mRNA_P-canaliculata_contig105549.760.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig105549.760.1
Unique NamemRNA_P-canaliculata_contig105549.760.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: UPI00167BAC6B (sensor N-terminal transmembrane domain-containing protein n=2 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00167BAC6B)

HSP 1 Score: 479 bits (1234), Expect = 4.630e-165
Identity = 250/316 (79.11%), Postives = 286/316 (90.51%), Query Frame = 1
Query:    1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
            RSLWTSRLTR IFLSNL+GL ILV+G LAMNRFE+GLINAKV NIQ+L+STITTVIGEQATG+GGTA+LD++GA Q+LRGVNV +GWRV+LHDK+G LVADT  L  +I +E L PI+ED+P+RP Q+VWRENIR W +  LH+LPWRKA+RE+LR++LK E+RAGL G+ + GPRYD NDNLIVTVS P+QRVQQVLGVVTVES+DV+SIV   RQAL PIIGLAFLAMFL+SLALTLFISLP+RRLARAAEIVTRSA+KRDAIPDLS RRDEIGDLSLVLRDMT+GLY+RIDDIANFAADVAHEIKNPLTSLRS
Sbjct:   27 RSLWTSRLTRNIFLSNLVGLIILVSGMLAMNRFETGLINAKVDNIQTLSSTITTVIGEQATGYGGTAELDIEGASQVLRGVNVPDGWRVRLHDKAGQLVADTLTLSDTIITESLDPILEDIPERPKQDVWRENIRGWMNKTLHDLPWRKARRETLRRDLKSEIRAGLEGDSSYGPRYDANDNLIVTVSQPVQRVQQVLGVVTVESSDVSSIVNDARQALIPIIGLAFLAMFLSSLALTLFISLPMRRLARAAEIVTRSAKKRDAIPDLSARRDEIGDLSLVLRDMTQGLYSRIDDIANFAADVAHEIKNPLTSLRS 342          
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A420WII3_9PROT (Histidine kinase n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WII3_9PROT)

HSP 1 Score: 421 bits (1082), Expect = 6.990e-142
Identity = 220/316 (69.62%), Postives = 268/316 (84.81%), Query Frame = 1
Query:    1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
            R L++SRLT+ IF SNLIGL ILV+GSLAMNRFES LI AKV N+ SLA+TITTVIGEQATGFG  A+LD+DGA+Q+LRGVNV  GWRV+LHD+SG +VADT RLD +IT   L PII +   +   EVW+E ++ W  + + NLPWRKAKR   R++L+ +VR+ L+GE + GPRYD+ DNLIV+VS+P+QRVQQVLGVVTVESNDV +IV+AER+ALAPIIGLA LA  L+SLALTLFI+LP+R+L+ AAE+V+RS+ KRDAIPDLS+RRDEIGDLS ++R+MT GLY+RIDDIANFAADVAHEIKNPLTSLRS
Sbjct:   34 RRLFSSRLTQVIFFSNLIGLLILVSGSLAMNRFESSLIEAKVDNLHSLAATITTVIGEQATGFGSAAKLDIDGAKQVLRGVNVPSGWRVRLHDRSGGVVADTERLDDTITISPLDPIIPEQEPQKNYEVWKEELQEWTQNHIQNLPWRKAKRNHFRRDLRADVRSALSGEKSMGPRYDDKDNLIVSVSVPVQRVQQVLGVVTVESNDVGNIVSAERKALAPIIGLAVLAALLSSLALTLFITLPMRKLSIAAEVVSRSSDKRDAIPDLSKRRDEIGDLSSMMREMTLGLYSRIDDIANFAADVAHEIKNPLTSLRS 349          
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: UPI0003F7E84E (sensor N-terminal transmembrane domain-containing protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0003F7E84E)

HSP 1 Score: 409 bits (1052), Expect = 4.030e-137
