mRNA_P-canaliculata_contig10522.709.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Match: D7G0F5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0F5_ECTSI) HSP 1 Score: 654 bits (1688), Expect = 3.130e-218 Identity = 387/678 (57.08%), Postives = 459/678 (67.70%), Query Frame = 1
Query: 1 IQGLDSRNLEPHVRGLAAVLLRRALLLEEPTLWDCLQPAIGGENEYGSVPGVAGV---KGGQRDLQAFLLRVLSDEADASVRRKVGDLVGDLGRAVLDEEGPEGWPEFLPYVLQSASS----------------------------GWSNSSRGSDHMGETSDQQACGTFQKNIGGGPPSR-------RIVTGLRLMSVTAEHAGAAAAADAHAFQGLVETLQRCLCDGXXXXXXXGCCSDVRLEAVRALGSMVVNCARPSDQEAFESCLPHLLQAIQRTLSRDDRCTETGVWYSCETLELVIELAEACPAFFRPRVSQCVAGMVQVAGNASLETSVRLLALEFLVSIVEASPAMCRKIGDGTVANQSGMRVGNSPSPIPVEKTPADGSGTFAATVIPVCFSMMTELQQGDDLLWATRENEE-DSVGDNVSEASVGAEALERVALALGARAALPICRRLLMEGMGSWAWQRQHAALSALGVLANVLSQAQGGHGAEV----VSLMLPFLSSPLPRIQHASLKALERLAEEKITGERERFKWT*LQEVHHDAVVHAVVACLHPTNAARCPRVIHQALRTLAQLVEACPEEGFGSHAEPLVERCVGLLRQGSPMVREASVSLVAAMAEAGQG-DFNRFYDALMPILTQVLSTCNDAEQRLLRGKTLECVSLVGSAVGKER 1902
++G+ S++L PHVRGLAAVLLRRALL+EEPTLWDCL A + +G+ G G K GQR+LQA LL++LSDE DASVRRKVGDLVG+LGRAVLDE+GPEGWPEFLPYVLQSASS G+ GS G + Q GGG + +VTGLRLMS A+H AAAAD AF+ LVETLQRCLC G DVRLEAVRALGS+VV C RPSDQ +F +CLPHLLQAIQ TLS +R +E+ VWY CETLELV+ELAE CPAF RPRV+QCVAGMVQVA + S+ETSVR LALEFLVSIVEASPAMCRK+ GM D + FA +VIPVCFSMM EL + + WA E EE DSV DNV E VG+EALERVA ALGARAALP+CR+L+ EG+ WAWQ+QHAALSALG+LA+V +Q QG G E+ +S +LPF++ PR+QHASL ALER+AE++ LQE HH+ +V A++AC+ P N CPRV+H+AL TLA +VEACPE G HAE L+ERCV L+RQG MV+EA+V+LV+A AEA + DF RFYD +MP L Q+LS+C EQRLLRGKTLECVSLVG+ GKER
Sbjct: 89 LEGIGSKHLPPHVRGLAAVLLRRALLVEEPTLWDCLPAASDMGSGHGASEGGGGAEVGKMGQRELQACLLQILSDEGDASVRRKVGDLVGELGRAVLDEDGPEGWPEFLPYVLQSASSXXXXXXXXXXXXXXXXXXXXXXXXXAGNGYHQQHNGSADAGAQKELQQLQLCDVVKGGGVEAAGTPYAWATVVTGLRLMSSAAQHTAIAAAADPSAFKALVETLQRCLCWQGSGEGGGGS-PDVRLEAVRALGSVVVACERPSDQASFSTCLPHLLQAIQATLSSGERNSESRVWYCCETLELVVELAEVCPAFLRPRVAQCVAGMVQVAADRSVETSVRHLALEFLVSIVEASPAMCRKMPG------RGMEXXXXXXXXXXXXXXXDNA--FATSVIPVCFSMMAELPENES--WALGETEEEDSVEDNVCE--VGSEALERVARALGARAALPVCRQLVKEGLAGWAWQQQHAALSALGILADVFNQPQGEEGLEMRTEALSQLLPFIACSRPRVQHASLWALERMAEDQSPE---------LQEEHHEVIVPALLACIDPNNGG-CPRVLHRALLTLAVVVEACPEGGVMPHAEALLERCVMLIRQGPVMVQEAAVALVSAAAEAAEDEDFGRFYDVVMPFLLQILSSCPGQEQRLLRGKTLECVSLVGATAGKER 743
