mRNA_P-canaliculata_contig10517.701.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig10517.701.1
Unique NamemRNA_P-canaliculata_contig10517.701.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Match: D7FRN2_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN2_ECTSI)

HSP 1 Score: 1063 bits (2749), Expect = 0.000e+0
Identity = 551/892 (61.77%), Postives = 653/892 (73.21%), Query Frame = 1
Query:    1 SQAGFSGKWLTLSLSAVDPPPPHLPRFQLLDRVHRSFVLGTRLLAQAVDKGATTALNAEARRFVPLVHRRWFSFPVKGVVAIPPERNPFFLPQLRVLDPAEYPVPEAVETRFHHFAESKIPWVVSDPREVAQLAGLVVGASRLEGYVARYRALMWLEESQMAWDVQQYDLHDVFLKTDVKRYKEDDINSWLVAHLEVPGVMENRPRVAIGDVVRLRPAGSGRVEASSKKEMHGGQHWAGNVEDGWPTDQVDGEVEY----PQFEVQALVTHVNINMGTITMLLPHPGAVVSALGGHNPLTQSYGDAIASAVAKCRAQ---------NHNKEKHKCEGWHARFKLQRHGLQFIYHALDRLAASDARVDSTMGAIRYLFPEPHMLPEAPLWPMPEAAFEWEMRSTNESQRTAVRDIVTRAHGVVPYVIFGPPGTGKTSTVIEAILQLVKLRPRCKILACGPSDTAADVICERLAKYMSRDRLVRINWWQRLAASVHPAVLPYCTQDSDSGVFLPPENLSYEVVVCTCGTAGVLGLMGFDQDTFTHIFIDESSQAMEPELLVPLSLAGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQEMYKKYSRTPRALSAPSGTS----RCMTQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTDAMLAWEELPKAIYRPFPMIFYGVQGKDCAALDSPSYFNPVECSKVMDIIQGMLESEKVKVSTGDIAVICAFRKQVLILRTILRANNLGNVNVGQVEDFQGGEKKIVIISTTLSRRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLSNEDYWKDLLVFCKDNDAIRGCSCPALEVESREDRASLVEAVLQQSLLGGAGLDLMYPDDGAFYDQDNLQWR 2625
            +QAGF GKWLTL+LS VDP PP+ P   L+DRV R+FVLGTRLLAQAVD  A   L+AEARRF+P  HR WF  PVKGVVA P   NPF+LP+LR LD  E+ VPEAV+ RF   AES++PW+V D RE+  LAG+ VG  RL+ YVARY ALMWLEESQM+WDV QYDLHDV +  D  RY+E D ++ +V  +EVPGV+E+RPR+A+GDVVRLRP    +  A    + +G QHW G V D    D  DG  +     P FEVQ                                 ++ Y   IA AV   RA             KE+   +GWH RF+L+RHGLQ                                       P+PE++FEW M STN+SQRTAVRDIVT AHG VPY+IFGPPGTGKT TVIE+ILQLVKLRP C+ILA GPSDT+ADVICERL+++MSRD+LVRINWWQRL A VHP +L YC QDS+ G+F+PP  ++++VVVCTCGTAG+L ++G D++ FTHIF+DESS AME ELLVPLS AG   Q++LCGDPRQLGAAVRS +AR LGLE+SLQERLM QEMY K+++ P ALS+ +       RCMTQL+NNYR+HEVLL LPS +FYGGSL+RSAERS TD+ML WEELP+   + FP++FYG+QGKD + LDSPS++NP+ECSKVM+IIQ +L S KV+VSTGDIAVICAFR QVL LR +LR NNLG VNVGQVEDFQGGEKKIVIISTTLS+RHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLL+ E+YWK+LL+FCK+NDAIRGC+CPALEV  RED ASLV+AVLQQSLLGG G+DLMYP+ G FYDQD+LQWR
Sbjct:  424 NQAGFCGKWLTLALSVVDPSPPNQPLLHLVDRVERTFVLGTRLLAQAVDGRAAAVLSAEARRFLPAAHREWFKNPVKGVVATPRANNPFYLPRLRSLDVLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGVEVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPSTNIVGRVEVPGVLESRPRLAMGDVVRLRPPAQAKAGAKKVSKANG-QHWNGGVGDVVSADGTDGSHQKLGNAPDFEVQG--------------------------------SELYAKTIARAVKAARASVQAAGXXXXXXXKEEAAMDGWHCRFQLERHGLQ---------------------------------------PLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAVGPSDTSADVICERLSRHMSRDQLVRINWWQRLTAGVHPNILSYCPQDSNRGMFVPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAG-RAQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHAQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLTWEELPET--KAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSTGDIAVICAFRMQVLRLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWR 1240          
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Match: A0A6H5KSW5_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW5_9PHAE)

HSP 1 Score: 995 bits (2572), Expect = 0.000e+0
Identity = 534/904 (59.07%), Postives = 645/904 (71.35%), Query Frame = 1
Query:   49 VDPPPPHLPRFQLLDRVHRSFVLGTRLLAQAVDKGATTALNAEARRFVPLVHRRWFSFPVKGVVAIPPERNPFFLPQLRVLDPAEYPVPEAVETRFHHFAESKIPWVVSDPREVAQLAGLVVGASRLEGYVARYRALMWLEESQMAWDVQQYDLHDVFLKTDVKRYKEDDINSWLVAHLEVPGVMENRPRVAIGDVVRLRPAGSGRVEASSKKEMHGGQHWAGNVEDGWPTDQVDGEVEY----PQFEVQALVTHVNINMGTITMLLPHPGAVVSALGGHNPLTQSYGDAIASAVAKCRAQNHNKEKHKCEGWHARFKLQRH-------------GL---QFIYHALDRLAASDARVDSTMGA--IRYLFPEPHMLPEAPLWPMPEAAFEWEMRSTNESQRTAVRDIVTRAHG----------------VVPYVIFGPPGTGKTSTVIEAILQLVKLRPRCKILACGPSDTAADVICERLAKYMSRDRLVRINWWQRLAASVHPAVLPYCTQDSDSGVFLPPENLSYEVVVCTCGTAGVLGLMGFDQDTFTHIFIDESSQAMEPELLVPLSLAGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQEMYKKYSRTPRALSAPSGTS----RCMTQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTDAMLAWEELPKAIYRPFPMIFYGVQGKDCAALDSPSYFNPVECSKVMDIIQGMLESEKVKVSTGDIAVICAFRKQVLILRTILRANNLGNVNVGQVEDFQGGEKKIVIISTTLSRRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLSNEDYWKDLLVFCKDNDAIRGCSCPALEVESREDRASLVEAVLQQSLLGGAGLDLMYPDDGAFYDQDNLQWRVML 2634
            V+  PP LPR   L R          LLAQAVD  A   LNAEARRF+P  HR WF  PVKGVVA P   NPF+LP+LR L+  E+ VPEAV+ RF   AES++PW+V D RE+  LAG+ VG  RL+ YVARY ALMWLEESQM+WDV QYDLHDV +  D  RY+E D ++ +V  LEVPGV+E+RPR+AIGDVVRLRP     +  + K     GQH  G V      D  DG  +     P FEVQALV++V+++ G +T+LLPHPG++ +A       ++ Y   IA AV   RA              A  + +R              G+   +FI+HAL+RL   +   DS  G+  +RYLFPEP MLPE PLWP+PE++FEW M STN+SQRTAVRDIVT AHG                V  Y ++ P    +T                    A GPSDT+ADVICERL+++MSRD+LVRINWWQRL A VHP +L YC QDS+ G+FLPP  ++++VVVCTCGTAG+L ++G D++ FTHIF+DESS AME ELLVPLS AG   Q++LCGDPRQLGAAVRS +AR LGLE+SLQERLM ++MY K+++ P ALS+ +       RCMTQL+NNYR+HEVLL LPS +FYGGSL+RSAERS TD+ML WEELP+   + FP++FYGVQGKD + LDSPS++NP+ECSKVM+IIQ +L S KV+VSTGDIAVICAFR QVL LR +LR NNLG VNVGQVEDFQGGE+KIVIISTTLS+RHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLL+ E+YWK+LL+FCK+NDAIRGC+CPALEV  RED ASLV+AVLQQSLLGG G+DLMYP+ G FYDQD+LQWRVML
Sbjct:   69 VETFPPPLPRLICLGR----------LLAQAVDGRAAAVLNAEARRFLPAAHREWFKCPVKGVVATPRANNPFYLPRLRSLEVLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGVKVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPSTVVVGRLEVPGVLESRPRLAIGDVVRLRPPAQA-IPGAKKVSEANGQHRNGGVGGVVSADGTDGSHQKLGNAPDFEVQALVSNVSLSQGVVTLLLPHPGSLTAA-SSSTAGSELYAKTIARAVKAARASKQAAXXGGXXXAAAAVRTRRRLRWTDGTAGFSWSGMACRRFIHHALNRLVMFE---DSVSGSSPLRYLFPEPDMLPETPLWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQASTLHHFWSSWHRQDVHCYRVYPPTRQAQTGVPDSGE-------------AVGPSDTSADVICERLSRHMSRDQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFLPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAG-RAQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEKDMYSKHAKAPTALSSATSNEATDVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLTWEELPET--KAFPLLFYGVQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSTGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEQKIVIISTTLSKRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWRVML 941          
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Match: A0A4D9D490_9STRA (RNA helicase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D490_9STRA)

HSP 1 Score: 523 bits (1346), Expect = 4.150e-167
Identity = 350/945 (37.04%), Postives = 504/945 (53.33%), Query Frame = 1
