EYY  +AK   +AGAH I IKDMAGL+KP     ++ AIR+    D+PIHFHTH TSS SLA A+EM R GCD+IDFA ASMAD TSQPSLN F A+  G    P+   YL LEP DVYW +VR+MY PFE GM SG+ARV+DH+IPGGQY+NL VQCKSMG+ D+WE VLD YRDVN LFGDIVKVTPSSKCVGDLAL+L+ + LKA D+ DP K   +D+PDSVV L EGRLGFPHRGFP+EV+ AIL  K  LT RPS+AL PADF   +  L++ K G  L D   E V++ LLYPK
Sbjct:  519 QRYAKYRALGKFIEMDTEQRQATLRKLESEVSTKKARPVKPDTTPCRLVTYLANQVLHSERARFMGLAPPKVPTISPQAPAVEN-----VSTKAITAKSILDAQGPQAMAKWVRSQERVLLTDTTMRDAHQSLLATRVRTIDLVQGAKAANTLLCDAFSFECWGGATFDVAYRFLNEDPWDRLRQIRAACPNVCLQMLIRGANAVGYTSYPDNVVVRFVELAAKNGMDIFRIFDCFNDLNQMKTCIDAVRKTGKVAECCVCYTSDITTSSVYNAEYYTNLAKELCDAGAHTIAIKDMAGLMKPSGVVPILNAIRAGAGDDIPIHFHTHCTSSASLAVAMEMTRQGCDIIDFAIASMADLTSQPSLNAFCAAMAGMPRDPK-INYLALEPLDVYWMKVREMYAPFETGMLSGSARVYDHEIPGGQYANLFVQCKSMGLGDRWEEVLDAYRDVNQLFGDIVKVTPSSKCVGDLALFLINKNLKAFDILDPEKTKNIDYPDSVVGLFEGRLGFPHRGFPDEVTSAILQGKPKLTIRPSSALPPADFTKTQIELSD-KYGVQLDD---ERVMAALLYPK 1083          
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Match: A0A7S4DC20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC20_HETAK)

HSP 1 Score: 598 bits (1542), Expect = 3.310e-206
Identity = 304/477 (63.73%), Postives = 363/477 (76.10%), Query Frame = 1
Query:  283 AKSVLDAKGPEAMATWVRQKKRVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVCYRFLHEDPWERLRKIRAAAPNICLQ---------------------FVRLAAKNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQTSSIFSVEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSDITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEVSKAILGEKKPLTTRPSAALSPADFAGVKSALAEGKCGKVLGDVTEELVISYLLYPK 1650
            AK +LD +GPEA+A WVR ++RV++TDT+MRDAHQSLLATRVRT DLV+ A+LA+ LL +AFSLE WGGATFDV YRFL EDPWERLR+IR AAP++CLQ                     F+RLAA+NG+DVFR+FDCFND++QMRV ID VRE  K AEVC CYT D+ TS I++ +YYK VA++A  AGAH IGIKDMAGL KP AA  LVEAIRSVTDLPIHFHTHATS  SLATA+EMA+AG D++D A ASMAD TSQPS+N FLAS E    +P+   Y+ LEPYD+YW  VRDMY PFE+GM S TARV+DH+IPGGQYSNL+VQCKSMG+WD+WE VLDMYRDVN LFG +VKVTPSSKCVGDLALYLVTR L  +DV DPAK  ++DFP S   L+EG+LG PHRGFP  +   +L     L  RP AA++PAD A  ++ L E K     G  ++E V++ L+YPK
Sbjct:   13 AKRLLDREGPEALAAWVRAQERVLLTDTSMRDAHQSLLATRVRTDDLVKAARLANALLPDAFSLECWGGATFDVSYRFLSEDPWERLRRIREAAPDLCLQMLLRGSNAVGYASYPDNVVKEFIRLAAQNGMDVFRIFDCFNDIDQMRVSIDTVREYNKFAEVCACYTEDITTSDIYNQDYYKNVAEAAVTAGAHAIGIKDMAGLCKPLAAKPLVEAIRSVTDLPIHFHTHATSGASLATAMEMAKAGADIVDVAAASMADGTSQPSMNAFLASMESHPRSPK-MDYMKLEPYDMYWGGVRDMYKPFESGMLSSTARVYDHEIPGGQYSNLIVQCKSMGLWDRWEEVLDMYRDVNRLFGRVVKVTPSSKCVGDLALYLVTRNLTTADVLDPAKAAKIDFPASTKDLMEGKLGRPHRGFPARLEAVVLKGAPKLAGRPGAAMAPADLAAQRADL-EAK----YGGASDEDVVTSLMYPK 483          
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Match: A0A6H5JLQ2_9PHAE (Pyruvate carboxyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ2_9PHAE)

HSP 1 Score: 548 bits (1412), Expect = 1.380e-191
Identity = 274/319 (85.89%), Postives = 289/319 (90.60%), Query Frame = 1
Query:  568 NICLQFVRLAAKNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQTSSIFSVEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSDITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPG--------------GQYSNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEV 1482
            N+  +FVRLAA+NG+DVFRVFDCFNDVEQMRVCI+AVR+AGKVAE          TS IF+V+YYKGVAKSAAEAGAHMIGIKDMAGLLKPR+APLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGS++ P+GTGYLGLEPYDVYWSRVRDMY+PFENGMKSGTARVFDHQIPG              GQYSNLMVQCKSMGIWDKWE VLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVV LLEGRLGFPH+GFP+EV
Sbjct:   17 NVVTEFVRLAAQNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAE----------TSPIFTVDYYKGVAKSAAEAGAHMIGIKDMAGLLKPRSAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSEMAPDGTGYLGLEPYDVYWSRVRDMYSPFENGMKSGTARVFDHQIPGKIGEIHISCSRAKGGQYSNLMVQCKSMGIWDKWEGVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVGLLEGRLGFPHKGFPDEV 325          