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Match: A0A836CCE4_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE4_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.070e-62 Identity = 193/624 (30.93%), Postives = 277/624 (44.39%), Query Frame = 1
Query: 175 QRDLQAFLLRVLSDEADASVRRKVGDLVGDLGRAVLDEEGPEGWPEFLPYVLQSASSGWSNSSRGSDHMGETSDQQACGTFQKNIGGGPPSRRIVTGLRLMSVTAEHAGAAAAADAHAFQGLVETLQRCLCDGXXXXXXXGCCSDVRLEAVRALGSMVVNCARPSDQEAFESCLPHLLQAIQRTLSRDD------RCTETGVWYSCETLELVIELAEACPAFFRPRVSQCVAGMVQVAGNASLETSVRLLALEFLVSIVEASPAMCRKIGDGTVANQSGMRVGNSPSPIPVEKTPADGSGTFAATVIPVCFSMMTELQQGDDLLWATRENEED--SVGDNVSEASVGAEALERVALALGARAALPICRRLLM-----------------------------EGMGSWAWQRQHAALSALGVLANVLSQAQGGHG--AEVVSLMLPFLSSPLPRIQHASLKALERLAEEKITGERERFKWT*LQEVHHDAVVHAVVACLHPTN--------AARCPRVIHQALRTLAQLVEACPEEGFGSHAEPLVERCVGLLRQGSPMVREASVSLVAAMAEAGQGDFNRFYDALMPILTQVLSTCNDAEQ--RLLRGKTLECVSLVGSAVGKE 1899
+R ++A LL+ L+ E DA++RR++ + G+L A+L+E G E TGL L E AAA DA +V LQ CL D VR A AL ++ C ++ AF CL L AI + + V CE LE+++++A CP FFR + V+GM +A NA+ S R LALEFLV++ EA+PAMCR++G G A+ S +FA +P+CF MM ELQ+ W+ E EE + GD+ AS GA+AL+R+A ALG R +LP C RL+ EG G AW +HA L A+ +A +++ G G A +V+ L L P R++HA+L A+ +++ + LQE HH A+V A++A + A C RV QA + +E CP + ++ ++ C L +G +V+E V +A+ AEA F Y A MP+L QVL+ C + R+LR KTLEC+SLVG AVGKE
Sbjct: 17 RRPVRAGLLKALAAEQDAAIRRRLAETAGELAAALLEECGSE-----------------------------------------------------TGLWLFGRMGEFLAGAAAQDADTAAAVVGALQNCLSDKASGA--------VRAAAAGALLGVLAGCGGEDERAAFAPCLVPLRSAIAAAAAAAGVHGTGAADGQASVRELCEVLEVLVDMALLCPTFFRAELQAFVSGMAALADNAAAAQSSRQLALEFLVTLAEAAPAMCRRLGAPAPRGHPQSHRGKD----------AEDSASFAGYTVPLCFRMMAELQEEPG--WSASEEEETGGAAGDD-GVASAGADALDRIARALGPRRSLPACYRLIAQCLSLDAAAAGVVAAAAALLPRGGFEGEGEGQGGRAWAARHAGLVAIAQVAEAAAESAGAEGERAVLVAAALAHLRHPHARVRHAALTAIGQMSTDHAPD---------LQEEHHAAIVPALLAAMGGAKGDGGKQAAAEPCARVRAQAAAAMVNFLEPCPSDVATAYLPSVLAACRHHLLRGPRLVQEQVVGAIASAAEAAGAAFTPHYAATMPLLKQVLAACGAQGKAYRMLRAKTLECMSLVGRAVGKE 557
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Match: A0A7S0X158_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0X158_9CHLO) HSP 1 Score: 196 bits (498), Expect = 2.270e-49 Identity = 174/629 (27.66%), Postives = 281/629 (44.67%), Query Frame = 1