Identity = 215/316 (68.04%), Postives = 262/316 (82.91%), Query Frame = 1
Query:    1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
            RSL TSRLTR IF SNLIGL ILV GSLAM RF++GLI AK+ N++SLASTITTV+GE ATG+G  A+LD+  ARQ+LRGV+V + WRV+LHD++G ++ DT  LD +I    L PI+ ++P+ P QEV++E +  W   K HNLPWRK +R+SLR++LK ++R  L G+   G RYD+ D LIVTVSLP++RVQQVLGVVTVES+DV SIV AER+ALAPIIGLAFLA  L+S+ALTLFI+LP+R+LARAAE+VTRS++KR AIPDLS RRDEIGDLS V+R+MTEGLY RIDDIANFAADVAHEIKNPLTSLRS
Sbjct:   33 RSLLTSRLTRNIFFSNLIGLIILVGGSLAMERFQNGLIEAKIENLESLASTITTVMGEDATGYGSAARLDIQNARQVLRGVSVPDRWRVRLHDRAGQILVDTESLDDTIDVGILDPIVTEIPELPRQEVFKEKVTFWISDKAHNLPWRKRRRDSLRRDLKADIRTALQGDSMFGQRYDDEDKLIVTVSLPVKRVQQVLGVVTVESSDVDSIVNAERKALAPIIGLAFLATLLSSMALTLFITLPMRKLARAAELVTRSSRKRGAIPDLSNRRDEIGDLSSVMREMTEGLYARIDDIANFAADVAHEIKNPLTSLRS 348          
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A8J3CPK1_9PROT (Histidine kinase n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CPK1_9PROT)

HSP 1 Score: 346 bits (888), Expect = 1.010e-112
Identity = 194/320 (60.62%), Postives = 242/320 (75.62%), Query Frame = 1
Query:    1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKL----HNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
            R L +SRLT+ I  +NLIGL+ILV GSLAMNRFE GLI+ KV N+ SLA+TITTV+G++ATG G  ++LD+D A+Q+LRG+NV EGWRV+LHD++G +VADT +LD  I    L PI     +    E+ + NI      ++      LPWR+A R+ LR++LK ++R  L GE  SG RYD +D LIV  + P+ RVQQVLG VTVES+DV+ IV AER+ALAPIIGLA +A  L+S AL LFI+LP+R+LARAAE V R+ Q  + IPDLS RRDEIGDLS+VLRDMT GLY+R+DDIANFAADVAHEIKNPLTSLRS
Sbjct:   22 RFLLSSRLTQLILAANLIGLSILVIGSLAMNRFEEGLIDGKVDNLNSLAATITTVMGDRATGSGQASELDIDKAKQVLRGINVPEGWRVRLHDRAGHVVADTAQLDDRIVVGTLDPI---RTEETVAELPKGNISETLGARVLSATQKLPWRQAHRDRLRRDLKADIRTALTGEPVSGARYDIDDTLIVMATQPVYRVQQVLGTVTVESSDVSGIVNAERRALAPIIGLALIAALLSSFALILFITLPMRKLARAAERVARNPQDFETIPDLSHRRDEIGDLSVVLRDMTRGLYSRVDDIANFAADVAHEIKNPLTSLRS 338          
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A7C5LZK7_9PROT (Histidine kinase (Fragment) n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7C5LZK7_9PROT)

HSP 1 Score: 310 bits (793), Expect = 1.580e-99
Identity = 171/311 (54.98%), Postives = 232/311 (74.60%), Query Frame = 1
Query:   16 SRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
            S L R IF+SNL+GL IL+ G+L +N+F  GLINAKV N++S    IT ++G+QATG G  A+LD + ARQI+R +++ +  RV+L+DKSG LVAD++ LD S+    L PI+ +      +E W   ++NW D K+++LP  K  R S +++L+ +++  L G+  +  +Y END L+V V++P++RVQ V G V  E++DV +I+ ++R+ L PII +A LA  L+SLALTLFI+LP+R+LARAAE V RS+ KR+AIPDLS R DEIGDLS+VLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS
Sbjct:   34 SSLARVIFISNLVGLMILIIGALTLNQFSRGLINAKVENLKSQTRLITNLLGDQATGLGAVAKLDENAARQIMRRIDLPDKARVRLYDKSGILVADSDLLDDSVEVGVLDPIVPEDETIEEKEEWWVRLQNWLDKKVNDLPVYKKHRLSKQRHLERDIKTALLGDTIASEQY-ENDKLLVAVTMPVKRVQDVQGAVVFETHDVDTILASQRRGLTPIILIAVLASILSSLALTLFIALPVRKLARAAEQVRRSSDKRNAIPDLSGRGDEIGDLSVVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 343          
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A520XUR9_9ACTN (Histidine kinase n=2 Tax=Bacteria TaxID=2 RepID=A0A520XUR9_9ACTN)

HSP 1 Score: 311 bits (796), Expect = 9.190e-99
Identity = 171/311 (54.98%), Postives = 229/311 (73.63%), Query Frame = 1
Query:   16 SRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
            S LTR IFL+NL GL IL+ G+L +N+F  GLI+AK+ N+ S A  IT ++G+QA+G G TA LD + A +I+R ++V E  R++L+DK+ +L+AD+  LD S+    L PII D      +E W   ++NW D ++++LP  K  RE  ++ L  +++  L G+  +G +Y E DNLIV+V++P++RVQ VLG V  E++DV +I+ ++R+ L PII +A +A  L+SLALTLFI+LP+RRLARAAE V RS+ KRD IPDLS R DEIGDLSLVLRDMT GLYNRIDDIANFAADVAHEIKNPLTSLRS
Sbjct:   32 STLTRMIFLANLFGLIILIIGALTLNQFSRGLIDAKIDNLSSQARLITNLLGDQASGLGSTAILDEEAALRIMRRIDVPEKARIRLYDKNSSLIADSELLDDSVEVGTLDPIITDETPVEPKEEWWVQLQNWTDSRVNDLPVFKRHREGKQRRLTRDIKTALLGDTVAGEQY-EGDNLIVSVAIPVKRVQDVLGAVVFETSDVDTILASQRRGLTPIILIAIMAAILSSLALTLFIALPIRRLARAAEQVRRSSDKRDVIPDLSSRSDEIGDLSLVLRDMTAGLYNRIDDIANFAADVAHEIKNPLTSLRS 341          
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A2G2R0L5_9PROT (Histidine kinase n=3 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2R0L5_9PROT)

HSP 1 Score: 300 bits (768), Expect = 1.120e-94
Identity = 168/318 (52.83%), Postives = 236/318 (74.21%), Query Frame = 1
Query:    1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWR--KAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
            R +  S LTR IFL+NL+GL IL+AG+L +N+F  GLINAK+ N+ S    IT +IG+QATG   T QLD + AR+I+  ++V +  R++L+DK+GT+VAD+NRLD+S+   +L P+I  L     +E W   +++W+D  +++  WR  +  RE+ ++ L+ +V++ L G+  SG +Y E   LIV V++P++RV+ + GV+  E++DV +I+ ++RQ L PII +A LA  L++L+LTLFI+LP+RRLARAAE V RS+ KRD IPDLS RRDEIGDLS+VLR+MT+GLY RIDDIA FAADVAHEIKNPLTSLRS
Sbjct:   23 RFIMFSTLTRMIFLANLLGLIILIAGALTLNQFSRGLINAKIDNLHSQTRLITNLIGDQATGVEVTPQLDKNEARRIIARIDVPDKARIRLYDKNGTIVADSNRLDSSVEVGQLDPVINYLGPLKRKEPWWVTLQSWSDEWVNS--WRVFRKNRENKQRFLEXDVKSALLGKTVSGEQY-EGRKLIVAVAMPVKRVEDIQGVLVFETHDVDTILASQRQGLTPIILIAILASVLSALSLTLFIALPIRRLARAAEQVVRSSDKRDIIPDLSERRDEIGDLSIVLREMTDGLYTRIDDIAKFAADVAHEIKNPLTSLRS 337          
