mRNA_P-canaliculata_contig104765.659.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig104765.659.1
Unique NamemRNA_P-canaliculata_contig104765.659.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Match: UPI0003FE187A (organoarsenical effux MFS transporter ArsJ n=1 Tax=Psychromonas sp. SP041 TaxID=1365007 RepID=UPI0003FE187A)

HSP 1 Score: 536 bits (1381), Expect = 1.640e-189
Identity = 271/312 (86.86%), Postives = 291/312 (93.27%), Query Frame = 1
Query:    1 VPSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVSVLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLENDLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFSKEGEAPGGKSAMLWCVLLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTSLISLKLPDAESE 936
            VPSEWLTIPWVMMAQA+SGIAKDLNKMSAKSAIKTLIP+NQQGKLYHWV+VLTGSKNALKGAGFFIGGLLLTLVGFQ++LLIMA VL AVFI SL+ LE DLG AKTKPKFSQ+FSKS PVNILSAARLFLFASRDVWFVVALPIYL SIF WSHS VGAFLAAWVIAYG+VQGFAPKITA+FSKEG  P GKSAM WC+LLAV+TG+LA  IEL WQVQWMITIGLLIFGA FA+NSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRL+GTVLSGW+YQ YGF+ACLWIAFAFLV+TS+ISLKLP  +S+
Sbjct:   96 VPSEWLTIPWVMMAQALSGIAKDLNKMSAKSAIKTLIPHNQQGKLYHWVAVLTGSKNALKGAGFFIGGLLLTLVGFQIALLIMAVVLAAVFILSLMFLEGDLGIAKTKPKFSQMFSKSGPVNILSAARLFLFASRDVWFVVALPIYLVSIFGWSHSIVGAFLAAWVIAYGIVQGFAPKITAYFSKEGTTPDGKSAMFWCLLLAVVTGVLAIGIELEWQVQWMITIGLLIFGAIFAVNSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLVGTVLSGWVYQAYGFAACLWIAFAFLVITSVISLKLPVQKSD 407          
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Match: A0A7W4A393_9GAMM (Organoarsenical effux MFS transporter ArsJ n=5 Tax=Psychromonas TaxID=67572 RepID=A0A7W4A393_9GAMM)

HSP 1 Score: 528 bits (1360), Expect = 2.480e-186
Identity = 270/314 (85.99%), Postives = 289/314 (92.04%), Query Frame = 1
Query:    1 VPSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVSVLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLENDLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFSKEGE-----APGGKSAMLWCVLLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTSLISLKLPDA 927
            VPSEWLTIPWVMMAQA SGIAKDLNKMSAKS+IKTLIPNNQQ KLYHWV+VLTGSKNALKGAGFFIGGLL TLVGFQV+L+IMAGVL  VF+ SLL LE DLGKAKTKPKFSQ+FSKS PVNILSAARLFLFASRDVWFVVALPIYLASIF WSHS VGAFLA+WVIAYG+VQGFAPKITA+FSK G      AP GKSAMLWC LLAV+TGILA +I L WQVQW+ITIGLLIFGA FAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRL+GTVLSGWIYQ YGF+ACLWIAFAFL++TS+ISLKLP++
Sbjct:   96 VPSEWLTIPWVMMAQAFSGIAKDLNKMSAKSSIKTLIPNNQQSKLYHWVAVLTGSKNALKGAGFFIGGLLSTLVGFQVALMIMAGVLAMVFVMSLLFLEGDLGKAKTKPKFSQMFSKSGPVNILSAARLFLFASRDVWFVVALPIYLASIFGWSHSVVGAFLASWVIAYGIVQGFAPKITAYFSKNGATENGTAPNGKSAMLWCSLLAVVTGILALAIHLEWQVQWIITIGLLIFGAIFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLVGTVLSGWIYQAYGFAACLWIAFAFLLITSVISLKLPES 409          
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Match: A0A4Y7ZQR5_9GAMM (Organoarsenical effux MFS transporter ArsJ n=1 Tax=Psychromonas sp. RZ22 TaxID=2555643 RepID=A0A4Y7ZQR5_9GAMM)

