mRNA_P-canaliculata_contig105549.760.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: UPI00167BAC6B (sensor N-terminal transmembrane domain-containing protein n=2 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00167BAC6B) HSP 1 Score: 479 bits (1234), Expect = 4.630e-165 Identity = 250/316 (79.11%), Postives = 286/316 (90.51%), Query Frame = 1
Query: 1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
RSLWTSRLTR IFLSNL+GL ILV+G LAMNRFE+GLINAKV NIQ+L+STITTVIGEQATG+GGTA+LD++GA Q+LRGVNV +GWRV+LHDK+G LVADT L +I +E L PI+ED+P+RP Q+VWRENIR W + LH+LPWRKA+RE+LR++LK E+RAGL G+ + GPRYD NDNLIVTVS P+QRVQQVLGVVTVES+DV+SIV RQAL PIIGLAFLAMFL+SLALTLFISLP+RRLARAAEIVTRSA+KRDAIPDLS RRDEIGDLSLVLRDMT+GLY+RIDDIANFAADVAHEIKNPLTSLRS
Sbjct: 27 RSLWTSRLTRNIFLSNLVGLIILVSGMLAMNRFETGLINAKVDNIQTLSSTITTVIGEQATGYGGTAELDIEGASQVLRGVNVPDGWRVRLHDKAGQLVADTLTLSDTIITESLDPILEDIPERPKQDVWRENIRGWMNKTLHDLPWRKARRETLRRDLKSEIRAGLEGDSSYGPRYDANDNLIVTVSQPVQRVQQVLGVVTVESSDVSSIVNDARQALIPIIGLAFLAMFLSSLALTLFISLPMRRLARAAEIVTRSAKKRDAIPDLSARRDEIGDLSLVLRDMTQGLYSRIDDIANFAADVAHEIKNPLTSLRS 342
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A420WII3_9PROT (Histidine kinase n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WII3_9PROT) HSP 1 Score: 421 bits (1082), Expect = 6.990e-142 Identity = 220/316 (69.62%), Postives = 268/316 (84.81%), Query Frame = 1
Query: 1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
R L++SRLT+ IF SNLIGL ILV+GSLAMNRFES LI AKV N+ SLA+TITTVIGEQATGFG A+LD+DGA+Q+LRGVNV GWRV+LHD+SG +VADT RLD +IT L PII + + EVW+E ++ W + + NLPWRKAKR R++L+ +VR+ L+GE + GPRYD+ DNLIV+VS+P+QRVQQVLGVVTVESNDV +IV+AER+ALAPIIGLA LA L+SLALTLFI+LP+R+L+ AAE+V+RS+ KRDAIPDLS+RRDEIGDLS ++R+MT GLY+RIDDIANFAADVAHEIKNPLTSLRS
Sbjct: 34 RRLFSSRLTQVIFFSNLIGLLILVSGSLAMNRFESSLIEAKVDNLHSLAATITTVIGEQATGFGSAAKLDIDGAKQVLRGVNVPSGWRVRLHDRSGGVVADTERLDDTITISPLDPIIPEQEPQKNYEVWKEELQEWTQNHIQNLPWRKAKRNHFRRDLRADVRSALSGEKSMGPRYDDKDNLIVSVSVPVQRVQQVLGVVTVESNDVGNIVSAERKALAPIIGLAVLAALLSSLALTLFITLPMRKLSIAAEVVSRSSDKRDAIPDLSKRRDEIGDLSSMMREMTLGLYSRIDDIANFAADVAHEIKNPLTSLRS 349
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: UPI0003F7E84E (sensor N-terminal transmembrane domain-containing protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0003F7E84E) HSP 1 Score: 409 bits (1052), Expect = 4.030e-137 Identity = 215/316 (68.04%), Postives = 262/316 (82.91%), Query Frame = 1
Query: 1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
RSL TSRLTR IF SNLIGL ILV GSLAM RF++GLI AK+ N++SLASTITTV+GE ATG+G A+LD+ ARQ+LRGV+V + WRV+LHD++G ++ DT LD +I L PI+ ++P+ P QEV++E + W K HNLPWRK +R+SLR++LK ++R L G+ G RYD+ D LIVTVSLP++RVQQVLGVVTVES+DV SIV AER+ALAPIIGLAFLA L+S+ALTLFI+LP+R+LARAAE+VTRS++KR AIPDLS RRDEIGDLS V+R+MTEGLY RIDDIANFAADVAHEIKNPLTSLRS
