mRNA_P-canaliculata_contig10465.639.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig10465.639.1
Unique NamemRNA_P-canaliculata_contig10465.639.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Match: D8LNX9_ECTSI (MFS_1_like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNX9_ECTSI)

HSP 1 Score: 484 bits (1245), Expect = 1.420e-162
Identity = 241/284 (84.86%), Postives = 266/284 (93.66%), Query Frame = 1
Query:    1 RQRKWKWKPKYLAVKAVFFLFYSSLGAIMPYLPVYYHSLALPDRQIGHLGAITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAWIVSFIALTAIVNAPVRPLLDSSALQTLDDRGEYGKQRLWGQWGFGIGSFLTGRLLSRFGFKAAFYMHAAFSIPTLLILLRFTPRKEDRTKGPPRFGELYRLMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVSSLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR 852
            + ++ +W+PKYL VKAVFFLFYSSLGAIMPYLPVYYHSL +PDR+IGHLGAITPAMTFLFTPLWGALTD+SGMLKQILV TF  STLLRVSLAARTSF WIVS I LTA++NAPVRPLLDSSALQ+LDDR EYGKQRLWGQWGFGIGSFLTG+LLSRFGFKAAFYMHAAFS+PTLLIL+RF+P+KEDR K PP+FGELY+L+VHDPDV  FFSMVFAIGLSSGVIENFAYKRLRELG +GSVLG+SRLVSSL+GIPMFFFSG IVK+FSIV ILTA+MMS+IAR
Sbjct:  470 KAKRMRWEPKYLTVKAVFFLFYSSLGAIMPYLPVYYHSLGIPDRRIGHLGAITPAMTFLFTPLWGALTDKSGMLKQILVLTFAASTLLRVSLAARTSFLWIVSVITLTAVINAPVRPLLDSSALQSLDDRAEYGKQRLWGQWGFGIGSFLTGKLLSRFGFKAAFYMHAAFSLPTLLILMRFSPKKEDRGKEPPKFGELYQLVVHDPDVLVFFSMVFAIGLSSGVIENFAYKRLRELGGTGSVLGVSRLVSSLSGIPMFFFSGAIVKHFSIVGILTASMMSFIAR 753          
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Match: A0A836CD83_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD83_9STRA)

HSP 1 Score: 313 bits (803), Expect = 5.700e-100
Identity = 162/280 (57.86%), Postives = 210/280 (75.00%), Query Frame = 1
Query:   19 WKPKYLAVKAVFFLFYSSLGAIMPYLPVYYHSLALPDRQIGHLGAITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAWIVSFIALTAIVNAPVRPLLDSSALQTLDDRGEYGKQRLWGQWGFGIGSFLTGRLLSRFG--FKAAFYMHAAFSIPTLLILLRFTPRKEDRTKGPPRFGELYRLMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVSSLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR 852
            W+PKY+ VK +F L+Y+SLG +MPYLPVYYHSL   +R+IGHLGAITPA+TF  +PLWGALTD +G LK++L+ TF  S + RV    R ++ ++VS IALTA VNAPV+ LLDSS L  LDD+ EYGKQRLWGQ GFG+GS+L G +++R G  +KAAF +HAA S PTLLILLRF P+   R   PPRF E  R++  + D+ AFF+++FAIG+SSGVIENFAYKRL +LGA   VLG  RL+SS+AGIPMF+ SG + +  S+  +L   +  ++AR
Sbjct:  199 WRPKYIIVKVLFLLYYASLGVVMPYLPVYYHSLGHGNRRIGHLGAITPAVTFFVSPLWGALTDSTGRLKEVLLFTFAASVVFRVLTITRETYPFLVSIIALTAAVNAPVKTLLDSSVLNLLDDKREYGKQRLWGQCGFGLGSYLIGVVMARHGLTYKAAFKIHAAISAPTLLILLRFRPKAMPRE--PPRFREGLRVIAGNRDMVAFFALIFAIGVSSGVIENFAYKRLAQLGAEKRVLGKLRLLSSVAGIPMFWVSGNMTRYVSVEGVLLLTLAGFVAR 476          
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Match: K8YPX5_NANGC (MFS domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YPX5_NANGC)

HSP 1 Score: 289 bits (739), Expect = 2.980e-91
Identity = 154/318 (48.43%), Postives = 204/318 (64.15%), Query Frame = 1