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A2G2IZU0_9PROT (Histidine kinase n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2IZU0_9PROT)

HSP 1 Score: 294 bits (752), Expect = 3.910e-92
Identity = 163/316 (51.58%), Postives = 230/316 (72.78%), Query Frame = 1
Query:    1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
            R ++ S LTR IFL+NL+GL IL+ G+LA+N+F  GLI AK+ ++ S    IT ++G+QATG  G A LD   AR+I+ G+++ E  RV+L+DK+G LV+D+  LD  + +  L PI+ D P    +  W   ++NW D ++++ P  K  R+ L+++L+ ++++ L G + +  +Y E D LIV V+LP++RV+++LGVV  E++DV +I+ ++RQ L PII LA LA  L+SLALTLFI+LP+R+LARA E V  S++KRD IPDLS R DEIGDLSL LR MT G+Y+R+DDIANFAADVAHEIKNPLTSLRS
Sbjct:   17 RFIFFSTLTRMIFLANLLGLIILIIGALALNQFSRGLIEAKIDSLTSQTRLITNLLGDQATGEEGMAVLDEVAARRIIAGIDLPEKARVRLYDKNGRLVSDSALLDDRVETGTLDPIV-DTPQAQPRVKWWVRLQNWTDARVNDFPVYKKHRQRLQRHLERDIKSALRGNVVAAEQY-EGDALIVAVALPVKRVREILGVVVFETHDVDTILASQRQGLTPIILLAILASLLSSLALTLFIALPVRKLARATEQVLSSSEKRDTIPDLSARGDEIGDLSLALRVMTAGMYSRVDDIANFAADVAHEIKNPLTSLRS 330          
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A2G2GHY3_9PROT (Histidine kinase n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GHY3_9PROT)

HSP 1 Score: 287 bits (735), Expect = 2.130e-89
Identity = 166/320 (51.88%), Postives = 222/320 (69.38%), Query Frame = 1
Query:    1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPI--IEDLPDRPTQE--VWRENIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
            R L+ S LTR IFL+NL GL IL+ G+LA+N+F   LI+AKV N+ S    IT ++G+QATG  G   LD D    I+R +++    RV+++DK+  L++D+  LD SI    LGP+  I  L  R       W   +++W D K++NLP  K  R+ L++NL+ ++R  L G   SG +Y E D LIVTV+LP++RVQ+VLGVV  E+ DV +I+ ++R +L PII +A +A  L+S ALT+FI+LP+R+LARA + V  S  K   IPDLS RRDEIGDLS+ LRDMTEG++NRIDDIANFAADVAHEIKNPLTSLRS
Sbjct:   17 RFLFFSTLTRMIFLANLCGLIILIVGALALNQFSRELIHAKVDNLTSQTRLITNILGDQATGIDGVPVLDEDAVNAIIRRIDLPTKARVRVYDKNAKLISDSALLDASIEVSVLGPVTPIGQLGSRREHHGNQWWAKLQSWIDIKINNLPVYKKHRQELQRNLQKDIRLALRGNGISGEQY-EGDALIVTVALPVKRVQEVLGVVVFETRDVDAILASQRNSLTPIILIAIIASILSSFALTMFIALPIRKLARATDEVLSSTHKGATIPDLSARRDEIGDLSIALRDMTEGMHNRIDDIANFAADVAHEIKNPLTSLRS 335          
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Match: A0A848V4S8_9PROT (Histidine kinase n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V4S8_9PROT)

HSP 1 Score: 286 bits (731), Expect = 4.130e-89
Identity = 162/321 (50.47%), Postives = 224/321 (69.78%), Query Frame = 1