Query:    1 SQAGFSGKWLTLSLSAVDPPPPHLPRFQLLDRVHRSFVLGTRLLAQAVDKGATTALNAEARRFVPLVHRRWFSFPVKGVVAIPPERNPF----FLPQLRVLDPAEYPVPEAVETRFHHFAESKIPWVVSDPREVAQLAGLVVGASRLEGYVARYRALMWLEESQMAWDVQQYDLHDVFLKTDVKRYKEDDINSWLVAHLEVPGVMENRPRVAIGDVVRLRPAGSGRVEASSKKEMHGGQHWAGNVEDGWPTDQVDGEVEYPQFEVQALVTHVNINMGTITMLLPHPGAVVSALGGHNPLTQSYGDAIASAVAKCRAQNHNKEKHKCEGWHARFKLQRHGLQFIYHALDRLAASDARVDSTMGAIRYLFPEPHMLPEAP---------------LWPMPEAAFEWEMRSTNESQRTAVRDIVTRAHGVVPYVIFGPPGTGKTSTVIEAILQLVKLRPRCKILACGPSDTAADVICERLAKYMSRDRLVRINWWQRLAASVHPAVLPYCTQDSDSGVFLPPEN-----LSYEVVVCTCGTAGVLGLMGFDQDT---FTHIFIDESSQAMEPELLVPLSLAGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQ------EMYKKYSRTPRALSAPSGTS------------RCMTQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTDAMLAWEELP-------------------KAIYRPFPMIFYGVQGKDCAALDSPSYFNPVECSKVMDIIQGMLESEKVKVSTGDIAVICAFRKQVLILRTILRANNLGNVNVGQVEDFQGGEKKIVIISTTLSRRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLSNE-DYWKDLLVFCKDNDAIRGCSCP--ALEVESREDRASLVEAVLQQSLLGGAGLDLMYPDDGAFYDQDNLQWRVML 2634
            S++    KW+   +      P H       D  + SFVLG +++A   D+ A   LN EAR FVP   RR+F  P   +V+ P E +PF        LR L   +Y +P+ +   F  F  +K+    S+  +   L G+V   + +  Y    RA+++LEE+Q   DV++YDL  V +    +   +D  N+ LVA + VPG  E RP +A GD VRLRP+    +  S ++ M                            E++A+V         + +LLP                  +  ++  + ++               +H RF   R+G +F++ AL           ST    R +FP     PE                    + EAA +W  R  NE QR AV DIV + HG +PY+++GPPGTGKT TVIEAILQ+ +  PR K+LA  PSD AAD++ ERL+++M   +L R+NW QRL AS+ P++L Y   D+   +F  P++     L ++V+V TC ++G+L L+     T   F+HI +DE+SQA++PE++VPLSLAGPDT +VL GDP+QLGA  R+   + LGL  SLQERLM        ++  + S T   +  P G+             RC+T L  NYRSH+ ++ +PS +FY  +L +  ++S+ D+MLAWE LP                   +A  + FP++F+G  G+    LDSPS+FN VEC KV+D++  +L S +V+V   DIA+I AFRKQVL LR++LR    G +N+GQVEDFQG E K+VIIST LS RH  E   ++GFLG PK+FNVA+TRAQAL V+VGNP  L  +   W+ LL FCKD+ A+RG S P    +VES E   SL++ +  +SLLG A  + +YP     Y  D+  WR++L
Sbjct:  196 SESRIVKKWVLFRIETPGMGPAH-------DFQYHSFVLGRKVVASVADRAAQALLNVEARAFVPQGLRRYFDEPC-NMVSHPDEPSPFQPVGMANVLRYLP--DYFLPDDIRRAFLGFKAAKL----SERSDPYSLFGIVKSPTTVLEYCRNMRAMLYLEEAQAGEDVRRYDLFGVPIT--YREKSKDKPNAPLVATISVPGAAEKRPPLAYGDCVRLRPSSLPAI-GSGRRVM---------------------------VEMRAVVLETREEK--VKILLP----------------PKFPTSMFPSDSR---------------FHIRFTYDRYGFRFLHRALYCF--------STPAPARRIFPNFFFPPEGGGPEGEENEERGRKIRAVAVDEAAIQWVNRVINEEQRRAVLDIVNQTHGSLPYILYGPPGTGKTLTVIEAILQICRHHPRSKVLAVAPSDVAADILAERLSEHMEPKQLFRLNWCQRLMASMKPSLLRYSCWDAKVSLFSLPDDEPRSILEHQVIVSTCASSGLLSLLDISGQTPVSFSHILVDEASQALQPEVMVPLSLAGPDTGVVLAGDPKQLGAVTRNPLVQELGLARSLQERLMETCSIYRTQLAAEASATEGGVEHPKGSEHRTSAPKEGDPGRCLTMLRKNYRSHQAIIEVPSRMFYDRTLEQHGDKSVIDSMLAWEMLPGSSSATALDTAPLRSTARAQAGPKGFPILFWGCLGEHMHELDSPSFFNVVECGKVLDLVHALLSSTRVQVRMQDIAIISAFRKQVLKLRSLLREKGYGAINIGQVEDFQGQETKVVIISTVLSARHPNEISEQLGFLGHPKRFNVAITRAQALTVIVGNPYALWEDVGGWRQLLEFCKDHGALRGSSGPLGTPDVESVE---SLLDTIANESLLGKASSNDIYPTSLEDYFSDS-PWRLLL 1051          
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Match: A0A835YTD6_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD6_9STRA)

HSP 1 Score: 498 bits (1281), Expect = 2.020e-152
Identity = 327/858 (38.11%), Postives = 451/858 (52.56%), Query Frame = 1
Query:  427 LEGYVARYRALMWLEESQMAWDVQQYDLHDVFLKTDVKRYKEDDINSWLVAHLEVPGVMENRPRVAIGDVVRLRPAGSGRVEASSKKEMHGGQHWAGNVEDGWPTDQ--------VDGEVEYPQFEVQALVTHVNINMGTITMLLPHPGAVVSALGGHNPLTQSYGDAIASAVAKCRAQNHNKE---------------------------------------------KHKCEGWHARFKLQRHGLQFIYHALDRLAASDARVDSTMGAIRYLFPEPHMLPEAPLWPMPEAAFEWEMRSTNESQRTAVRDIVTRAHGVVPYVIFGPPGTGKTSTVIEAILQLVKLRPRCKILACGPSDTAADVICERLAKYMSRDRLVRINWWQRLAASVHPAVLPYCTQDSDSGVF-LPPENLS-YEVVVCTCGTAGVLGLMGFDQDT-----------------------FTHIFIDESSQA-----------MEPELLVPLSLAGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQEMYKKYSRTPRALSAPSGTSRCMTQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTDAMLAWEELPKAIYRP------------------FPMIFYGVQGKDCAALDSPSYFNPVECSKVMDIIQGMLESEKVKVSTGDIAVICAFRKQVLI----------LRTILRANNLGNVNVGQVEDFQGGEKKIVIISTTLSRRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLSNEDYWKDLLVFCKDNDAIRGCSCPALEVESREDRASL--VEAVLQ--QSLLGGAGLDLMYPDD-GAFYDQDNLQWRVML 2634
            ++ ++ R R L+W+EE QM  D++ YD+H V  +  +K + E      +VA + V G ME+RPR+AIGD VRLR +  G+  A     + G       V  G    Q        +DGE      E  A+V+ V +  G + M++P P +   A+  H P        +  A    RA+ + +                                              +     WH RF   R GLQF++ AL     S A       A RYLFP+  MLP      +      W    TNE QR AV DIVTRAH  +PY+IFGPPGTGKT T+ EA LQ++      ++L C PSD AADV+  RLA +++  +++R+ WWQR   S+  ++L YC  D    +  LP E LS Y+V+V TCG AG + ++   Q                         FTHIF DESSQA           +E ELLVPL+LA  DT ++L GDPRQLGA VRS  A  LGL  SLQERLM   +Y         +   + + RC +QL +NYRSH VLL +PS LFY G+L+  A++ L +++  WE LP  + +                   FP+  YG+QG+D   LDSPS++NPVECSK++D+++ +L S +V V+TGDI +I AFR QV+           LR  LR N LG+VNVGQ+         I IIST LSRRHR+E EG++GFLGDPK+FNVALTRA AL ++VG+P+LL  E YW+ +L +C+ + A RGC C A+  +     A++   +A L+  +S+LG   ++ MYP D  +FY  D+ QWRV+L
Sbjct:  807 VQRHIDRLRRLLWIEECQMRRDIESYDMHGV--RPRLKMHGE-----LMVASILVKGAMEHRPRLAIGDEVRLRVSNVGKGPARGAA-VEGDFLQGEAVALGCRVVQTNLNMSMLLDGEAVVVG-EAVAVVSSVRLKDGLVKMVMP-PESTAVAVAAHAP------PGLLPATLNARARRNFQRIVAAHLPPAAPRGVPPPPPRKAPQRKTRVAQXXXXXXXXXXXXXXEDAPPRWHVRFGFSRLGLQFMHAALQGAMRSSA-------AQRYLFPDMAMLPPLTGKQLSPPRVAWINARTNELQRKAVVDIVTRAHAPLPYIIFGPPGTGKTMTMTEAALQVLIHTRDARVLVCAPSDAAADVVARRLAPHLTPQQMLRLCWWQRPTESLPSSLLQYCCIDPTVSLLALPTEPLSSYQVIVTTCGAAGQIAMLSELQQQRSDSSEHEAWWPIAAALPQQRPRFTHIFCDESSQAKGADLRVRKEALEAELLVPLALASDDTSIILAGDPRQLGATVRSPLAARLGLGTSLQERLMALPLYGAEDGGE-DMETLAASMRCYSQLTSNYRSHRVLLEVPSRLFYRGTLVERADKQLVESLCEWEGLPPVVRQRQEGQDGEEGGEEGGGPAHFPLFMYGIQGQDMHELDSPSFYNPVECSKIVDLVKSLLSSTRVSVTTGDIGIIAAFRMQVIHRNVQAGLVIQLRKALRLNGLGSVNVGQIATISTAA-LIAIISTVLSRRHRLETEGRLGFLGDPKRFNVALTRAMALVIIVGSPDLLLTERYWEQVLAYCRAHGAYRGCECAAMGTDGSGGSAAIDVADAALRLCRSVLGAGLVEDMYPTDIDSFYGGDDAQWRVVL 1639          
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Match: A0A7S2F4L8_9STRA (RNA helicase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4L8_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 5.630e-129
Identity = 239/523 (45.70%), Postives = 319/523 (60.99%), Query Frame = 1
Query: 1171 NESQRTAVRDIVTRAHGVVPYVIFGPPGTGKTSTVIEAILQLVKL-----------------------RPRCKILACGPSDTAADVICERLAKYMSRDRLVRINWWQRLAASVHPAVLPYCTQDSDSGVFLPPE---NLSYEVVVCTCGTAGVLGLMGFDQDTFTHIFIDESSQAMEPELLVPLSLAGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQEMYKKYSRTPRALSAPSGTSRCMTQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTDAMLAWEELPKAIYRPFPMIFYGVQGKDCAALDSPSYFNPVECSKVMDIIQGMLESEKVKVSTGDIAVICAFRKQVLILRTILRANNLGNVNVGQVEDFQGGEKKIVIISTTLSR-RHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLSNEDYWKDLLVFCKDNDAIRGCSCPALEV--------ESREDRASLVEAVLQQSLLGGAGLDLMYPDDGAFYDQDNLQWRVML 2634