Query: 40 RGLAAVLLRRALLLEEPTLWDCLQPAIGGENEYGSVPGVAGVKGGQRDLQAFLLRVLSDEADASVRRKVGDLVGDLGRAVLDEEGPEG--WPEFLPYVLQSASSGWSNSSRGSDHMGETSDQQACGTFQKNIGGGPPSRRIVTGLRLMSVTAEHAGAAAAADAHAFQGLVETLQRCLCDGXXXXXXXGCCSDVRLEAVRALGSMVVNCARPSDQEAFESCLPHLLQAIQRTLSRDDRCTETGVWYSCETLELVIELAEACPAFFRPRVSQCVAGMVQVAGNASLETSVRLLALEFLVSIVEA---SPAMCRKIGDGTVANQSGMRVGNSPSPIPVEKTPADGSGTFAATVIPVCFSMMTELQQGDDLLWA---TRENEEDSVGDNVSEASVGAEALERVALALGARAALPICRRLLMEGMGSWAWQRQHAALSALGVLANVLSQAQGGHGAEVVSLMLPFLSSPLPRIQHASLKALERLAEEKITGERERFKWT*LQEVHHDAVVHAVVACLHPTNAARCPRVIHQALRTLAQLVEACPEEGFGSHAEPLVERCVGLLRQGSPMVREASVSLVAAMAEAGQGDFNRFYDALMPILTQVLSTCNDAEQRLLRGKTLECVSLVGSAVGKER 1902
R AA++LR+ L ++PTLW PA+ Q L+ LL L +E +V +KV D V +LG + D+E P G WPE L Q SG Q N+ + +GL ++ A + AA+ H LV++L CL +V+L A+RA + D+E F LP +LQ + TL+ D + E +E+ IE+AE+ P F R + + V M+ VA LE + R LA EFLV++ EA +P M RK+ TFA+++ + +++ DD LW T E+EE+ GD A E L+R+A++LG A +P LL + W+++HA+L L +A + +V + L L P P+++ ++ +AL ++ + G + +QE ++ A++ + + PRV A + E +E H + L+ + + LL+ G +V+E +++ +A++A+ Q F ++YD +MP+L +L D RLLRGK LEC+SLVG AVG++R
Sbjct: 62 RSFAAIMLRKVLTRDDPTLWSKCSPAM------------------QASLKTELLAALKEEQAKTVVKKVCDTVSELGAELSDDEAPSGTTWPELLSTCFQFVQSG-----------------------QPNL--------MESGLLILGNLAHYM--AASLKPH-LATLVQSLGACLGHASR---------EVQLAALRAAAYFIQALEDAGDREKFAPMLPAMLQCLAATLNAGDEASAQ------EAIEMFIEVAESHPRFLRRSLVEVVGAMMSVARAEQLEAATRSLAAEFLVTLCEARDKAPGMVRKLP------------------------------TFASSLFETLMLFLLDVE--DDPLWHQADTDEHEEEGAGDLYGFAQ---ECLDRIAISLGGNAIVPAAGALLPAWLSDGDWRKRHASLICLAQIAEGCQKVMLAQIDALVDMCLKGLQDPHPKVRWSACQALGQMCTD--LGPQ-------IQERCAPRILPALMVAMDDFSH---PRVQAHAAAAVVNFSEGADQELLPPHLDTLITKLLLLLQHGKKLVQEGALTAMASVADCSQTLFIKYYDTVMPLLLSILVGATDKSHRLLRGKALECISLVGMAVGRDR 576
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Match: A0A3M7L2Y6_AUXPR (TOG domain-containing protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7L2Y6_AUXPR) HSP 1 Score: 194 bits (494), Expect = 7.290e-49 Identity = 183/642 (28.50%), Postives = 280/642 (43.61%), Query Frame = 1
Query: 1 IQGLDSRNLEPHVRGLAAVLLRRALLLEEPTLWDCLQPAIGGENEYGSVPGVAGVKGGQRDLQAFLLRVLSDEADASVRRKVGDLVGDLGRAVLDEEGPEGWPEFLPYVLQSASSGWSNSSRGSDHMGETSDQQACGTFQKNIGGGPPSRRIVTGLRLMSVTAEHAGAA----AAADAHAFQGLVETLQRCLCDGXXXXXXXGCCSDVRLEAVRALGSMVVNCARPSDQEAFESCLPHLLQAIQRTLSRDDRCTETGVWYSCETLELVIELAEACPAFFRPRVSQCVAGMVQVAGNASLETSVRLLALEFLVSIVEA---SPAMCRKIGDGTVANQSGMRVGNSPSPIPVEKTPADGSGTFAATVIPVCFSMMTELQQGDDLLWATRENEEDSVGDNVSEASVGAEALERVALALGARAALPICRRLLMEGMG-SWAWQRQHAALSALGVLANVLSQAQGGHGAEVVSLMLPFLSSPLPRIQHASLKALERLAEEKITGERERFKWT*LQEVHHDAVVHAVVACLHPTNAARCPRVIHQALRTLAQLVEACPEEGFGSHAEPLVERCVGLLRQGSPMVREASVSLVAAMAEAGQGDFNRFYDALMPILTQVLSTCNDAEQRLLRGKTLECVSLVGSAVGKER 1902
