mRNA_P-canaliculata_contig10526.714.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Match: A0A4U0XEJ0_9PEZI (Mitochondrial inner membrane protease subunit n=1 Tax=Friedmanniomyces simplex TaxID=329884 RepID=A0A4U0XEJ0_9PEZI) HSP 1 Score: 140 bits (352), Expect = 4.620e-38 Identity = 87/200 (43.50%), Postives = 114/200 (57.00%), Query Frame = 1
Query: 10 PTAVL-PLVHRTVFAAAALISLHDHVFAVAPVNGSSMAPALSPDWHARRHRDVVLFWKWDLVLARSPFRAFDPSAPHPVLRRGDVVQLMSPLRPDVFAVKRVVALAGDAV-------PRGSPRQDSRSLAVGADAGADDDGGEEDVVRVVPPGHVWVEGDNARVSVDSKTYGPVSCGLVVARAAVVVWPWNRAGTRPWEG 585
PT L P T++ ALI+L+D++ + + G+SM+P+LSP +H HRD+VL+ KW + + P L+RGD+V SP RPD AVKRVV L GD + P G +SR +A AD GG VV VPPGH+WVEGD R S DS YGP+S LV+ +A +V+WPW R TRPW G
Sbjct: 9 PTKFLYPAATLTLWLTTALITLNDNLVETSFIQGTSMSPSLSPAYHTTGHRDLVLWNKW-ISHSNGPGS----------LKRGDIVLFRSPTRPDCNAVKRVVGLEGDRITLDPQRRPAGDSSPESRVWDA-MEANADPHGGSGGVV--VPPGHIWVEGDFWRKSQDSNAYGPLSKSLVMGKAMLVLWPWERCATRPWVG 194
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Match: A0A4U0UIF1_9PEZI (Mitochondrial inner membrane protease subunit n=2 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4U0UIF1_9PEZI) HSP 1 Score: 136 bits (342), Expect = 1.540e-36 Identity = 83/189 (43.92%), Postives = 106/189 (56.08%), Query Frame = 1
Query: 40 TVFAAAALISLHDHVFAVAPVNGSSMAPALSPDWHARRHRDVVLFWKWDLVLARSPFRAFDPSAPHPVLRRGDVVQLMSPLRPDVFAVKRVVALAGDAV-------PRGSPRQDSRSL-AVGADAGADDDGGEEDVVRVVPPGHVWVEGDNARVSVDSKTYGPVSCGLVVARAAVVVWPWNRAGTRPWE 582
T++ ALI L+D++ + V G+SM+P+L P +H RD VL+ KW D S L+RGD+V SP RPD AVKRVV L GD V P G +SR+ A+ + AG D G PPGH+WVEGD R S DS YGPVS LV+ +A +V+WPW+R GTRPWE
Sbjct: 20 TLWLTIALIPLNDNLIEASFVQGTSMSPSLCPSYHTTGRRDAVLWNKW-----------VDHSNSPKGLKRGDIVLFRSPTRPDCNAVKRVVGLEGDRVFLDPRRRPEGDVSPESRAWDAMASQAG--DFGXXXXXXXXXPPGHIWVEGDYWRKSQDSNAYGPVSKSLVLGKAMLVLWPWDRCGTRPWE 195
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Match: A0A0S6XHT7_BLOB1 (Mitochondrial inner membrane protease subunit n=1 Tax=Fungal sp. (strain No.11243) TaxID=1603295 RepID=A0A0S6XHT7_BLOB1) HSP 1 Score: 121 bits (303), Expect = 3.360e-31 Identity = 81/186 (43.55%), Postives = 95/186 (51.08%), Query Frame = 1
Query: 25 PLVHRTVFAAAALISLHDHVFAVAPVNGSSMAPALSPDWHARRHRDVVLFWKWDLVLARSPFRAFDPSAPHPVLRRGDVVQLMSPLRPDVFAVKRVVALAGDAVPRGSPRQDSRSLAVGADAGADDDGGEEDVVRVVPPGHVWVEGDNARVSVDSKTYGPVSCGLVVARAAVVVWPWNRAGTRPWE 582