Query:   34 LAVKAVFFLFYSSLGAIMPYLPVYYHSLALPDRQIGHLGAITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAWIVSFIALTAIVNAPVRPLLDSSALQTLDDRGEYGKQRLWGQWGFGIGSFLTGRLLSRF---GFKAAFYMHAAFSIPTLLILLRFTP-----------------RKEDRT-----KGP--------------------PRFGELYRLMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVSSLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR 852
            + VK +F LFY SLGA+MPYLPVYYHSL LPD+QIG LGAITPA+TF+  PLWGAL D++G  K +L+ TF+ S + R+    RT+F W+   +  TA++NAPVRPLLDSS L  L+D+ EYGKQRLWGQ+GFG+   + G  L      G+KAAFY+HA  S+PTLLI+ RF P                  K +++     +GP                    PRF E   ++V +PD   FF +VF IG+SSGVIENFAYKRLRE+G  G+V+G+SR  SS+ G+PMF+FSG + +  S++ +L  ++ SYI R
Sbjct:   98 VTVKLLFLLFYGSLGAVMPYLPVYYHSLGLPDKQIGMLGAITPAVTFVVAPLWGALADQTGRHKDVLLFTFVASVVSRLLFIWRTTFGWLAILVFCTAVLNAPVRPLLDSSVLNLLEDKREYGKQRLWGQFGFGLAGCIVGPCLMNHKFGGYKAAFYVHALISLPTLLIMRRFNPTPPAPAPSSPPLPVASTNKSEKSSMAKEEGPGAVALPSKAPSAALSSQPAKPRFREGLGIVVRNPDALIFFFLVFVIGVSSGVIENFAYKRLREVGGEGTVMGVSRFFSSVTGVPMFWFSGNVTRRLSVMGVLILSLCSYILR 415          
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Match: A0A7S4EIB8_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EIB8_9STRA)

HSP 1 Score: 210 bits (534), Expect = 4.670e-60
Identity = 124/334 (37.13%), Postives = 184/334 (55.09%), Query Frame = 1
Query:   34 LAVKAVFFLFYSSLGAIMPYLPVYYHSLALPDRQIGHLGAITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAWIVSFIALTAIVNAPVRPLLDSSALQTLDDRGEYGKQRLWGQWGFGIGSFLTGRLLSRF---------------------------------------GFKAAFYMHAAFSIPTLLILLRF-------TPRK-EDRTKGP--------------PRFGELYRLMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVSSLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR 852
            + ++ +FF +Y+SLG+++PYLPVYYHSL    + IG LGAI P  TFL  PLWG ++D++G    +L   FLVS + +++++ R    WI+S + +TA+ NAPV+ L+DS  +  + +   YG+ RLWGQ GFG+GS + G +LS+                                        G+K  F+ HA  SIPT + +  F       TP   E+ TKG               P   E  R++ H+ D   FF +V  +G+SSGVIENFAY R+RE+G SG  +G+SRLVSS+AG PMF+FSG + +      +L  ++++Y+ R
Sbjct:  144 ILIRIMFFTYYASLGSLLPYLPVYYHSLGHGGQVIGMLGAIKPFTTFLVAPLWGIISDQTGSPFTVLYFAFLVSLVGQLAVSWRHDPFWIMSMVFITAVFNAPVKSLIDSMVMSNIKNGKLYGRLRLWGQLGFGVGSSVVGLILSKSQQAQQLREAMGDTTLTTAAIMGGTGTMMEKLDQIWQKITGYKLLFFTHALLSIPTFVCIRAFHRWTKKVTPTAAENSTKGTSSKKIRGSKTNESKPNVLEGIRVLFHNSDALLFFFLVLVVGISSGVIENFAYVRIREVGGSGKEMGLSRLVSSMAGAPMFWFSGPLTELLGADRVLALSLVNYVFR 477          
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Match: B8BR57_THAPS (MFS domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR57_THAPS)

HSP 1 Score: 204 bits (519), Expect = 5.420e-59
Identity = 117/275 (42.55%), Postives = 171/275 (62.18%), Query Frame = 1