+QGL S N +P R L AVLLR+ L+ +EP+LW L PA KV DLV +L VL+E G WPE LP++ Q S G D + E+ A F + +MSV ++ G AAA AHA +DVRL A++A + + P+++E F++ +P L+Q I + D E LEL IELAE P F R ++ V+ M+QVA + SLE+ +R LA+EFLV++ EA +P M R++ Q R+ N C M+ L D W T E+E++ G E L+R++ ALG + +P+ L M + +W+++HAAL L +A + ++V+L L P+++ A+ +AL +L + LQE H VV A++ + PRV A + E C ++ + + L R + LL+ V+EA+++ +A++A+ Q F ++YD+ MP+L +L+ ND LLR K+LEC+SLVG AVG+ER
Sbjct: 72 VQGLRS-NPDPASRSLCAVLLRKVLVRDEPSLWTGLSPAS----------------------------------------KVCDLVSELAAGVLEESG---WPELLPFMFQCIQS-------GEDRLMES----ALSMFAQ------------LASHIMSVLLQYLGTLHGILAAALAHAS------------------------TDVRLAAMKATCAFIQELESPAEREKFQALVPALVQTIGHAIQAGDEPAAQ------EALELFIELAEENPRFLRKQLVDIVSAMLQVAESDSLESGIRTLAVEFLVTLCEAREKAPGMMRRLP------QLPERLFN-------------------------CL-MLFLLDVEDVPEWHTAEDEKEENAGEGELFEFGQECLDRISFALGGKTLVPVAGTTLTAYMADTGSWEKRHAALICLAQIAEGCVKVMVDEVEKLVALCLLGARDGTPKVRWAACQALGQLCTDLGPD---------LQEASHATVVPALLGLMGDFQN---PRVQAHACNAIVNFTETCDQDVISPYLDELATRLMALLQGSGRNVQEAALTALASLADCAQEYFIKYYDSCMPLLLHILTHANDRSHHLLRAKSLECISLVGMAVGRER 572
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Match: Q93VS8_ARATH (ARM repeat superfamily protein n=48 Tax=Brassicales TaxID=3699 RepID=Q93VS8_ARATH) HSP 1 Score: 190 bits (482), Expect = 2.640e-47 Identity = 131/436 (30.05%), Postives = 222/436 (50.92%), Query Frame = 1
Query: 604 SDVRLEAVRALGSMVVNCARPSDQEAFESCLPHLLQAIQRTLSRDDRCTETGVWYSCETLELVIELAEACPAFFRPRVSQCVAGMVQVAGNASLETSVRLLALEFLVSIVEA---SPAMCRKIGDGTVANQSGMRVGNSPSPIPVEKTPADGSGTFAATVIPVCFSMMTELQQGDDLLWATRENEEDSVGDNVSEASVGAEALERVALALGARAALPICRRLLMEGMGSWAWQRQHAALSALGVLANVLSQAQGGHGAEVVSLMLPFLSSPLPRIQHASLKALERLAEEKITGERERFKWT*LQEVHHDAVVHAVVACLHPTNAARCPRVIHQALRTLAQLVEACPEEGFGSHAEPLVERCVGLLRQGSPMVREASVSLVAAMAEAGQGDFNRFYDALMPILTQVLSTCNDAEQRLLRGKTLECVSLVGSAVGKER 1902
SDV++ A+ A+ S V A ++++ F+ LP +++ + +L+ + T E LEL+IELA P F R ++ V M+Q+A SLE S R LA+EFLV++ EA +P M RK+ F + V M+ +++ DD W + E E++ G+ S S+G E L+R+A++LG +P+ + + + WQ+ HA+L AL +A S+ + +VVS++L SP PR++ A++ A+ +L+ + LQ HH+ V+ A+ A + PRV A + E C E + + +V + + LL+ G MV+E +++ +A++A++ Q F ++YD +MP L +L D +R+LR K++EC+SLVG AVGK+R
