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Homology
BLAST of mRNA_P-canaliculata_contig1047.646.1 vs. uniprot
Match: D7G2K9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2K9_ECTSI) HSP 1 Score: 166 bits (421), Expect = 3.480e-43 Identity = 173/287 (60.28%), Postives = 202/287 (70.38%), Query Frame = 1
Query: 1 MGRVRRYKKVKAIDPFAKGGDSKK---GRKN-HDLDRNLPPDIKNHQAPRMKARQGTNGGKRKTKRRLPQWAQDELKETAKREREERSDPLVDNQQPQ-SKASIEGKREDESMREFHSRVQDRKTQLLKESFQEHSATRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRSTGSSG---------------GVIGARSRKAKRTDGGDEDTAVLGVERIRFGEVVHAPPNLAKIPKPKGLKEQGKTKPWVRGSTGA 801
MGRVR+YKKVKA+DPFAKGG + GRK DLDRNLPPD+KNHQA R+ + K+K KRRLPQWA +ELKETAKR REE +DP +QP+ +A++EGKREDESMR+F+ RV++ QLLK+ F+EHS+T XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GV+G R D + +L ERIRFGEV HAPP+LAKIPKP+G K+QG+ KPW R + A
Sbjct: 1 MGRVRKYKKVKAMDPFAKGGCGGRMGMGRKGGSDLDRNLPPDVKNHQAQRLNNLEEGKDKKKKNKRRLPQWAHEELKETAKRVREEHADPGGKGRQPEPQRAAMEGKREDESMRQFNKRVREGTAQLLKDEFKEHSSTNKXXXXXXXXXXXXXXXXXXXLWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVLG-------RADDDEGAAQLLQKERIRFGEVAHAPPDLAKIPKPRGFKDQGQAKPWARQAAAA 280
BLAST of mRNA_P-canaliculata_contig1047.646.1 vs. uniprot
Match: A0A835YUV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV8_9STRA) HSP 1 Score: 103 bits (258), Expect = 4.950e-21 Identity = 114/362 (31.49%), Postives = 156/362 (43.09%), Query Frame = 1
Query: 1 MGRVRRYKKVKAIDPFAKGGDSKKGRKNHDLDRNLPPDIKNHQAPRMKARQGTNGGKRKTKRRLPQWAQDELKETAKREREERSDPLV---------DNQQPQSKASIEGKREDESMREFHSRVQDRKTQLLKESFQEHSATRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRSTGSSGGVIGARSRKAKRTDGGDEDTAVLGVERIRFGEVVHAPPNLAKIPKPKGLKEQGKTKPWVRGSTGALPDETSRRDQLNGSRKHQFNKRDARETGNMDELPDVLRQRQEGMQDYDKAQ--SRQMEEMRQRVQEAYTGLKKRRRAGQTQYIGND 1053
MGRVRRYKK K +D +K +K D++ NLPPD NHQA R+KA GT KR+ K+RLP+WA++EL+ETAKRERE L +N P K I KR DES+REF+ RV+ + LK++ + S+T +K+ G + + A+ G E+ E I+FGE VH PP +PK KGLK KPW+RG R D + G + R+ G G+ + AQ ++Q+E +R AY LKKRRRAGQ Q++ +D
Sbjct: 1 MGRVRRYKKAKNLDITSK----RKRADKKDVEHNLPPDTANHQAQRLKA-DGTL--KRRAKQRLPEWAKEELRETAKREREADKQLLAGAAATPLPGENDTP--KVKITPKRTDESLREFNERVRKVAAEALKDNAKRASST------------------------------------------------VARRKKHLAEKSQKKKLQRQGLWEEHKMQVAREEQGIAEERDFSKPEHIQFGETVHEPPRFQSMPKLKGLKPDLAEKPWLRGL---------RSDAITGLK---------RKAGGXXXXXXXXX----GVLSAEGAQLKAQQLERVRTEAVAAYADLKKRRRAGQVQHVAHD 283
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-11_002610.1 |
| Exons | 5 |
| Model size | 1779 |
| Cds size | 1059 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815617.590429-CDS-P-canaliculata_contig1047:8171..8331 | 1622815617.590429-CDS-P-canaliculata_contig1047:8171..8331 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1047 8172..8331 + |
| 1693494168.5579588-CDS-P-canaliculata_contig1047:8171..8331 | 1693494168.5579588-CDS-P-canaliculata_contig1047:8171..8331 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1047 8172..8331 + |