Query:   37 AVKAVFFLFYSSLGAIMPYLPVYYHSLALPDRQIGHLGAITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAWIVSFIALTAIVNAPVRPLLDS---SALQTLDDRGEYGKQRLWGQWGFGIGSFLTGRLLSRFGFKAAFYMHAAFSIPTLLILLRFTPRKEDRTKGPPRFGELYRLMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVSSLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR 852
            +++ ++  +Y+SLGA+MPYLPVY+HSL      IG LGA+ P  TFL  PLWG ++D SG     L  TF+ S +L++ +   ++  ++++ +  TA++NAPV+ L+D+   S L + +D+ ++G+ RLWGQ GFG+GS L G LLS F   A        S P        TP K   TKG      L +L+  + D   FF +VF IG SSG +ENFAY R+RE+G SGS +GI RLVSSLAG PMF+FSG + +   +  +L  ++++Y+AR
Sbjct:  102 SMRILYLTYYASLGALMPYLPVYFHSLGHTGSSIGLLGAVKPLTTFLVAPLWGVISDWSGDHVSTLQFTFVSSLILQLLVGTNSNLQFLIATVFATALLNAPVKSLIDTIVMSKLTSEEDKYQFGRMRLWGQLGFGVGSSLVGYLLSMFPADAT-------SQPAT------TPDKAGETKGTSIMEGL-KLLSLNSDALIFFFLVFVIGTSSGCVENFAYVRVREVGGSGSNMGILRLVSSLAGAPMFWFSGPLTEALGVDVVLVLSLLAYVAR 362          
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Match: A0A7S2XSE9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSE9_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.220e-57
Identity = 125/336 (37.20%), Postives = 178/336 (52.98%), Query Frame = 1
Query:   34 LAVKAVFFLFYSSLGAIMPYLPVYYHSLALPDRQIGHLGAITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAWIVSFIALTAIVNAPVRPLLDSSALQTL--DDRGEYGKQRLWGQWGFGIGSFLTGRLLSRF-------------------------------------------GFKAAFYMHAAFSIPTLLILLRF----TPRKEDRTKGPPRFGELY--------------RLMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVSSLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR 852
            + +K +F  +Y SLG +MPYLPVYYHSL      IG +GA+ P  TF+  P WG L DRSG   +IL  TFLVS + ++S++      ++V     +AI+NAPV+ L+DS  +  L  +DR +YG+ RLWGQ GFG+GS   G LLSR                                            G+K  F  +AA SIPT L L +F    T +++      P+  ++                +++H+ D   FF +VF +G+SSG IENFAY R+RE+G SG  +G+SRLVSS AG PMF+FSG + +      +L  +++SY+ R
Sbjct:  138 ILIKVLFLSYYGSLGCLMPYLPVYYHSLGHGGLIIGMIGAVKPLTTFIVAPFWGFLADRSGDKFRILKLTFLVSLIGQLSVSYSHEVNFMVGMTLFSAIMNAPVKCLIDSMVMDNLNEEDRSQYGRLRLWGQLGFGLGSSGVGMLLSRSQALFSDNADTAPSMAPLVEGAAYVQNGMRQLHNFGIHFWHNLTGYKLLFASYAALSIPTWLCLQKFHKMETEKRQIAATQSPKGKKVIVEEEKRGANVLQGLNMLIHNSDAILFFFLVFVVGISSGCIENFAYVRIREVGGSGKEMGLSRLVSSAAGAPMFWFSGPLTERLGADRVLVLSLLSYVLR 473          
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Match: A0A1Z5KL90_FISSO (MFS domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KL90_FISSO)

HSP 1 Score: 207 bits (526), Expect = 6.860e-57
Identity = 131/351 (37.32%), Postives = 182/351 (51.85%), Query Frame = 1
Query:   25 PKYLAVKAVFFLFYSSLGAIMPYLPVYYHSLALPDRQIGHLGAITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAWIVSFIALTAIVNAPVRPLLDSSALQTLDDRGEYGKQRLWGQWGFGIGSFLTGRLLS---------------------------------RF---------GFKAAFYMHAAFSIPTLLILLRFT---------------------------------PRKEDRTKGPPRFGELYRLMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVSSLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR 852