Query:    1 RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLASTITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVADTNRLDTSITSEELGPIIEDLPDRPTQEVWRE-----NIRNWADHKLHNLPWRKAKRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGVVTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLARAAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFAADVAHEIKNPLTSLRS 948
            RS+  SRLTR IFLS+L GL IL+ GSL +N++  GLI A++ N++S A  +T+++G+ ATGFG  AQLD+D AR I+  +++   WR++LHD    L+ D+ ++   I+  EL P+     D   Q++ +      ++RN+    L +LPWRK  R++ R++L+ E+R  L GE  S  +YD  D  IVTVS P++RVQ++LGVVT+ES DV  I+  ER +L P IG A  A  ++S+ALT+ I  PLR L+RAA++V R+ +K D IPD S R+DEIGDLSL+L +MT GLY+RIDDIANFAADVAHEIKNPLTSLRS
Sbjct:   40 RSILFSRLTRVIFLSHLFGLVILMVGSLTLNQYSKGLIEARIENLKSQALLVTSIMGDTATGFGADAQLDIDKARIIIGRLDLPPEWRLRLHDTGQNLLVDSEQIGADISVGELPPL-----DTGAQKIIKSADAKFSMRNF----LKSLPWRKRARDNNRRDLQAELRRALLGETVSEEKYDSEDRHIVTVSTPVKRVQEILGVVTLESYDVEDIIDQERLSLLPFIGWAIFASLISSIALTMSIVFPLRDLSRAAQVVARTNKKVDQIPDFSYRKDEIGDLSLMLGEMTRGLYSRIDDIANFAADVAHEIKNPLTSLRS 351          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig105549.760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00167BAC6B4.630e-16579.11sensor N-terminal transmembrane domain-containing ... [more]
A0A420WII3_9PROT6.990e-14269.62Histidine kinase n=1 Tax=Litorimonas taeanensis Ta... [more]
UPI0003F7E84E4.030e-13768.04sensor N-terminal transmembrane domain-containing ... [more]
A0A8J3CPK1_9PROT1.010e-11260.63Histidine kinase n=1 Tax=Algimonas arctica TaxID=1... [more]
A0A7C5LZK7_9PROT1.580e-9954.98Histidine kinase (Fragment) n=1 Tax=Hellea balneol... [more]
A0A520XUR9_9ACTN9.190e-9954.98Histidine kinase n=2 Tax=Bacteria TaxID=2 RepID=A0... [more]
A0A2G2R0L5_9PROT1.120e-9452.83Histidine kinase n=3 Tax=Robiginitomaculum sp. Tax... [more]
A0A2G2IZU0_9PROT3.910e-9251.58Histidine kinase n=1 Tax=Robiginitomaculum sp. Tax... [more]
A0A2G2GHY3_9PROT2.130e-8951.88Histidine kinase n=1 Tax=Robiginitomaculum sp. Tax... [more]
A0A848V4S8_9PROT4.130e-8950.47Histidine kinase n=1 Tax=Hellea sp. TaxID=2715692 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig105549contigP-canaliculata_contig105549:1..948 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score413.7
Seed ortholog evalue7.8e-113
Seed eggNOG ortholog1121948.AUAC01000002_gene1760
EggNOG free text desc.PhoQ Sensor
EggNOG OGs1N17V@1224,2TS69@28211,440U1@69657,COG0642@1,COG2205@2
COG Functional cat.T
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons1
Model size948
Cds size948