            N  Q  AV  I+    G     IFGPPGTGKT T++EA L ++K                        + +C++L   PSD AADV+C RLAK +S   L R+ WWQ   A V P++L Y       G+  P +   + ++ VVV TC  +G+L ++G+ +  F+HI +DES QA+EPE+L+PLSLA  DT +VLCGDPRQLGA+VRS  AR LGL  S+QERLM     K++  T  +  A S     +  L  NYRSH  L++LPS LFY G L   A  SLT ++L W+ L     R FP++F GV G+D AALDSPS+ N VE ++V+++++ ++ESEKVKV+T DI VI  FR+QVL +R +LR   LG VNVGQVEDFQG E ++++IST LSR R  + KEG IG L DP++FNV +TRAQAL +VVGNP +L  + +W+ LL  C DND+  GC+CP L V            D  +L+E +    LLGG  ++ +YP D A    D   WRVML
Sbjct:  215 NTMQLHAVDRILHLPAGAPILTIFGPPGTGKTMTLVEAALAILKRDADEKVAYYRMHRANSRLGVWVNKSKCRLLITAPSDAAADVLCLRLAKSLSPKELFRMYWWQAKLAQVPPSLLAYTGTTEGGGILSPVKARPDSTFSVVVTTCAGSGLLKILGWKRGDFSHIIVDESCQAVEPEVLIPLSLADNDTAMVLCGDPRQLGASVRSPIARELGLGRSMQERLMS---LKQHGGTSGSSYADSN----VIMLEANYRSHPDLIKLPSELFYDGRLEVHAHESLTHSLLRWDMLR----RKFPLVFKGVLGQDMAALDSPSFCNAVEANEVVNLVKRLIESEKVKVTTSDIGVIAGFRQQVLTIREVLRGCGLGAVNVGQVEDFQGQECRVIVISTVLSRYRSLLVKEG-IGLLHDPQRFNVCVTRAQALTIVVGNPFVLLQDPHWRALLCHCIDNDSYHGCACPELGVGRDGLGLSSDGTDSDALLEQISHMMLLGGGDVETVYPQDIAASYVDERSWRVML 725          
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Match: A0A8J2S3B2_9STRA (RNA helicase n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3B2_9STRA)

HSP 1 Score: 375 bits (963), Expect = 4.720e-110
Identity = 274/766 (35.77%), Postives = 389/766 (50.78%), Query Frame = 1
Query:  427 LEGYVARYRALMWLEESQMAWDVQQYDLHDVFLK--------TDVKRYKEDDINSWLV------------AHLEVPGVMEN----RPRVAIGDVVRLRPAGSGRVEASSKKEMHGGQHWAGNVEDGWPTDQVDGEVEYPQFEVQALVTHVNINMGTITMLLPHPGAVVSALGGHNPLTQSYGDAIASAVAKCRAQNHNKEKHKCEGWHARFKLQRHGLQFIYHALDRLAASDARVDSTM----GAIRYLFPEPHMLPEAPLWPMPEAAFEWEMRSTNESQRTAVRDIVTRAHGVVPYVIFGPPGTGKTSTVIEAILQLVKLRPRCKILACGPSDTAADVICERLAKYMSR------DRLVRINWWQRLAASVHPAVLPYC-TQDSDSGVFLPPENLSYEVVVCTCGTAGVLGLMGFDQDTFTHIFIDESSQAMEPELLVPLSLAGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQEMYKKYSRTPR----ALSAPSGTSRCMTQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTDAMLAWEELPKAIYRPFPMIFYGVQGKDCAALDSPSYFNPVECSKVMDIIQGMLESEKVKVSTGDIAVICAFRKQVLILRTILRANNLGNVNVGQVEDFQGGEKKIVIISTTLSRR---HRVEKEGK---IGFLGDPKKFNVALTRAQALAVVVGNPNLLSNEDYWKDLLVFCKDNDAIRGCSCPALEVESRED--RASLVEAVLQQSLLGGAGLDLMYP 2583
            L   +A  RAL+WLEE+    D++  D+ +V L+        T    Y       W                L VPG  E+    RP +  GD +RLRP    R                          Q+  E+    +E++A+V  V  ++  +T+ LP             PL Q   +  A   A+               WHARF+ Q+ G +F++ AL ++AA  A  +  +    G           + +     +PE A +      NE QR AV  I   +  + P V+FGPPGTGKT+ V EAI +L   R   +IL C PSD AADV+  R+A  M          L+R+NWWQR   SV PA+L YC T+D    VF      +  VV+ TC  AGVL  MG  +  F+HI +DE++QA+EPE LVP++LAGP T++ L GDP QLG AVRST A   GL  SL +RL+           P      L + +  +  + +L  NYR+H  LL LPS LFYG +L+ ++E +    +L WE           ++ +GV G    A+DSPSY N  E + V  +++ +L S+KV+    D+ V+CAFR Q +++R +LRA NLGNV VGQ+ DFQG E K+VI++ TLSR+   +R E +     IG LG  ++FNVA+TRA+AL V+VG+P LL+ E YW+D L  C D DA RG        ++++D   A L + +  ++LLGG  LD +YP
Sbjct:  496 LRDRMAHLRALLWLEEASTTLDLEAADVFEVKLRNIQALPALTTNPYYAPATPWKWFGFAPGTVISEAARCTLTVPGASESASGARPPIQQGDAIRLRPTEQSR--------------------------QLFAELAGGVYELRAVVADVRADV--LTLALPRC-----------PLIQKLLEREAQGAAEM-------------AWHARFRPQQAGAKFLHDALSQIAADPAPFERILLGGAGTDAGSADNGDAVDD-----VPEGALD-----LNEQQRAAVAAITAPSPRLPPVVVFGPPGTGKTAVVAEAIRRLAARRGA-RILCCAPSDEAADVLTRRVAAAMESLEPHKPPSLLRLNWWQRKQDSVAPALLRYCSTRDGQFDVFSRNNIKNKTVVITTCACAGVLLRMGL-RGHFSHIVVDEAAQALEPEALVPVALAGPATRVTLAGDPNQLGPAVRSTDALKRGLGTSLLKRLLLTAAELSGDAPPGLKRFGLGSAARVAPIVCKLNTNYRAHGSLLALPSRLFYGDALVPASETAHAQ-LLPWEGTS--------LLCWGVNGTHAHAVDSPSYLNHDEANCVASLLESLLRSDKVQCEPRDVGVLCAFRAQTILIRQMLRAKNLGNVMVGQIYDFQGCEHKVVIVTLTLSRQPIANRDEDDDSAPPIGLLG-ARRFNVAVTRAKALCVIVGHPKLLAGEPYWRDCLQDCVDRDAYRGAKLDEDGDDAQDDDVAADLTDMIASKNLLGGGDLDRLYP 1187          
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Match: A0A7S3VA28_9STRA (RNA helicase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VA28_9STRA)

HSP 1 Score: 360 bits (924), Expect = 7.960e-106
Identity = 254/725 (35.03%), Postives = 372/725 (51.31%), Query Frame = 1
Query:  559 INSWLVAHLEVPGVMENRPRVAIGDVVRLRPAGSGRVEASSKKEMHGGQHWAGNVEDGWPTDQVDGEVEYPQFEVQALVTHVNINMGTITMLLPHPGAVVSALGGH-NPLTQSYGDAIASAVAKCRAQNHNKEKHKCEGWHARFKLQRHGLQFIYHALDRLAASDARVDSTMGAIRYLFP--------EPHMLPEAPLWPMPEAAFE--WEMRSTNESQRTAVRDIVTRAHGVVPYVIFGPPGTGKTSTVIEAILQLVKLRPRCKILACGPSDTAADVICERLAKYM----------SRDRLVRINWWQRLAASVHPAVLPYCTQDSDSGVFLPPEN---LSYEVVVCTCGTAGVLGLMGFDQ---DTFTHIFIDESSQAMEPELLVPLSLAGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQEMYKKYSRTPRALSAPSGTSRCM-TQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTDAMLAWEELPKAIYRPFPMIFYGVQGKDCAALDSPSYFNPVECSKVMDIIQGMLESEKVKVSTGDIAVICAFRKQVLILRTILRANNLGNVNVGQVEDFQGGEKKIVIISTTLSR---RHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLS-NEDYWKDLLVFCKDNDAIRGCSCPALEVESREDRASLVEAVLQQSLLG-GAGLDLMYPDDGAFYDQDNLQWRVML 2634
            + S  +A++ VPGV ENRP V+IGD+VRLR                                 VD      + EV   V+ V+I    I + LP P +    L    +P  ++Y      +     +   N+         ARF + R       H + +LA + A   S     R + P        + H           +  F+  W +++ N  Q+TAV+DI+   H   PY+I+GPPGTGKT  + EAI Q+++     ++L C PSD A D+I  RL   M           + +++R+NW+ R  +S+ P VL  CT   DSG F  P+    +S + ++C C  AG+L +   +    D   ++F+DES Q+ E E+L PL   G +  +VL GDP+QLG  VRS SA   GL +SLQERLMG  +Y+         S    +  C+ T+LV+NYRSH  LLR+PS LFY G+L       LT A   +E LP    R FP++ Y V+G + + +D+PS++N  EC+ V+ II  +L S  +K+ +G+IAVI  FR QVL +R ILR N LG++NVG VEDFQG E  +VIIST L++   R +   +G +GF+ DP++FNVALTRA +L V+VGN + L  +  YW  L+   + N  I G    + +    +     ++ +   +LLG G  LD  Y      Y QD+ +W+V L
Sbjct:  370 VGSRFIAYISVPGVAENRPAVSIGDLVRLR--------------------------------FVD------ELEVVGEVSAVDIQKERIMLFLPLPNSEGKYLNAMMHPKNEAYVRQKQGSXXXXXSSGMNRPAD-----FARFDV-RFATSSRAHGVFKLAMNYAFSKSMEQIKRIIAPSLFIRGIKKKHQRSS-------QTDFDCAW-LQNLNTQQKTAVQDILDSNHSSAPYIIYGPPGTGKTMVICEAIAQILQQHAHKRVLVCAPSDAACDIIATRLLTLMHTSSNKMPSLGQRKIMRVNWFSRNPSSL-PPVLSTCTPIDDSGFFKLPDKGDLVSVQCIICRCFVAGMLDINADENPWIDNVDYVFVDESCQSYEFEVLTPLLKVGRNCSIVLTGDPKQLGPTVRSISAGRSGLSLSLQERLMGLRLYQ---------SEIESSDWCVITRLVDNYRSHIALLRVPSQLFYDGTLRYKGCDKLTGACQNFEMLPNG--RTFPLMMYNVEGTEMSKIDTPSFYNKQECNAVLRIINALLSSPNIKIHSGEIAVITCFRAQVLCMRQILRQNGLGSINVGVVEDFQGQETSVVIISTVLTKNQDRWKSGPKGGLGFMTDPRRFNVALTRASSLCVIVGNSSFLEISGSYWTALIEHIRRNSGISGEYSSSRKQNFDDGIFDFIQQLENLNLLGKGHELD-RYEMAMQGYYQDSPEWKVCL 1029          
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Match: A0A485LES7_9STRA (RNA helicase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LES7_9STRA)