HSP 1 Score: 488 bits (1255), Expect = 2.400e-170
Identity = 245/312 (78.53%), Postives = 278/312 (89.10%), Query Frame = 1
Query:    1 VPSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVSVLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLENDLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFSKEGEAPGGKSAMLWCVLLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTSLISLKLPDAESE 936
            VPS+WL+I WVMMAQA+SGIAKDLNKMSAKSAIKTLIP +QQGKLYHWV+VLTGSKNALKGAGFF+GG LL+ +GFQ +LL MA VL  VF+ S++ LE DLGKAK+KPKFSQIFS S PVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHS VGAF+A WVI YG+VQGFAP+ITA+FS  G  P GKSA+LWC LLA +TGILA  ++L WQVQW+I +GLLIFGA FAINSSLHSYLIISYAK+DGVSLDVGFYYMANAMGRL+GTVLSGW+YQ  GF+ACLWIAF FL++TS+ISLKLP  +++
Sbjct:   96 VPSDWLSIAWVMMAQALSGIAKDLNKMSAKSAIKTLIPGDQQGKLYHWVAVLTGSKNALKGAGFFLGGFLLSTLGFQFALLTMAMVLSLVFVASIVFLEKDLGKAKSKPKFSQIFSSSGPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSVVGAFIATWVILYGIVQGFAPRITAYFS-AGAIPNGKSALLWCCLLASVTGILALGVQLGWQVQWVIGVGLLIFGAIFAINSSLHSYLIISYAKEDGVSLDVGFYYMANAMGRLVGTVLSGWVYQEAGFAACLWIAFGFLLLTSIISLKLPVQKAD 406          
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Match: A0A4Y7ZNW8_9GAMM (Organoarsenical effux MFS transporter ArsJ n=1 Tax=Psychromonas sp. RZ5 TaxID=2555642 RepID=A0A4Y7ZNW8_9GAMM)

HSP 1 Score: 481 bits (1239), Expect = 6.040e-168
Identity = 240/315 (76.19%), Postives = 277/315 (87.94%), Query Frame = 1
Query:    1 VPSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVSVLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLENDLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFS----KEGEAPGGKSAMLWCVLLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTSLISLKLPDAES 933
            VPS+WL++ WVM AQA+SGIAKDLNKMSAKSAIKTLIPN+QQGKLY WV++LTGSKNALKGAGFF+GGLLLT VGFQ++L++MA VL  VF+ S+  LE DLGKAKTKPKFSQ+FSKS  VNILSAARLFLFASRDVWFVVALPIYLASIF W H+ VG+F+A WVI YG+VQG APKIT +FS    ++  AP GKSA+LWC LL ++TGILA  +EL WQ QW+I IGLL+FGA FAINSSLHSYLIISYAK+DGVSLDVGFYYMANAMGRL+GT+LSGW+YQVYGF+ACLWIAF FL++TS+ISLKLP  +S
Sbjct:   96 VPSDWLSVAWVMAAQALSGIAKDLNKMSAKSAIKTLIPNDQQGKLYQWVAILTGSKNALKGAGFFLGGLLLTTVGFQMALVVMASVLALVFVLSIAYLEKDLGKAKTKPKFSQMFSKSESVNILSAARLFLFASRDVWFVVALPIYLASIFGWEHAVVGSFIAVWVILYGIVQGIAPKITHYFSAAHSEQRHAPNGKSAVLWCCLLTLVTGILAFGVELQWQAQWVIGIGLLVFGAIFAINSSLHSYLIISYAKEDGVSLDVGFYYMANAMGRLVGTLLSGWVYQVYGFAACLWIAFGFLLLTSIISLKLPMQKS 410          
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Match: E3BQ13_9VIBR (Permease n=11 Tax=Vibrionaceae TaxID=641 RepID=E3BQ13_9VIBR)