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Match: A0A812Y569_SYMPI (Pyc protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812Y569_SYMPI)

HSP 1 Score: 507 bits (1305), Expect = 2.160e-163
Identity = 281/575 (48.87%), Postives = 373/575 (64.87%), Query Frame = 1
Query:    1 QRYERFRALGSFDSLSREERDAAVEVASGASKPRSKPPRVSTTPCKLAVFLAEQVIHGERAAHKGRAPPGMTTTPPVPSLSSPPGSAEVSDLETAKSVLDAKGPEAMATWVR--QKKRVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVCYRFLHEDPWERLRKIRAAAPNICLQ---------------------FVRLAAKNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQT--SSIFSVEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSDITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEVSKAIL-GEKKPLTTRPSAALSPADFAGVKSALAEGKCGKVLGDVTEELVISYLLYP 1647
            QRY++FR++G F   S EER+A   + S   + ++K  RV  TP K+  +L E+ + G  +  KG+ P        +     P   AE      AK +LD +GPEAMA WVR   K+R+++TDTT+RDAHQSL+ATR+RT D+++ A   S+ L   FSLE WGGATFDV YRFLHED ++RL ++RAA PNIC Q                     FVR AA +G+D+FR+FDCFNDVEQM+V I+AVR+  KVAE+ +C+T D       I++++YYK + K   +AGAHMI IKDMAGLLKP  A  ++E IRSV DLPIHFHTH TSS  LAT   MA AGCD++D   A+ AD TSQPSLN F+A+ EG    P+   +  LE  D YW+ VRDMY+PFE+GMK+ TARVF HQ+PGGQYSN+  QC S+G  + W+ VL MY DVN   GDIVKVTPSSK VGD+AL+LV +G++ SD  +  K   + +P S + L  G +G PH GFP+ ++ AIL G+ KP+  RP   L+P DF  VK+ + E    + + + T E + ++L+YP
Sbjct:  519 QRYQKFRSMGKFKEYSPEEREA---LTSAPVEEKAKRQRVVPTPPKILTYLTEKTLKGAHSFLKGKGPADCPRHCFLKVEVEPAAKAE----RNAKQILDEEGPEAMARWVRATSKERILLTDTTLRDAHQSLVATRMRTADMLKAAPEMSKHLHQYFSLECWGGATFDVAYRFLHEDAFQRLEELRAAVPNICTQMLLRGANGVGYKSYPDNVVEEFVRQAATSGMDIFRIFDCFNDVEQMKVSINAVRKMKKVAEIAMCFTGDFLNPDEKIYTLDYYKELCKKCVDAGAHMIAIKDMAGLLKPAHARPMIEIIRSVCDLPIHFHTHNTSSAQLATLHAMADAGCDIVDGCFAAFADGTSQPSLNAFIATMEGRPRDPK-INWKQLEGLDAYWASVRDMYSPFESGMKAMTARVFQHQVPGGQYSNMYAQCHSLG-GENWDKVLQMYADVNMWCGDIVKVTPSSKAVGDIALFLVKQGIEPSDFDNIPKMQSLHWPQSAIELARGEMGVPHFGFPQRMTAAILKGQLKPMEGRPGDTLAPEDFEKVKAQMKE----EFVMEPTSEDLNAFLMYP 1080          
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Match: A0A813D2P8_9DINO (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A813D2P8_9DINO)

HSP 1 Score: 506 bits (1302), Expect = 9.720e-162
Identity = 282/575 (49.04%), Postives = 373/575 (64.87%), Query Frame = 1
Query:    1 QRYERFRALGSFDSLSREERDAAVEVASGASKPRSKPPRVSTTPCKLAVFLAEQVIHGERAAHKGRAPPGMTTTPPVPSLSSPPGSAEVSDLETAKSVLDAKGPEAMATWVR--QKKRVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVCYRFLHEDPWERLRKIRAAAPNICLQ---------------------FVRLAAKNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQT--SSIFSVEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSDITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEVSKAIL-GEKKPLTTRPSAALSPADFAGVKSALAEGKCGKVLGDVTEELVISYLLYP 1647
            QRY++FR +G F   S EER+   ++ S  ++ +SK  R   TP KL  FL EQ + G+ +  KG+ P        +     P  +A+      AK +LD +GPEAMA WVR   K+R+++TDTT+RDAHQSL+ATR+RT D+++ A   S+ L   FSLE WGGATFDV YRFL+ED + RL ++RAA PNIC Q                     FVR AA +G+DVFR+FDCFNDVEQM+V I+AVR+  KVAE+ +C+T D  +    I++++YYK + +   +AGAHMI IKDMAGLL+P  A  +++ IRSVTDLPIHFHTH TSS  LAT   MA AGCD++D   A+ AD TSQPSLN FLA+ EG    P+   Y  LE  D YWS VRDMY+PFE+GMK+ TARVF HQ+PGGQYSN+  QC ++G  D W+ +L MY DVN   GDIVKVTPSSK VGD+AL+LV +G+  +D  +  K   + +P S + L  G +G PH GFP  +  AIL G+ KP+  RP   L+P DF  VK+A+ + + G    + T E + ++L+YP