HSP 1 Score: 354 bits (909), Expect = 1.790e-104
Identity = 266/797 (33.38%), Postives = 377/797 (47.30%), Query Frame = 1
Query:  109 FVLGTRLLAQAVDKGATTALNAEARRFVPLVHRRWFSFPVKGVVAIPPERNPFFLPQLRVLDPAEYPVPEAVETRFHHFAESKIPWVVSDPREVAQLAGLVVGASRLEGYVARYRALMWLEESQMAWDVQQYDLHDVFLKTDVKRYKEDDINSWLVAHLEVPGVMENRPRVAIGDVVRLRPAGSGRVEASSKKEMHGGQHWAGNVEDGWPTDQVDGEVEYPQFEVQALVTHVNINMGTITMLLPHPGAVVSALGGHNPLTQSYGDAIASAVAKCRAQNHNKEKHKCEGWHARFKLQRHGLQFIYHALDRLAASDARVDSTMGAIRYLFPEPHMLPEAPLWPMPEAAFEWEMRSTNESQRTAVRDIVTRAHGVVPYVIFGPPGTGKTSTVIEAILQLVKLRPRCKILACGPSDTAADVICERLAKYMSRDRLVRINWWQRLAASVHPAVLPYCTQDSDSGVFLPPEN---LSYEVVVCTCGTAGVLGLMGFDQDTFTHIFIDESSQAMEPELLVPLSLAGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQEMYKKYSRTPRALSAPSGTSRCMTQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTDAMLAWEELPKAIYRPFPMIFYGVQGKDCAALDSP-SYFNPVECSKVMDIIQGMLESEKVKVSTGDIAVICAFRKQVLILRTILRANNLGNVNVGQVEDFQGGEKKIVIISTTLSRRHRVEKEGK-----IGFLGDPKKFNVALTRAQALAVVVGNPNLLSNEDYWKDLLVFCKDNDAIRG 2472
            F +  R+    V      AL  ++  FVP   R  F  P K     P   +P       +LD           T    F+ S    V + P +  +L  L         Y   + AL+  EE++MA D+  YDL  + L   V        + +++A L+VPG +E RP +  G VVRLR                 G H                 V     E+  LV  V +   T+T++LP   + ++  GG         DA+  +     A     + ++   +H RF   R GL+  Y AL  L  +   + +    +      P   P   +     ++ EW     N+ QR AV  IV R     P+VIFGPPGTGKT TVIEAILQ+++      ILA  PSD AAD++  RL + +    L+R+NW  R  ASV   ++  C  ++   VF  P+     S+ V+V TC  AGVL   G     FTH+F+DE+ QA EPE +V LS+   +T + L GDP QLG + R+ S+    L  S QERLM   MY+ +      +          T+LVNNYRSH  L+ L S LFY   L   A+  L D+M  WE L       FP++FY + G     +D+  S++NP+E  KV D+I+ +L S+   VST DI VI  +R+QV+ +R +LRA   G VNVG V +FQG E KI I+ST  +      K+ +     +  L D K FNVA+TRA+AL +VVG+PN+LS    W   + +C  +   RG
Sbjct:  181 FCIVVRVRVARVRTADVRALAVDSPPFVPHALRSAFHAP-KRAWGFPSNMHPHHSALSVLLD-----------TSVPQFSPSG---VATPPVDAMELMKLQSQLHLSNNYYRFHTALLRKEETRMAIDMFDYDLFHIRL---VVHQLRSTTSPYVMASLQVPGAVEGRPVLLQGSVVRLR-----------------GDH-----------------VLLAPLEIHGLV--VEVKESTVTLMLPCDTSTLAPQGGRVRRL----DAVEKSPLPTFAPADVCQLYQSSSFHVRFSYPRDGLRMAYRALMHLKPAVLSILTPQSDV-----SPPYEPSLGILDYSTSSIEWINSVINDRQRLAVLHIVNRTSSS-PHVIFGPPGTGKTITVIEAILQVLRHDVAASILAVAPSDAAADILGARLRESLDPSALLRLNWPHRKIASVPGILIGCCHVEAGKDVFSIPDADSLRSFRVIVTTCALAGVLEPAGVTPGHFTHLFVDEACQATEPETVVALSMCDANTHVTLAGDPMQLGPSCRAASSYQFRLVESFQERLMRLPMYECHDENATRI----------TKLVNNYRSHVALISLSSTLFYNRELKACADPRLVDSMCQWEGLRGL--DQFPLVFYSIHGVQQQMMDTAQSFYNPLEAIKVADVIEELLASKTANVSTQDIGVITPYRQQVIRIRLLLRARGFGAVNVGTVYNFQGQEAKITILSTVATTMTSTTKDYRRNDRLVPALSDFKSFNVAITRARALCIVVGHPNVLSRHPLWSYFMGYCAKHGGFRG 901          
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Match: A0A2R6WL95_MARPO (RNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WL95_MARPO)

HSP 1 Score: 357 bits (916), Expect = 4.140e-104
Identity = 258/779 (33.12%), Postives = 391/779 (50.19%), Query Frame = 1
Query:  445 RYRALMWLEESQMAWDVQQYDLHDVFLKTDVKRYKEDDINSWLVAHLEVPGVMENRPRVAIGDVVRLRPAGSGRVEASSKKEMHGGQHWAGNVE--DGWPTDQVDGEVEYPQFEVQ-------ALVTHVNINMGTITMLLPHPGAVVSALGGHNPLTQSYGDAIASAVAKCRAQNHNKEKHKCEGWHARFKLQRHGLQFIYHALDRLAASDARVDSTMGAIRYLFPEPHMLPEAPLWPMPEAAFEWEMRSTNESQRTAVRDIVTRAHGVVPYVIFGPPGTGKTSTVIEAILQLVKLRPRCKILACGPSDTAADVICERLAKY-MSRDRLVRINWWQRLAASVHPAVLPYCTQDSDSGVFLPPENLSYEVVVCTCGTAGVLGLMGF--DQDTFTHIFIDESSQAMEPELLVPLSLAGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQEMYKKYSRTPRALSAPSGTSRCMTQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTDAMLAWEELPKAIYRPFPMIFYGVQGKDCAALDSPSYFNPVECSKVMDIIQGMLESEKVKVSTGDIAVICAFRKQVLILRTILRANNLGNVNVGQVEDFQGGEKKIVIISTTLSRRHRV------EKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLSNEDYWKDLLVFCKDNDAIRGCSCPAL------------EVESRE----------------DRASLVEAVLQQSLLGGAGLDLMYPDD-GAFYD--QDNLQWRVML 2634
            ++  L+ LEE+ M  D++++DL +V L          D + ++   LEVPG+ ENRP V  GD+V +R             E + G   A +V   +  P  Q+   ++ P++ ++        L+ HV      + +   H      A+     L+      I S V+  + ++ +                             ++ S   V+S+    R   P+P +L    +           M+S N+ Q  AV  +V R HG  PY+I GPPGTGKT TV+E +LQ++   P  ++  C PS+ AAD++C  +A   + R  + R+N  +R+ ASV   V P+C     S +    +  S+ V+VCTCG AG+L    +    + F+H+F+DE+ QA+ PE L+PLSLA  +   VLCGDP+QLG  V S  A   GL+ SL  R    E Y          S   G    + +LV NYR++  LL LPS +FY   L+ +A+  +      WEEL     R FPM+FYGV+G+     +SPSYFNPVE  KV+D++ G++   K  +S GDI V+  +R+QV  LR ILR+  LG V VG V+D+QG E+KIV IST L+R   +       K+ +IGFLG+ K+FNVA+TRA+A+ VVVG+P +L+ ++ W +LL +C   DA RG     +            E+E                   + A  +E + + SLLG   +D +YP+D  + Y    + ++WRV L
Sbjct:  408 QFSRLLALEEAAMERDIKEHDLFNVQLS-------RRDASVFI---LEVPGLPENRPSVFAGDIVYIR------------WERYPGMECAADVVAVEFQPKPQLT--LKLPEYFLKWCPLLPKPLLVHVRFTFNRLVLTRMHRALQKVAI-----LSMKLLPCICSKVSTTKVKDAS-----------------------------ISDSPQAVESSDIITRVEIPKP-LLKACGI-----VEHRGAMKSLNQEQWKAVTSVVDRVHGAGPYIILGPPGTGKTVTVVECVLQVLATDPSARLCVCAPSNYAADILCSGIAAGGVDRSMMWRMNDPRRIIASVKVDVSPFCAYQLKSEL---DDMKSFRVIVCTCGAAGMLHEPPYLGKVEPFSHVFVDEAGQALLPEALIPLSLAHSNACRVLCGDPKQLGPVVHSRLATGKGLDDSLISRFEKSEEYH---------SNIGGVGSPVIKLVRNYRANAKLLELPSRMFYNNELIAAAQSHMVTPPKDWEELKG---RDFPMLFYGVKGQQMREGESPSYFNPVEARKVVDLVSGLIS--KTHISAGDIGVMAPYRRQVYKLRLILRSRALGAVRVGTVDDYQGQEEKIVFISTVLTRPESLCKVQADVKDNQIGFLGNAKRFNVAITRAKAMLVVVGHPLVLAQDENWSELLRYCLVRDAFRGFGSQYVPPFRARESAWHAEMEDSSVPNEHNTDHINTSEALEIAKAIEKMAELSLLGMGHVDTLYPEDLDSMYSAFSEEMEWRVQL 1105          
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Match: A0A433SVW3_ELYCH (RNA helicase n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SVW3_ELYCH)

HSP 1 Score: 354 bits (908), Expect = 1.220e-103
Identity = 258/733 (35.20%), Postives = 377/733 (51.43%), Query Frame = 1
Query:  370 VSDPREVAQLAGLVVGASRLEGYVARYRALMWLEESQMAWDVQQYDLHDVFLKTDVKRYKEDDINSWLVAHLEVPGVMENRPRVAIGDVVRLR-------PAGSGRVEASSKKEMHGGQHWAGNVEDGWPTDQVDGEVEYPQFEVQALVTHV---------NINMGTITMLLPHPGAVVSALGGHNPLTQSYGDAIASAVAKCRAQNHNKEKHKCEGWHARFKLQRHGLQFIYHALDRLAASDARVDSTMGAIRYLFPEPHMLPEA----PLWPMP-EAAFEWEMRSTNESQRTAVRDIVTRAHGVVPYVIFGPPGTGKTSTVIEAILQLVKLRPRCKILACGPSDTAADVICERL--AKYMSRDRLVRINWWQRLAASVHPAVLPYCTQDSDSGVFLPPENLS-YEVVVCTCGTAGVLGLMGFDQDTFTHIFIDESSQAMEPELLVPLSL-AGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQEMYKKYSRTPRALSAPSGTSRCM-TQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTDAMLAWEELPKAIYRPFPMIFYGVQGKDCAALDSPSYFNPVECSKVMDIIQGMLESEKVKVSTGDIAVICAFRKQVLILRTILRANNLGNVNVGQVEDFQGGEKKIVIISTTLSRRHRV--EKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLSNEDYWKDLLVFCKDNDAIRGCSCP 2484
