mRNA_P-canaliculata_contig105153.699.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Match: A0A518EPX9_9BACT (Hydroxyacylglutathione hydrolase n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EPX9_9BACT) HSP 1 Score: 104 bits (259), Expect = 3.610e-24 Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 28 MKRVRISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHDGDDDTDAAHRQCALRELLEEVGFAPAAL 264
M + RI+TAA+VT+G+ V VL VRR+P LRFFGGYWAFPGG VD DHDG+ D D AH++C+ REL EEVG A L
Sbjct: 1 MGKTRIATAALVTRGSGHGVEVLCVRRNPILRFFGGYWAFPGGGVDLADHDGEPDADVAHQRCSFRELFEEVGLLDARL 79
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Match: A0A6L8EJ66_9GAMM (NUDIX hydrolase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EJ66_9GAMM) HSP 1 Score: 81.3 bits (199), Expect = 4.490e-18 Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 37 VRISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHDGDDDT-DAAHRQCALRELLEEVGFAPAALG 267
++ + + I+ +G+ + V +VRR+PEL+FFGGYW FPGG V P DH G+DD + ++CA+RE+LEE A LG
Sbjct: 15 IKSAASVILVRGSDEEPEVYLVRRAPELKFFGGYWVFPGGNVSPVDHHGEDDPGELVLKRCAVREILEETDILSATLG 92
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Match: A0A7K0QLY4_9ACTN (NUDIX domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K0QLY4_9ACTN) HSP 1 Score: 73.6 bits (179), Expect = 5.380e-14 Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 40 RISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHDGDDDTDAAHRQCALRELLEEVGF---APAAL 264
R + I+ +GA+ + +L+VRR+P+ RF GGYW FPGG VD + DGD AHR A+REL EE G APA L
Sbjct: 22 RQAATIILLRGAAAGLEILLVRRTPQARFMGGYWVFPGGAVDAHEGDGDQ----AHRAAAVRELEEEAGISGIAPAQL 95
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Match: UPI00196B4508 (NUDIX domain-containing protein n=1 Tax=Conexibacter sp. SYSU D00693 TaxID=2812560 RepID=UPI00196B4508) HSP 1 Score: 70.9 bits (172), Expect = 5.480e-13 Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 1 PGDSVRVRAMKRVRISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHDGDDDTDAAHRQCALRELLEEVGFAPAALGDPDP 279
PG ++ A R S + I+ +G + + +L+V+R+PE RF GG W FPGG VD + +GD+ AHR CA+REL EE AA+G DP
Sbjct: 9 PGTTLNEGAPVTPRQSASVILLRGGADALELLLVQRTPEARFMGGVWVFPGGAVDAGEGEGDE----AHRVCAVRELEEE-----AAVGGVDP 92
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Match: A0A538LV90_9ACTN (NUDIX hydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538LV90_9ACTN) HSP 1 Score: 70.1 bits (170), Expect = 1.090e-12 Identity = 38/78 (48.72%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 40 RISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHDGDDDTDAAHRQCALRELLEEVGFA---PAAL 264
R + I+ +G + + VL+VRRSP+ RF GG W FPGG VD + +GDD AHR ALREL EE PAAL
Sbjct: 25 RQAATVILLRGGAARLEVLLVRRSPQARFMGGVWVFPGGAVDAGEGEGDD----AHRAAALRELREEAAITLADPAAL 98
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Match: A0A7W1RCZ3_9ACTN (NUDIX hydrolase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W1RCZ3_9ACTN) HSP 1 Score: 68.9 bits (167), Expect = 3.010e-12 Identity = 37/78 (47.44%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 40 RISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHDGDDDTDAAHRQCALRELLEEVGFA---PAAL 264
R + + I+ +G + VL+VRR+P+ RF GG W FPGG VD + DGD+ AHR ALREL EE PAAL
Sbjct: 25 RQAASVILLRGGGGALEVLLVRRTPQARFMGGVWVFPGGAVDAHEGDGDE----AHRTAALRELSEEAAIELDDPAAL 98
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Match: A0A7K0S307_9ACTN (NUDIX domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K0S307_9ACTN) HSP 1 Score: 68.6 bits (166), Expect = 6.700e-12 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 40 RISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHDGDDDTDAAHRQCALRELLEEV---GFAPAAL 264
R + + I+ +G S + +L+V+R+P+ RF GG+W FPGG VD + +GD+ AHR A+REL EE G APA L
Sbjct: 58 RQAASVILLRGGSEALELLLVQRTPDARFMGGFWVFPGGAVDAHEGEGDE----AHRLAAVRELDEEASVGGIAPAEL 131
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Match: A0A538C1I4_9ACTN (NUDIX hydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538C1I4_9ACTN) HSP 1 Score: 67.4 bits (163), Expect = 1.380e-11 Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 40 RISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHDGDDDTDAAHRQCALRELLEEVGF 249
R + I+ +G + VL+VRR+PE RF GG W FPGG VD + +GDD AHR A+REL EE
Sbjct: 31 RQAATVILLRGGDDSLEVLLVRRTPEARFMGGAWVFPGGAVDHAEGEGDD----AHRAAAIRELREEAAI 96
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Match: A0A7C8D0P4_9BACT (MBL fold metallo-hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8D0P4_9BACT) HSP 1 Score: 68.2 bits (165), Expect = 2.390e-11 Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = 1
Query: 28 MKRVRISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHDGDDDTDAA-HRQCALRELLEEVGFAPAAL 264
+ ++R S+A ++T+G ++ V +V R+PELRFFGG+WA PGGVV+ D G+ + + ALREL EE G +L
Sbjct: 3 LPKMRHSSAVLLTRGEGVELEVFLVERAPELRFFGGFWALPGGVVEGLDRRGETEIKLEISARSALRELFEETGILAGSL 82
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Match: A0A7C1X9P9_9BACT (MBL fold metallo-hydrolase (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C1X9P9_9BACT) HSP 1 Score: 67.4 bits (163), Expect = 3.620e-11 Identity = 35/77 (45.45%), Postives = 44/77 (57.14%), Query Frame = 1
Query: 34 RVRISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHDGDD-----DTDAAHRQCALRELLEEVGF 249
R R + A ++T+G R+ V + R+PELRFFGGYWA PGG + ED D D A + CA REL EE G
Sbjct: 2 RRRTAAALMITRGHGRERTVFLAERAPELRFFGGYWAMPGGTIGDEDLHPDGGGNPVDEATALQHCAHRELFEETGL 78 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig105153.699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig105153.699.1 >prot_P-canaliculata_contig105153.699.1 ID=prot_P-canaliculata_contig105153.699.1|Name=mRNA_P-canaliculata_contig105153.699.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=84bp MKRVRISTAAIVTKGASRDVRVLVVRRSPELRFFGGYWAFPGGVVDPEDHback to top mRNA from alignment at P-canaliculata_contig105153:5..283- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig105153.699.1 ID=mRNA_P-canaliculata_contig105153.699.1|Name=mRNA_P-canaliculata_contig105153.699.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=279bp|location=Sequence derived from alignment at P-canaliculata_contig105153:5..283- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig105153:5..283- >mRNA_P-canaliculata_contig105153.699.1 ID=mRNA_P-canaliculata_contig105153.699.1|Name=mRNA_P-canaliculata_contig105153.699.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=504bp|location=Sequence derived from alignment at P-canaliculata_contig105153:5..283- (Pelvetia canaliculata dioecious)back to top |