Sbjct:  662 QRYQKFRNMGKFKEYSPEERE---KLTSAPAEHKSKRQRSVPTPPKLLTFLTEQTLKGDSSFFKGKGPKDCPRNCYLKVEPEPAAAAQ----RNAKQILDEEGPEAMAKWVRATSKERILLTDTTLRDAHQSLVATRMRTADMLKAAPEMSKHLHQYFSLECWGGATFDVAYRFLNEDAFRRLEELRAAVPNICTQMLLRGANGVGYKSYPDNVVEEFVRQAATSGMDVFRIFDCFNDVEQMKVSINAVRKMNKVAEIAMCFTGDFLSPDEKIYTLDYYKDLCQRCVDAGAHMIAIKDMAGLLRPAHAAPMIQVIRSVTDLPIHFHTHNTSSAQLATLHAMADAGCDIVDGCFAAFADGTSQPSLNAFLATMEGRPRDPK-INYRKLEGLDAYWSSVRDMYSPFESGMKAMTARVFQHQVPGGQYSNMYAQCHALG-GDNWDHILQMYADVNMWCGDIVKVTPSSKAVGDIALFLVKQGITPNDFDNLPKMQALHWPQSAIELARGEMGTPHFGFPRRMQDAILKGQLKPMEGRPGDTLAPEDFDKVKAAM-KAEFGT---EPTSEDMNAFLMYP 1223          
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Match: A0A812V7Y3_9DINO (Acetyl-CoA carboxytransferase n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V7Y3_9DINO)

HSP 1 Score: 496 bits (1276), Expect = 3.880e-159
Identity = 275/550 (50.00%), Postives = 357/550 (64.91%), Query Frame = 1
Query:    1 QRYERFRALGSFDSLSREERDAAVEVASGASKPRSKPPRVSTTPCKLAVFLAEQVIHGERAAHKGRAPPGMTTTPPVPSLSSPPGSAEVSDLETAKSVLDAKGPEAMATWVRQ--KKRVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVCYRFLHEDPWERLRKIRAAAPNICLQ---------------------FVRLAAKNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQT--SSIFSVEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSDITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEVSKAILGEK--KPLTTRPSAALSPADFAGVKS 1569
            QRY++FR++G F   S EER A   V +     + K  R   TP K+   L E  + G  +  +G+ P   +  P   SL   P  A   +   AK +LD +GPEAMA WVR+  K+RV++TDTTMRDAHQSL ATR+RT D+++ A   S+ L   FSLE WGGATFDV YRFL+ED + RL ++RAA PNIC Q                     FVR AA +G+DVFR+FDCFNDV+QM++ IDAVR+  KVAEV +C+T D  +    I+++ YY+ + K   +AGAHMI IKDMAGLLKP  A  L++ IRSVTDLPIHFHTH TSS  LAT   MA AGCD++D   A++AD TSQPSLN FLA+ EG    P+   +  LE  D YW++VRDMY+PFE+GMK+ TARVF+HQ+PGGQYSN+  QC+ +G  + W+ VL MY DVN   GDIVKVTPSSK VGD+AL+L+ +G++ SD  +  K   + +P S + L  G +G PH GFP+ +  AIL  +  KPL  RP   L+  DFA V++
Sbjct:  521 QRYQKFRSMGKFQEYSPEERAALTSVPADQ---KVKKRRTMPTPPKILTLLTETTVKGANSFFRGKGP---SYCPRTASLKVEPQPAAKPE-RNAKQILDEEGPEAMAKWVRETSKERVLLTDTTMRDAHQSLFATRMRTADMLKAAPEMSKHLHQYFSLECWGGATFDVAYRFLNEDAFRRLEELRAAIPNICTQMLLRGANGVGYKSYPDNVVEEFVRQAATSGMDVFRIFDCFNDVDQMKLSIDAVRKMKKVAEVAMCFTGDFLSPKEKIYTLGYYEELCKKCVDAGAHMIAIKDMAGLLKPAHAAPLIQVIRSVTDLPIHFHTHNTSSAQLATLHAMADAGCDIVDGCFAAIADGTSQPSLNAFLATMEGRPRDPK-IDHRMLEGLDSYWAKVRDMYSPFESGMKAMTARVFEHQVPGGQYSNMYAQCRELGNAENWDQVLQMYADVNKWCGDIVKVTPSSKSVGDIALFLLKQGIQVSDFDNLPKMQALQWPQSAIELARGEMGTPHFGFPKRMQDAILTGRQLKPLEGRPGDTLAAEDFAKVRA 1062          
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Match: A0A1Q9C6P9_SYMMI (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9C6P9_SYMMI)

HSP 1 Score: 506 bits (1302), Expect = 8.440e-159
Identity = 282/575 (49.04%), Postives = 373/575 (64.87%), Query Frame = 1
Query:    1 QRYERFRALGSFDSLSREERDAAVEVASGASKPRSKPPRVSTTPCKLAVFLAEQVIHGERAAHKGRAPPGMTTTPPVPSLSSPPGSAEVSDLETAKSVLDAKGPEAMATWVR--QKKRVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVCYRFLHEDPWERLRKIRAAAPNICLQ---------------------FVRLAAKNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQT--SSIFSVEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVTDLPIHFHTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGSDITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPGGQYSNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYLVTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEVSKAIL-GEKKPLTTRPSAALSPADFAGVKSALAEGKCGKVLGDVTEELVISYLLYP 1647
            QRY++FR +G F   S EER+   ++ S  ++ +SK  R   TP KL  FL EQ + G+ +  KG+ P        +     P  +A+      AK +LD +GPEAMA WVR   K+R+++TDTT+RDAHQSL+ATR+RT D+++ A   S+ L   FSLE WGGATFDV YRFL+ED + RL ++RAA PNIC Q                     FVR AA +G+DVFR+FDCFNDVEQM+V I+AVR+  KVAE+ +C+T D  +    I++++YYK + +   +AGAHMI IKDMAGLL+P  A  +++ IRSVTDLPIHFHTH TSS  LAT   MA AGCD++D   A+ AD TSQPSLN FLA+ EG    P+   Y  LE  D YWS VRDMY+PFE+GMK+ TARVF HQ+PGGQYSN+  QC ++G  D W+ +L MY DVN   GDIVKVTPSSK VGD+AL+LV +G+  +D  +  K   + +P S + L  G +G PH GFP  +  AIL G+ KP+  RP   L+P DF  VK+A+ + + G    + T E + ++L+YP