PL+ ++A A L+DHV + V GSSM+P LS +H RD +L K+ AP L RGDVV +P RPD VKRVV L GD V R+ GA+ GA VVPPGHVWVEGDN R S DS YGPVS L+ RA VVWP +R RPWE
Sbjct: 7 PLLTLPLWAVATASVLNDHVLEILSVRGSSMSPTLSSLYHDTGARDTLLVRKY---------------APTTGLERGDVVAFWAPHRPDHLVVKRVVGLEGDRVTLDERRRP------GAEFGAR---------VVVPPGHVWVEGDNWRSSGDSNLYGPVSRSLITGRAVCVVWPLSRWWQRPWE 162
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Match: A0A6G1I1E4_9PEZI (Mitochondrial inner membrane protease subunit n=1 Tax=Trichodelitschia bisporula TaxID=703511 RepID=A0A6G1I1E4_9PEZI) HSP 1 Score: 120 bits (301), Expect = 1.180e-30 Identity = 78/180 (43.33%), Postives = 102/180 (56.67%), Query Frame = 1
Query: 37 RTVFAAAALISLHDHVFAVAPVNGSSMAPALSPDWHARRHRDVVLFWKWDLVLARSPFRAFDPSAPHPVLRRGDVVQLMSPLRPDVFAVKRVVALAGDAVPRGSPRQDSRSLAVGADAGADDDGGEEDVVRVVPPGHVWVEGDNARVSVDSKTYGPVSCGLVVARAAVVVWPWNRAGTRP 576
RT+ A A +++++D VF V G+SMAPALSPD++ RD +L K D RS A A L+RGDVV P P+ +VKRVV L GD V R D R + A+AG G + VPPGHV+VEGDN R S DS +GP+ GL+ RA ++WP +RAG+ P
Sbjct: 8 RTLVAGAIVVTVNDRVFDAHVVTGNSMAPALSPDYNLAGRRDAILVRKGDF---RSE-TADSTRATRLTLQRGDVVAFWKPHDPESMSVKRVVGLPGDVVWR-----DMRRVGSEAEAGKRFGMGPQAPAVHVPPGHVFVEGDNWRDSFDSHDFGPIPSGLITGRAVGIIWPPSRAGSVP 178
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Match: A0A074WNU7_9PEZI (Mitochondrial inner membrane protease subunit n=1 Tax=Aureobasidium namibiae CBS 147.97 TaxID=1043004 RepID=A0A074WNU7_9PEZI) HSP 1 Score: 115 bits (289), Expect = 9.730e-29 Identity = 72/187 (38.50%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 55 AALISLHDHVFAVAPVNGSSMAPALSPDWHARRHRDVVLFWKWDLVLARSPFRAFDPSAPHPVLRRGDVVQLMSPLRPDVFAVKRVVALAGDAVP---RGSPRQDSRSLAVGADAGADDDG-GEEDVVRV------VPPGHVWVEGDNARVSVDSKTYGPVSCGLVVARAAVVVWPWNRAGTRPWEG 585
A I+++DH + G SMAP LSP ++ +D++L KW P L+RGDVV L P +P+ +KRV+AL GD V + P++D + + G D GE+ V VP GHVWVEGDNAR S DS TYGPVS L+ +A +WPW R G + W+G
Sbjct: 20 AGTITMNDHFLEPIHIEGISMAPTLSPTFNETGTKDLILMQKWK---------------PTANLQRGDVVMLNLPHKPEKLGIKRVIALEGDWVTLDWKRRPKEDKEGIDGMSKEGMVWDAIGEQKEFGVGKRRWRVPLGHVWVEGDNARASKDSNTYGPVSKSLIAGKAIFCLWPWERFGQKHWDG 191
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Match: A0A6A6GBN3_9PEZI (Mitochondrial inner membrane protease subunit 2 n=2 Tax=Elsinoe TaxID=40996 RepID=A0A6A6GBN3_9PEZI) HSP 1 Score: 115 bits (288), Expect = 1.030e-28 Identity = 72/171 (42.11%), Postives = 90/171 (52.63%), Query Frame = 1
Query: 70 LHDHVFAVAPVNGSSMAPALSPDWHARRHRDVVLFWKWDLVLARSPFRAFDPSAPHPVLRRGDVVQLMSPLRPDVFAVKRVVALAGDAVPRGSPRQDSRSLAVGADAGADDDGGEEDVVRVVPPGHVWVEGDNARVSVDSKTYGPVSCGLVVARAAVVVWPWNRAGTRPWE 582