HSP 1 Score: 452 bits (1164), Expect = 1.560e-156
Identity = 219/315 (69.52%), Postives = 268/315 (85.08%), Query Frame = 1
Query:    1 VPSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVSVLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLENDLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFSKEGEAPGGKSAMLWCVLLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTSLISLKLPDAESEKIS 945
            VP+ WL+IPWVM AQA+SGIAKDLNKMSAKS+IK L+P N QG LY W+++LTGSKNALKGAGFF+GG LL+L+GFQ ++ +MA VL  VFI S+++L++DLGKAK KPKFS+IFSKS  VNILSAAR+FLF +RDVWFV+ALPIYL S+F WSHSAVGAFLA WVI YG++QG APKIT    K G AP GK A +W ++L+++TG++A S++L W  +W+I +GLLIFGA FAINSSLHSYLI+SYAK DGVSLDVGFYYMANAMGRLIGTVLSGW++QV+GFSACLW++FAFLV TS+ISL LP    + ++
Sbjct:   94 VPASWLSIPWVMAAQALSGIAKDLNKMSAKSSIKALVPENAQGALYKWIAILTGSKNALKGAGFFLGGALLSLIGFQYAVAVMASVLLVVFIGSVISLKSDLGKAKNKPKFSEIFSKSTSVNILSAARMFLFGARDVWFVIALPIYLGSVFSWSHSAVGAFLAIWVIGYGIIQGLAPKITV--RKSGHAPDGKVATIWALMLSLVTGLIAYSVQLQWHPEWVIVVGLLIFGAVFAINSSLHSYLIVSYAKGDGVSLDVGFYYMANAMGRLIGTVLSGWVFQVWGFSACLWVSFAFLVSTSIISLWLPKVTPQSLA 406          
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Match: A0A2N7DH31_9VIBR (MFS transporter permease n=1 Tax=Vibrio sp. 10N.286.49.B3 TaxID=1880855 RepID=A0A2N7DH31_9VIBR)

HSP 1 Score: 449 bits (1155), Expect = 2.670e-155
Identity = 219/311 (70.42%), Postives = 262/311 (84.24%), Query Frame = 1
Query:    4 PSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVSVLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLENDLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFSKEGEAPGGKSAMLWCVLLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTSLISLKLPDAESE 936
            P  WLTIPWVM AQA+SGIAKDLNKMSAKSAIKTL+P+ QQG LY W+++LTGSKNALKGAGFF+GGLLLTL+GFQ S+L+MA VL  V I SL  L+ND+GKAK+KPKFSQIFSKS P+NILSAARLFLF +RDVWFVVALPIYL S+F W H  VG+FLA W++AYGVVQGFAPKIT     +G  P G +A +W  LL ++TG +A  +++ W  QW+I IGL+IFGA FA+NSSLHSYLI+SYAK DGVS+DVGFYYMANAMGRLIGT+LSGW++QV G +ACLW++FAFL++T+LISLKLP   +E
Sbjct:   95 PGAWLTIPWVMAAQALSGIAKDLNKMSAKSAIKTLVPDEQQGALYQWIAILTGSKNALKGAGFFLGGLLLTLIGFQYSVLLMAAVLSLVLIGSLTWLDNDMGKAKSKPKFSQIFSKSGPINILSAARLFLFGARDVWFVVALPIYLGSVFGWDHIWVGSFLACWIVAYGVVQGFAPKITG--KAQGRLPDGHAAFVWSALLTLVTGGIAYGVQIEWHPQWLIVIGLMIFGAVFAVNSSLHSYLIVSYAKGDGVSMDVGFYYMANAMGRLIGTILSGWVFQVAGLAACLWVSFAFLLLTTLISLKLPKLTAE 403          
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Match: A0A1E5CMJ9_9VIBR (MFS transporter permease n=4 Tax=Vibrionales TaxID=135623 RepID=A0A1E5CMJ9_9VIBR)

HSP 1 Score: 449 bits (1154), Expect = 4.350e-155
Identity = 220/313 (70.29%), Postives = 266/313 (84.98%), Query Frame = 1
Query:    1 VPSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVSVLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLENDLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFSKEGEAPGGKSAMLWCVLLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTSLISLKLPDAESEK 939
            VPS WLTIPWVM AQA+SGIAKDLNKMSAKSAIKTL+P+NQQG LY W+++LTGSKNALKGAGFF+GGLLL+++GFQ S+L+MA VL  V I SL  LE+D+GKAK KPKF+QIFSKS P+NILSAAR+FLF +RDVWFVVALP+YL S+F W H  VG FLA WVIAYGVVQGFAPKIT     +G  P G +A+ W  LLA+ITG++A ++++ WQ Q +I +GL+IFGA FA+NSSLHSYLI+SYAK DGVS+DVGFYYMANAMGRLIGT+LSGW++QV G +ACLW++FAFL+VT+LISLKLP    ++
Sbjct:   94 VPSGWLTIPWVMAAQALSGIAKDLNKMSAKSAIKTLVPDNQQGALYKWIAILTGSKNALKGAGFFLGGLLLSMIGFQASVLLMASVLAVVLIGSLSWLESDMGKAKNKPKFTQIFSKSEPINILSAARMFLFGARDVWFVVALPVYLGSVFGWDHLWVGGFLATWVIAYGVVQGFAPKITG--KAQGRVPDGHAALRWAGLLAIITGLIAYAVQIGWQPQLVIVLGLMIFGAVFAVNSSLHSYLIVSYAKGDGVSMDVGFYYMANAMGRLIGTILSGWVFQVAGLAACLWVSFAFLLVTTLISLKLPTLSKDR 404          
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Match: A0A6N3Z4V4_ALIFS (Organoarsenical effux MFS transporter ArsJ n=27 Tax=Vibrionaceae TaxID=641 RepID=A0A6N3Z4V4_ALIFS)