Sbjct: 200 SDVKIAALNAVISFVQCLANSTERDRFQDVLPAMIRTLTESLNNGNEATAQ------EALELLIELAGTEPRFLRRQLVDIVGSMLQIAEADSLEESTRHLAIEFLVTLAEARERAPGMVRKLPQ------------------------------FIDRLFAVLMKMLEDIE--DDPAWYSAETEDEDAGET-SNYSMGQECLDRLAISLGGNTIVPVAYQQFSAYLAASEWQKHHASLIALAQIAEGCSKVMIKNLDQVVSMVLSQFQSPHPRVRWAAINAIGQLSTDLGPD---------LQNQHHERVLPALAAAMDDFQN---PRVQAHAASAVLNFSENCTPEILSPYLDGVVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQKYYDTVMPYLKTILMNATDKSKRMLRAKSMECISLVGMAVGKDR 584
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Match: A0A835DD67_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DD67_9MAGN) HSP 1 Score: 186 bits (471), Expect = 1.150e-46 Identity = 130/436 (29.82%), Postives = 220/436 (50.46%), Query Frame = 1
Query: 604 SDVRLEAVRALGSMVVNCARPSDQEAFESCLPHLLQAIQRTLSRDDRCTETGVWYSCETLELVIELAEACPAFFRPRVSQCVAGMVQVAGNASLETSVRLLALEFLVSIVEA---SPAMCRKIGDGTVANQSGMRVGNSPSPIPVEKTPADGSGTFAATVIPVCFSMMTELQQGDDLLWATRENEEDSVGDNVSEASVGAEALERVALALGARAALPICRRLLMEGMGSWAWQRQHAALSALGVLANVLSQAQGGHGAEVVSLMLPFLSSPLPRIQHASLKALERLAEEKITGERERFKWT*LQEVHHDAVVHAVVACLHPTNAARCPRVIHQALRTLAQLVEACPEEGFGSHAEPLVERCVGLLRQGSPMVREASVSLVAAMAEAGQGDFNRFYDALMPILTQVLSTCNDAEQRLLRGKTLECVSLVGSAVGKER 1902
SDVR+ A+ A + + + SD++ F+ LP ++Q + L+R T E LEL+IELA P F R ++ V M+Q+A SLE R LA+EF++++ EA +P M RK+ F + + + M+ +++ DD W ENE++ G+ S +VG E L+R++++LG +P+ LL M + WQ+ HAAL L +A S+ + +VVS++L P PR++ A++ A+ +L+ + G LQ +H V+ A+ A + PRV A + E C + ++ + +V + + LL+ G MV+E +++ +A++A++ Q F ++YDA+MP L +L D R+LR K++EC+SLVG AVGK++
Sbjct: 199 SDVRIAALGAAINYIQCLSSSSDRDRFQDLLPLMMQTLTEALNRGQESTAQ------EALELLIELAGTEPRFLRRQLVDVVGAMLQIAEADSLEEGTRHLAIEFVITLAEARERAPGMMRKLPQ------------------------------FISRLFAILMKMLLDIE--DDPAWHNAENEDEDAGET-SNYNVGQECLDRLSISLGGNTIVPVASELLPTYMAAPEWQKHHAALITLAQIAEGCSKVMIKNLEQVVSMVLNSFQDPHPRVRWAAINAIGQLSTD--LGPE-------LQVQYHQQVLPALAAAMDDFQN---PRVQAHAASAVLNFSENCTPDILLAYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQKYYDAVMPYLKAILVNATDKSNRMLRAKSMECISLVGMAVGKDK 583
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Match: UPI001CB88C63 (importin-5 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB88C63) HSP 1 Score: 187 bits (476), Expect = 1.550e-46 Identity = 130/436 (29.82%), Postives = 221/436 (50.69%), Query Frame = 1