L+DH V V+G SMAP LSP +H +D +L K ++ L+RGDVV +P + + VKRVV L GD G D + +G + GA VRV PPGHVWVEGDN R S DS YGP+S GL+ +A V+WPW R G RPWE
Sbjct: 33 LNDHFAEVLSVSGRSMAPTLSPLYHETGRKDYLLLRKHNVTTD---------------LKRGDVVAFWAPHKREFLVVKRVVGLEGDLW--GDDPLDLH-MGLGTNKGA---------VRV-PPGHVWVEGDNWRESGDSNFYGPISRGLITGKAICVLWPWERCGERPWE 175
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Match: A0A3M6Y7P5_HORWE (Mitochondrial inner membrane protease subunit n=5 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M6Y7P5_HORWE) HSP 1 Score: 120 bits (300), Expect = 4.160e-28 Identity = 70/173 (40.46%), Postives = 92/173 (53.18%), Query Frame = 1
Query: 76 DHVFAVAPVNGSSMAPALSPDWHARRHRDVVLFWKWDLVLARSPFRAFDPSAPHPVLRRGDVVQLMSPLRPDVFAVKRVVALAGDAV---PRGSPRQDSRSLAVGADAGADDDGGEEDVVRV-VPPGHVWVEGDNARVSVDSKTYGPVSCGLVVARAAVVVWPWNRAGTRPWE 582
D+VF V G SM P LSP + +D VL+ KW++ +RRGD+V P RPD KRV+A GD V PR P+ D+ + G D + RV +PPGHVWVEGDN R + DS YGP+S L+ +A VVWPW+R+G++PWE
Sbjct: 354 DNVFQCTSVTGGSMEPTLSPQDNTTGQKDYVLWNKWEIESK---------------IRRGDIVLFSLPGRPDDHGTKRVIATEGDTVILDPRRRPKDDASGRDLPESTGWD-----MYMRRVEIPPGHVWVEGDNWRKTRDSNWYGPISKSLIQGKATAVVWPWDRSGSKPWE 506
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Match: A0A3M7GXV6_HORWE (Mitochondrial inner membrane protease subunit n=5 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7GXV6_HORWE) HSP 1 Score: 114 bits (285), Expect = 8.310e-28 Identity = 69/170 (40.59%), Postives = 92/170 (54.12%), Query Frame = 1
Query: 76 DHVFAVAPVNGSSMAPALSPDWHARRHRDVVLFWKWDLVLARSPFRAFDPSAPHPVLRRGDVVQLMSPLRPDVFAVKRVVALAGDAVPRGSPRQDSRSLAVGADAGADDDGGEEDVVRV-VPPGHVWVEGDNARVSVDSKTYGPVSCGLVVARAAVVVWPWNRAGTRPWE 582
D+V V G SM P LSP + +D VL+ KW++ +RRGD+V P RPD KRV+A GD V PR+ + A G D + G + RV +PPGHVWVEGDN R + DS YGP+S L+ +A+ VVWPW+R+G++PWE
Sbjct: 60 DNVVQCTSVTGGSMEPTLSPLDNTTGQKDYVLWNKWEIESK---------------IRRGDIVLFSLPGRPDDHGTKRVIATEGDTVIL-DPRRRPKDEASGRDL-PESTGWDMYKRRVEIPPGHVWVEGDNWRKTRDSNWYGPISKSLIQGKASAVVWPWDRSGSKPWE 212
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Match: A0A6A6C5V1_9PEZI (Mitochondrial inner membrane protease subunit n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6C5V1_9PEZI) HSP 1 Score: 112 bits (279), Expect = 3.150e-27 Identity = 75/181 (41.44%), Postives = 100/181 (55.25%), Query Frame = 1