Sbjct: 33 RSLLTSRLTRNIFFSNLIGLIILVGGSLAMERFQNGLIEAKIENLESLASTITTVMGEDATGYGSAARLDIQNARQVLRGVSVPDRWRVRLHDRAGQILVDTESLDDTIDVGILDPIVTEIPELPRQEVFKEKVTFWISDKAHNLPWRKRRRDSLRRDLKADIRTALQGDSMFGQRYDDEDKLIVTVSLPVKRVQQVLGVVTVESSDVDSIVNAERKALAPIIGLAFLATLLSSMALTLFITLPMRKLARAAELVTRSSRKRGAIPDLSNRRDEIGDLSSVMREMTEGLYARIDDIANFAADVAHEIKNPLTSLRS 348
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A8J3CPK1_9PROT (Histidine kinase n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CPK1_9PROT) HSP 1 Score: 346 bits (888), Expect = 1.010e-112 Identity = 194/320 (60.62%), Postives = 242/320 (75.62%), Query Frame = 1
Query: 1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKL----HNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
R L +SRLT+ I +NLIGL+ILV GSLAMNRFE GLI+ KV N+ SLA+TITTV+G++ATG G ++LD+D A+Q+LRG+NV EGWRV+LHD++G +VADT +LD I L PI + E+ + NI ++ LPWR+A R+ LR++LK ++R L GE SG RYD +D LIV + P+ RVQQVLG VTVES+DV+ IV AER+ALAPIIGLA +A L+S AL LFI+LP+R+LARAAE V R+ Q + IPDLS RRDEIGDLS+VLRDMT GLY+R+DDIANFAADVAHEIKNPLTSLRS
Sbjct: 22 RFLLSSRLTQLILAANLIGLSILVIGSLAMNRFEEGLIDGKVDNLNSLAATITTVMGDRATGSGQASELDIDKAKQVLRGINVPEGWRVRLHDRAGHVVADTAQLDDRIVVGTLDPI---RTEETVAELPKGNISETLGARVLSATQKLPWRQAHRDRLRRDLKADIRTALTGEPVSGARYDIDDTLIVMATQPVYRVQQVLGTVTVESSDVSGIVNAERRALAPIIGLALIAALLSSFALILFITLPMRKLARAAERVARNPQDFETIPDLSHRRDEIGDLSVVLRDMTRGLYSRVDDIANFAADVAHEIKNPLTSLRS 338
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A7C5LZK7_9PROT (Histidine kinase (Fragment) n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7C5LZK7_9PROT) HSP 1 Score: 310 bits (793), Expect = 1.580e-99 Identity = 171/311 (54.98%), Postives = 232/311 (74.60%), Query Frame = 1
Query: 16 SRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
S L R IF+SNL+GL IL+ G+L +N+F GLINAKV N++S IT ++G+QATG G A+LD + ARQI+R +++ + RV+L+DKSG LVAD++ LD S+ L PI+ + +E W ++NW D K+++LP K R S +++L+ +++ L G+ + +Y END L+V V++P++RVQ V G V E++DV +I+ ++R+ L PII +A LA L+SLALTLFI+LP+R+LARAAE V RS+ KR+AIPDLS R DEIGDLS+VLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS
Sbjct: 34 SSLARVIFISNLVGLMILIIGALTLNQFSRGLINAKVENLKSQTRLITNLLGDQATGLGAVAKLDENAARQIMRRIDLPDKARVRLYDKSGILVADSDLLDDSVEVGVLDPIVPEDETIEEKEEWWVRLQNWLDKKVNDLPVYKKHRLSKQRHLERDIKTALLGDTIASEQY-ENDKLLVAVTMPVKRVQDVQGAVVFETHDVDTILASQRRGLTPIILIAVLASILSSLALTLFIALPVRKLARAAEQVRRSSDKRNAIPDLSGRGDEIGDLSVVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 343
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A520XUR9_9ACTN (Histidine kinase n=2 Tax=Bacteria TaxID=2 RepID=A0A520XUR9_9ACTN) HSP 1 Score: 311 bits (796), Expect = 9.190e-99 Identity = 171/311 (54.98%), Postives = 229/311 (73.63%), Query Frame = 1
Query: 16 SRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