| 1622815617.6023798-CDS-P-canaliculata_contig1047:19930..20064 | 1622815617.6023798-CDS-P-canaliculata_contig1047:19930..20064 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1047 19931..20064 + |
| 1693494168.573221-CDS-P-canaliculata_contig1047:19930..20064 | 1693494168.573221-CDS-P-canaliculata_contig1047:19930..20064 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1047 19931..20064 + |
| 1622815617.6143408-CDS-P-canaliculata_contig1047:20329..20451 | 1622815617.6143408-CDS-P-canaliculata_contig1047:20329..20451 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1047 20330..20451 + |
| 1693494168.5833158-CDS-P-canaliculata_contig1047:20329..20451 | 1693494168.5833158-CDS-P-canaliculata_contig1047:20329..20451 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1047 20330..20451 + |
| 1622815617.6245508-CDS-P-canaliculata_contig1047:20831..21107 | 1622815617.6245508-CDS-P-canaliculata_contig1047:20831..21107 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1047 20832..21107 + |
| 1693494168.592774-CDS-P-canaliculata_contig1047:20831..21107 | 1693494168.592774-CDS-P-canaliculata_contig1047:20831..21107 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1047 20832..21107 + |
| 1622815617.6359127-CDS-P-canaliculata_contig1047:21489..21856 | 1622815617.6359127-CDS-P-canaliculata_contig1047:21489..21856 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1047 21490..21856 + |
| 1693494168.6085596-CDS-P-canaliculata_contig1047:21489..21856 | 1693494168.6085596-CDS-P-canaliculata_contig1047:21489..21856 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig1047 21490..21856 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815617.653649-UTR-P-canaliculata_contig1047:21856..22576 | 1622815617.653649-UTR-P-canaliculata_contig1047:21856..22576 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig1047 21857..22576 + |
| 1693494168.6180584-UTR-P-canaliculata_contig1047:21856..22576 | 1693494168.6180584-UTR-P-canaliculata_contig1047:21856..22576 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig1047 21857..22576 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig1047.646.1 >prot_P-canaliculata_contig1047.646.1 ID=prot_P-canaliculata_contig1047.646.1|Name=mRNA_P-canaliculata_contig1047.646.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=353bp
MGRVRRYKKVKAIDPFAKGGDSKKGRKNHDLDRNLPPDIKNHQAPRMKAR
QGTNGGKRKTKRRLPQWAQDELKETAKREREERSDPLVDNQQPQSKASIE
GKREDESMREFHSRVQDRKTQLLKESFQEHSATRNKKKRYMDEKKRKKKL
QKRGLWEEARRRELLDQEHDAEDDRRDGSSTGPGRKPPTTAGDRKRSTGS
SGGVIGARSRKAKRTDGGDEDTAVLGVERIRFGEVVHAPPNLAKIPKPKG
LKEQGKTKPWVRGSTGALPDETSRRDQLNGSRKHQFNKRDARETGNMDEL
PDVLRQRQEGMQDYDKAQSRQMEEMRQRVQEAYTGLKKRRRAGQTQYIGN
DL* back to topmRNA from alignment at P-canaliculata_contig1047:8172..22576+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig1047.646.1 ID=mRNA_P-canaliculata_contig1047.646.1|Name=mRNA_P-canaliculata_contig1047.646.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=14405bp|location=Sequence derived from alignment at P-canaliculata_contig1047:8172..22576+ (Pelvetia canaliculata dioecious)