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815626.9313443-CDS-P-canaliculata_contig105549:0..9481622815626.9313443-CDS-P-canaliculata_contig105549:0..948Pelvetia canaliculata dioeciousCDSP-canaliculata_contig105549 1..948 +
1693494174.0289557-CDS-P-canaliculata_contig105549:0..9481693494174.0289557-CDS-P-canaliculata_contig105549:0..948Pelvetia canaliculata dioeciousCDSP-canaliculata_contig105549 1..948 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig105549.760.1prot_P-canaliculata_contig105549.760.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig105549 1..948 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig105549.760.1

>prot_P-canaliculata_contig105549.760.1 ID=prot_P-canaliculata_contig105549.760.1|Name=mRNA_P-canaliculata_contig105549.760.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=316bp
RSLWTSRLTRAIFLSNLIGLTILVAGSLAMNRFESGLINAKVHNIQSLAS
TITTVIGEQATGFGGTAQLDVDGARQILRGVNVQEGWRVQLHDKSGTLVA
DTNRLDTSITSEELGPIIEDLPDRPTQEVWRENIRNWADHKLHNLPWRKA
KRESLRQNLKMEVRAGLNGEITSGPRYDENDNLIVTVSLPIQRVQQVLGV
VTVESNDVASIVTAERQALAPIIGLAFLAMFLTSLALTLFISLPLRRLAR
AAEIVTRSAQKRDAIPDLSRRRDEIGDLSLVLRDMTEGLYNRIDDIANFA
ADVAHEIKNPLTSLRS
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mRNA from alignment at P-canaliculata_contig105549:1..948+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig105549.760.1 ID=mRNA_P-canaliculata_contig105549.760.1|Name=mRNA_P-canaliculata_contig105549.760.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=948bp|location=Sequence derived from alignment at P-canaliculata_contig105549:1..948+ (Pelvetia canaliculata dioecious)
CGTTCCCTATGGACGTCCCGGCTTACGCGGGCCATTTTCCTTTCAAACCT CATCGGGCTGACAATTCTTGTCGCCGGGTCTTTGGCTATGAACCGGTTCG AGTCCGGGCTGATCAACGCCAAGGTCCATAATATCCAATCCCTCGCTTCG ACCATTACAACGGTGATTGGTGAGCAGGCGACAGGCTTTGGCGGAACGGC GCAACTGGATGTCGACGGCGCGCGCCAAATCCTGCGAGGCGTGAATGTGC AAGAGGGTTGGCGGGTCCAGCTCCATGATAAATCCGGCACCTTGGTTGCG GATACCAACCGGTTGGACACGTCCATTACCTCGGAAGAGTTAGGTCCCAT CATTGAAGACCTACCTGATCGCCCTACACAAGAAGTCTGGCGGGAAAACA TTCGCAATTGGGCTGATCACAAGCTGCATAATCTACCGTGGCGCAAGGCC AAGCGGGAGAGCTTGAGGCAAAATTTAAAGATGGAAGTGCGCGCCGGACT GAACGGCGAGATCACATCCGGCCCGCGTTATGACGAAAACGACAATCTGA TCGTCACCGTATCTTTGCCCATTCAACGTGTTCAACAAGTCCTCGGGGTT GTTACCGTGGAGAGTAATGACGTCGCCTCTATCGTGACAGCCGAACGTCA AGCCTTGGCGCCGATTATTGGGCTCGCTTTTCTGGCGATGTTTTTGACGT CCTTAGCTCTCACATTATTTATCAGCCTGCCGTTGCGCAGGCTCGCGCGC GCCGCTGAAATCGTGACGCGCAGCGCGCAAAAGCGAGACGCCATTCCGGA CCTATCCAGACGCCGCGATGAGATCGGCGATTTGTCTCTTGTTCTGCGGG ACATGACGGAAGGACTCTATAACCGGATTGATGACATTGCGAATTTCGCG GCAGATGTGGCGCATGAAATTAAAAACCCTTTGACAAGCCTGCGTTCG