S LTR IFL+NL GL IL+ G+L +N+F GLI+AK+ N+ S A IT ++G+QA+G G TA LD + A +I+R ++V E R++L+DK+ +L+AD+ LD S+ L PII D +E W ++NW D ++++LP K RE ++ L +++ L G+ +G +Y E DNLIV+V++P++RVQ VLG V E++DV +I+ ++R+ L PII +A +A L+SLALTLFI+LP+RRLARAAE V RS+ KRD IPDLS R DEIGDLSLVLRDMT GLYNRIDDIANFAADVAHEIKNPLTSLRS
Sbjct: 32 STLTRMIFLANLFGLIILIIGALTLNQFSRGLIDAKIDNLSSQARLITNLLGDQASGLGSTAILDEEAALRIMRRIDVPEKARIRLYDKNSSLIADSELLDDSVEVGTLDPIITDETPVEPKEEWWVQLQNWTDSRVNDLPVFKRHREGKQRRLTRDIKTALLGDTVAGEQY-EGDNLIVSVAIPVKRVQDVLGAVVFETSDVDTILASQRRGLTPIILIAIMAAILSSLALTLFIALPIRRLARAAEQVRRSSDKRDVIPDLSSRSDEIGDLSLVLRDMTAGLYNRIDDIANFAADVAHEIKNPLTSLRS 341
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A2G2R0L5_9PROT (Histidine kinase n=3 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2R0L5_9PROT) HSP 1 Score: 300 bits (768), Expect = 1.120e-94 Identity = 168/318 (52.83%), Postives = 236/318 (74.21%), Query Frame = 1
Query: 1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWR--KAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
R + S LTR IFL+NL+GL IL+AG+L +N+F GLINAK+ N+ S IT +IG+QATG T QLD + AR+I+ ++V + R++L+DK+GT+VAD+NRLD+S+ +L P+I L +E W +++W+D +++ WR + RE+ ++ L+ +V++ L G+ SG +Y E LIV V++P++RV+ + GV+ E++DV +I+ ++RQ L PII +A LA L++L+LTLFI+LP+RRLARAAE V RS+ KRD IPDLS RRDEIGDLS+VLR+MT+GLY RIDDIA FAADVAHEIKNPLTSLRS
Sbjct: 23 RFIMFSTLTRMIFLANLLGLIILIAGALTLNQFSRGLINAKIDNLHSQTRLITNLIGDQATGVEVTPQLDKNEARRIIARIDVPDKARIRLYDKNGTIVADSNRLDSSVEVGQLDPVINYLGPLKRKEPWWVTLQSWSDEWVNS--WRVFRKNRENKQRFLEXDVKSALLGKTVSGEQY-EGRKLIVAVAMPVKRVEDIQGVLVFETHDVDTILASQRQGLTPIILIAILASVLSALSLTLFIALPIRRLARAAEQVVRSSDKRDIIPDLSERRDEIGDLSIVLREMTDGLYTRIDDIAKFAADVAHEIKNPLTSLRS 337
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A2G2IZU0_9PROT (Histidine kinase n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2IZU0_9PROT) HSP 1 Score: 294 bits (752), Expect = 3.910e-92 Identity = 163/316 (51.58%), Postives = 230/316 (72.78%), Query Frame = 1
Query: 1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
R ++ S LTR IFL+NL+GL IL+ G+LA+N+F GLI AK+ ++ S IT ++G+QATG G A LD AR+I+ G+++ E RV+L+DK+G LV+D+ LD + + L PI+ D P + W ++NW D ++++ P K R+ L+++L+ ++++ L G + + +Y E D LIV V+LP++RV+++LGVV E++DV +I+ ++RQ L PII LA LA L+SLALTLFI+LP+R+LARA E V S++KRD IPDLS R DEIGDLSL LR MT G+Y+R+DDIANFAADVAHEIKNPLTSLRS
Sbjct: 17 RFIFFSTLTRMIFLANLLGLIILIIGALALNQFSRGLIEAKIDSLTSQTRLITNLLGDQATGEEGMAVLDEVAARRIIAGIDLPEKARVRLYDKNGRLVSDSALLDDRVETGTLDPIV-DTPQAQPRVKWWVRLQNWTDARVNDFPVYKKHRQRLQRHLERDIKSALRGNVVAAEQY-EGDALIVAVALPVKRVREILGVVVFETHDVDTILASQRQGLTPIILLAILASLLSSLALTLFIALPVRKLARATEQVLSSSEKRDTIPDLSARGDEIGDLSLALRVMTAGMYSRVDDIANFAADVAHEIKNPLTSLRS 330
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A2G2GHY3_9PROT (Histidine kinase n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GHY3_9PROT) HSP 1 Score: 287 bits (735), Expect = 2.130e-89 Identity = 166/320 (51.88%), Postives = 222/320 (69.38%), Query Frame = 1