Query: 61 LISLHDHVFAVAPVNGSSMAPALSPDWHARRHRDVVLFWKWDLVLARSPFRAFDPSAPHPVLRRGDVVQLMSPLRPDVFAVKRVVALAGDAVPRGSPRQDSRSLAVGADAGADDDGGEEDVVR---VVPPGHVWVEGDNARVSVDSKTYGPVSCGLVVARAAVVVWPWNRAGTRPWEGGSV 594
LI L+D++ + GSSM+P LSPD+ + D VL+ KW P R LRRGDVV +P P+ AVKRVVAL GD V P++ + + G + A + DV + VVPPGHVWVEGDN R + DS YGPVS L+ +A + P+ + G++PWEG V
Sbjct: 28 LILLNDNLLEYTTITGSSMSPTLSPDYETTQRCDGVLWKKW------RPTRD---------LRRGDVVFFSAPHNPEGTAVKRVVALGGDTVLL-DPKRRPKEVENGRTSEA---ARKWDVWKGRVVVPPGHVWVEGDNWRKTKDSNDYGPVSKSLIQGKAWCLYRPYTQFGSKPWEGYKV 189
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Match: A0A3M7H6G1_HORWE (Mitochondrial inner membrane protease subunit n=5 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7H6G1_HORWE) HSP 1 Score: 117 bits (293), Expect = 4.280e-27 Identity = 69/173 (39.88%), Postives = 91/173 (52.60%), Query Frame = 1
Query: 76 DHVFAVAPVNGSSMAPALSPDWHARRHRDVVLFWKWDLVLARSPFRAFDPSAPHPVLRRGDVVQLMSPLRPDVFAVKRVVALAGDAV---PRGSPRQDSRSLAVGADAGADDDGGEEDVVRV-VPPGHVWVEGDNARVSVDSKTYGPVSCGLVVARAAVVVWPWNRAGTRPWE 582
D+V V G SM P LSP + +D VL+ KW++ +RRGD+V P RPD KRV+A GD V PR P+ D+ + G D + RV +PPGHVWVEGDN R + DS YGP+S L+ +A+ VVWPW R+G++PWE
Sbjct: 383 DNVVQCTSVTGGSMEPTLSPLDNTTGQKDYVLWNKWEIASK---------------IRRGDIVLFSLPGRPDDHGTKRVIATEGDTVILDPRRRPKDDASGRDLPESTGWD-----MYMRRVEIPPGHVWVEGDNWRKTRDSNWYGPISMSLIQGKASAVVWPWGRSGSKPWE 535 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10526.714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10526.714.1 >prot_P-canaliculata_contig10526.714.1 ID=prot_P-canaliculata_contig10526.714.1|Name=mRNA_P-canaliculata_contig10526.714.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=202bp MTSPTAVLPLVHRTVFAAAALISLHDHVFAVAPVNGSSMAPALSPDWHARback to top mRNA from alignment at P-canaliculata_contig10526:9317..9922+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10526.714.1 ID=mRNA_P-canaliculata_contig10526.714.1|Name=mRNA_P-canaliculata_contig10526.714.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=606bp|location=Sequence derived from alignment at P-canaliculata_contig10526:9317..9922+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10526:9317..9922+ >mRNA_P-canaliculata_contig10526.714.1 ID=mRNA_P-canaliculata_contig10526.714.1|Name=mRNA_P-canaliculata_contig10526.714.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1212bp|location=Sequence derived from alignment at P-canaliculata_contig10526:9317..9922+ (Pelvetia canaliculata dioecious)back to top |