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Coding sequence (CDS) from alignment at P-canaliculata_contig105549:1..948+

>mRNA_P-canaliculata_contig105549.760.1 ID=mRNA_P-canaliculata_contig105549.760.1|Name=mRNA_P-canaliculata_contig105549.760.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1896bp|location=Sequence derived from alignment at P-canaliculata_contig105549:1..948+ (Pelvetia canaliculata dioecious)
CGTTCCCTATGGACGTCCCGGCTTACGCGGGCCATTTTCCTTTCAAACCT
CATCGGGCTGACAATTCTTGTCGCCGGGTCTTTGGCTATGAACCGGTTCG
AGTCCGGGCTGATCAACGCCAAGGTCCATAATATCCAATCCCTCGCTTCG
ACCATTACAACGGTGATTGGTGAGCAGGCGACAGGCTTTGGCGGAACGGC
GCAACTGGATGTCGACGGCGCGCGCCAAATCCTGCGAGGCGTGAATGTGC
AAGAGGGTTGGCGGGTCCAGCTCCATGATAAATCCGGCACCTTGGTTGCG
GATACCAACCGGTTGGACACGTCCATTACCTCGGAAGAGTTAGGTCCCAT
CATTGAAGACCTACCTGATCGCCCTACACAAGAAGTCTGGCGGGAAAACA
TTCGCAATTGGGCTGATCACAAGCTGCATAATCTACCGTGGCGCAAGGCC
AAGCGGGAGAGCTTGAGGCAAAATTTAAAGATGGAAGTGCGCGCCGGACT
GAACGGCGAGATCACATCCGGCCCGCGTTATGACGAAAACGACAATCTGA
TCGTCACCGTATCTTTGCCCATTCAACGTGTTCAACAAGTCCTCGGGGTT
GTTACCGTGGAGAGTAATGACGTCGCCTCTATCGTGACAGCCGAACGTCA
AGCCTTGGCGCCGATTATTGGGCTCGCTTTTCTGGCGATGTTTTTGACGT
CCTTAGCTCTCACATTATTTATCAGCCTGCCGTTGCGCAGGCTCGCGCGC
GCCGCTGAAATCGTGACGCGCAGCGCGCAAAAGCGAGACGCCATTCCGGA
CCTATCCAGACGCCGCGATGAGATCGGCGATTTGTCTCTTGTTCTGCGGG
ACATGACGGAAGGACTCTATAACCGGATTGATGACATTGCGAATTTCGCG
GCAGATGTGGCGCATGAAATTAAAAACCCTTTGACAAGCCTGCGTTCGCG
TTCCCTATGGACGTCCCGGCTTACGCGGGCCATTTTCCTTTCAAACCTCA
TCGGGCTGACAATTCTTGTCGCCGGGTCTTTGGCTATGAACCGGTTCGAG
TCCGGGCTGATCAACGCCAAGGTCCATAATATCCAATCCCTCGCTTCGAC
CATTACAACGGTGATTGGTGAGCAGGCGACAGGCTTTGGCGGAACGGCGC
AACTGGATGTCGACGGCGCGCGCCAAATCCTGCGAGGCGTGAATGTGCAA
GAGGGTTGGCGGGTCCAGCTCCATGATAAATCCGGCACCTTGGTTGCGGA
TACCAACCGGTTGGACACGTCCATTACCTCGGAAGAGTTAGGTCCCATCA
TTGAAGACCTACCTGATCGCCCTACACAAGAAGTCTGGCGGGAAAACATT
CGCAATTGGGCTGATCACAAGCTGCATAATCTACCGTGGCGCAAGGCCAA
GCGGGAGAGCTTGAGGCAAAATTTAAAGATGGAAGTGCGCGCCGGACTGA
ACGGCGAGATCACATCCGGCCCGCGTTATGACGAAAACGACAATCTGATC
GTCACCGTATCTTTGCCCATTCAACGTGTTCAACAAGTCCTCGGGGTTGT
TACCGTGGAGAGTAATGACGTCGCCTCTATCGTGACAGCCGAACGTCAAG
CCTTGGCGCCGATTATTGGGCTCGCTTTTCTGGCGATGTTTTTGACGTCC
TTAGCTCTCACATTATTTATCAGCCTGCCGTTGCGCAGGCTCGCGCGCGC
CGCTGAAATCGTGACGCGCAGCGCGCAAAAGCGAGACGCCATTCCGGACC
TATCCAGACGCCGCGATGAGATCGGCGATTTGTCTCTTGTTCTGCGGGAC
ATGACGGAAGGACTCTATAACCGGATTGATGACATTGCGAATTTCGCGGC
AGATGTGGCGCATGAAATTAAAAACCCTTTGACAAGCCTGCGTTCG
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