Query: 1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPI--IEDLPDRPTQE--VWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
R L+ S LTR IFL+NL GL IL+ G+LA+N+F LI+AKV N+ S IT ++G+QATG G LD D I+R +++ RV+++DK+ L++D+ LD SI LGP+ I L R W +++W D K++NLP K R+ L++NL+ ++R L G SG +Y E D LIVTV+LP++RVQ+VLGVV E+ DV +I+ ++R +L PII +A +A L+S ALT+FI+LP+R+LARA + V S K IPDLS RRDEIGDLS+ LRDMTEG++NRIDDIANFAADVAHEIKNPLTSLRS
Sbjct: 17 RFLFFSTLTRMIFLANLCGLIILIVGALALNQFSRELIHAKVDNLTSQTRLITNILGDQATGIDGVPVLDEDAVNAIIRRIDLPTKARVRVYDKNAKLISDSALLDASIEVSVLGPVTPIGQLGSRREHHGNQWWAKLQSWIDIKINNLPVYKKHRQELQRNLQKDIRLALRGNGISGEQY-EGDALIVTVALPVKRVQEVLGVVVFETRDVDAILASQRNSLTPIILIAIIASILSSFALTMFIALPIRKLARATDEVLSSTHKGATIPDLSARRDEIGDLSIALRDMTEGMHNRIDDIANFAADVAHEIKNPLTSLRS 335
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A848V4S8_9PROT (Histidine kinase n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V4S8_9PROT) HSP 1 Score: 286 bits (731), Expect = 4.130e-89 Identity = 162/321 (50.47%), Postives = 224/321 (69.78%), Query Frame = 1
Query: 1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRE-----NIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
RS+ SRLTR IFLS+L GL IL+ GSL +N++ GLI A++ N++S A +T+++G+ ATGFG AQLD+D AR I+ +++ WR++LHD L+ D+ ++ I+ EL P+ D Q++ + ++RN+ L +LPWRK R++ R++L+ E+R L GE S +YD D IVTVS P++RVQ++LGVVT+ES DV I+ ER +L P IG A A ++S+ALT+ I PLR L+RAA++V R+ +K D IPD S R+DEIGDLSL+L +MT GLY+RIDDIANFAADVAHEIKNPLTSLRS
Sbjct: 40 RSILFSRLTRVIFLSHLFGLVILMVGSLTLNQYSKGLIEARIENLKSQALLVTSIMGDTATGFGADAQLDIDKARIIIGRLDLPPEWRLRLHDTGQNLLVDSEQIGADISVGELPPL-----DTGAQKIIKSADAKFSMRNF----LKSLPWRKRARDNNRRDLQAELRRALLGETVSEEKYDSEDRHIVTVSTPVKRVQEILGVVTLESYDVEDIIDQERLSLLPFIGWAIFASLISSIALTMSIVFPLRDLSRAAQVVARTNKKVDQIPDFSYRKDEIGDLSLMLGEMTRGLYSRIDDIANFAADVAHEIKNPLTSLRS 351 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig105549.760.1 >prot_P-canaliculata_contig105549.760.1 ID=prot_P-canaliculata_contig105549.760.1|Name=mRNA_P-canaliculata_contig105549.760.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=316bp RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASback to top mRNA from alignment at P-canaliculata_contig105549:1..948+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig105549.760.1 ID=mRNA_P-canaliculata_contig105549.760.1|Name=mRNA_P-canaliculata_contig105549.760.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=948bp|location=Sequence derived from alignment at P-canaliculata_contig105549:1..948+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig105549:1..948+ >mRNA_P-canaliculata_contig105549.760.1 ID=mRNA_P-canaliculata_contig105549.760.1|Name=mRNA_P-canaliculata_contig105549.760.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1896bp|location=Sequence derived from alignment at P-canaliculata_contig105549:1..948+ (Pelvetia canaliculata dioecious)back to top |