ATGGGTCGAGTAAGGAGATATAAGAAAGTGAAGGCGATTGACCCCTTCGC
CAAGGGAGGCGATAGCAAGAAAGGACGGAAAAACCACGATCTTGATCGCA
ACCTTCCTCCGGACATTAAGAATCACCAGGCGCCGCGGATGAAAGCTCGA
CAAGGTACGAGTGTTGAAAGAAGGGAAGGAGGGAGGGAGGGAAACAGTTA
AGTGTAATCGAGTACCAGGGTATTACGTTAATAGCTAGAGTCGTTCAACG
AGACGGAAGAAGGCATTCGATGTCTAAGATAGACTACTGGTAGAGGAACA
GGTATCGAGTTTGGTGGAGCAAATTAGTACCCTGCGTAGTACCCTCAGCG
AGGTTTGTGTCTCTACCCCTTGGAACACCCCGGGCTTCAAGAAAGCACAG
TACTTGGCACCACCGATAATTCAGCGCTACGTAATATACTGCGATACGGA
TATACTCATAGACCACGATAAAACCCATTTGACAAACAGTATCTACAGGG
TAAGAGTTCGTCATGCAGTACCAATGTTACTGCCATCGGGGAACTCGTTT
AAATGCCGTGAAGAGGTTTTGTCTTCGCAGCCTATGACCCCACCTAAACG
TTTTGACATTTTCCCCCCTGACTGGATGGGGGATGCTCAGAAGGTCTAGA
TGCGTTCAGATTTTTTAAAAAATTAACTTTGAAGTTGCTGAAAGTGTCTT
ATCAGTGGTTTCAGCTGAGTGTAGATCAACCGGGTATATTTGCCAATCGT
GCTCATGGTTTTCCTGTCCCCGTACACGCCTGAGAGTCTGGTCTCGCGCG
CCGGGTTTGCCCGTCCTGTCCCGCATCAGCCCGCCCATTCTCCACACTTC
GGCTGAATCTGATGCTTGCTCACGGACTCCTGTACTTCCTCCCGCTTCCA
CGGACGGCGTCCATCGATCCCGTAAACCGCCACCGGGTCAGTCCCCGATT
TAATGAGGTCGCGCAAATTCGTGCTAGTTACGCTAACCCCTCCCGAGAGT
CCACTGGCGGGCCGGTAGTCGTCAATGTAGCTGGAGTAACGCGTGTTGCC
CACTTAGGTAAGCAAACCCATGGGTCAAATAATGTGCGCCTCTCTTTTCC
TCCCACACCCATTATTGGTACTATGGACAAGTACGATCGATCGTACAGAA
CAGCACTATCGGAGTACTGTTCTGTACGATCGATCTAATCTCGATCAATT
GTTACATGACAAGACCAGCACTTGTGACTGTAGATACTGTAGATACTAGT
GCTGCACAACAGATAGGAGTTGGGGTGTAAGAAAACAGAAACAGTTGTTT
AGACTTTTTTTCGTGGGCTTGAAAATGGAATCTCTGAAACTATATGGAGA
TCTGGAAACCTGGAAATGGGCCAATTTACGGCGGAGGTGTACCTGTCATG
TTTGATGGGACGGAAATCAGCAACCGGTTTTCGATACAATATCGTGGGAG
GTAAGGATACACTTCAGTTCAACTACTGTACGTTTTCAAAGAAAAATCTG
AACGCATTTAGACCTTCTGAGCATCCCCAGTCAGAGGGGTAAAATGTCAA
AACGTTTCGGTTGTATCATAGGCTGCAAAGACAAACCTCTTCGTGGCATT
TAAACGGGTTCCCCAATGGTAGTAACATTGGGTCAACAGCATCATGTCGA
GGAGGAACCCACCGTAATACTGTTCATTTACACTAATCGCCATGCAGGGG
CATCAAACAAAACAAAGACAAAACGATACGATGAGTCTGTAGTACAGCTC
AATTTGCAACACGTAACATTGGGTCTAGGATCGAATGGGTGTATCGATGA
AAGAAATCTACATGTCATGGATGTGGAACGGTACATACTTACAAGTAGTA
CAAATCAAGTAAAAATGAATTTCGAGATTAGCGAAGAGTTCACTTCACTA
AATCTATACTAATAGTCTAGAGCTACTGTGTAAATACGTGAGAAGTAAGG
TATACTTATTAACGGGTAAAGTCAAAGTGTTTGGGTTAAGGGTTTGAGAA
GGATCGGAGAGGGCGACCAGGCAGATATCTTCAACATAATCCAGAAAAGA
CAAGACACCTGTGTTCGCCTGAAAGTAGAGGAAGCAATGGAGAGTCGTAC
AAGGAATTAAAGTGAGAAGCTAGTAGGTGGAGGACCTTCCTTACTATCTT
ACTATTAATATCTGTCAGGGCTGCTGTACTTATGTCTAAACTTGGCACAG
ACCATTTTGTGTTACCATCGGTCATCACTTTCAGCAAACTGGGCATCAAC
CGGGTGCCCCTAAAGACTGACCAGGCGCTTGATTTTCAGGAGACTTATTA
ATACAATACAAAAGTACTGATGACCTCAAATTGAATTATTACAACTACTA
CAGTAGTAATCGGTAGTCGTCCAGTTAATATTAGTAAAGCTACGGCGCTG
ATTGAGTCGGTCATGAGAGAAATTGGTATAAATAGGCACCCCCTGAGATT
ACCGCCTACAACTTCAGTTTCACATCAATCCAATCTCGATTTTGGAACCG
CTGTACGGTGCAGCGGATGGACCACGGCGACTTGGATTTCTCGTATTGGG
AAGTTGTGGAGCAGAAAATGATTTTTCCGTCGGCTCTGTTTAAATCGCCA
TAGAAACGACCCAAGACCGCACTTGATTTGGGCTGGAACTCTGTTCCAGA
TTACTGGAGAATGCGTCATTTTCAGGTTTTGGGCTTACGGTGGACACCCT