Query: 604 SDVRLEAVRALGSMVVNCARPSDQEAFESCLPHLLQAIQRTLSRDDRCTETGVWYSCETLELVIELAEACPAFFRPRVSQCVAGMVQVAGNASLETSVRLLALEFLVSIVEA---SPAMCRKIGDGTVANQSGMRVGNSPSPIPVEKTPADGSGTFAATVIPVCFSMMTELQQGDDLLWATRENEEDSVGDNVSEASVGAEALERVALALGARAALPICRRLLMEGMGSWAWQRQHAALSALGVLANVLSQAQGGHGAEVVSLMLPFLSSPLPRIQHASLKALERLAEEKITGERERFKWT*LQEVHHDAVVHAVVACLHPTNAARCPRVIHQALRTLAQLVEACPEEGFGSHAEPLVERCVGLLRQGSPMVREASVSLVAAMAEAGQGDFNRFYDALMPILTQVLSTCNDAEQRLLRGKTLECVSLVGSAVGKER 1902
+DVR+ A+ A+ + + C SD++ F+ LP ++ + L+ T E LEL+IELA P F R ++ + V M+Q+A +LE R LA+EF++++ EA +P M RK+ F + + + M+ +++ D+ W T ENE++ G++ S SVG E L+R+A+ALG +P+ L + + WQ+ HAAL AL +A S+ + +VVS++L P PR++ A++ A+ +LA + LQ +H V+ A+ + + + PRV A + E C + + + +V + + LL+ G MV+E +++ +A++A++ Q F ++YDA+MP L +L ND R+LR K +EC+SLVG AVGKE+
Sbjct: 196 ADVRIAALSAVINFI-QCLSTSDRDRFQDLLPAMMTTLTEALNGGQEATAQ------EALELLIELAGTEPRFLRRQLVEVVGSMLQIAEAETLEEGTRHLAIEFVITLAEARERAPGMMRKLPQ------------------------------FISRLFGILLRMLLDIE--DEAAWHTAENEDEDAGES-SNYSVGQECLDRLAIALGGNTIVPVASEQLPAYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEQVVSMVLNSFQDPHPRVRWAAINAIGQLATDLGPD---------LQLQYHQRVLPALASAMDDFHN---PRVQAHAASAVLNFSENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQKYYDAVMPYLKAILVNANDKANRMLRAKAMECISLVGMAVGKEK 579
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Match: A0A6N2K6T8_SALVM (TOG domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2K6T8_SALVM) HSP 1 Score: 184 bits (467), Expect = 2.020e-46 Identity = 128/435 (29.43%), Postives = 219/435 (50.34%), Query Frame = 1
Query: 607 DVRLEAVRALGSMVVNCARPSDQEAFESCLPHLLQAIQRTLSRDDRCTETGVWYSCETLELVIELAEACPAFFRPRVSQCVAGMVQVAGNASLETSVRLLALEFLVSIVEA---SPAMCRKIGDGTVANQSGMRVGNSPSPIPVEKTPADGSGTFAATVIPVCFSMMTELQQGDDLLWATRENEEDSVGDNVSEASVGAEALERVALALGARAALPICRRLLMEGMGSWAWQRQHAALSALGVLANVLSQAQGGHGAEVVSLMLPFLSSPLPRIQHASLKALERLAEEKITGERERFKWT*LQEVHHDAVVHAVVACLHPTNAARCPRVIHQALRTLAQLVEACPEEGFGSHAEPLVERCVGLLRQGSPMVREASVSLVAAMAEAGQGDFNRFYDALMPILTQVLSTCNDAEQRLLRGKTLECVSLVGSAVGKER 1902
DV++ A+ A+ + + SD++ F+ LP +++ + L+ + T E LEL+IELA P F R ++ V M+Q+A SLE R LA+EF++++ EA +P M RK+ F + + + +M+ +++ DD W + ENE++ G+ S SVG E L+R+A++LG +P+ L + + WQ+ HAAL AL +A S+ +VV+++L P PR++ A++ A+ +L+ + LQ +H V+ A+ A + PRV A + E C E + + +V + + LL+ G MV+E +++ +A++A++ Q F ++YDA+MP L +L ND R+LR K++EC+SLVG AVGKE+