            P    ++++F  +Y SLG++MPYLPVYY SL    + IG LGA+ PA TF+  P+WG L D+      IL  TFLVS + ++ LA R    +I++ + +TA+ NAPV+ LLDS  L  + D+ +YG+ RLWGQ GFG+GS L G LLS                                 RF         G+K  F+ +AA S+PT L +  F                                   + E  T  P    +   L+ H+ DV  FF +V  +G+SSGVIENFAY RLRE+G +G  +G+SRLVSSLAG PMF+FSGR+ K   +  +   +++SY+AR
Sbjct:  776 PINFLIRSLFLCYYGSLGSLMPYLPVYYDSLGHGGQIIGLLGAVKPATTFIVAPVWGLLADQLQNPFLILQLTFLVSLVGQLLLACRDDAKFIMAMVFVTALFNAPVKSLLDSMVLDHIPDKTQYGRLRLWGQMGFGLGSSLVGVLLSKSKQIHFRDTTTHPELEVWLAEQFSSSYVRQAIRFLDKFWQSLTGYKLLFFTYAALSLPTWLCIQAFRRLDVQQQQEEKARKALISETVAKAKKXDKEQARQKTETSTAAPNATLQGLSLLFHNTDVLFFFFLVLVVGISSGVIENFAYVRLREVGGTGKEMGLSRLVSSLAGAPMFWFSGRLSKALGVDRVFVLSLLSYVAR 1126          
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Match: A0A1Z5KMM0_FISSO (MFS domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMM0_FISSO)

HSP 1 Score: 193 bits (490), Expect = 6.110e-55
Identity = 126/331 (38.07%), Postives = 172/331 (51.96%), Query Frame = 1
Query:   85 MPYLPVYYHSLALPDRQIGHLGAITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAWIVSFIALTAIVNAPVRPLLDSSALQTLDDRGEYGKQRLWGQWGFGIGSFLTGRLLS---------------------------------RF---------GFKAAFYMHAAFSIPTLLILLRFT-----------------------PRKEDRTK----------GPPRFGELYRLMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVSSLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR 852
            MPYLPVYY SL    + IG LGA+ PA TF+  P+WG L D+      IL  TFLVS + ++ LA R    +I++ + +TA+ NAPV+ LLDS  L  + D+ +YG+ RLWGQ GFG+GS L G LLS                                 RF         G+K  F+ +AA S+PT L +  F                         RK+D+T            P    +   L+ H+ DV  FF +V  +G+SSGVIENFAY RLRE+G +G  +G+SRLVSSLAG PMF+FSGR+ +   +  +   +++SY+AR
Sbjct:    1 MPYLPVYYDSLGHGGQIIGLLGAVKPATTFILAPVWGLLADQLQNPFLILQLTFLVSLVGQLLLACRDDAKFIMAMVFVTALFNAPVKSLLDSMVLDHIPDKTQYGRLRLWGQMGFGLGSSLVGVLLSKSKQIHFRDTTTHPELEVWLAEQFSSSYVRQAIRFLDKFWQSLTGYKLLFFTYAALSLPTWLCIQAFRRLDLQQQQEEKAQKALISEALAKTRKKDKTPTRQKTEIASTAPNATLQGLSLLFHNTDVLFFFFLVLVVGISSGVIENFAYVRLREVGGTGKEMGLSRLVSSLAGAPMFWFSGRLSEALGVDRVFVLSLLSYVAR 331          
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Match: A0A7S3VB90_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VB90_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.530e-51
Identity = 121/358 (33.80%), Postives = 176/358 (49.16%), Query Frame = 1
Query:   34 LAVKAVFFLFYSSLGAIMPYLPVYYHSLALPDRQIGHLGAITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAWIVSFIALTAIVNAPVRPLLDSSALQTLDD--RGEYGKQRLWGQWGFGIGSFLTGRLLSRF---------------------------------------------------------------GFKAAFYMHAAFSIPTLLILLRFT----------PRKEDRT--------KGPP--RFGELYRLMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVSSLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR 852