HSP 1 Score: 447 bits (1150), Expect = 1.430e-154
Identity = 216/308 (70.13%), Postives = 265/308 (86.04%), Query Frame = 1
Query:    4 PSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVSVLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLENDLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFSKEGEAPGGKSAMLWCVLLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTSLISLKLPDA 927
            PS WLTIPWVM AQA SGIAKDLNKMSAKSAIKTL+P++Q+G LY WV++LTGSKNALKGAGFF+GGLLLT +GFQ +++ MA VLF VF+ S+L L+ D+GKAK+KPKF+Q+FSKS  +N LSAARLFLF +RDVWFVVALPIYL S+F+W HS VG FLA WVIAYG VQGFAPKIT     EG+AP G++AM W  LLA++TGI+A S+++ WQ +++I IGLLIFG  FA+NSSLHSYLI+SYAK DGVS+DVGFYYMANAMGRL+GT+LSGW++QV GF+ACLW++F FL++ +LIS+KLP +
Sbjct:   95 PSSWLTIPWVMAAQAFSGIAKDLNKMSAKSAIKTLVPSDQEGALYKWVAILTGSKNALKGAGFFLGGLLLTTIGFQFAVIAMASVLFVVFVGSVLLLDGDMGKAKSKPKFTQLFSKSEQINTLSAARLFLFGARDVWFVVALPIYLGSVFNWDHSLVGGFLALWVIAYGFVQGFAPKITG--KAEGKAPDGRAAMWWVSLLALVTGIIAYSVQIEWQPEYVIVIGLLIFGGIFAVNSSLHSYLIVSYAKGDGVSMDVGFYYMANAMGRLVGTILSGWVFQVAGFAACLWVSFGFLLLAALISIKLPKS 400          
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Match: U4KAD3_9VIBR (Putative Major facilitator superfamily, general substrate transporter n=11 Tax=Vibrionaceae TaxID=641 RepID=U4KAD3_9VIBR)

HSP 1 Score: 446 bits (1147), Expect = 4.700e-154
Identity = 220/307 (71.66%), Postives = 262/307 (85.34%), Query Frame = 1
Query:    1 VPSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVSVLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLENDLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFSKEGEAPGGKSAMLWCVLLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTSLISLKLP 921
            VP+ WLTIPWVM AQA+SGIAKDLNKMSAKSAIKTL+P+  QG LY W+++LTGSKNALKGAGFFIGGLLL+LVGF+ ++LIMA VLF V I SL+ LE+++GKAK KPKFSQIFSKS  +NILSAAR+FLF +RDVWFVVALPIYL S+F W H  VG FLA+WVIAYG VQG APKIT     +G  P G +A+ W +LLAVITG++A S+++ W  QW+I IGL+IFGA FA+NSSLHSYLI+SYAK DGVSLDVGFYYMANAMGRLIGTVLSGW++QV G +ACLW++F FLV+T++IS+KLP
Sbjct:   94 VPAGWLTIPWVMAAQALSGIAKDLNKMSAKSAIKTLVPDENQGALYKWIAILTGSKNALKGAGFFIGGLLLSLVGFKSAVLIMAAVLFCVLIGSLIALESNMGKAKNKPKFSQIFSKSESINILSAARMFLFGARDVWFVVALPIYLGSVFGWDHLWVGGFLASWVIAYGFVQGLAPKITG--KAQGRVPDGSAALYWALLLAVITGVIAYSVQMEWHPQWVIVIGLMIFGAVFAVNSSLHSYLIVSYAKGDGVSLDVGFYYMANAMGRLIGTVLSGWVFQVAGLAACLWVSFGFLVLTAIISIKLP 398          
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Match: UPI0012D9A2EA (organoarsenical effux MFS transporter ArsJ n=3 Tax=Aliivibrio fischeri TaxID=668 RepID=UPI0012D9A2EA)