Sbjct: 1094 QRYQKFRNMGKFKEYSPEERE---KLTSAPAEHKSKRQRSVPTPPKLLTFLTEQTLKGDSSFFKGKGPKDCPRNCYLKVEPEPAAAAQ----RNAKQILDEEGPEAMAKWVRATSKERILLTDTTLRDAHQSLVATRMRTADMLKAAPEMSKHLHQYFSLECWGGATFDVAYRFLNEDAFRRLEELRAAVPNICTQMLLRGANGVGYKSYPDNVVEEFVRQAATSGMDVFRIFDCFNDVEQMKVSINAVRKMNKVAEIAMCFTGDFLSPDEKIYTLDYYKDLCQRCVDAGAHMIAIKDMAGLLRPAHAAPMIQVIRSVTDLPIHFHTHNTSSAQLATLHAMADAGCDIVDGCFAAFADGTSQPSLNAFLATMEGRPRDPK-INYRKLEGLDAYWSSVRDMYSPFESGMKAMTARVFQHQVPGGQYSNMYAQCHALG-GDNWDHILQMYADVNMWCGDIVKVTPSSKAVGDIALFLVKQGITPNDFDNLPKMQALHWPQSAIELARGEMGTPHFGFPRRMQDAILKGQLKPMEGRPGDTLAPEDFDKVKAAM-KAEFGT---EPTSEDMNAFLMYP 1655          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10665.888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM14_ECTSI0.000e+087.23Acetyl-CoA carboxytransferase n=1 Tax=Ectocarpus s... [more]
A0A7S3Y4I5_HETAK1.070e-22561.20Acetyl-CoA carboxytransferase n=2 Tax=Sar TaxID=26... [more]
F0XWB2_AURAN1.920e-22562.24Acetyl-CoA carboxytransferase n=1 Tax=Aureococcus ... [more]
A0A7S3NKJ5_9STRA2.650e-22159.30Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
A0A7S4DC20_HETAK3.310e-20663.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5JLQ2_9PHAE1.380e-19185.89Pyruvate carboxyltransferase domain-containing pro... [more]
A0A812Y569_SYMPI2.160e-16348.87Pyc protein n=1 Tax=Symbiodinium pilosum TaxID=295... [more]
A0A813D2P8_9DINO9.720e-16249.04Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
A0A812V7Y3_9DINO3.880e-15950.00Acetyl-CoA carboxytransferase n=1 Tax=Symbiodinium... [more]
A0A1Q9C6P9_SYMMI8.440e-15949.04Acetyl-coenzyme A carboxylase carboxyl transferase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10665contigP-canaliculata_contig10665:504..6771 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score959.5
Seed ortholog evalue6.7e-277
Seed eggNOG ortholog2880.D8LM14
EggNOG free text desc.pyruvate carboxylase activity
EggNOG OGsCOG1038@1,COG4799@1,KOG0369@2759,KOG0540@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioncarboxylase
Ec32 orthologEc-14_002460.2
Exons11
Model size1667
Cds size1665
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815636.687824-CDS-P-canaliculata_contig10665:503..6041622815636.687824-CDS-P-canaliculata_contig10665:503..604Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 504..604 +
1693494179.5152414-CDS-P-canaliculata_contig10665:503..6041693494179.5152414-CDS-P-canaliculata_contig10665:503..604Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 504..604 +
1622815636.698172-CDS-P-canaliculata_contig10665:1096..13821622815636.698172-CDS-P-canaliculata_contig10665:1096..1382Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 1097..1382 +
1693494179.5258794-CDS-P-canaliculata_contig10665:1096..13821693494179.5258794-CDS-P-canaliculata_contig10665:1096..1382Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 1097..1382 +
1622815636.7081037-CDS-P-canaliculata_contig10665:1911..20011622815636.7081037-CDS-P-canaliculata_contig10665:1911..2001Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 1912..2001 +
1693494179.5355341-CDS-P-canaliculata_contig10665:1911..20011693494179.5355341-CDS-P-canaliculata_contig10665:1911..2001Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 1912..2001 +
1622815636.7206507-CDS-P-canaliculata_contig10665:2275..23801622815636.7206507-CDS-P-canaliculata_contig10665:2275..2380Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 2276..2380 +