            L +K +F  +Y SLGA+MPYLPVYYHSL    + IG LGA+ P  TF   PLWG ++D +     IL  TF++S  L++ L  + +  ++V+ + LTA+ NAPV+ L+DS  +  LD+  RG+YGK RL+GQ GFGIGS + G L+ R                                                                G+K AF  +   SIP  + +  F            +K+ +         KG    R  +   +++H  D   FF +VF +G +SG+IENFAY R+RE+G +G  +GI RL SS+AG PMF+FSG + +      +L  +++SYI R
Sbjct:  155 LMIKILFITYYGSLGALMPYLPVYYHSLGHSGQSIGLLGAVKPLTTFFVAPLWGIISDYTENPSLILQLTFIMSMGLQLLLPLKDNVNYLVTMVFLTALFNAPVKSLIDSMVMDKLDENSRGQYGKLRLYGQLGFGIGSSIVGTLIGRSTAPTAQSPLASPSPAAEKIIMGAMEVGIEASAAAAASEEITKTAIETLSELVSSSIEKLSRVTGYKLAFVAYGFLSIPAFICMKTFRRLDANESVQIQKKKKKVAKKATVVPKGSSGARIRQGIAMLLHSSDAMVFFFLVFLVGTTSGIIENFAYVRIREVGGTGKEMGICRLTSSMAGAPMFWFSGPLTEKLGADRVLVLSLVSYILR 512          
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Match: A0A1E7F2F5_9STRA (MFS general substrate transporter (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F2F5_9STRA)

HSP 1 Score: 178 bits (452), Expect = 3.260e-50
Identity = 102/273 (37.36%), Postives = 155/273 (56.78%), Query Frame = 1
Query:   34 LAVKAVFFLFYSSLGAIMPYLPVYYHSLALPDRQIGHLGAITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAWIVSFIALTAIVNAPVRPLLDSSALQTLDDRGEYGKQRLWGQWGFGIGSFLTGRLLSRFGFKAAFYMHAAFSIPTLLILLRFTPRKEDRTKGPPRFGELYRLMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVSSLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR 852
            + ++ +FF +Y+SLG+++PYLPVYYHSL    + IG LGAI P  TFL  PLWG ++D+SG   ++L  TFL+S + ++ ++ R   +WI+  + +TA+ NAPV+ LLDS  +  + +   YG+ RLWGQ GFG+GS + G +LS    K+                                      ++V              +G+SSGVIENFAY R+RE+G  G  +G+SRLVSS+AG PMF+FSG + +      +L  ++++Y+ R
Sbjct:    4 ILIRILFFTYYASLGSLLPYLPVYYHSLGHGGQIIGMLGAIKPFTTFLVAPLWGVISDQSGSPFRVLYFTFLISLVGQLLVSWRHDPSWIMYMVFITALFNAPVKSLLDSMVMANIKNSKLYGRLRLWGQLGFGVGSSVVGIILS----KSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLV--------------VGISSGVIENFAYVRIREVGGGGREMGLSRLVSSMAGAPMFWFSGPLTELLGADRVLAFSLINYVVR 258          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10465.639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNX9_ECTSI1.420e-16284.86MFS_1_like domain-containing protein n=2 Tax=Ectoc... [more]
A0A836CD83_9STRA5.700e-10057.86Major facilitator superfamily domain-containing pr... [more]
K8YPX5_NANGC2.980e-9148.43MFS domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A7S4EIB8_9STRA4.670e-6037.13Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