HSP 1 Score: 443 bits (1140), Expect = 4.740e-153
Identity = 214/308 (69.48%), Postives = 262/308 (85.06%), Query Frame = 1
Query:    4 PSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVSVLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLENDLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASIFDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFSKEGEAPGGKSAMLWCVLLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAKQDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTSLISLKLPDA 927
            PS WLTIPWVM AQA SGIAKDLNKMSAKSAIKTL+P+ Q+G LY WV++LTGSKNALKGAGFF+GGLLLT +GFQ +++ MA VLF VF+ S+L L+ D+GKA +KPKF+Q+FSKS  +N LSAARLFLF +RDVWFVVALPIYL S+F+W HS+VG FLA WVIAYG VQGFAPKIT     EG+ P G++AM W  LLA++TGI+A S+++ WQ +++I IGLLIFG  FA+NSSLHSYLI+SYAK DGVS+DVGFYYMANAMGRL+GT+LSGW++QV GF+ACLW++F FL+  +LIS+KLP +
Sbjct:   95 PSSWLTIPWVMAAQAFSGIAKDLNKMSAKSAIKTLVPSEQEGALYKWVAILTGSKNALKGAGFFLGGLLLTTIGFQFAVIAMASVLFVVFVGSVLLLDGDMGKANSKPKFTQLFSKSEQINTLSAARLFLFGARDVWFVVALPIYLGSVFNWDHSSVGGFLALWVIAYGFVQGFAPKITG--KAEGKVPDGRAAMWWVSLLALVTGIIAYSVQIEWQPEYVIVIGLLIFGGIFAVNSSLHSYLIVSYAKGDGVSMDVGFYYMANAMGRLVGTILSGWVFQVAGFAACLWVSFGFLLFAALISIKLPKS 400          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig104765.659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0003FE187A1.640e-18986.86organoarsenical effux MFS transporter ArsJ n=1 Tax... [more]
A0A7W4A393_9GAMM2.480e-18685.99Organoarsenical effux MFS transporter ArsJ n=5 Tax... [more]
A0A4Y7ZQR5_9GAMM2.400e-17078.53Organoarsenical effux MFS transporter ArsJ n=1 Tax... [more]
A0A4Y7ZNW8_9GAMM6.040e-16876.19Organoarsenical effux MFS transporter ArsJ n=1 Tax... [more]
E3BQ13_9VIBR1.560e-15669.52Permease n=11 Tax=Vibrionaceae TaxID=641 RepID=E3B... [more]
A0A2N7DH31_9VIBR2.670e-15570.42MFS transporter permease n=1 Tax=Vibrio sp. 10N.28... [more]
A0A1E5CMJ9_9VIBR4.350e-15570.29MFS transporter permease n=4 Tax=Vibrionales TaxID... [more]
A0A6N3Z4V4_ALIFS1.430e-15470.13Organoarsenical effux MFS transporter ArsJ n=27 Ta... [more]
U4KAD3_9VIBR4.700e-15471.66Putative Major facilitator superfamily, general su... [more]
UPI0012D9A2EA4.740e-15369.48organoarsenical effux MFS transporter ArsJ n=3 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig104765contigP-canaliculata_contig104765:11..958 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score451.8
Seed ortholog evalue2.6e-124
Seed eggNOG ortholog796620.VIBC2010_16759
EggNOG free text desc.Major facilitator Superfamily
EggNOG OGs1MV8D@1224,1RNF0@1236,1XTRW@135623,COG0477@1,COG2814@2
COG Functional cat.EGP
Best tax levelVibrionales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionMajor facilitator superfamily domain
Ec32 orthologEc-12_000960.1
Exons1
Model size948
Cds size948
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815618.6862872-CDS-P-canaliculata_contig104765:10..9581622815618.6862872-CDS-P-canaliculata_contig104765:10..958Pelvetia canaliculata dioeciousCDSP-canaliculata_contig104765 11..958 -
1693494169.2130864-CDS-P-canaliculata_contig104765:10..9581693494169.2130864-CDS-P-canaliculata_contig104765:10..958Pelvetia canaliculata dioeciousCDSP-canaliculata_contig104765 11..958 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig104765.659.1prot_P-canaliculata_contig104765.659.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig104765 11..958 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig104765.659.1