            V + RE+ ++A  +V A     Y  R   L+ LEE QM  D++Q+DL  V L+          +  +L   L VPG+ E RP V IGD + L        P+  G V   +  ++H    +  N    +  +  D  VE+  +                  N N   I++L P    V        P      D + S           K+ HK E        Q +G             +++ +D      RY FP+  +  +     P + MP     ++  ++ N+ Q+ AV +I+      VPY+IFGPPGTGKT TV+EAILQ++K  P  +I+AC PS++AAD+I ERL  +  +S+  +VR+N +QR   S+  ++L YC   +D       E++S + V+V TC  AG +  +G      TH+F+DE  QA EPE L+P+ L +G D Q++L GDP+QLG  + S  A+  GLE+SL ERLM +E+Y+   R         G    + T LVNNYRSH  +L LPS LFY   L   A+ SLT  +  W  LPK     FP++F+G++G+D    +SPS+FNP E   VM  +QG L   K  V   DI +I  +RKQ   +R ++   N+  V VG VE+FQG E+K++IIST  S    V  +    +GFL +PK+FNVA+TRAQAL V+VGNP++L+ +  W+ L+  C +N    GC  P
Sbjct:  331 VMEGRELTEIAPYLVQALSAATYARRMSLLLHLEEIQMQMDIRQFDLSRVCLR---------HVGEYLA--LTVPGLAEGRPSVLIGDKIILYSPSDPDGPSYEGYVHELTCTDVH--LKFNSNFHCQYGGE--DYNVEFTFYXXXXXXXXXXXXXXXXXRNFNCFPISVLFPKELEV-------KPPQVKLSDIMPS----------EKDIHKSEP-------QANG-----------EINESYLDQRRPTQRYQFPKRDVCNKTSSSRPEYTMPCSEGLKFFNKNLNQRQKAAVMNILIGQSRPVPYIIFGPPGTGKTITVVEAILQVLKRVPSSRIVACTPSNSAADLIAERLHLSGQVSQTEMVRLNAFQRSCDSLPESILKYCRFANDL------ESISRFRVIVSTCVMAGNMYGLGLSAGHLTHVFVDECGQATEPECLIPVGLVSGTDGQIILAGDPKQLGPIIASPFAKMYGLEMSLLERLMSRELYQ---RDEEKFGENGGFDPSLVTMLVNNYRSHPAILELPSRLFYYSQLRPHADPSLTHTLAGWSLLPKG---GFPVVFHGIRGEDIRENNSPSWFNPGETMLVMRYLQGAL---KEGVDPEDIGIITPYRKQAEKIRLMIERLNMPFVKVGSVEEFQGQERKVIIISTVRSNEKLVGFDVRHTLGFLSNPKRFNVAITRAQALMVLVGNPHVLAQDPNWQVLIKHCSENGGYTGCDLP 998          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10517.701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRN2_ECTSI0.000e+061.77RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5KSW5_9PHAE0.000e+059.07RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A4D9D490_9STRA4.150e-16737.04RNA helicase n=1 Tax=Nannochloropsis salina CCMP17... [more]
A0A835YTD6_9STRA2.020e-15238.11RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2F4L8_9STRA5.630e-12945.70RNA helicase n=1 Tax=Dictyocha speculum TaxID=3568... [more]
A0A8J2S3B2_9STRA4.720e-11035.77RNA helicase n=4 Tax=Pelagomonas calceolata TaxID=... [more]
A0A7S3VA28_9STRA7.960e-10635.03RNA helicase n=2 Tax=Chaetoceros debilis TaxID=122... [more]
A0A485LES7_9STRA1.790e-10433.38RNA helicase n=1 Tax=Aphanomyces stellatus TaxID=1... [more]
A0A2R6WL95_MARPO4.140e-10433.12RNA helicase n=2 Tax=Marchantia polymorpha TaxID=3... [more]
A0A433SVW3_ELYCH1.220e-10335.20RNA helicase n=1 Tax=Elysia chlorotica TaxID=18847... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10517contigP-canaliculata_contig10517:104..8761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1068.1
Seed ortholog evalue2.1e-309
Seed eggNOG ortholog2880.D7FRN2
KEGG rclassRC00379,RC00444,RC00445
KEGG koko:K01756,ko:K13983,ko:K18422
KEGG ReactionR01083,R04559
KEGG Pathwayko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130
KEGG ModuleM00048,M00049
EggNOG free text desc.helicase activity
EggNOG OGsCOG1112@1,KOG1804@2759
Ec32 ortholog descriptionProbable RNA helicase SDE3
Ec32 orthologEc-12_002420.1
EC3.6.4.13,4.3.2.2
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko03036
Hectar predicted targeting categoryother localisation
Exons19
Model size2637
Cds size2637
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815622.3502617-CDS-P-canaliculata_contig10517:103..3341622815622.3502617-CDS-P-canaliculata_contig10517:103..334Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 104..334 +
1693494171.4465055-CDS-P-canaliculata_contig10517:103..3341693494171.4465055-CDS-P-canaliculata_contig10517:103..334Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 104..334 +
1622815622.3629868-CDS-P-canaliculata_contig10517:796..9061622815622.3629868-CDS-P-canaliculata_contig10517:796..906Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 797..906 +
1693494171.459262-CDS-P-canaliculata_contig10517:796..9061693494171.459262-CDS-P-canaliculata_contig10517:796..906Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 797..906 +
1622815622.374382-CDS-P-canaliculata_contig10517:1077..13051622815622.374382-CDS-P-canaliculata_contig10517:1077..1305Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 1078..1305 +
1693494171.4720442-CDS-P-canaliculata_contig10517:1077..13051693494171.4720442-CDS-P-canaliculata_contig10517:1077..1305Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 1078..1305 +
1622815622.3842938-CDS-P-canaliculata_contig10517:2022..21601622815622.3842938-CDS-P-canaliculata_contig10517:2022..2160Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 2023..2160 +
1693494171.480387-CDS-P-canaliculata_contig10517:2022..21601693494171.480387-CDS-P-canaliculata_contig10517:2022..2160Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 2023..2160 +
1622815622.3941996-CDS-P-canaliculata_contig10517:2202..22811622815622.3941996-CDS-P-canaliculata_contig10517:2202..2281Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 2203..2281 +
1693494171.4968145-CDS-P-canaliculata_contig10517:2202..22811693494171.4968145-CDS-P-canaliculata_contig10517:2202..2281Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 2203..2281 +
1622815622.4055984-CDS-P-canaliculata_contig10517:2595..28201622815622.4055984-CDS-P-canaliculata_contig10517:2595..2820Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 2596..2820 +
1693494171.5083597-CDS-P-canaliculata_contig10517:2595..28201693494171.5083597-CDS-P-canaliculata_contig10517:2595..2820Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 2596..2820 +
1622815622.4198785-CDS-P-canaliculata_contig10517:2953..30701622815622.4198785-CDS-P-canaliculata_contig10517:2953..3070Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 2954..3070 +
1693494171.5222836-CDS-P-canaliculata_contig10517:2953..30701693494171.5222836-CDS-P-canaliculata_contig10517:2953..3070Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 2954..3070 +
1622815622.4318109-CDS-P-canaliculata_contig10517:3300..33961622815622.4318109-CDS-P-canaliculata_contig10517:3300..3396Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 3301..3396 +
1693494171.539347-CDS-P-canaliculata_contig10517:3300..33961693494171.539347-CDS-P-canaliculata_contig10517:3300..3396Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 3301..3396 +
1622815622.4417017-CDS-P-canaliculata_contig10517:3812..39141622815622.4417017-CDS-P-canaliculata_contig10517:3812..3914Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 3813..3914 +
1693494171.5540636-CDS-P-canaliculata_contig10517:3812..39141693494171.5540636-CDS-P-canaliculata_contig10517:3812..3914Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 3813..3914 +
1622815622.4515252-CDS-P-canaliculata_contig10517:4421..45651622815622.4515252-CDS-P-canaliculata_contig10517:4421..4565Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 4422..4565 +