B8BR57_THAPS5.420e-5942.55MFS domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A7S2XSE9_9STRA1.220e-5737.20Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Z5KL90_FISSO6.860e-5737.32MFS domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A1Z5KMM0_FISSO6.110e-5538.07MFS domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A7S3VB90_9STRA2.530e-5133.80Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1E7F2F5_9STRA3.260e-5037.36MFS general substrate transporter (Fragment) n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10465contigP-canaliculata_contig10465:8519..11147 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score482.3
Seed ortholog evalue1.6e-133
Seed eggNOG ortholog2880.D8LNX9
KEGG koko:K11367
EggNOG free text desc.MFS_1 like family
EggNOG OGsKOG3762@1,KOG3762@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03021,ko03036
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionMajor facilitator superfamily
Ec32 orthologEc-08_005410.1
Exons4
Model size855
Cds size855
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10465.639.1prot_P-canaliculata_contig10465.639.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig10465 8519..11147 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815617.088-CDS-P-canaliculata_contig10465:8518..86491622815617.088-CDS-P-canaliculata_contig10465:8518..8649Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10465 8519..8649 +
1693494168.2839303-CDS-P-canaliculata_contig10465:8518..86491693494168.2839303-CDS-P-canaliculata_contig10465:8518..8649Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10465 8519..8649 +
1622815617.0992696-CDS-P-canaliculata_contig10465:9244..95481622815617.0992696-CDS-P-canaliculata_contig10465:9244..9548Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10465 9245..9548 +
1693494168.295552-CDS-P-canaliculata_contig10465:9244..95481693494168.295552-CDS-P-canaliculata_contig10465:9244..9548Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10465 9245..9548 +
1622815617.1101606-CDS-P-canaliculata_contig10465:10178..103701622815617.1101606-CDS-P-canaliculata_contig10465:10178..10370Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10465 10179..10370 +
1693494168.3035655-CDS-P-canaliculata_contig10465:10178..103701693494168.3035655-CDS-P-canaliculata_contig10465:10178..10370Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10465 10179..10370 +
1622815617.1227815-CDS-P-canaliculata_contig10465:10919..111471622815617.1227815-CDS-P-canaliculata_contig10465:10919..11147Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10465 10920..11147 +
1693494168.311892-CDS-P-canaliculata_contig10465:10919..111471693494168.311892-CDS-P-canaliculata_contig10465:10919..11147Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10465 10920..11147 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10465.639.1

>prot_P-canaliculata_contig10465.639.1 ID=prot_P-canaliculata_contig10465.639.1|Name=mRNA_P-canaliculata_contig10465.639.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=285bp
RQRKWKWKPKYLAVKAVFFLFYSSLGAIMPYLPVYYHSLALPDRQIGHLG