>prot_P-canaliculata_contig104765.659.1 ID=prot_P-canaliculata_contig104765.659.1|Name=mRNA_P-canaliculata_contig104765.659.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=316bp
VPSEWLTIPWVMMAQAISGIAKDLNKMSAKSAIKTLIPNNQQGKLYHWVS
VLTGSKNALKGAGFFIGGLLLTLVGFQVSLLIMAGVLFAVFITSLLTLEN
DLGKAKTKPKFSQIFSKSAPVNILSAARLFLFASRDVWFVVALPIYLASI
FDWSHSAVGAFLAAWVIAYGVVQGFAPKITAFFSKEGEAPGGKSAMLWCV
LLAVITGILATSIELTWQVQWMITIGLLIFGAFFAINSSLHSYLIISYAK
QDGVSLDVGFYYMANAMGRLIGTVLSGWIYQVYGFSACLWIAFAFLVVTS
LISLKLPDAESEKIS*
back to top

mRNA from alignment at P-canaliculata_contig104765:11..958-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig104765.659.1 ID=mRNA_P-canaliculata_contig104765.659.1|Name=mRNA_P-canaliculata_contig104765.659.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=948bp|location=Sequence derived from alignment at P-canaliculata_contig104765:11..958- (Pelvetia canaliculata dioecious)
GTACCTAGTGAATGGTTAACGATACCTTGGGTGATGATGGCTCAAGCAAT ATCAGGTATTGCAAAAGATTTAAACAAAATGAGTGCTAAAAGCGCTATTA AAACATTGATTCCAAACAATCAGCAAGGCAAATTATATCATTGGGTTTCA GTATTAACGGGTTCTAAAAATGCGCTTAAAGGCGCTGGTTTTTTCATCGG CGGTTTATTATTAACTTTAGTAGGTTTTCAGGTATCGTTACTGATCATGG CGGGGGTATTATTTGCCGTTTTCATTACAAGTCTACTCACTTTAGAAAAT GACTTAGGAAAAGCAAAAACAAAACCTAAATTCAGCCAGATATTTTCTAA ATCGGCTCCAGTGAATATTCTTTCTGCTGCACGTTTATTTTTATTTGCAT CACGTGATGTGTGGTTTGTTGTTGCATTGCCTATCTATTTAGCAAGTATT TTTGACTGGTCACATTCTGCGGTTGGTGCCTTTTTAGCTGCTTGGGTTAT TGCTTATGGTGTCGTGCAAGGTTTTGCACCTAAAATTACTGCTTTTTTTT CCAAAGAAGGGGAAGCACCCGGTGGTAAAAGTGCCATGTTATGGTGTGTT TTATTGGCAGTGATTACTGGTATTTTAGCGACGAGTATAGAGCTTACTTG GCAAGTGCAGTGGATGATTACTATTGGATTGCTAATCTTTGGTGCTTTTT TTGCCATTAACTCTTCTTTGCATTCATATCTCATTATCAGTTATGCAAAA CAAGATGGGGTGTCATTAGATGTTGGGTTTTATTATATGGCGAATGCAAT GGGACGTTTAATTGGCACAGTTTTATCTGGTTGGATCTATCAGGTTTATG GTTTTTCAGCGTGTTTATGGATTGCTTTTGCTTTTTTAGTGGTGACAAGT TTAATTTCATTAAAACTGCCTGACGCTGAAAGTGAAAAAATCAGCTGA
back to top