1693494179.5448883-CDS-P-canaliculata_contig10665:2275..23801693494179.5448883-CDS-P-canaliculata_contig10665:2275..2380Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 2276..2380 +
1622815636.733223-CDS-P-canaliculata_contig10665:2969..30891622815636.733223-CDS-P-canaliculata_contig10665:2969..3089Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 2970..3089 +
1693494179.5538595-CDS-P-canaliculata_contig10665:2969..30891693494179.5538595-CDS-P-canaliculata_contig10665:2969..3089Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 2970..3089 +
1622815636.7463298-CDS-P-canaliculata_contig10665:3707..38211622815636.7463298-CDS-P-canaliculata_contig10665:3707..3821Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 3708..3821 +
1693494179.565873-CDS-P-canaliculata_contig10665:3707..38211693494179.565873-CDS-P-canaliculata_contig10665:3707..3821Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 3708..3821 +
1622815636.7574596-CDS-P-canaliculata_contig10665:4216..44161622815636.7574596-CDS-P-canaliculata_contig10665:4216..4416Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 4217..4416 +
1693494179.5738633-CDS-P-canaliculata_contig10665:4216..44161693494179.5738633-CDS-P-canaliculata_contig10665:4216..4416Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 4217..4416 +
1622815636.767725-CDS-P-canaliculata_contig10665:4719..48921622815636.767725-CDS-P-canaliculata_contig10665:4719..4892Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 4720..4892 +
1693494179.5818565-CDS-P-canaliculata_contig10665:4719..48921693494179.5818565-CDS-P-canaliculata_contig10665:4719..4892Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 4720..4892 +
1622815636.7777736-CDS-P-canaliculata_contig10665:5328..54441622815636.7777736-CDS-P-canaliculata_contig10665:5328..5444Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 5329..5444 +
1693494179.5924623-CDS-P-canaliculata_contig10665:5328..54441693494179.5924623-CDS-P-canaliculata_contig10665:5328..5444Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 5329..5444 +
1622815636.7875133-CDS-P-canaliculata_contig10665:6111..62851622815636.7875133-CDS-P-canaliculata_contig10665:6111..6285Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 6112..6285 +
1693494179.6064565-CDS-P-canaliculata_contig10665:6111..62851693494179.6064565-CDS-P-canaliculata_contig10665:6111..6285Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 6112..6285 +
1622815636.8044157-CDS-P-canaliculata_contig10665:6583..67691622815636.8044157-CDS-P-canaliculata_contig10665:6583..6769Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 6584..6769 +
1693494179.6181238-CDS-P-canaliculata_contig10665:6583..67691693494179.6181238-CDS-P-canaliculata_contig10665:6583..6769Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10665 6584..6769 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10665.888.1prot_P-canaliculata_contig10665.888.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig10665 504..6769 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10665.888.1

>prot_P-canaliculata_contig10665.888.1 ID=prot_P-canaliculata_contig10665.888.1|Name=mRNA_P-canaliculata_contig10665.888.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=555bp
QRYERFRALGSFDSLSREERDAAVEVASGASKPRSKPPRVSTTPCKLAVF
LAEQVIHGERAAHKGRAPPGMTTTPPVPSLSSPPGSAEVSDLETAKSVLD
AKGPEAMATWVRQKKRVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQ
LLGNAFSLEMWGGATFDVCYRFLHEDPWERLRKIRAAAPNICLQFVRLAA
KNGVDVFRVFDCFNDVEQMRVCIDAVREAGKVAEVCVCYTSDLQTSSIFS
VEYYKGVAKSAAEAGAHMIGIKDMAGLLKPRAAPLLVEAIRSVTDLPIHF
HTHATSSCSLATALEMARAGCDVIDFATASMADCTSQPSLNGFLASTEGS
DITPEGTGYLGLEPYDVYWSRVRDMYTPFENGMKSGTARVFDHQIPGGQY