1693494171.5652754-CDS-P-canaliculata_contig10517:4421..45651693494171.5652754-CDS-P-canaliculata_contig10517:4421..4565Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 4422..4565 +
1622815622.4636838-CDS-P-canaliculata_contig10517:4888..49931622815622.4636838-CDS-P-canaliculata_contig10517:4888..4993Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 4889..4993 +
1693494171.5752614-CDS-P-canaliculata_contig10517:4888..49931693494171.5752614-CDS-P-canaliculata_contig10517:4888..4993Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 4889..4993 +
1622815622.4802752-CDS-P-canaliculata_contig10517:5449..56291622815622.4802752-CDS-P-canaliculata_contig10517:5449..5629Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 5450..5629 +
1693494171.584393-CDS-P-canaliculata_contig10517:5449..56291693494171.584393-CDS-P-canaliculata_contig10517:5449..5629Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 5450..5629 +
1622815622.4917734-CDS-P-canaliculata_contig10517:5942..60191622815622.4917734-CDS-P-canaliculata_contig10517:5942..6019Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 5943..6019 +
1693494171.5981061-CDS-P-canaliculata_contig10517:5942..60191693494171.5981061-CDS-P-canaliculata_contig10517:5942..6019Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 5943..6019 +
1622815622.5047262-CDS-P-canaliculata_contig10517:6398..65881622815622.5047262-CDS-P-canaliculata_contig10517:6398..6588Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 6399..6588 +
1693494171.6062193-CDS-P-canaliculata_contig10517:6398..65881693494171.6062193-CDS-P-canaliculata_contig10517:6398..6588Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 6399..6588 +
1622815622.5140398-CDS-P-canaliculata_contig10517:6790..68501622815622.5140398-CDS-P-canaliculata_contig10517:6790..6850Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 6791..6850 +
1693494171.616055-CDS-P-canaliculata_contig10517:6790..68501693494171.616055-CDS-P-canaliculata_contig10517:6790..6850Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 6791..6850 +
1622815622.5241501-CDS-P-canaliculata_contig10517:7292..73821622815622.5241501-CDS-P-canaliculata_contig10517:7292..7382Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 7293..7382 +
1693494171.6257286-CDS-P-canaliculata_contig10517:7292..73821693494171.6257286-CDS-P-canaliculata_contig10517:7292..7382Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 7293..7382 +
1622815622.5351095-CDS-P-canaliculata_contig10517:7698..77581622815622.5351095-CDS-P-canaliculata_contig10517:7698..7758Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 7699..7758 +
1693494171.63579-CDS-P-canaliculata_contig10517:7698..77581693494171.63579-CDS-P-canaliculata_contig10517:7698..7758Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 7699..7758 +
1622815622.5494714-CDS-P-canaliculata_contig10517:8029..82901622815622.5494714-CDS-P-canaliculata_contig10517:8029..8290Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 8030..8290 +
1693494171.6510506-CDS-P-canaliculata_contig10517:8029..82901693494171.6510506-CDS-P-canaliculata_contig10517:8029..8290Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 8030..8290 +
1622815622.5642407-CDS-P-canaliculata_contig10517:8617..87611622815622.5642407-CDS-P-canaliculata_contig10517:8617..8761Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 8618..8761 +
1693494171.6639793-CDS-P-canaliculata_contig10517:8617..87611693494171.6639793-CDS-P-canaliculata_contig10517:8617..8761Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10517 8618..8761 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10517.701.1prot_P-canaliculata_contig10517.701.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig10517 104..8761 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10517.701.1

>prot_P-canaliculata_contig10517.701.1 ID=prot_P-canaliculata_contig10517.701.1|Name=mRNA_P-canaliculata_contig10517.701.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=879bp
SQAGFSGKWLTLSLSAVDPPPPHLPRFQLLDRVHRSFVLGTRLLAQAVDK
GATTALNAEARRFVPLVHRRWFSFPVKGVVAIPPERNPFFLPQLRVLDPA
EYPVPEAVETRFHHFAESKIPWVVSDPREVAQLAGLVVGASRLEGYVARY
RALMWLEESQMAWDVQQYDLHDVFLKTDVKRYKEDDINSWLVAHLEVPGV
MENRPRVAIGDVVRLRPAGSGRVEASSKKEMHGGQHWAGNVEDGWPTDQV
DGEVEYPQFEVQALVTHVNINMGTITMLLPHPGAVVSALGGHNPLTQSYG
DAIASAVAKCRAQNHNKEKHKCEGWHARFKLQRHGLQFIYHALDRLAASD
ARVDSTMGAIRYLFPEPHMLPEAPLWPMPEAAFEWEMRSTNESQRTAVRD
IVTRAHGVVPYVIFGPPGTGKTSTVIEAILQLVKLRPRCKILACGPSDTA
ADVICERLAKYMSRDRLVRINWWQRLAASVHPAVLPYCTQDSDSGVFLPP
ENLSYEVVVCTCGTAGVLGLMGFDQDTFTHIFIDESSQAMEPELLVPLSL
AGPDTQLVLCGDPRQLGAAVRSTSARTLGLEISLQERLMGQEMYKKYSRT
PRALSAPSGTSRCMTQLVNNYRSHEVLLRLPSVLFYGGSLLRSAERSLTD
AMLAWEELPKAIYRPFPMIFYGVQGKDCAALDSPSYFNPVECSKVMDIIQ
GMLESEKVKVSTGDIAVICAFRKQVLILRTILRANNLGNVNVGQVEDFQG
GEKKIVIISTTLSRRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNP
NLLSNEDYWKDLLVFCKDNDAIRGCSCPALEVESREDRASLVEAVLQQSL
LGGAGLDLMYPDDGAFYDQDNLQWRVML*
back to top

mRNA from alignment at P-canaliculata_contig10517:104..8761+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10517.701.1 ID=mRNA_P-canaliculata_contig10517.701.1|Name=mRNA_P-canaliculata_contig10517.701.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=8658bp|location=Sequence derived from alignment at P-canaliculata_contig10517:104..8761+ (Pelvetia canaliculata dioecious)
TCTCAGGCGGGATTCTCGGGGAAATGGCTGACTCTGTCGTTGTCAGCGGT CGATCCGCCACCGCCGCATTTGCCGCGGTTCCAGCTTCTGGACCGAGTTC ATCGCTCCTTCGTCCTGGGGACCAGGCTCCTTGCGCAAGCTGTCGACAAG GGCGCGACGACGGCTCTCAACGCCGAGGCCAGGCGTTTTGTGCCCCTGGT GCATCGGCGGTGGTTTAGCTTTCCTGTCAAGGTCGGGGCAATAACGCACG CGTTCGAAGCAGGGGTGTAGGGTGCGGGTTTGACGAACGTGCTGTGGTTC TACGCTTTGACATCAGGGGTTTGTGTCGATGTCATGTAGATCTTCGCTCG GCGCTGTTTCTGATTTAGGAAGAGAGAACGACCCTTGAATCTGACTCTCG GAGTCGAAGAACTTGTACGTTTGTCTTCAGCTGTAAATGGATAAAGGGAT GGGGGGCGGGGACGATTTCTGCCGATGGCGTTTCCTGGCGGGGTTGGGTA AGCGTGACATCTCGATACCAGCGTTCACGTTGGCTACTCTGACTATGTAT CTGCGACAACATCGATAAAATATACCTATAATAGTATGAATCAGACTTGA TCGCATCACACCGCATTGCCTGTGTCTGTGCGACCTGTTGCCGCTTCTGT TGCCGTATTCTCGTGGCTTACCTTACCACATATTTTGTGACAGGGTGTCG TGGCCATCCCTCCGGAGAGAAATCCTTTCTTTTTGCCGCAGCTGAGGGTA TTAGACCCCGCCGAGTACCCAGTACCAGAGGCCGTGGAAACGCGATTCCA CCAGTGAGTGCGCCGACGACGTCAAGTTCCTCAACCTGCCGTACCGGACC GGACCGCATTACTTTTTATCCTGTGATGCCCGTCGTGTAACGACGTGTCT CAGAGCTTTCCACCTATTTTATTCCCCGCGGACGCATGCCCTGTCTTATA TCACTTCATGCGGTTGTGGTCCAGTTTCGCTGAATCCAAGATCCCTTGGG TAGTGAGCGACCCTCGCGAGGTTGCGCAGCTGGCGGGGTTGGTTGTCGGG GCGAGCAGGCTCGAGGGCTACGTCGCAAGGTACCGTGCACTGATGTGGCT GGAGGAGAGCCAGATGGCGTGGGACGTGCAGCAGTATGACCTGCACGACG TGTTCCTGAAGACGGACGTCAAGCGGTATAAGGAAGATGATATCAACAGC TGGTGAGCAGCGAGCGCCGCGAGATGGAAGGAGTCTGGGAAGCCCTCGGC GGATGTTGCTCCGTAGGCTTCAAGAAAACCTATCCCCACTATGAATTGTA GGGGAAAACTTCGGCATATTTTTCCTGGTCCATGATCTGGTACGGGTTGT