AITPAMTFLFTPLWGALTDRSGMLKQILVATFLVSTLLRVSLAARTSFAW
IVSFIALTAIVNAPVRPLLDSSALQTLDDRGEYGKQRLWGQWGFGIGSFL
TGRLLSRFGFKAAFYMHAAFSIPTLLILLRFTPRKEDRTKGPPRFGELYR
LMVHDPDVTAFFSMVFAIGLSSGVIENFAYKRLRELGASGSVLGISRLVS
SLAGIPMFFFSGRIVKNFSIVTILTAAMMSYIAR*
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mRNA from alignment at P-canaliculata_contig10465:8519..11147+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10465.639.1 ID=mRNA_P-canaliculata_contig10465.639.1|Name=mRNA_P-canaliculata_contig10465.639.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2629bp|location=Sequence derived from alignment at P-canaliculata_contig10465:8519..11147+ (Pelvetia canaliculata dioecious)
CGGCAGCGAAAGTGGAAGTGGAAGCCCAAGTACTTGGCAGTGAAGGCGGT GTTCTTCTTGTTTTACAGCAGCCTCGGAGCGATCATGCCCTACCTGCCCG TATATTACCACTCCCTGGCCCTTCCGGACCGGTGAGCAAGCGAGGGGCGC GGAGAAAACAAGGCGGGCGGATGAGGCTACGTGGGGCGTTACGATTGATG ACTAATTATTGTTTTACGTACGTCGCGGGCGCGGGAGGGAACGGGAGGGG GGGGGCGGAGGATGGTATCGTTATCATGACAGTACCTTTTTGCTCCCCTC GTAGGTTTCGCTTATTGTTCGTGTTATACCTATAATAGTACTTTTAATCG CTCGATTAGGACAACAGTGGTGGGGGAGAGAGAGGGAAACCTGGTGATGA TGCAGCTACTTCTAAATCCGTTGTATTCGGTATCTCGACGCAGCGAAGAA GTGACTTGTGCGTTGTTCTTATATATCCCACTTGTTCCGTGTTGGCGTTG TGTACCGCTCGAGATAAACGTATGTGCGGCAGACGGTCGCCCGAGGCATT TCTACCAGGCGAAAGGGTAGCGAATTTTGCACAAGAGGAAATAGGGTGAC GGCATGCATGCACCTTACCTTGCTCGCGCGCCCCGGCCCGCTCCCAGAGC ATCATCTCCCGTATCCCCAGTCCCCTCCCTCCACGACGCGTAAAACACGC CTCCATTCTCCTTCCGTGTGCGGCAGGCAAATAGGGCACCTCGGTGCCAT CACCCCGGCGATGACCTTTCTGTTCACGCCGCTGTGGGGAGCCCTCACGG ACCGATCGGGAATGCTGAAGCAGATCCTGGTTGCCACGTTCCTGGTGTCG ACACTTCTCAGGGTCTCCCTCGCCGCGCGCACTTCCTTCGCGTGGATCGT ATCCTTCATCGCCCTCACGGCGATCGTGAACGCTCCCGTCCGGCCGCTCC TGGACAGCAGCGCTCTGCAGACGCTGGACGACAGGGGCGAGTACGGGAAG CAGAGGCTTTGGGGACAATGGGGTTTCGGGGTGAGAAAATGGCGTGAAAA CACTGGAGTACTAACGGGGAGAAAGGGCCGAGAACAAGGCGTTTGCCTAG AGAGGGATATCCAAGAGTTATTCGAGCTGAGGTACTGAATACGCATGGAA TGAATGTGTTGAGAGAAAGGGGGATGAAGAAACAACGGGTTTGGATGAGG ATGCCCGAGAGGGGAGAGAAGAGGAGAGATTTCAAGCAGATTTTATTTAA CGTCCAAGTAAACGATTGTATATTCTTAGGCCAGGGTCTAGTGCACAGCT CACCCGGAGCAGCAGCGTGATGGCCTTACCCCTTCCTTTACACTCGCCCA ATTCATGGAGGGAAATTTCCGAGAACTCAGATGGCGTAAGAGTGAAATAC CCCCTCGGTTATTTTTCCCATGTCGCCCACTCCATGGCAAAAAAAATACA AAGTAGGAGGAGGCTCTTGTACGGCGTGGGCAAAAATCATCCTAGGCTTT GGTCGTGCATCGTCCATTCCAAGACATTACACCTTCACGAGAAAAAAATT GTTGGGCCGGCCCTAGAGAAGGTGTGAATTTTCCTGGAACAATCCTCGCG ACTGTTTCTGCGTCGTTCTGGGCAACGCCCATCTTCTCTCGCGCGCACGC GCTTGGCCAGATCGGGTCGTTCTTAACGGGGCGGCTGCTCTCCAGGTTCG GGTTCAAGGCAGCGTTCTACATGCACGCGGCGTTCTCAATCCCAACCCTT CTGATCCTGTTGCGCTTCACCCCCCGGAAGGAGGATCGGACGAAGGGCCC CCCCAGGTTCGGAGAGCTTTACAGGCTCATGGTGCACGACCCGGACGTTA CGGTGAGAGCTCGGATTCCGACTCCATGGATTAATTATATGTGATGGCCA TACACATCTCGGCCGTCGGTCGTTTCGGTTAGATCCTATTTAGTTCGTTG TTCATCGTTGACTCCTTTGCTGCGCTGCTGCTGAGACTATGATGGAGAAA TATATATATATATATATGAGAGACAAGGGTGGAATGGCGTGTTTCAATTG GAGAGAGAGAGTGTGTGTGTGGAGGGGGGTCCCCATGCCTGCTTCCGCCC