TAGCAAAGCATTATTCTATGAGAGTCTGGAAATTGACACTGGTGTACGCA
ACGGGTCAGAGGCAGTTGATGCCGCGCACTTGACACAGTGATTGGTTGAA
GAGATGGGAGAGGACAAAATGACCAAGGGCAGCATGCTGGGGCCCGGCTC
CAGACTCTGCCCATATTGTTCGTGTCCAGACGACACCGGTGGATGTAACC
TCCAACATGCGTTTGGCATGGGCACCGACGAGTTGCTGCTGCTCTCTTCC
ACACAGCACAGAAAGAAAAATATGGTTTGCTCTCCAACAAAAGTTGTACA
CGCTTGCTGCACGACTGGGTTGAGAAGCGTGGCCTCGACGGAAATGATCT
GCTCTACCAGTACAGTAGCTGGTTTGGGAACGGCGGTAACAGTTGAAGAT
GGGCAAGCGCCCAAGCCTTATTATACTAGTAAAATTCCTTCCCGCCGCCC
GGCGCGCCTCGGTGTCGAACGGTATACTCTGGAGTACATTTATTTCAGGA
GAGCTAGGCAACTACGGGTCACTACATGCTTGTGTCCTATATATATATAT
ATATATATATATATGTATATATATTAGTATTGATGACAGCATCGTGGCAA
TGACGGCGACTCCCGATGCCAGCGCAGCATCGTTTCCGTGAACGGTCATC
ACTGGCAGCTTAAGTTTGACTTCGGAGGCTCTGGCGCTGCTGGCGCTACT
TTGCTACGAGCCAGCGTGTGATCTGATGGCTACACAAAGACCAATCTTGA
TCTCTCTGGGAACTGGTCGCCCATTTTCCAGAACCTGGCTGCCTTCGCCA
GATTCCTGACATCGGAATTCTTCAAATTGGGTCGATTTCGATCCCATAAA
ACAGGATTTTCAGAACCCTGAATGTGGTTCCCAGAAGCGGTCATATTTAT
TGGAAGTTAATCAAGAATCCGTTTTCGATATCGTGGGAAGCGATTATACC
GCTATCTAAAAATATATATACTTTTTTACGCCATTACCCCATCTTCTGAT
GACGTTTTGCCATCACTTTCAGCAGACCGGATATCATCCGTTTACGTCAA
TGGGGTCTGGAAAATGGACCCGATGATCGTTGAAATCGCCAACCAGGCGC
TCGAATTTCAGGACTACAGCAAAAGCCTTCAATTAAGTAGTAACCTGAGA
TTGGTTTTTTCCTCGAAACCCTGTAGTGAAGCTTTTGGCGCTGATTGGGG
CGTTATATAATATTATTATTACACCGAGATAACATTCTGCGGGAACGGCA
ACCCGGAGCACCGGACACCATGTGATGCCTTCTTTTTACGGCATACTTCA
ATTACTCTGCTTGTGAGCGGCGCTTAAGTATGTTCCTACTGAACATTGTC
TTTTCGTGCACGCCCAACGGAATGTGTGCCTTCGCCCGATTCCTGACATC
GGAATTCTTCAAATTGGGTCGATTTCGATCCCATAAAACAGGATTTTCAG
AACCCTGAATGTCGTTCCCAGAAGCGGTCATGTTTATTGGAAGTTAATCA
AGAATCCGTTTTCGATATCGTGAGAGGCGATTATACCGCTATCTAAAAAA
ATATATACTTTTTATCTGCCACTACCCCATCTTCTGATGACGTTTGCCAT
CACTTTCAGCAGACCGGATATCATCCGTCTACGTCAATGGGGCCTGGAAA
ATGGACCCGATGATCGTTGAAATCGCCAACCAGGCGCTCGAATTTCAGGA
CTGCAGCTAAAGCCTTTTATTAAATAGTAACCTGAGATTGGTTTTTTCCT
CGAAACCCTGTAGTGAAGCTTTTGGCGCTGATTGGGGCGTTATATTATAT
TATTATTACACCGAGATAACATTCTGCGGGAACGACAACCCGGAGCACCG
GACACCATGTGATGCCTCCTTTTTACGGCACACTTCAATTACTCTGCTTG
TGAGCGGCGCTTAAGTACGTTCCTACTGTACATTGTCTTTTCATGCCCGC
CCAACGAAATGGTAGCCAACCAAGCTTCAACTACTAAAATAGTGCACTGC
TCTTTGCCATATAAAGTACCGTTGATAGTAATCTTCTCTATACCCAGGGG
TTGGACCGATTGTACTTTTTCCCCGATGTCAAATGTCTCTGTCATACAGA
CAGCAACTATATATTAGTAGGACGGGATAAAAAAACAGGCATCGAGTCTC
AGAATGCAGCACGACTTCAGCACGGAGCATTTGACCACACGCTCTACCCG
AAGCAAGGGGAATGTCGAACAAACCTCGCGCGTGAACCAATGACCGATCG
CCTCGCCTTGGTGATAAAATAGTGGTGATACACAACACAGCTGGGGCTAC
GAGAATGGCTGACCATTCCCTCATATTCCTCGCCGCGCACCTCTCTGCTG
CTTAGGACCGTGTTTGCATGCAACTTCTGACCACGTGAAAACTCCAAAAA
GTCAAAGGTATCGAGCCGAGTTATTTAATTTTACTTTTTGATATCTCCGC
ACGGCTGTTCTTGGAGGAAACAGGCAGCGTGATAAAAAAATATTGGAAAA
GAGTTCACGTCCGAGCTGCTCATCTAACAAAATAACCATATCGTTGTTCC
AAACCTCTCAGCCACCGTATCCCTTTTGACCGAGGTAATCTTTTATTATG
GCCGCTTCTGAAACAGAGACTCTCCAAAAGCGTGTCCGCACTCCGCCTGT
CAAGCGGCCGAGCTGCTCAAGTACCGAAAAGCTCCCACCGTGGACTAGGA
CAAGTACAACCTGAGTCGTTTAAAGAAAACTCTGAACGCATCTAAACCCT
CTGAGCATCCCCCAGACAGGGGGAAAAATTGCCAAAACGTTTAGGTAGAA
ACATAGGTGATGGGCCTCATTATCATCCTGCCTGTGGTCACAAAAACTTC