Coding sequence (CDS) from alignment at P-canaliculata_contig104765:11..958-

>mRNA_P-canaliculata_contig104765.659.1 ID=mRNA_P-canaliculata_contig104765.659.1|Name=mRNA_P-canaliculata_contig104765.659.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1896bp|location=Sequence derived from alignment at P-canaliculata_contig104765:11..958- (Pelvetia canaliculata dioecious)
GTACCTAGTGAATGGTTAACGATACCTTGGGTGATGATGGCTCAAGCAAT
ATCAGGTATTGCAAAAGATTTAAACAAAATGAGTGCTAAAAGCGCTATTA
AAACATTGATTCCAAACAATCAGCAAGGCAAATTATATCATTGGGTTTCA
GTATTAACGGGTTCTAAAAATGCGCTTAAAGGCGCTGGTTTTTTCATCGG
CGGTTTATTATTAACTTTAGTAGGTTTTCAGGTATCGTTACTGATCATGG
CGGGGGTATTATTTGCCGTTTTCATTACAAGTCTACTCACTTTAGAAAAT
GACTTAGGAAAAGCAAAAACAAAACCTAAATTCAGCCAGATATTTTCTAA
ATCGGCTCCAGTGAATATTCTTTCTGCTGCACGTTTATTTTTATTTGCAT
CACGTGATGTGTGGTTTGTTGTTGCATTGCCTATCTATTTAGCAAGTATT
TTTGACTGGTCACATTCTGCGGTTGGTGCCTTTTTAGCTGCTTGGGTTAT
TGCTTATGGTGTCGTGCAAGGTTTTGCACCTAAAATTACTGCTTTTTTTT
CCAAAGAAGGGGAAGCACCCGGTGGTAAAAGTGCCATGTTATGGTGTGTT
TTATTGGCAGTGATTACTGGTATTTTAGCGACGAGTATAGAGCTTACTTG
GCAAGTGCAGTGGATGATTACTATTGGATTGCTAATCTTTGGTGCTTTTT
TTGCCATTAACTCTTCTTTGCATTCATATCTCATTATCAGTTATGCAAAA
CAAGATGGGGTGTCATTAGATGTTGGGTTTTATTATATGGCGAATGCAAT
GGGACGTTTAATTGGCACAGTTTTATCTGGTTGGATCTATCAGGTTTATG
GTTTTTCAGCGTGTTTATGGATTGCTTTTGCTTTTTTAGTGGTGACAAGT
TTAATTTCATTAAAACTGCCTGACGCTGAAAGTGAAAAAATCAGCTGAGT
ACCTAGTGAATGGTTAACGATACCTTGGGTGATGATGGCTCAAGCAATAT
CAGGTATTGCAAAAGATTTAAACAAAATGAGTGCTAAAAGCGCTATTAAA
ACATTGATTCCAAACAATCAGCAAGGCAAATTATATCATTGGGTTTCAGT
ATTAACGGGTTCTAAAAATGCGCTTAAAGGCGCTGGTTTTTTCATCGGCG
GTTTATTATTAACTTTAGTAGGTTTTCAGGTATCGTTACTGATCATGGCG
GGGGTATTATTTGCCGTTTTCATTACAAGTCTACTCACTTTAGAAAATGA
CTTAGGAAAAGCAAAAACAAAACCTAAATTCAGCCAGATATTTTCTAAAT
CGGCTCCAGTGAATATTCTTTCTGCTGCACGTTTATTTTTATTTGCATCA
CGTGATGTGTGGTTTGTTGTTGCATTGCCTATCTATTTAGCAAGTATTTT
TGACTGGTCACATTCTGCGGTTGGTGCCTTTTTAGCTGCTTGGGTTATTG
CTTATGGTGTCGTGCAAGGTTTTGCACCTAAAATTACTGCTTTTTTTTCC
AAAGAAGGGGAAGCACCCGGTGGTAAAAGTGCCATGTTATGGTGTGTTTT
ATTGGCAGTGATTACTGGTATTTTAGCGACGAGTATAGAGCTTACTTGGC
AAGTGCAGTGGATGATTACTATTGGATTGCTAATCTTTGGTGCTTTTTTT
GCCATTAACTCTTCTTTGCATTCATATCTCATTATCAGTTATGCAAAACA
AGATGGGGTGTCATTAGATGTTGGGTTTTATTATATGGCGAATGCAATGG
GACGTTTAATTGGCACAGTTTTATCTGGTTGGATCTATCAGGTTTATGGT
TTTTCAGCGTGTTTATGGATTGCTTTTGCTTTTTTAGTGGTGACAAGTTT
AATTTCATTAAAACTGCCTGACGCTGAAAGTGAAAAAATCAGCTGA
back to top