TCTCAACTGTGTTCAATTTGTATCTATAGTACTGTGGTGATGATCTTGTC CAGTACGTGTCGCTGTTCGCTGCGTGAGATTGCTTTTCAGCAGGAAACCC AAGCAGCTACTGTGGCCCTTTGACGTGAGATCACTTTCTTCCGATGGAAT CAGACACTTGCAAGGTTCCCAATCAAGCTTACGACAAAATTGCCCGTCCC GCATGTGGTCTCTTAAGAGATCAACCCATCTCTCTCCGGTTCACGGCCAA CGGCTTTTCATGCCGATGCAAGTTCTGTACTCCTACACCACGTCAACCAA TAACAACGGTTGAATCTTACTTATGGTACCTGATATTAACTTTTCCGTGC TTTCCGCTTCGGAAAAACCTGTGGAGACTCGAACTCACAGATTTTGTGAA ATAGGTCTACGTGGTTACCCGTATTATCACAGCTGAAGGCCTGCGCTGCA CGTGCCTTTCGAATGAGAATTGCACCAAAGCCATTTTTAGCTTGTCGACA TGATATTTCCTATTCTCCGAACCTCTTCAACGAAACCTATCTCACCGCAC TCCGCAACTCCCACGCAAGGCTGGTCGCTCACCTGGAGGTTCCTGGCGTG ATGGAGAATCGGCCTCGGGTAGCCATCGGGGACGTTGTCAGGCTTCGACC GGCAGGGTCAGGCCGCGTCGAGGCCAGTAGCAAAAAAGAGATGCATGGCG GTCAGCAGTGGCAGCAGCAGTGGCAGCAGCAGCGGCAGCGGCAAAAGAGT TGGGCGGGGAATGTGGAAGATGGATGGCCGACAGATCAGGTGGACGGGGA GGTGGAATATCCCCAGTTCGAGGTTCAGGTAAGAAAGCTCACAAGGATTT CAAAACCTTTTGGTAAAAGGTGAAAACTTAATGCTGTCTTTTTTTTTTTC GTGACGTGTAAGGCATGGAGGAGATTCAAGGAGTCAAGGACACTCGATCG CCCAGAACAGTGGAGAAACTGTCTCCTTCCGCTTCGCAGGATCGAACAGA TCTCGCTGATTCCCGAAAAAAATCGAGCTTCTGCCCTGGTAGAAAGTCGA ATATATCGGGCATCGGTAGGCCAATGCAGGGCGAAAAAGCGATGAGCCAG CGCTCCGCGGTCTCCTTCTGTCGTGCTCCTTTTCGTTTCCAGGCGCTGGT GACCCACGTTAACATCAATATGGGGACAATAACGATGCTCCTGCCACACC CGGGCGCGGTTGTATCCGCTCTGGGCGGCCACAACCCCTTGACGCAGAGC TACGGCGACGCGATCGCGAGCGCCGTGGCCAAGTGTCGAGCGCAGAACCA CAACAAGGAAAAGCACAAGTGTGAGGGCTGGCACGCGCGCTTCAAGCTGC AGCGACACGGCTTGCAGGTGACCCAGCGAATCGCTCCGAAGCTGCGGTAC GTGGATGGATGCGTCGTGACAAAACATAGGAGTTTCTACAAGTATCGCCT TCCTACTTTACCGAAACCTCTGCACTTTTTTTTGCCTGCCTCGACCCCAG TTCATTTATCACGCTCTCGACAGACTTGCTGCGTCTGACGCCAGGGTTGA CAGCACCATGGGGGCGATTCGCTACCTCTTCCCTGAGCCCCACATGCTGC CGGAGGCGCCGCTTTGGGTGAGGAGAAGTACAGCGTGTCAAGAGTGGGTT AGGGTTAGGGCGCGTGTTGGCCTTGGCCTCCATACTCTCTTTTTATTTTT TGCATTTCGTCCATGACGTTCGACCCTTCTTCGTGTAAAATACCTTGTAA GTAACAAGTGTACCATGTACAGTATGTTTCTTGTTGACGCCTCTGTGCAG ACCGACCTCACGTCGCGTGTTCGGCGCGTTTTTGTTGCTGCGCGCAGCCT ATGCCCGAGGCCGCTTTCGAGTGGGAGATGCGTTCCACCAACGAGTCGCA GCGCACGGCTGTAAGAGACATCGTCACCAGAGCCCATGGGGTGGTGAGTC GGAATCGGTCGGCGAACAACTCTACTTCAGAATTTGTACAGTGGTTCGCC AAAAGCAGCCTGTTGCTGTGCAGAGCCTCGCCTTGGACGGCGATGGCGGT GTCCTGTGCTTTTTTGGGGAAGGGGTTCTGCAGTATTTGTGCCATTTCTG GCACACGCAGGATTTGTTCAAAGGCCTTATTTTCCTGTGTAAAAAATATG TGCCTCGATCCCTTGTACAACATCGTCATCCCTAGCATGTAGAGAACACA CCTGGTACATAATACCGACAAGAAGATCAATACCGTCAATTCCGTCAATT CCATCAATCGCATCAATAACGCCAACACTGTATCCAAGAGAGCACGTTTT GTTCTGAACATAGTACCATACTCTATTTTGTGGTTTTACTTGTTTTTCAT GTCGCGCAGGTGCCGTACGTGATCTTCGGGCCGCCAGGTACGGGCAAGAC GTCCACGGTAATCGAGGCAATCTTGCAGCTCGTCAAACTTCGCCCTCGTT GCAAGATCCTGGTGAGAGGAGAGCTTCTCGTGCAGCAGTGCAACAGTGCA GTACCAAATGCCAGTGTCAACGCCAAGCTCCTACGGACACTAGAACTATA ATAATACCCTCGCCTCTTGTCTCGAAGCTCTGAAATTCAACTGTCGTTTA TTCTGGTACAACACGTTCGAACAACCGACTGACTTACAAACTACTAGAGC GAGCAAAATTCTTGCCCATTTATTTTCTTGGCGATGGGTTCTTGGAGATG TTTATATCGTTTGGTGGCTTTTGTTTGTACTCTCATCCCGCCGCCATGGT CGTTATTTGAACATAATGTTACAACAAGTTTATTAGACCTAAAGCGCTCT AGAGCTACTAGTCAACTTATCACCTCTTGGGGCATTTTTCGACTGCGTTC GCGCGTGGTACGCCTTCCCTCCAGAGGACGCGTTTCCATACTCAGCACGC TTCTATCGTCCTGTTTTGCGCATGTTTGTCTACGATGTCAAATATCTGAC GTGTATCTTGTCAAAAAGGCTTGTGGGCCATCTGACACGGCCGCTGATGT CATCTGTGAGCGATTGGCCAAGTACATGTCAAGAGATCGCCTCGTTCGGA TCAACTGGTGGCAAAGGCTGGCGGCGTCTGTCCACCCTGCAGTCCTGCCC TATTGCACACAGGTACTATCAATAGTGATACAGTAGTACTAGAGCTGCAG TGCCCTATTCTACCAACACCAGTACGTATTGCATCTGCTGCCTCTGCTGC TCCTACCATATATAAAACGAAGCTTGAACATACTATTACTACTACAGTAG GTCAGCGCATGCGTAAGAATTTATTTTCTTTCGAGTACAAGTATAGAGGT AAGCTCAAGCGATGGATCATGCCGCTCAAGACCCCTGTATTCTCGTGTAT GCTCTGAGGTTACGCGTGTAATTTTGTGACTTGCGTTGCCATATTCCGTG GGACTATCGATCTTCGCCCTCCTGAATGGGGCCAGGATTCGGATAGCGGG GTGTTCCTGCCACCCGAGAATCTGTCATATGAGGTAGTTGTCTGCACGTG CGGAACCGCTGGAGTGCTGGGCCTGATGGGCTTCGATCAGGTATGCCTCC CACCCACTTTACTTCGAAGTAGGCCGAATTAAAGACAAGGACAAATTTGT ATTGGTTCGAAGGTTTTGTTCAGAGAACTCCGGAGTAGAAAGACCAGGAA TCCGGAGCAAGAGCATGAGTATGCTGCATTACCGGCAAAGATGGATAGGA CTGTGCTTTGAGGAGAGGACGCTCGTTGTGGCGCTTGACTTTGAAGTTAT ATCGCGTCACTTATCAATAGTATTCGCACAATCACACGAGTATGTCCTCT TGCTGTGCTGTCGTGAGCCTCCAACTTCCTCTGGGATAGCAGCGAACAGT CAAGCAGAATGCGTGCCTTCAAATTGCCTCCAAAAACAGTCTCTGTTTTC CACGTACGTCTACAGGATGCTTGCCCGCTGGGACTTTGTTTTCATTCTTT CGGCGTCCCGCTCCGGGAACGGATTACTAATACTCGACGTTAGCAGGACA CCTTCACACACATATTCATCGACGAGAGCTCGCAAGCCATGGAGCCGGAG CTTTTGGTGCCGCTGTCGCTGGCAGGCCCGGACACTCAGCTGGTTCTTTG CGGAGACCCGAGACAGCTTGGGGCTGCGGTCAGAAGTACCTCTGCGAGAA CTCTCGGCCTGGAGATCTCTCTCCAGGTAGGCACCATCGTGTTTGCCTAA ATATGCACCATGGACATGGTCGTGTGCGTGTTTGGACGCCTGGTTGGCCC CTACAAACTCCCGAGAAGACTCGTGTAGTACGTTAACTGCTATAACCTCC TCGCTAACGATGCAATGGAATAAGATAAGCGACAGAAGGGACACACTGTC ACGCGTGGTACGCACAGTAGCGTCACAGCAGTAGTTCATAGGTCATAGAT TGTGCCCCAACCCAAAAGCGTTTCACCCCGAATGACCTGTCCACGACTGC GCGATGGCCATGACGTTTGTCAATCTGTCTCTCTCCTAGGAACGACTGAT GGGTCAAGAAATGTACAAGAAATACTCCAGGACCCCGAGGGCGCTGTCGG CGCCGAGTGGGACGAGGTGAGCTTCACGACATCCTTCCACTATTAATACG CCACGATTTACAAACTAAATTCAGTATCTTTGGATTATGCTCGGCTAATT CAAATGAGGAACCAAAGTTAGGCCTCACCGCGCTTTCGTGCACCATACTC TAATAATAATATATTATCCCGTTCTACACCTCATGCTTTGGTGTAACACT GAACTGTGTCTCGAGAACAAGAAATATTTTATTTTGTGGTGGCGATGCTA CCTGTCTTGAGTTATCACGAAGTTTTTCACCTATATCTCCCGGAGCGAGT GTCATCATTTGCTCTCTTCTCTCTTTTTTAGTCTCCTGCGGTTCCTATCG TGGCCCTCTGGCGGTTTCTTTCTGTGCATTCTCGCTCAATCACAGCAGAT GCATGACGCAACTGGTCAACAACTACCGGTCGCACGAGGTCCTCCTCAGG CTGCCGAGCGTGCTGTTTTACGGCGGCAGCCTATTGCGGAGCGCCGAGCG CTCGCTGACCGATGCGATGCTGGCGTGGGAAGAGCTGCCCAAGGCTATTT ATAGGCCATTTCCGATGATATTCTACGGCGTTCAGGTACAGGCGCAGTCT TGAAACCGGTGTGTGCTTTGCATTGCAAACTCGTGGAAAAATGAGGATAG TCATAAGGGCGAGCTCGAGCGCTGTTGATATTTAAAACATTCGCGGACAC TTTGGTCTATGCATCATGACCATCTCATCTTTGACGCTGCTTCGTGCGGC GGGTGCAACTACGTCCTGTGTTGATTTGCCTCGAAAGGGCAAAGACTGCG CCGCTCTGGACTCTCCTTCGTACTTCAACCCGGTGGAGTGCTCGAAGGTA AGGGCTCGTGGCATGTCCTGTGGTTTTCTTTTATTTCGTCTTGAGTCGAT TGTACGAAGTACTGGAGTATCATTTAGCGTGCTATTGATAAAAAACAATC AATTCTGCAATAATGCCCACCCCGCTTGTGGTCCTACCAGCTACCCCTCT CCCCACCAAGCTATATACTGTATAGTATACTAATAGGCCATTACTGCCCG TCTCGCTTATGTTCCTATGGGTAACTAGTCTCCTACACCCCATGGAACCA TTTACTGGGTGTTAGATGATGACAGATGACGTGGTCTTGGGTTGGAGTTA CAGGAGTCACATGTCCATTCAGCAACTGTATTACCACGGCAAAGTACTTG TTATGAAACCCGATCACGATCTCGCCTTGAACGGTGTGCTTCCCTCCAAC CCTTTTCTTATCGCGATGGGCCCGATGACCGCTTTGAAGGTGATGGATAT TATACAGGGTATGCTTGAAAGCGAGAAGGTCAAGGTGTCTACTGGAGACA TCGCCGTCATCTGCGCCTTCCGAAAGCAGGTCAGGTGCAGGTCAAGTACA GACAAGATGTATTTTTCCCACGTGCACGCATCTCTGTTCTCGACTTTTTG CCTCGTGTGTTACTTCACTCTCCATTCGAGATATATTCCAAAAGCTGCCG TACATGGATCACATGGGATCACAGTTCTTCTAAAACAAGCAAGGTAGACG CTGTGATGTACAGCTGATGTTTTTTTGGGGGGCATTGGCTGGTTAGAACT GAGCCTCGGTTGCTTACGGGATGCAATGACCCCGATCTCTGCGAAAGTGC GAATCGTGACTATTAAATAATGTCCAAATATACATGTAATTTCAGGTGCT GATTTTGAGGACGATACTCAGAGCCAACAATCTCGGAAACGTGAACGTCG GCCAGGTGGGTTTCCCCAACGCCTTTAACGCATCGTTTCGTTTGCTCTCG GTATAATGTCGTGCGGTTGGCCTCTTCAGCGTGTACCTTGCTCAGAAGAA CTCAGACAAAATCTCGAGTCTGCGTGCGCATTATACATGCAGATTGGAAA TTGCAGACTTCTACAGACGCGATCTATGCTGCACCCCGGATGCGGAGAAT ATCAAGCCCGCGGCAACTCGCGCAACGTGGTACTGTTCCGACGCCGTCTC TCTTTCCCGTGTTGGGGTTATATTAGGTGGAGGATTTTCAGGGAGGCGAA AAAAAAATCGTCATCATCAGCACCACCTTGTCGAGGAGGCATCGGGTTGA GAAGGAGGGCAAGATTGGCTTCCTCGGCGACCCTAAGAAGTTCAACGTCG CGCTCACCCGCGCACAAGCTCTGGCGGTGGTGGTCGGGAACCCTAATCTG CTGTCGAACGAAGACTATTGGAAAGACCTGCTGGTGTTTTGCAAGGACAA CGATGCGATTCGAGGCTGCTCGTGCCCCGCCTTGGAGGTATTTTATAGCT ATGATGCACGAGAATGTATAGTCAGTACAGTTGTCAGTCGGAATACCGTG CGTTGTCCGGTATACCGTGCGTCATCCGAGCCTCGTGAAAAGGCGACGTG TGCAGACCTGCGCTGATGCTCAAATTGATGTGTGCGATGGTGTACAGTGT AGGCAATGTGGTCGGATTTCGTCATAACAGAGCAAAACAAAAAATGAGAG AGAGCAATTTTTCACCACATGCCTTCAAGTTGTAGGACCTAACTAAATTA GAGCTTAGAATTTGGATAACCTCTACACTATTTCAAATAAACTTGTACAC ACTCGGCGCGGCAGGTGGAAAGCAGGGAGGATAGAGCAAGCCTCGTGGAG GCGGTGCTTCAGCAGAGCCTGCTTGGGGGTGCGGGGTTGGATCTGATGTA TCCAGACGACGGCGCTTTTTACGACCAAGACAATTTGCAATGGCGGGTCA TGCTGTAG