CTATTTCTCCCCGGTCCACGCCTTACGGTTTTTGATCGCGATGCAAGTTC
ATCAATCTTAAGAGTCGTCAACCAATCATAGCGGTTGAATTTTACTTACT
CGCGTTCCCACGCTGCTTTCCGTTACGGAAGAAAGAACACAAGTCCTACT
TTGACAAGAATCAAACTCACGACTTCTGCTCTAGCAGGTGTGCAGGTTGC
CTACTAGACCTCTCGGGCGACAAGCTGCAAGGACTAACGCCCTTCATGGC
CTTTGAACGGGTTCCCCGAGGGTAGCAGCATAGGGTCAACAATATAATGT
CAAGGAGAAACCCACCGTTATACAGTACACTTACGTTAATCGTCATAGTC
ATGCAGGGACAAGAATGTTGTTTGTCGTCACGTTCACCAGGTTGAGCATC
AACCGTGTAGCTCTGTCATTGCCAACACTGCTGTTGAGGTCAGCTGTTGA
GTGGGAGAAGTCATTTTCCCTTCCCCCGTTCGTGATAATCTGGGCTCGCA
AGGCAGGTTCGACCGTCCCGTCCCGCTTCAGCGCGCTCATTCTCCAAACC
CGGACTGAAGCTGGTGTTTACTGACAGGCGATACCGTCAACCGCCATCGG
GTCAGTCCCGAGTGTATCAGGTCACGCAATGGCGTCCAGTAGCTAATCTT
CGAGGTAGCTCGAGCAAAGATTTTTGCTTAGAGCTATTGAGGTTTAGTAG
CCCCGTGGACCACTTGATGTGCGCATCTCTTAATCTAAAACATGTTTAAC
TGGTACAATGGGCATATGGATAGGGATGGCCTCCCTATGGTTAGTACTGT
TAATAGTACAAATGCCTGGCGTTGTACCGTAAGGTAATAAGATAGTATCA
GGTGGAGAGTACAACTGTGATAAAGTGCTCGTGGAGCACTTCAAGTAGCG
TGCGTGTAACCTCTACCACCTCTGTACGCGATCTTCTGGTGTCTGTTCAA
GCCAACGACACAACCACCAGACGTAGCACTACGGACGGTACCATTGTGTG
TGTGTGTGTGTGTGTTTGTTTTGACAATATGCGATCAAACCTTGAATCAA
ATCCAGTAAAATACGTGGTTACCATTCCGGTACGTGGTCTGCTGGACAGG
AAAATATGAGAGAAAGATATACATAGATTTAAAAAAAAAACGACGAAAAC
GATAAAAAAAAACAAACCAAAAGGGGGGGGGAGGGAAAAAAAAAAAAGGA
AAGAAAGGAAAAAAAAGGAGAAAGGGAAGGACAAAAAGGAAAAAAAAGGN
NNNNNNNNNAAACAAAAACACACAACAAAAAAAACCAACGAAGAACGGAA
CAACAAAGAACGCAACAGCGGGGGGGGATATACAGTAGAAAGCTGCAGCA
AGGCACAAAAAGTCGCAAGAGTAGGATAAAAATGAAAATCAATGGCGGGC
GTTGCACCTATACGCACGCGCGCAACAGACTCGGAGACGCTAGGGAGTGC
AGTACTACACTCCTGGCAAACAGACCAGGTTATAGGCCGGGTTGTAGATG
TATAGTGTCAGTCTCAAGCGCATCCGATAACCCCCCCCCCCCTCCGATCG
CAGTTACCTCGCATCACGTTAGCACACAAAGAAATAATAGCTATTAATAG
TACCCTTAGGATTCTCAGGCTCCCTCTCGGCGCAGCGGGCGCCGCTTCGG
GGATCCTTAAGGCGCTCCAACCAACGCTGCTCTGAAACTTCTCAAGCTCC
CTACCTTCAACCCTGATGCAATCTCAACCTTGTTCACCTCTTCCATCTCT
ACTCCTCCGCCGATTCTCGGGTGCCTTCTCCTCCCTCACCCACGCGGCCA
TGAATCTGCGTCCCCGTTCGCATACTGCATCTTACCACGTCCCAGGGTCT
AGGGCGGTGGTACTCCAGTTCTCAGCGATCCCAAATGTCCGAATATCATC
TCCACGCAATCTACTTATTCCTTTCCTCCCACATAGTCGGACGCCGTCAC
GCATTCTCCAACTTTTATGGCATCATCCGTGCGGGTAACCTGTGGTCGCC
CGCTCGGAAAAGTGCTCCTGCCCACGATAACCTCCTCGAGCGCACGGTTG
TCTCGATGGTTTCACATACAGTTGGTTCAGGAGCGTCGTTTTTTGAGAGG
ATGCGGTTGTCCGGCGACCTGCTACTAGACTTCGAGGGTTCGAAGCAACA
TCGTGTGGTGTACGATGCGAAGCTTGTTTCAATGAGCCTCTAGAGAGGTC
CACGTCACCCTCCCGTATAGGAGACCCTCTACTATCTCAGGTTTCACCAT
CCGTGCCTTCCGGCGCAACAGGCTTGCGTTCGGGTAGTCGTACAGTTCCC
GCTTGTGCCGGTTGAAACCCAGCCACCCCGCACTAATCCGCCGGTCAATT
TCGTCCGACAGATGTGGGATTCCAATGACGGCGCCTTCCAGGTAGGTGAA
GGAGGTGGTCTAGAGAAAATGATGCCCCGAAGCGTTGAAATCTATCCGCG
TTGCCGGCGCAAGCGGGATTAGCATGCACCTTATCTCCGTCTTGTTCTCG
GAGAGTCATACCAAATGCGATAAGACTTCGACGAAGACTGCCACCGTCAT
CTCAAACCCGCGCGGCGACCGCGACACGATGCGCGCATCATTAGCGTACA
GCATCCCCCACACAGCACGTCGCGCACATTCCAGTGCTGTTTCGGGGCCA
ACCTTCGCCAGCTGCTGTTGACGATGGCAAGTTTGTCGGCGTCCTCCCTG
AATCGCTGTAGCGCGACGAGGAGTATCGTAGCGAAGAAAACGTTGAACAA
AAGCGGAGAAGTACGCATCTTCGACGCAGTCCCTGTGTAACCTCGAACCA
TTCCGAGTACACGTCATTACCATCCCGCACGCAAGCTCTCATTTTAGCGA