SNLMVQCKSMGIWDKWESVLDMYRDVNNLFGDIVKVTPSSKCVGDLALYL
VTRGLKASDVTDPAKKGQVDFPDSVVSLLEGRLGFPHRGFPEEVSKAILG
EKKPLTTRPSAALSPADFAGVKSALAEGKCGKVLGDVTEELVISYLLYPK
ARQNN
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mRNA from alignment at P-canaliculata_contig10665:504..6771+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10665.888.1 ID=mRNA_P-canaliculata_contig10665.888.1|Name=mRNA_P-canaliculata_contig10665.888.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=6268bp|location=Sequence derived from alignment at P-canaliculata_contig10665:504..6771+ (Pelvetia canaliculata dioecious)
CAGCGCTACGAACGTTTCCGCGCCCTCGGAAGCTTCGACTCGCTATCTAG GGAGGAGAGGGACGCGGCGGTAGAGGTCGCGTCAGGGGCTTCGAAGCCCA GGTAAGCGACGCGACTGCTGCTGCTGCATTCGATTTCTGCGGTTATGCCG TGCTCCGCCGCAAGCCTTGCCGAAGTGAGAGAGAGATGCTGCAGTCTTCA AGTTGGCATGTGTACATGTGAAACGAAGATATTGGGCCACAAAAAATCCT CACCCAAATTTTTTTGGAGCTGGCCTGACGGGCTGTCCTCGCGAGAGCGC TCGCCTGACCAACCACGCGATCGTGGTGGACCGATGTATTATTGGTCACG AGGTCTTCTCACTCTTTCCTTGTGCGGGGAACTTTTAAGTTTACGTTTAC ACACAATCACACACTTATACTTGCGTTTACACATATTTGCACTTACGCAC ACCAAAATGTATTTACACGTACCCCGCACTAAAACGTACTCATACACCCT AAACGTACACTTACACACTTTGACTTACACTTGAGACACATCCCCGTGCG TCTTGGTGCGCCCTCGCCGCAATATTTTATCTCCATCGCGCAGGTCTAAA CCCCCGAGGGTGTCCACCACTCCCTGCAAGCTCGCGGTTTTCCTCGCCGA GCAGGTGATTCACGGGGAGCGGGCGGCCCACAAAGGACGCGCCCCGCCAG GCATGACCACCACTCCGCCGGTGCCGTCGCTGTCTTCCCCGCCCGGTTCG GCCGAAGTCTCTGACCTGGAGACGGCCAAGTCCGTCCTGGACGCCAAAGG TCCGGAGGCCATGGCGACATGGGTCAGGCAGAAGAAGAGGGTCATGGTCA CTGACACCACGATGCGTGACGCCCACCAGGTGTGATGGTTGAAAGAGTGT CGCCGCGCGGGGTTAATGTCTCGTCGTTTTGCGCCCCCCCCCTCCCCCGC TCGTTGGCGAAGGCGTTCCGTTTCTACTTACTTTGTTGGCTGAAGGGAGA AATGAAGGGCTGGAGTGAAATACTGTTGGGGGCGACGCGTACGATGACGC AGGTGGTGTGGCAAAAGGCGACACCTACTGACTGCTTTTGGACTTGTATG ACGATTTACGTGATTGTTTCACGCGGATGCTGGTCGCCGCACGGTTTTCA CATATTTACGCCCAGGCGTCCTGTCGAATTTTCTTGTGGAGCGGGCTGTC AAAAAAGACTCCTTTAAGGTGCCTTCCCTGAACTAATGCGCCACGCACCG TACCCTCGACGCGAGTTATAGGTTAATACAGGATTGAATTCAAGTCACGT TTTGTTTGAAGGGGGTTGATTCATGGCCGGTTTGTGGCGGTCTACCATGC CCTCGTTTCTCCACGTCTCACCTACGCCCCATACCCCATTCCTTCTCTCT TCTCGTAGTCGCTGCTGGCGACGAGAGTCCGTACGGTGGACCTCGTGGAG GGTGCCAAGCTGGCCTCACAGCTCCTCGGAAACGCCTTCTCGCTTGAGGT ACGATTAGCTCTACGTTACTGGATCATTACTCTGGCGAATGTGGGGACCG CACGCTGTCCGTCGATTGTCGTCTTCCCCGCGTTCCGTTGGCGTCTTTTT ATCCTTGGGGACGAAAATAGTTTGGGCGACGCCGATTTTCCGAGTACGTA ATAGTTTTACCTTGTCGGTAAAAAACGTTCGGAAAACGGTGTGGACGAAA CATCGCCGTCTCCCTCCAATCGCCGCGCCATGTTCGTGGTGTGCCGTGCG CCCCTACGCCCCTCTCGGGCAGATGTGGGGAGGCGCGACGTTCGACGTGT GCTACCGCTTTCTGCACGAGGACCCTTGGGAGAGGCTCAGGAAGATCCGC GCCGCGGCGCCCAACATCTGCCTTCAGGTTAGGCAAAAATCTTGTGTGTG TGTGTGTGTGTGTGTCCCTCCCCCCGTATTTCTTCTTTTCCTACAGTAAC AAGAATCTGTCCGTTCGTTCGTGCACTTACGCGGTCGAGTACCATGGACG CGTGGGTTTTCTTTTGATCGTTGATGGTATGAACCCGCCTCGGCACGATG AGACAGACGCGGGCGGAGCGTCGATTTCTGAGGTTGGTCGACGCTCCCCC CCACCCTGAAAGAGGGGAGCCTCCCGGGCGTGCATCATTTGCGGCGCAGC GTGCATTCCAGCGACAAAAGGGAAAAAATCGCGTTCCATCCCATGAACGT TTCTTGCTTGCGAGTTTTGAAGAGGGGGGAGGGGGGGGGTATGGATATCC CCTCTCCTACGGTGACTCCAGACTTTTTTTTCTGCAGCGAACTCATATAC ATGTAACCTACTTATCTTGGGAAACGTTCACAGCCTCATCTGCAATGTGT TGCTATTTTACTCGCAACACTTTTCTGTCTGTCCTCCCTGTGCGGCTTAA AAGATGTTGATCCGCGGGTCTAACGCTGTCGGATACACGTCGTATCCGGA CAATGTGGTGACGGAGTTCGTGAGGCTGGCCGCGAAAAACGGGGTGGACG TGTTCCGAGTGTTCGATTGCTTCAATGACGTTGAGCAGATGCGGGTGTGC ATTGATGCTGTACGCGAAGCCGGCAAGGTGGCAGAGGTAAGAGGGGAGGA TAACGAGGGCACAAGAATCAAGCACCATAGCGACTTTTGGTGGTTGCTTT TTGCGTTTTTTCACCATTCCACAATGTGTTTTTTTATGTTTCATTTTCTC AACTTCTTGCGCAGAACAGAACACAAGGGATGAGCAGATGAGTGTAGAGG TCGGGCGTAGTGAAGGGGGGAGCGAGAACCGGACTGATTGATATGAGTAA CTACAAGGAGTGGCAGAATCCGTACGCGTGGTACACAAACCGTCGAAATC CACGACGTCATTTTTTCTTCCTTGCGCCCCATGGTACCCTCATGTGTGAT TACGTCGTGTTGCTGCATCGTTTCTCCACCACAATACAATACTACTGATC