Sbjct: 199 DVKIAALNAVINFIQCLDNSSDRDRFQDLLPSMIRTLTEALNNGNEATAQ------EALELLIELAGTEPRFLRRQLVDVVGSMLQIAEAESLEEGTRHLAIEFVITLAEARERAPGMMRKLPQ------------------------------FISRLFGILMTMLLDIE--DDPAWHSAENEDEDAGET-SNYSVGQECLDRLAISLGWNTIVPVASEQLPAYLAAPEWQKHHAALIALAQIAEGCSKVMLKTLEQVVTMVLNSFYDPHPRVRWAAINAIGQLSTDLGPD---------LQNQYHQRVLPALAAAMDDFQN---PRVQAHAASAVLNFSENCTPEILTPYLDGVVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQKYYDAVMPYLKTILVNANDKANRMLRAKSMECISLVGMAVGKEK 582
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Match: A0A2P2MRV8_RHIMU (Uncharacterized protein MANES_15G108300 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MRV8_RHIMU) HSP 1 Score: 184 bits (466), Expect = 3.160e-46 Identity = 123/435 (28.28%), Postives = 221/435 (50.80%), Query Frame = 1
Query: 607 DVRLEAVRALGSMVVNCARPSDQEAFESCLPHLLQAIQRTLSRDDRCTETGVWYSCETLELVIELAEACPAFFRPRVSQCVAGMVQVAGNASLETSVRLLALEFLVSIVEA---SPAMCRKIGDGTVANQSGMRVGNSPSPIPVEKTPADGSGTFAATVIPVCFSMMTELQQGDDLLWATRENEEDSVGDNVSEASVGAEALERVALALGARAALPICRRLLMEGMGSWAWQRQHAALSALGVLANVLSQAQGGHGAEVVSLMLPFLSSPLPRIQHASLKALERLAEEKITGERERFKWT*LQEVHHDAVVHAVVACLHPTNAARCPRVIHQALRTLAQLVEACPEEGFGSHAEPLVERCVGLLRQGSPMVREASVSLVAAMAEAGQGDFNRFYDALMPILTQVLSTCNDAEQRLLRGKTLECVSLVGSAVGKER 1902
DV++ ++ A+ + + + SD++ F+ LP +++ + L+ + T E LEL+IELA P F R ++ V M+Q+A +LE R LA+EF+V++ EA +P M RK+ F + + + M+ +++ DD W + +NE++ G+ S S G E L+R+A++LG +P+ +L +E + + WQ+ HAAL AL +A S+ + +VVS++L P PR++ A++ A+ +L+ + LQ +H ++ A+ + + PRV A + E C E + + +V + + LL+ G MV+E +++ +A++A++ Q F ++YDA+MP L +L D R+LR K++EC+SLVG AVGK++
Sbjct: 203 DVKIASLNAVINFIQCLSSSSDRDRFQDLLPSMMRTLTEALNNGNEATAQ------EALELLIELAGTEPRFMRRQLVDVVGSMLQIAEAETLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQ------------------------------FISRLFAILMRMLLDIK--DDPAWHSAQNEDEDAGET-SNYSAGQECLDRLAISLGGNTIVPVASKLFLEYLAAPEWQKHHAALVALAQIAEGCSKVMLKNLEQVVSMVLSSFHDPHPRVRWAAINAIGQLSTDLGPD---------LQNQYHQRILPALASAMDDFQN---PRVQAHAASAVLNYSENCTPEILMPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQKYYDAVMPYLKAILVNATDKSNRMLRAKSMECISLVGMAVGKKK 586
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Match: A0A443N5C6_9MAGN (Importin-5-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443N5C6_9MAGN) HSP 1 Score: 185 bits (469), Expect = 1.250e-45 Identity = 129/436 (29.59%), Postives = 214/436 (49.08%), Query Frame = 1