CATCTACGATGGCAATCCGACGCGGATGAGTAACTACTGAACAACTGTGC
GGTCGACAGGGTTGTAGGCCTTCTATAGATCAATGAAACATAGTCCATGC
CCACTTCATACCAGTAGTGGGTGTGGGAAAAGAGAGGCGCACATTCATTG
GTCCATGAAAAAAAGCAACACCCGTTACTGGAACTACCTTGAGGACTACT
GGCCGTGTGCCGGCGGACCCTCGGTAGTGAACGCTATCGGCACGCAATTG
CGTGACCTGATAAACTCGGGACTGGCCCGGTGGTGTATGGCGGTGTATAA
AGACATGAACGCCGCCGCGGAAATCGGGAAGAATCCCCTAAGTAAGCGCC
AGATTCAGCCTGAGTGTGGAGAACGAGAAGGCTGACGCGGGACGAGACGG
CCAAATCTGTCTCGCGAGACCATATTCTCAGGCGCGAACGGGGACAGGGG
GATACCGTAAAGAACGGAGTAAACGCCCCCCGGGGCGTTCCATAAAACAA
ATCCGAAATAGCGCTCCTGGGCCGTTTCAGAAGGAAAACAAATGTTGGTC
TGCTCGTGTTGAGTCCACTGGTCGAGACACCAATGTAAAAAAACAGGTTG
AGTTGAAGAATAAATATGAAGTGAAAAAAAATACCCGCCCTATTCCTCCC
ACTGCATATGCTGCAAAGCGTCCCTTTCCGCTTCGTCAGCAGGTGCTTTT
CGCGCACCTTCTCGTGTCATGGGCTCGCCCCACGGGGCCCTCCTCTCGAA
AAAGCGCGAAAAAGAACGCCTCGGGACGTTTTTAATTAATAATTTTCAAA
TCAAGGCGCCCCCGGGCGTTTGCTCCGTTTTTTGCGAGTTTTTGCGATCT
TTAGCGCCCGGGGCGTTTGCTTTGATGGGGGCGTTTACTCCGTTCTTTAC
GGTATCCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCCTA
TCCGGTTGATCCACACTCTTGCTATAAATGATGACTATACAGGAAAGGTG
GAATGCGCGCTTTCTTTTCCAGTTCTTGAAGCCCTACGAACCGCAGACGA
CATGTCCGTGATCGAGCGATGCGGTCAAAACTCGCGCTGCTCCTCCTGCA
GCAGCCCCCCAGACTCGCAGTGGGCGCCGAGTCTCGTAGGAACTATCTGG
AGGACGTTTTTACCCGCGTGTGCTACAAGAAAGATGCCGGGGCAGTTCCC
GCACCGGTCCTGTAGTTCTCTCCGCTGCGTACTTTCCGTTAGCACCACAC
CAGCTTGATCACTCGGCGAAGCTCCGGGAGCACCACGAATTCATCTGGTC
CAACTGCCTTCGCCATCGCCATCAATCTTGAGTGTACGGTTGCTTGGTCT
TCCGTCGGCTCGACCCCGAGAGCATGAGCGACAAGCTGCTGAGAAAGTCC
TGCGAGGATGTCGGGTTTGAGCTTGTCAGACTTCGCGTTGAGAGGGACTC
TGAAGACCCCCACCCATCTCCCGAGAAAGAGCCCTGAGTCTCGCAACATC
TTCGCCTCTTCATCGCGGATGCCTTTGTAAATTAGCTTTTCGCGTGTCTT
TTATCCTCAGGGACTTGAGGCGCTGGAAGAGTCCCCTCTGATAGCTTTAA
CGCAACTCCTCCTCCAGACGCTGAACAGGTTTCTCGAGAAACCTGGCGTA
TGCGACGCCCCAGACCCTTTGAAACATGTGTGTTCGCTCGCCGGACAGCT
CTCTTCAGCTGATTGTCCTGCGTTTTATCCTTCTGCCGCTTCCAGACTGC
TCTTGTCGCGGAGCTCTACCTCCGCCTGGGCATCGATCCTTGATCGTGGC
CCCGGAAGCCTGCGCCCTTGCGGCGGCGCAACCAGCTCTGCTGTCTGCAG
CACGGTCCTTGCAAAGGCAGCCGCTTCACCCACACTGCTGCCGCTTGGGT
GGGCCTCCCTGAGGTGGTCTGCGAAACGCTGTCGCCACTTTCTGGTGAGA
TGGGCGGAGTTCTAATTACCTCCTCACCTGTCGGTCGCGTGCCCAAACGG
CCAAGCACTTTTACATATGCTGTCAAAGATGTGGCCCGAAATATAGGTAG
GAATGGCGGTTGGGACTGCACAGTAGCGTTCCGCACGAGTTTTTGGTCTC
ATAGCCAATAACAGTATGTTTTTTGCCTCGCCAATTGAAGGTACGCGAAA
TTCCGTTCTTGGGGAGTGCTGAAGAACGCATTCGACGGTGCAAGGCCATG
GTTGGCAGATAAGGCAAGTATTATCAGTCGCTCATTATTGTTGAGCGTAT
CTCGGCCCCAGGCATGAGAATCTTCCACTCCAAACTCCCGATCCTCTCCG
TCCCGTGTGATCGTTCGCGTCCATCGGCCACTTCCTCAACGGCTTTCCAG
AAAGCATACTCCTTTTTTCGAAGCAACTTGAGCGTCTGCTGTGGCATAGG
CAACAGCAAACGTTACAGCCCAAGCTTGACCGCACAACTCAAGCGTCACC
TTCAGGAGCCGGTCACTGAATAACTCCGGTGATCGTACTTCGGCACGAGA
CACCCTCTTGCGATCCGTCAGTCCAACTTCACCTTGACCCTTCTTTCGCT
CGCCTCCAGACTCGCCACTGCAATAGACGGGTGAGTTCAAGCGGGAGGAG
TCACCGTGCACCGCTTCGCCGAGTCATCCAGCGTAGCGCTCGGAGCCCAC
AGCCCGCCTTGGGTCCATGGTGCTGCGAGACGGAGGGCTCCGTGGCGTGC
ACTCGCGCGGGAGGTGCCATGTTGAGACTGATGTTCAATTTTTCTTTGCA
ACACATCATTTTCAAGCTGAAACATTTTTTTTTACTTTGAAAATGGCGCC
GCTGGGTGGGAGCTTTCGCGTCCAGATTTATTTTTATTTTTGACATTAAA