GTCCTGCCTACCTTTTTGCCTGCCTGCCAAAAGGCTGCGACGTCGAGGTC TGACGTTGCGGACCCCCAATGCGTGCTGCTTTACAGCACTGCTACAATTG ATACTCGAGTATTCTATATACCTGGTATTTCCTGACAATTTTGTTGGTCA AAAGCGTGGCCGTCCGGCCGAGACCGTGGGTGCCATGTTTATGCCACGGG TGTGTCCCCTTGATTTTCAGCAAATCAAACTGATTATGCAGAGTCCCCCC CCCTTCTCACCGCCACTAAACGTGGTGCCGTGAACTGAAACCCCTGTGAA GGCGTTCTTCTCCATGGTGTTCGCCATCGGGCTCTCTAGCGGTGTCATCG AGAACTTTGCTTACAAGCGACTCCGCGAGCTGGGGGCATCCGGTTCGGTG CTAGGGATTTCTCGGCTGGTGTCCAGCTTGGCGGGCATCCCCATGTTCTT TTTCTCCGGAAGGATTGTGAAGAACTTCTCGATCGTTACGATCCTCACGG CGGCGATGATGAGCTATATCGCCCGGTAG
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Coding sequence (CDS) from alignment at P-canaliculata_contig10465:8519..11147+

>mRNA_P-canaliculata_contig10465.639.1 ID=mRNA_P-canaliculata_contig10465.639.1|Name=mRNA_P-canaliculata_contig10465.639.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1710bp|location=Sequence derived from alignment at P-canaliculata_contig10465:8519..11147+ (Pelvetia canaliculata dioecious)
CGGCAGCGAAAGTGGAAGTGGAAGCCCAAGTACTTGGCAGTGAAGGCGGT
GTTCTTCTTGTTTTACAGCAGCCTCGGAGCGATCATGCCCTACCTGCCCG
TATATTACCACTCCCTGGCCCTTCCGGACCGCGGCAGCGAAAGTGGAAGT
GGAAGCCCAAGTACTTGGCAGTGAAGGCGGTGTTCTTCTTGTTTTACAGC
AGCCTCGGAGCGATCATGCCCTACCTGCCCGTATATTACCACTCCCTGGC
CCTTCCGGACCGGCAAATAGGGCACCTCGGTGCCATCACCCCGGCGATGA
CCTTTCTGTTCACGCCGCTGTGGGGAGCCCTCACGGACCGATCGGGAATG
CTGAAGCAGATCCTGGTTGCCACGTTCCTGGTGTCGACACTTCTCAGGGT
CTCCCTCGCCGCGCGCACTTCCTTCGCGTGGATCGTATCCTTCATCGCCC
TCACGGCGATCGTGAACGCTCCCGTCCGGCCGCTCCTGGACAGCAGCGCT
CTGCAGACGCTGGACGACAGGGGCGAGTACGGGAAGCAGAGGCTTTGGGG
ACAATGGGGTTTCGGGGCAAATAGGGCACCTCGGTGCCATCACCCCGGCG
ATGACCTTTCTGTTCACGCCGCTGTGGGGAGCCCTCACGGACCGATCGGG
AATGCTGAAGCAGATCCTGGTTGCCACGTTCCTGGTGTCGACACTTCTCA
GGGTCTCCCTCGCCGCGCGCACTTCCTTCGCGTGGATCGTATCCTTCATC
GCCCTCACGGCGATCGTGAACGCTCCCGTCCGGCCGCTCCTGGACAGCAG
CGCTCTGCAGACGCTGGACGACAGGGGCGAGTACGGGAAGCAGAGGCTTT
GGGGACAATGGGGTTTCGGGATCGGGTCGTTCTTAACGGGGCGGCTGCTC
TCCAGGTTCGGGTTCAAGGCAGCGTTCTACATGCACGCGGCGTTCTCAAT
CCCAACCCTTCTGATCCTGTTGCGCTTCACCCCCCGGAAGGAGGATCGGA
CGAAGGGCCCCCCCAGGTTCGGAGAGCTTTACAGGCTCATGGTGCACGAC
CCGGACGTTACGATCGGGTCGTTCTTAACGGGGCGGCTGCTCTCCAGGTT
CGGGTTCAAGGCAGCGTTCTACATGCACGCGGCGTTCTCAATCCCAACCC
TTCTGATCCTGTTGCGCTTCACCCCCCGGAAGGAGGATCGGACGAAGGGC
CCCCCCAGGTTCGGAGAGCTTTACAGGCTCATGGTGCACGACCCGGACGT
TACGGCGTTCTTCTCCATGGTGTTCGCCATCGGGCTCTCTAGCGGTGTCA
TCGAGAACTTTGCTTACAAGCGACTCCGCGAGCTGGGGGCATCCGGTTCG
GTGCTAGGGATTTCTCGGCTGGTGTCCAGCTTGGCGGGCATCCCCATGTT
CTTTTTCTCCGGAAGGATTGTGAAGAACTTCTCGATCGTTACGATCCTCA
CGGCGGCGATGATGAGCTATATCGCCCGGTAGGCGTTCTTCTCCATGGTG
TTCGCCATCGGGCTCTCTAGCGGTGTCATCGAGAACTTTGCTTACAAGCG
ACTCCGCGAGCTGGGGGCATCCGGTTCGGTGCTAGGGATTTCTCGGCTGG
TGTCCAGCTTGGCGGGCATCCCCATGTTCTTTTTCTCCGGAAGGATTGTG
AAGAACTTCTCGATCGTTACGATCCTCACGGCGGCGATGATGAGCTATAT
CGCCCGGTAG
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