back to top

Coding sequence (CDS) from alignment at P-canaliculata_contig10517:104..8761+

>mRNA_P-canaliculata_contig10517.701.1 ID=mRNA_P-canaliculata_contig10517.701.1|Name=mRNA_P-canaliculata_contig10517.701.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=5274bp|location=Sequence derived from alignment at P-canaliculata_contig10517:104..8761+ (Pelvetia canaliculata dioecious)
TCTCAGGCGGGATTCTCGGGGAAATGGCTGACTCTGTCGTTGTCAGCGGT
CGATCCGCCACCGCCGCATTTGCCGCGGTTCCAGCTTCTGGACCGAGTTC
ATCGCTCCTTCGTCCTGGGGACCAGGCTCCTTGCGCAAGCTGTCGACAAG
GGCGCGACGACGGCTCTCAACGCCGAGGCCAGGCGTTTTGTGCCCCTGGT
GCATCGGCGGTGGTTTAGCTTTCCTGTCAAGTCTCAGGCGGGATTCTCGG
GGAAATGGCTGACTCTGTCGTTGTCAGCGGTCGATCCGCCACCGCCGCAT
TTGCCGCGGTTCCAGCTTCTGGACCGAGTTCATCGCTCCTTCGTCCTGGG
GACCAGGCTCCTTGCGCAAGCTGTCGACAAGGGCGCGACGACGGCTCTCA
ACGCCGAGGCCAGGCGTTTTGTGCCCCTGGTGCATCGGCGGTGGTTTAGC
TTTCCTGTCAAGGGTGTCGTGGCCATCCCTCCGGAGAGAAATCCTTTCTT
TTTGCCGCAGCTGAGGGTATTAGACCCCGCCGAGTACCCAGTACCAGAGG
CCGTGGAAACGCGATTCCACCAGGTGTCGTGGCCATCCCTCCGGAGAGAA
ATCCTTTCTTTTTGCCGCAGCTGAGGGTATTAGACCCCGCCGAGTACCCA
GTACCAGAGGCCGTGGAAACGCGATTCCACCATTTCGCTGAATCCAAGAT
CCCTTGGGTAGTGAGCGACCCTCGCGAGGTTGCGCAGCTGGCGGGGTTGG
TTGTCGGGGCGAGCAGGCTCGAGGGCTACGTCGCAAGGTACCGTGCACTG
ATGTGGCTGGAGGAGAGCCAGATGGCGTGGGACGTGCAGCAGTATGACCT
GCACGACGTGTTCCTGAAGACGGACGTCAAGCGGTATAAGGAAGATGATA
TCAACAGCTGTTTCGCTGAATCCAAGATCCCTTGGGTAGTGAGCGACCCT
CGCGAGGTTGCGCAGCTGGCGGGGTTGGTTGTCGGGGCGAGCAGGCTCGA
GGGCTACGTCGCAAGGTACCGTGCACTGATGTGGCTGGAGGAGAGCCAGA
TGGCGTGGGACGTGCAGCAGTATGACCTGCACGACGTGTTCCTGAAGACG
GACGTCAAGCGGTATAAGGAAGATGATATCAACAGCTGGCTGGTCGCTCA
CCTGGAGGTTCCTGGCGTGATGGAGAATCGGCCTCGGGTAGCCATCGGGG
ACGTTGTCAGGCTTCGACCGGCAGGGTCAGGCCGCGTCGAGGCCAGTAGC
AAAAAAGAGATGCATGGCGGTCAGCAGCTGGTCGCTCACCTGGAGGTTCC
TGGCGTGATGGAGAATCGGCCTCGGGTAGCCATCGGGGACGTTGTCAGGC
TTCGACCGGCAGGGTCAGGCCGCGTCGAGGCCAGTAGCAAAAAAGAGATG
CATGGCGGTCAGCATTGGGCGGGGAATGTGGAAGATGGATGGCCGACAGA
TCAGGTGGACGGGGAGGTGGAATATCCCCAGTTCGAGGTTCAGTTGGGCG
GGGAATGTGGAAGATGGATGGCCGACAGATCAGGTGGACGGGGAGGTGGA
ATATCCCCAGTTCGAGGTTCAGGCGCTGGTGACCCACGTTAACATCAATA
TGGGGACAATAACGATGCTCCTGCCACACCCGGGCGCGGTTGTATCCGCT
CTGGGCGGCCACAACCCCTTGACGCAGAGCTACGGCGACGCGATCGCGAG
CGCCGTGGCCAAGTGTCGAGCGCAGAACCACAACAAGGAAAAGCACAAGT
GTGAGGGCTGGCACGCGCGCTTCAAGCTGCAGCGACACGGCTTGCAGGCG
CTGGTGACCCACGTTAACATCAATATGGGGACAATAACGATGCTCCTGCC
ACACCCGGGCGCGGTTGTATCCGCTCTGGGCGGCCACAACCCCTTGACGC
AGAGCTACGGCGACGCGATCGCGAGCGCCGTGGCCAAGTGTCGAGCGCAG
AACCACAACAAGGAAAAGCACAAGTGTGAGGGCTGGCACGCGCGCTTCAA
GCTGCAGCGACACGGCTTGCAGTTCATTTATCACGCTCTCGACAGACTTG
CTGCGTCTGACGCCAGGGTTGACAGCACCATGGGGGCGATTCGCTACCTC
TTCCCTGAGCCCCACATGCTGCCGGAGGCGCCGCTTTGGTTCATTTATCA
CGCTCTCGACAGACTTGCTGCGTCTGACGCCAGGGTTGACAGCACCATGG
GGGCGATTCGCTACCTCTTCCCTGAGCCCCACATGCTGCCGGAGGCGCCG
CTTTGGCCTATGCCCGAGGCCGCTTTCGAGTGGGAGATGCGTTCCACCAA
CGAGTCGCAGCGCACGGCTGTAAGAGACATCGTCACCAGAGCCCATGGGG
TGCCTATGCCCGAGGCCGCTTTCGAGTGGGAGATGCGTTCCACCAACGAG
TCGCAGCGCACGGCTGTAAGAGACATCGTCACCAGAGCCCATGGGGTGGT
GCCGTACGTGATCTTCGGGCCGCCAGGTACGGGCAAGACGTCCACGGTAA
TCGAGGCAATCTTGCAGCTCGTCAAACTTCGCCCTCGTTGCAAGATCCTG
GTGCCGTACGTGATCTTCGGGCCGCCAGGTACGGGCAAGACGTCCACGGT
AATCGAGGCAATCTTGCAGCTCGTCAAACTTCGCCCTCGTTGCAAGATCC
TGGCTTGTGGGCCATCTGACACGGCCGCTGATGTCATCTGTGAGCGATTG
GCCAAGTACATGTCAAGAGATCGCCTCGTTCGGATCAACTGGTGGCAAAG
GCTGGCGGCGTCTGTCCACCCTGCAGTCCTGCCCTATTGCACACAGGCTT
GTGGGCCATCTGACACGGCCGCTGATGTCATCTGTGAGCGATTGGCCAAG
TACATGTCAAGAGATCGCCTCGTTCGGATCAACTGGTGGCAAAGGCTGGC
GGCGTCTGTCCACCCTGCAGTCCTGCCCTATTGCACACAGGATTCGGATA
GCGGGGTGTTCCTGCCACCCGAGAATCTGTCATATGAGGTAGTTGTCTGC
ACGTGCGGAACCGCTGGAGTGCTGGGCCTGATGGGCTTCGATCAGGATTC
GGATAGCGGGGTGTTCCTGCCACCCGAGAATCTGTCATATGAGGTAGTTG
TCTGCACGTGCGGAACCGCTGGAGTGCTGGGCCTGATGGGCTTCGATCAG
GACACCTTCACACACATATTCATCGACGAGAGCTCGCAAGCCATGGAGCC
GGAGCTTTTGGTGCCGCTGTCGCTGGCAGGCCCGGACACTCAGCTGGTTC
TTTGCGGAGACCCGAGACAGCTTGGGGCTGCGGTCAGAAGTACCTCTGCG
AGAACTCTCGGCCTGGAGATCTCTCTCCAGGACACCTTCACACACATATT
CATCGACGAGAGCTCGCAAGCCATGGAGCCGGAGCTTTTGGTGCCGCTGT
CGCTGGCAGGCCCGGACACTCAGCTGGTTCTTTGCGGAGACCCGAGACAG
CTTGGGGCTGCGGTCAGAAGTACCTCTGCGAGAACTCTCGGCCTGGAGAT
CTCTCTCCAGGAACGACTGATGGGTCAAGAAATGTACAAGAAATACTCCA
GGACCCCGAGGGCGCTGTCGGCGCCGAGTGGGACGAGGAACGACTGATGG
GTCAAGAAATGTACAAGAAATACTCCAGGACCCCGAGGGCGCTGTCGGCG
CCGAGTGGGACGAGCAGATGCATGACGCAACTGGTCAACAACTACCGGTC
GCACGAGGTCCTCCTCAGGCTGCCGAGCGTGCTGTTTTACGGCGGCAGCC
TATTGCGGAGCGCCGAGCGCTCGCTGACCGATGCGATGCTGGCGTGGGAA
GAGCTGCCCAAGGCTATTTATAGGCCATTTCCGATGATATTCTACGGCGT
TCAGCAGATGCATGACGCAACTGGTCAACAACTACCGGTCGCACGAGGTC
CTCCTCAGGCTGCCGAGCGTGCTGTTTTACGGCGGCAGCCTATTGCGGAG
CGCCGAGCGCTCGCTGACCGATGCGATGCTGGCGTGGGAAGAGCTGCCCA
AGGCTATTTATAGGCCATTTCCGATGATATTCTACGGCGTTCAGGGCAAA
GACTGCGCCGCTCTGGACTCTCCTTCGTACTTCAACCCGGTGGAGTGCTC
GAAGGGCAAAGACTGCGCCGCTCTGGACTCTCCTTCGTACTTCAACCCGG
TGGAGTGCTCGAAGGTGATGGATATTATACAGGGTATGCTTGAAAGCGAG
AAGGTCAAGGTGTCTACTGGAGACATCGCCGTCATCTGCGCCTTCCGAAA
GCAGGTGATGGATATTATACAGGGTATGCTTGAAAGCGAGAAGGTCAAGG
TGTCTACTGGAGACATCGCCGTCATCTGCGCCTTCCGAAAGCAGGTGCTG
ATTTTGAGGACGATACTCAGAGCCAACAATCTCGGAAACGTGAACGTCGG
CCAGGTGCTGATTTTGAGGACGATACTCAGAGCCAACAATCTCGGAAACG
TGAACGTCGGCCAGGTGGAGGATTTTCAGGGAGGCGAAAAAAAAATCGTC
ATCATCAGCACCACCTTGTCGAGGAGGCATCGGGTTGAGAAGGAGGGCAA
GATTGGCTTCCTCGGCGACCCTAAGAAGTTCAACGTCGCGCTCACCCGCG
CACAAGCTCTGGCGGTGGTGGTCGGGAACCCTAATCTGCTGTCGAACGAA
GACTATTGGAAAGACCTGCTGGTGTTTTGCAAGGACAACGATGCGATTCG
AGGCTGCTCGTGCCCCGCCTTGGAGGTGGAGGATTTTCAGGGAGGCGAAA
AAAAAATCGTCATCATCAGCACCACCTTGTCGAGGAGGCATCGGGTTGAG
AAGGAGGGCAAGATTGGCTTCCTCGGCGACCCTAAGAAGTTCAACGTCGC
GCTCACCCGCGCACAAGCTCTGGCGGTGGTGGTCGGGAACCCTAATCTGC
TGTCGAACGAAGACTATTGGAAAGACCTGCTGGTGTTTTGCAAGGACAAC
GATGCGATTCGAGGCTGCTCGTGCCCCGCCTTGGAGGTGGAAAGCAGGGA
GGATAGAGCAAGCCTCGTGGAGGCGGTGCTTCAGCAGAGCCTGCTTGGGG
GTGCGGGGTTGGATCTGATGTATCCAGACGACGGCGCTTTTTACGACCAA
GACAATTTGCAATGGCGGGTCATGCTGTAGGTGGAAAGCAGGGAGGATAG
AGCAAGCCTCGTGGAGGCGGTGCTTCAGCAGAGCCTGCTTGGGGGTGCGG
GGTTGGATCTGATGTATCCAGACGACGGCGCTTTTTACGACCAAGACAAT
TTGCAATGGCGGGTCATGCTGTAG
back to top