ATATTTTTTCGTATGGTTAAAAGTGTCATTCGAAACCGGCCCTGGGCATC
AAAAGGGCCGTTTCATAAAGTTTTTTTTTGTTTAGCTTCTCGTCACGGTT
GAAGAGAAGCAATACCTTGGGCTGTACCACGGGTCCGAGGAGATCAATCG
GGGAAACGTGTTGAACCTGTACCCTACGACAAAACCTGGGAAGCATACGT
TACCGGTACGAACACGTAATCTATTGACCTTTAAATCAGCACGGAGGCTT
TTGAGATTGGTATGTTGTCATAAAACTGTGTGCAGACTCCATTTCGGGCG
TAAGGAACTGAGAATATCCATCACCTATCCCCTTACTAGGTGATGTGTTT
CCCTCGATGCCAATGGTACACGTACTTGACCTCACCAAACATTACTAATC
TAGTATAATAGAGCTAGAACGTGGCTCTACAACACGTAGTACATTTTGTT
CAACCTCCGAGGACGACGTGGCTGTGCTTTCACTCCTTTCGATTGACGGT
GGAATGCAGATGGAGGTAAGAGGAAGACCAAGCGCCGCCTACCACAGTGG
GCGCAAGACGAGCTCAAAGAGACGGCCAAGAGGGAAAGGGAGGAGCGCTC
CGACCCGCTGGTAGATAACCAACAGCCTCAATCAAAGGCAAGTGTCCAAC
CTTGGGAAAACCTACCGTTACATCATACTCCGGAGTATTTGTTTTTTAGG
GTGTTCCATTAAAAGTGCCAACCGCAGTAGTTGATGGTGATACTGGCACT
GGAGCTTGAGCACACGCTGAAACGCGACGCTCGGTTGGCACCCAGAACTA
GGAAACCAAAGTCGTGCAGGGCAAAATAATAGGTATCGCTACAAGTTGTG
CTACCCTCCCCTGGCCTATACCTTATCCCTGTATGATGATCTATGAAAGC
AGCCCGAGATAGAGGGCAAGCGCGAGGACGAGAGCATGCGCGAGTTCCAC
AGTCGAGTCCAAGACCGAAAGACGCAACTTCTGAAGGAGAGCTTCCAAGA
GCATAGCGCCACCCGAAACAAAAAAAAGAGGTGTAAACATCGCACCGCGT
CTGGGAAGGCGTTTCAGTAGACGGGGTAAAGACGGTCATTGTGGCTCGTC
CGCTCATCCAAGTCTGGGAGGAGAAAATATGTTTTGCAGAGAAATTATGT
TGGATGTTCCGAAGAGTAGAATATGTTTCCATTCTCAAGACTATGTATTA
TCCTGTTGCTTACGGCGGGGGGCTGTCCAGAGCTGTATTGGTACAAGCCC
TCATATGCGGCATACGTTACATATGGTACGCCAGCCCGAAAATGAAAATA
CGCTATTCTTCTTCCCATCGCCAAATCGTCCTGGGTTCTTAAAAAACTGA
GCACACCGTCAAGGCGGTTTTCGACGACCGTCACTCTGTTTTGTCTTACC
GCTCTTACAGGTACATGGACGAGAAGAAACGCAAGAAGAAACTCCAGAAG
CGAGGTCTGTGGGAGGAGGCCAGACGGCGCGAGCTTCTAGACCAGGAACA
TGACGCCGAGGATGATCGACGAGACGGCTCGTCGACTGGACCAGGAAGAA
AGCCTCCGACTACGGCAGGGGATAGAAAGCGGTCAACCGGAAGCAGCGGT
GGGGTTATCGGAGCAAGATCCCGGAAAGCGAAGCGCACAGATGGAGGCGA
TGAGGATACAGCGGTTCTCGGAGTGGAACGTATCAGGTACTGTATCTAGA
CCGCAATCGTTCTGCCGATGCAGTTTGATAGTTTCACATTGCTTTGTCGA
TGGCCGGAGGTTGCGGGCAATCCAGGGAAAGGGAGGACCAAGCCTTTCGG
TGCTCTTTAGTTCGTGTCATGCGCCCGATGTTTTCGTGATGTTTGCCGTC
CGTTCGTGAAGAACCGCCGTAAGCTTTCAGCGGAGATCGACGTTGAAACC
CTCCGTCCGACGGCTTTTGTGGGGTTGATCAAGGTAGCCCAGTGGGTGCT
GGTACCACCATAACCCTACACTGTGTGGCGTAGCTCAGGGGCGCTGCTCA
GATTTACTGACGTATCATTCCCGCCCAGTTTGCCTCGTAACGTTCATGGA
TGTTCTTAAATATCACAGGTTCGGAGAAGTCGTGCACGCTCCCCCCAACC
TGGCCAAGATTCCGAAACCGAAAGGCCTAAAAGAACAAGGGAAGACAAAA
CCTTGGGTCAGAGGCTCCACCGGGGCTCTACCCGACGAAACCAGTCGCAG
AGACCAACTCAACGGTTCGAGAAAGCATCAATTCAACAAGCGGGACGCTA
GAGAGACTGGGAACATGGATGAGTTGCCGGACGTTCTCCGGCAAAGGCAA
GAGGGAATGCAGGACTATGACAAAGCGCAAAGTCGTCAGATGGAAGAGAT
GAGACAGCGTGTGCAAGAGGCCTACACTGGACTGAAGAAGAGGAGGCGCG
CTGGACAGACACAGTACATCGGCAATGACCTATAACTCTAGACTGGAGAT
CAAGTGTTTTTGTTAGAACGGAGTCAGGATATAGAGGAGCCATCCCGAGC
CTGTTTCCAAGACGCGCGTTTTCTGTGCGTAGATGGTGGAACCGAGTGCA
GCTTGGGGGCCTGTGTTGTTTCGTCAATTTCCCCTAACGCGACGCGGAGG
ATGTGGCATATCGCCAAAGGCGGCGTGGAATATAGGTTCATGTGAAATGA
TCTGGGAGCATTTGCGGTCCAGTATCCGCTTTTTTTCGTTGTTGGTTGAC
ACGAAGTACATCTCTCCTTTGGACCGAGCCTGCGTTTTCGGACCTACTTG
TTCGTGTTGCATCGTTAGTCGATGTTAGGAACAAGTGAAGCTCGTACAGG
CAAGGGAAACCATGCTCGTTGTCCTTGATAATTTCCCGAGTTATCTGTTG