GTTTCTCCAACGCGCGTTAATTTGGGTACCCAGTAGTCGCCGTGCGTGTG CCATGCCCTCGGACTAATGTAGAACCCCCCTGCCCCCCCTCCCCTTCCCA TCAACATACGTACTTAGCGATGCCCCGTCTAGGAAAAAACTCTTTCTCGA GTGCATTCATCTGCTTGGCGTGCGCCGACTGTTCCCCACGTGCCCCTTGA CGTTCCGCGATGCCCCGTGATGTCCCGTATCGTGCGTGGGCTACACCATC CAAGGTGTGCGTGTGCTACACTTCAGACCTGCAGACGTCTTCGATCTTCT CAGTGGAGTACTACAAGGGCGTCGCCAAGAGCGCCGCGGAGGCCGGAGCC CACATGATCGGCATCAAGGTAGCTCCCAACAATTATTAATAAACCACCAC ACGTCCACGACGGCCGTTCCGCCGATTACTGGAACCATAGCGTCGGCCTT GTTTTGCGAACGTTTCCCGCCCACCATGACACCTCCCCTAAATAATATAG GGATGCACCAGGTATGTATCGTACAGCACGCTCCCAACTTCCTCTCGACG TAGTAGTTTGTGACGGTGTTCCACCTCGTGTGGCGTTTTTCTCCACTTAC CCGAGCAGGGCGTCTCGTAGCTTTTAGGTTCTCTGGCGGCCCGACGCGTG CCACACCAGAAACCGGGGACAAAACCCGCTTGAAGCGACTCACACCACCT TACCTTACCTTACCTTACCTTACCTTACCTTACCTTACCGACCCGGCGTT CGCGCGCGCGCAGGATATGGCTGGTCTCCTAAAGCCGAGGGCCGCACCGC TGCTCGTGGAGGCGATCCGTTCTGTGACGGATCTCCCCATCCACTTCCAC ACCCACGCCACCAGCTCTTGCTCTCTGGCCACGGCCCTCGAAATGGCTCG GGCGGGCTGCGACGTGATCGACTTCGCCACGGCGTCCATGGCGGACTGCA CCTCCCAGCCGAGGTAAAGAAGAGTCAAAAGCAAAAATAAAGATGGAACC GGAAGCAGGCGTGACCGAGACAGGGGACGGGGGCGAGGGGCAGGGGGGCG TGCGTTTGCGTTTGGTTCGCGCATGTTACGCTTGACCAGCTCCTGGGTTC ATGTACGCGGGGGTTCCTCGTCAAAGGAATGTTCGCTACGGTAGCCTCGT CTTTCTTCATCTTTTCAAGACCCCCCACTTCTTTTAATACATACCCCCTA TCCCCGTTCTCAAATATTATATTTCGGTGTTTGGATTACTCTACTCATTT GCCGAACGGAACACAGCCTGAACGGATTCCTCGCCTCCACCGAGGGTAGC GACATTACCCCGGAGGGAACGGGCTACCTCGGGCTCGAACCTTACGACGT TTACTGGAGCCGGGTACGGGATATGTACACGCCTTTCGAGAACGGCATGA AGAGCGGGACGGCCAGGGTGTTCGACCACCAGATCCCAGGTGAGGGGGGG GGGGAAGCGGAGCACCGAAAACTAACCGTGCGCCCTGAGCGGGAGCTTCG AAAAGCCTCGATTTTCCCACTCGCAGGTCTTGTTCCCTTTCACGAGGGAG TGCGCGTTTCACTCGCCAAGTCTACCCCGACCGCCCTGTTGGATGTGATT TGATTTGATTTGATTTGACTGATATCTGACGGAACACGAACGATAATAGT ATATTTTGAGAGATACTTTGCGCCAAGGCAGAGGAAGGTCTTATGCTTTG TCGCGGAGAGATGCCGCCGCCGTTGGGTTTTTCTTTCCCTCCTTACGGGT TGGCTTGAAGCGAGGCGAGGCGAGAGCTGGAACTCGCTGGCTGAAGTCGC GAGTCTGTCCGGTGTTTGTCCCCCTGAGAAAATGCCCCAACGTTCCAACT CTCCGACGCTCGCTTCAATATGCAGGCGGGCAGTACTCCAACCTTATGGT GCAGTGCAAGAGCATGGGCATCTGGGACAAGTGGGAGAGCGTCTTGGACA TGTACCGCGACGTCAACAACTTGTTCGGAGACATCGTCAAGGTGCGGTTG GAATTCTGTATCTCGAAAACCCTCTTCATTAGGGCGGCCGCGACGCAAAA CGTTACAATACTAACCACACCCATCATATCCTTCCCCCCCTTCCCCCGCT CCATTCTTTGTCTCGTAAATGACTCAAAATGACTCACGTGCGGTGGATTC GCAGATCGAATTCGGGTCTAGCTACAAATATCTCAGGTTTAATTAGAACC TGAGGTGGCTAGACCTGGGCTCGATGCCCGGGGTCGCGATCGTCTTTATC CAAGTACCGCGTGCGAAGAAACGGCATGAAATGTTATCTGAGAGAGGCGG CCCGATGGTCATTTGGACTCTTGGAGGGTCGCAGGAAGGGTGATATTCCG TGGACGAATTCGAAAATTCGGATAAGCTAAGAGCGCTACTGACGAGGGGA CAGCCTTGGCATACTGTTTTAGTGATCATGGCTATTCGAGCCCCTCGGTT TAGCTTTTGTCTTGGTGGTAGCAATACCCCCGAGGTACTCGCCCGGCCAC AGCTGGCTTGAGCAAGTGGCTCAATGGTTTATTTTGTAAATTTGACGTGC CCCTTCTCTCTTTGAGAAAGCCTCTTCGAAAACCCCTCGTACCATAATAT ACTATAATGCTCCGTATATGTAACGGCTGCCCTTGTTGACTCCTCCTCTG TCTTGCAGGTGACGCCGTCGTCGAAGTGCGTGGGCGACCTCGCGTTGTAC CTCGTAACGAGAGGACTGAAGGCGTCGGATGTGACCGATCCCGCCAAGAA GGGTCAAGTCGACTTCCCGGACTCTGTCGTGTCCCTGCTCGAGGGCCGGC TCGGCTTCCCACACAGGGGTTTCCCAGAGGAGGTGAAACCCGACCTGTAG ATGGAAATCGACTCTCGCGTCGAGGTTGCAGGGAAACGCGCTTTTCTCTA CACGTCAGTGAGCGGAATCGACGGTTTCCTCGAGCGCCCGAGCGCAGCAA CAACGAAGAAGTTAGAGTGTGCCAACTCTATTAATATCAATGACATTATT AACAGTAAGTATCCGGTAGCTGCCAATTTGTTTGGGGGTTTTGCCCTGGC GTCACCAATGCATATCCAATGTATAATGTATATCGCTCGGCCCTCTTGCG TCAACGCCCGTGGCGTGCTGCGGTCGGCAGGTGTCCAAGGCCATCCTGGG AGAGAAGAAACCGTTGACTACCAGGCCCAGCGCCGCGCTATCCCCGGCTG ACTTCGCCGGGGTGAAATCGGCGCTGGCGGAGGGCAAATGCGGGAAGGTG CTGGGAGATGTCACGGAGGAGCTCGTCATCTCGTACCTGCTGTACCCGAA GGCAAGGCAAAATAACGC
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Coding sequence (CDS) from alignment at P-canaliculata_contig10665:504..6771+