Query: 604 SDVRLEAVRALGSMVVNCARPSDQEAFESCLPHLLQAIQRTLSRDDRCTETGVWYSCETLELVIELAEACPAFFRPRVSQCVAGMVQVAGNASLETSVRLLALEFLVSIVEA---SPAMCRKIGDGTVANQSGMRVGNSPSPIPVEKTPADGSGTFAATVIPVCFSMMTELQQGDDLLWATRENEEDSVGDNVSEASVGAEALERVALALGARAALPICRRLLMEGMGSWAWQRQHAALSALGVLANVLSQAQGGHGAEVVSLMLPFLSSPLPRIQHASLKALERLAEEKITGERERFKWT*LQEVHHDAVVHAVVACLHPTNAARCPRVIHQALRTLAQLVEACPEEGFGSHAEPLVERCVGLLRQGSPMVREASVSLVAAMAEAGQGDFNRFYDALMPILTQVLSTCNDAEQRLLRGKTLECVSLVGSAVGKER 1902
S VR+ A+ A S + + P+D + F+ LP ++Q + L+ T E LEL++ELA A P F R ++S V M+Q+A +LE R LA+EF++S+ EA +P M RK+ + F + + M+ +L+ DD W E EE+ G+ S SVG E L+R+A++LG P+ LL + + WQ+ HAAL L +A S+ + +VV+++L P PR++ A++ A+ +L+ + LQ +H V+ A+ + + PRV A + E C + + + +V + + LL+ G MV+E +++ +A++A++ Q F +YD +MP L +L D R+LR K++EC+SLVG AVGKE+
Sbjct: 205 SFVRIAALSAAVSFIQCLSAPADLDRFQDLLPPMMQTLSEALNSGQEATAQ------EALELLVELAGAEPRFLRKQLSDVVGSMLQIAEAEALEDGTRHLAIEFVISLAEARERAPGMIRKLPE------------------------------FVGRMFAILMKMLLDLE--DDQAWQNAETEEEDGGET-SNYSVGQECLDRLAISLGGNTIFPVAAELLPVYLSAPEWQKHHAALITLAQIAEGCSKVMIKNLEQVVTMVLNSFQHPHPRVRWAAINAIGQLSTDLGPD---------LQVQYHQQVLPALTSAMDDFQN---PRVQAHAASAVLNFSENCTSDILTPYLDGIVNKLLILLQNGKQMVQEGALTALASVADSSQEHFKTYYDVVMPYLKAILMKATDKSNRMLRAKSMECISLVGMAVGKEK 589 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10522.709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10522.709.1 >prot_P-canaliculata_contig10522.709.1 ID=prot_P-canaliculata_contig10522.709.1|Name=mRNA_P-canaliculata_contig10522.709.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=374bp MGETSDQQACGTFQKNIGGGPPSRRIVTGLRLMSVTAEHAGAAAAADAHAback to top mRNA from alignment at P-canaliculata_contig10522:1332..10067- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10522.709.1 ID=mRNA_P-canaliculata_contig10522.709.1|Name=mRNA_P-canaliculata_contig10522.709.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=8736bp|location=Sequence derived from alignment at P-canaliculata_contig10522:1332..10067- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10522:1332..10067- >mRNA_P-canaliculata_contig10522.709.1 ID=mRNA_P-canaliculata_contig10522.709.1|Name=mRNA_P-canaliculata_contig10522.709.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2244bp|location=Sequence derived from alignment at P-canaliculata_contig10522:1332..10067- (Pelvetia canaliculata dioecious)back to top |