TCGCGGGGGGTAGAATGTAGCTCGCGTGAAATTGCCGTTACTTTATTTGA
ACCGGACGGTGGGAATAACCGAGGTAGTGAAGTCCCACGATGCATGATCA
GGGGGTTCAGTCGTTTCTCGAGAGGGTACTTGCGCGTATCGGAGAGAGCA
AGTCGTTTACCCTCCCCCTGCCCAAACACGAAAAACAATGGGACAGAAAA
ACAAAATAAAAATCGAACACTGGCAGTAACGGTCTTTTCTGGCTCCCGGA
AGGGAGGCATGGTAGGCTTACTTCTAATGCTCACGTAACGCTAGATTGAT
GAAAA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig1047:8172..22576+ >mRNA_P-canaliculata_contig1047.646.1 ID=mRNA_P-canaliculata_contig1047.646.1|Name=mRNA_P-canaliculata_contig1047.646.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2118bp|location=Sequence derived from alignment at P-canaliculata_contig1047:8172..22576+ (Pelvetia canaliculata dioecious)
ATGGGTCGAGTAAGGAGATATAAGAAAGTGAAGGCGATTGACCCCTTCGC
CAAGGGAGGCGATAGCAAGAAAGGACGGAAAAACCACGATCTTGATCGCA
ACCTTCCTCCGGACATTAAGAATCACCAGGCGCCGCGGATGAAAGCTCGA
CAAGGTACGAATGGGTCGAGTAAGGAGATATAAGAAAGTGAAGGCGATTG
ACCCCTTCGCCAAGGGAGGCGATAGCAAGAAAGGACGGAAAAACCACGAT
CTTGATCGCAACCTTCCTCCGGACATTAAGAATCACCAGGCGCCGCGGAT
GAAAGCTCGACAAGGTACGAATGGAGGTAAGAGGAAGACCAAGCGCCGCC
TACCACAGTGGGCGCAAGACGAGCTCAAAGAGACGGCCAAGAGGGAAAGG
GAGGAGCGCTCCGACCCGCTGGTAGATAACCAACAGCCTCAATCAAAGGC
AAGTATGGAGGTAAGAGGAAGACCAAGCGCCGCCTACCACAGTGGGCGCA
AGACGAGCTCAAAGAGACGGCCAAGAGGGAAAGGGAGGAGCGCTCCGACC
CGCTGGTAGATAACCAACAGCCTCAATCAAAGGCAAGTATAGAGGGCAAG
CGCGAGGACGAGAGCATGCGCGAGTTCCACAGTCGAGTCCAAGACCGAAA
GACGCAACTTCTGAAGGAGAGCTTCCAAGAGCATAGCGCCACCCGAAACA
AAAAAAAGAGATAGAGGGCAAGCGCGAGGACGAGAGCATGCGCGAGTTCC
ACAGTCGAGTCCAAGACCGAAAGACGCAACTTCTGAAGGAGAGCTTCCAA
GAGCATAGCGCCACCCGAAACAAAAAAAAGAGGTACATGGACGAGAAGAA
ACGCAAGAAGAAACTCCAGAAGCGAGGTCTGTGGGAGGAGGCCAGACGGC
GCGAGCTTCTAGACCAGGAACATGACGCCGAGGATGATCGACGAGACGGC
TCGTCGACTGGACCAGGAAGAAAGCCTCCGACTACGGCAGGGGATAGAAA
GCGGTCAACCGGAAGCAGCGGTGGGGTTATCGGAGCAAGATCCCGGAAAG
CGAAGCGCACAGATGGAGGCGATGAGGATACAGCGGTTCTCGGAGTGGAA
CGTATCAGGTACATGGACGAGAAGAAACGCAAGAAGAAACTCCAGAAGCG
AGGTCTGTGGGAGGAGGCCAGACGGCGCGAGCTTCTAGACCAGGAACATG
ACGCCGAGGATGATCGACGAGACGGCTCGTCGACTGGACCAGGAAGAAAG
CCTCCGACTACGGCAGGGGATAGAAAGCGGTCAACCGGAAGCAGCGGTGG
GGTTATCGGAGCAAGATCCCGGAAAGCGAAGCGCACAGATGGAGGCGATG
AGGATACAGCGGTTCTCGGAGTGGAACGTATCAGGTTCGGAGAAGTCGTG
CACGCTCCCCCCAACCTGGCCAAGATTCCGAAACCGAAAGGCCTAAAAGA
ACAAGGGAAGACAAAACCTTGGGTCAGAGGCTCCACCGGGGCTCTACCCG
ACGAAACCAGTCGCAGAGACCAACTCAACGGTTCGAGAAAGCATCAATTC
AACAAGCGGGACGCTAGAGAGACTGGGAACATGGATGAGTTGCCGGACGT
TCTCCGGCAAAGGCAAGAGGGAATGCAGGACTATGACAAAGCGCAAAGTC
GTCAGATGGAAGAGATGAGACAGCGTGTGCAAGAGGCCTACACTGGACTG
AAGAAGAGGAGGCGCGCTGGACAGACACAGTACATCGGCAATGACCTATA
AGTTCGGAGAAGTCGTGCACGCTCCCCCCAACCTGGCCAAGATTCCGAAA
CCGAAAGGCCTAAAAGAACAAGGGAAGACAAAACCTTGGGTCAGAGGCTC
CACCGGGGCTCTACCCGACGAAACCAGTCGCAGAGACCAACTCAACGGTT
CGAGAAAGCATCAATTCAACAAGCGGGACGCTAGAGAGACTGGGAACATG
GATGAGTTGCCGGACGTTCTCCGGCAAAGGCAAGAGGGAATGCAGGACTA
TGACAAAGCGCAAAGTCGTCAGATGGAAGAGATGAGACAGCGTGTGCAAG
AGGCCTACACTGGACTGAAGAAGAGGAGGCGCGCTGGACAGACACAGTAC
ATCGGCAATGACCTATAA back to top
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