>mRNA_P-canaliculata_contig10665.888.1 ID=mRNA_P-canaliculata_contig10665.888.1|Name=mRNA_P-canaliculata_contig10665.888.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=3330bp|location=Sequence derived from alignment at P-canaliculata_contig10665:504..6771+ (Pelvetia canaliculata dioecious)
CAGCGCTACGAACGTTTCCGCGCCCTCGGAAGCTTCGACTCGCTATCTAG
GGAGGAGAGGGACGCGGCGGTAGAGGTCGCGTCAGGGGCTTCGAAGCCCA
GCAGCGCTACGAACGTTTCCGCGCCCTCGGAAGCTTCGACTCGCTATCTA
GGGAGGAGAGGGACGCGGCGGTAGAGGTCGCGTCAGGGGCTTCGAAGCCC
AGGTCTAAACCCCCGAGGGTGTCCACCACTCCCTGCAAGCTCGCGGTTTT
CCTCGCCGAGCAGGTGATTCACGGGGAGCGGGCGGCCCACAAAGGACGCG
CCCCGCCAGGCATGACCACCACTCCGCCGGTGCCGTCGCTGTCTTCCCCG
CCCGGTTCGGCCGAAGTCTCTGACCTGGAGACGGCCAAGTCCGTCCTGGA
CGCCAAAGGTCCGGAGGCCATGGCGACATGGGTCAGGCAGAAGAAGAGGG
TCATGGTCACTGACACCACGATGCGTGACGCCCACCAGGTCTAAACCCCC
GAGGGTGTCCACCACTCCCTGCAAGCTCGCGGTTTTCCTCGCCGAGCAGG
TGATTCACGGGGAGCGGGCGGCCCACAAAGGACGCGCCCCGCCAGGCATG
ACCACCACTCCGCCGGTGCCGTCGCTGTCTTCCCCGCCCGGTTCGGCCGA
AGTCTCTGACCTGGAGACGGCCAAGTCCGTCCTGGACGCCAAAGGTCCGG
AGGCCATGGCGACATGGGTCAGGCAGAAGAAGAGGGTCATGGTCACTGAC
ACCACGATGCGTGACGCCCACCAGTCGCTGCTGGCGACGAGAGTCCGTAC
GGTGGACCTCGTGGAGGGTGCCAAGCTGGCCTCACAGCTCCTCGGAAACG
CCTTCTCGCTTGAGTCGCTGCTGGCGACGAGAGTCCGTACGGTGGACCTC
GTGGAGGGTGCCAAGCTGGCCTCACAGCTCCTCGGAAACGCCTTCTCGCT
TGAGATGTGGGGAGGCGCGACGTTCGACGTGTGCTACCGCTTTCTGCACG
AGGACCCTTGGGAGAGGCTCAGGAAGATCCGCGCCGCGGCGCCCAACATC
TGCCTTCAGATGTGGGGAGGCGCGACGTTCGACGTGTGCTACCGCTTTCT
GCACGAGGACCCTTGGGAGAGGCTCAGGAAGATCCGCGCCGCGGCGCCCA
ACATCTGCCTTCAGTTCGTGAGGCTGGCCGCGAAAAACGGGGTGGACGTG
TTCCGAGTGTTCGATTGCTTCAATGACGTTGAGCAGATGCGGGTGTGCAT
TGATGCTGTACGCGAAGCCGGCAAGGTGGCAGAGTTCGTGAGGCTGGCCG
CGAAAAACGGGGTGGACGTGTTCCGAGTGTTCGATTGCTTCAATGACGTT
GAGCAGATGCGGGTGTGCATTGATGCTGTACGCGAAGCCGGCAAGGTGGC
AGAGGTGTGCGTGTGCTACACTTCAGACCTGCAGACGTCTTCGATCTTCT
CAGTGGAGTACTACAAGGGCGTCGCCAAGAGCGCCGCGGAGGCCGGAGCC
CACATGATCGGCATCAAGGTGTGCGTGTGCTACACTTCAGACCTGCAGAC
GTCTTCGATCTTCTCAGTGGAGTACTACAAGGGCGTCGCCAAGAGCGCCG
CGGAGGCCGGAGCCCACATGATCGGCATCAAGGATATGGCTGGTCTCCTA
AAGCCGAGGGCCGCACCGCTGCTCGTGGAGGCGATCCGTTCTGTGACGGA
TCTCCCCATCCACTTCCACACCCACGCCACCAGCTCTTGCTCTCTGGCCA
CGGCCCTCGAAATGGCTCGGGCGGGCTGCGACGTGATCGACTTCGCCACG
GCGTCCATGGCGGACTGCACCTCCCAGCCGAGGATATGGCTGGTCTCCTA
AAGCCGAGGGCCGCACCGCTGCTCGTGGAGGCGATCCGTTCTGTGACGGA
TCTCCCCATCCACTTCCACACCCACGCCACCAGCTCTTGCTCTCTGGCCA
CGGCCCTCGAAATGGCTCGGGCGGGCTGCGACGTGATCGACTTCGCCACG
GCGTCCATGGCGGACTGCACCTCCCAGCCGAGCCTGAACGGATTCCTCGC
CTCCACCGAGGGTAGCGACATTACCCCGGAGGGAACGGGCTACCTCGGGC
TCGAACCTTACGACGTTTACTGGAGCCGGGTACGGGATATGTACACGCCT
TTCGAGAACGGCATGAAGAGCGGGACGGCCAGGGTGTTCGACCACCAGAT
CCCAGCCTGAACGGATTCCTCGCCTCCACCGAGGGTAGCGACATTACCCC
GGAGGGAACGGGCTACCTCGGGCTCGAACCTTACGACGTTTACTGGAGCC
GGGTACGGGATATGTACACGCCTTTCGAGAACGGCATGAAGAGCGGGACG
GCCAGGGTGTTCGACCACCAGATCCCAGGCGGGCAGTACTCCAACCTTAT
GGTGCAGTGCAAGAGCATGGGCATCTGGGACAAGTGGGAGAGCGTCTTGG
ACATGTACCGCGACGTCAACAACTTGTTCGGAGACATCGTCAAGGCGGGC
AGTACTCCAACCTTATGGTGCAGTGCAAGAGCATGGGCATCTGGGACAAG
TGGGAGAGCGTCTTGGACATGTACCGCGACGTCAACAACTTGTTCGGAGA
CATCGTCAAGGTGACGCCGTCGTCGAAGTGCGTGGGCGACCTCGCGTTGT
ACCTCGTAACGAGAGGACTGAAGGCGTCGGATGTGACCGATCCCGCCAAG
AAGGGTCAAGTCGACTTCCCGGACTCTGTCGTGTCCCTGCTCGAGGGCCG
GCTCGGCTTCCCACACAGGGGTTTCCCAGAGGAGGTGACGCCGTCGTCGA
AGTGCGTGGGCGACCTCGCGTTGTACCTCGTAACGAGAGGACTGAAGGCG
TCGGATGTGACCGATCCCGCCAAGAAGGGTCAAGTCGACTTCCCGGACTC
TGTCGTGTCCCTGCTCGAGGGCCGGCTCGGCTTCCCACACAGGGGTTTCC
CAGAGGAGGTGTCCAAGGCCATCCTGGGAGAGAAGAAACCGTTGACTACC
AGGCCCAGCGCCGCGCTATCCCCGGCTGACTTCGCCGGGGTGAAATCGGC
GCTGGCGGAGGGCAAATGCGGGAAGGTGCTGGGAGATGTCACGGAGGAGC
TCGTCATCTCGTACCTGCTGTACCCGAAGGCAAGGCAAAATAACGTGTCC
AAGGCCATCCTGGGAGAGAAGAAACCGTTGACTACCAGGCCCAGCGCCGC
GCTATCCCCGGCTGACTTCGCCGGGGTGAAATCGGCGCTGGCGGAGGGCA
AATGCGGGAAGGTGCTGGGAGATGTCACGGAGGAGCTCGTCATCTCGTAC
CTGCTGTACCCGAAGGCAAGGCAAAATAAC
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