mRNA_P-canaliculata_contig104640.637.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig104640.637.1
Unique NamemRNA_P-canaliculata_contig104640.637.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
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BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Match: UPI001673AF69 (ABC transporter ATP-binding protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI001673AF69)

HSP 1 Score: 366 bits (939), Expect = 6.700e-127
Identity = 186/205 (90.73%), Postives = 196/205 (95.61%), Query Frame = 1 
Query:    1 MARPVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQKEFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAALIATHN 615
            MARP+LSVRNLHR+YPSGGG LTVMAGADIDIYPGEMVGL+GPSGSGKSTLLHAAGLLEKPNAGEV+INGRE LKL D+ RTRIRRES+GVVYQFHHLQKEFTALENVAIPQMIAGVS K AEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALAN+PQ+LLGDEPTGNLDPATSD VFRSL DLTR+EGV+ LIATHN
Sbjct:    1 MARPILSVRNLHRSYPSGGGILTVMAGADIDIYPGEMVGLVGPSGSGKSTLLHAAGLLEKPNAGEVYINGRECLKLSDDIRTRIRRESIGVVYQFHHLQKEFTALENVAIPQMIAGVSAKVAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANKPQLLLGDEPTGNLDPATSDVVFRSLFDLTRSEGVSTLIATHN 205
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BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Match: A0A8J3CPM7_9PROT (Lipoprotein-releasing system ATP-binding protein LolD 2 n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CPM7_9PROT)

HSP 1 Score: 328 bits (841), Expect = 5.270e-112
Identity = 169/205 (82.44%), Postives = 180/205 (87.80%), Query Frame = 1 
Query:    1 MARPVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQKEFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAALIATHN 615
            M RPVLSVRNLHR+Y SGGG L V+AGADIDI+PGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRE LKLPD+ERT IRRE +G+VYQFHHLQKEFTA ENV IPQMIAG + + A AE+ RLL  MGL ERLTHRPSQMSGGEQQRVAIARALANRPQ+LL DEPTGNLDPATS  VF  L  LTR EGVAAL+ATHN
Sbjct:    1 MTRPVLSVRNLHRSYKSGGGLLKVLAGADIDIFPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRECLKLPDDERTAIRRERIGMVYQFHHLQKEFTAEENVMIPQMIAGKTSRIARAESRRLLVAMGLGERLTHRPSQMSGGEQQRVAIARALANRPQVLLSDEPTGNLDPATSAVVFDQLYQLTRQEGVAALVATHN 205
[Close]
BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Match: UPI0004792266 (ABC transporter ATP-binding protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0004792266)

HSP 1 Score: 325 bits (832), Expect = 1.150e-110
Identity = 165/203 (81.28%), Postives = 182/203 (89.66%), Query Frame = 1 
Query:    7 RPVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQKEFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAALIATHN 615
            RP+LSVRNLHR+Y SG   L VM GADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRE LKLPD++RT IRRE++GVVYQFHHLQKEF+AL+NVAIPQMIAG S K AEAEAARLL  MGL+ER  H+PSQMSGGEQQRVAIARA+AN+PQ+LL DEPTGNLDP TS +VF+SL DLTR E V+AL+ATHN
Sbjct:    6 RPILSVRNLHRSYQSGPKALHVMMGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRECLKLPDDQRTAIRRETIGVVYQFHHLQKEFSALDNVAIPQMIAGKSHKLAEAEAARLLGIMGLSERSHHKPSQMSGGEQQRVAIARAIANKPQVLLADEPTGNLDPTTSGNVFQSLFDLTRLESVSALVATHN 208
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BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Match: A0A848V597_9PROT (ABC transporter ATP-binding protein n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V597_9PROT)

HSP 1 Score: 322 bits (826), Expect = 9.130e-110
Identity = 162/203 (79.80%), Postives = 181/203 (89.16%), Query Frame = 1 
Query:    7 RPVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQKEFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAALIATHN 615
            RP+LSVRNLHR Y SGGG L V+ GADID+YPGEMVGL+GPSGSGKSTLLHAAGLLEKPNAGEVFING+ESL+L D+ RT IRR S+G+VYQFHHL KEFTAL+NV IPQ+IAG S   AE EAARLL+ MGLAER+THRPSQMSGGEQQRVAIARA+AN PQ+LLGDEPTGNLDPATS SVF++L++L R E VAALIATHN
Sbjct:    5 RPILSVRNLHRNYKSGGGVLHVLKGADIDVYPGEMVGLVGPSGSGKSTLLHAAGLLEKPNAGEVFINGKESLRLSDDRRTAIRRRSIGMVYQFHHLLKEFTALDNVVIPQLIAGRSKAYAEREAARLLTEMGLAERMTHRPSQMSGGEQQRVAIARAIANNPQVLLGDEPTGNLDPATSASVFQALMNLVRQEKVAALIATHN 207
[Close]
BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Match: A0A420WKX4_9PROT (Lipoprotein-releasing system ATP-binding protein n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WKX4_9PROT)

HSP 1 Score: 319 bits (817), Expect = 2.460e-108
Identity = 162/203 (79.80%), Postives = 182/203 (89.66%), Query Frame = 1 
Query:    7 RPVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQKEFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAALIATHN 615
            RP+LSVRNLHR+Y SG  TLTV+AGADIDI+PGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEV+INGRE LKL D++RT IRRE++GVVYQFHHLQKEFTA ENV IPQMI+G S K++  EA RLL+ MGL  R+ H+PS+MSGGEQQRVAIARALAN+PQILL DEPTGNLDPATS SVF+SL DLTR EGV+AL+ATHN
Sbjct:    5 RPILSVRNLHRSYQSGPKTLTVLAGADIDIFPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVYINGRECLKLSDDKRTAIRRETIGVVYQFHHLQKEFTAEENVVIPQMISGKSEKQSLIEAQRLLTVMGLEPRMHHKPSEMSGGEQQRVAIARALANKPQILLADEPTGNLDPATSSSVFKSLFDLTRMEGVSALVATHN 207
[Close]
BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Match: A0A2G2MP50_9PROT (ABC transporter n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2MP50_9PROT)

HSP 1 Score: 303 bits (776), Expect = 3.730e-102
Identity = 150/202 (74.26%), Postives = 174/202 (86.14%), Query Frame = 1 
Query:   10 PVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQKEFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAALIATHN 615
            P+LS+RNLHR++ SG   L V+AGAD+DIYPGEMVGL+GPSGSGKSTLLHAAGLLEKPNAGEV+ING+E L L D +RT IRR  +GVVYQFHHL +EFTAL+NVA+PQMIAG S   A  EA RLL  MGLAER+ H+PSQMSGGEQQRVAIARA+AN+P+ILL DEPTGNLDP TS +VF+SL D+TR EGV+AL+ATHN
Sbjct:    5 PILSIRNLHRSFKSGDSVLNVLAGADLDIYPGEMVGLVGPSGSGKSTLLHAAGLLEKPNAGEVYINGKECLSLSDNKRTAIRRNQIGVVYQFHHLLREFTALDNVALPQMIAGKSQSAARKEAERLLGVMGLAERMHHQPSQMSGGEQQRVAIARAIANKPKILLADEPTGNLDPNTSGNVFQSLFDMTRLEGVSALVATHN 206
[Close]
BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Match: A0A2G2GJ43_9PROT (ABC transporter n=2 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GJ43_9PROT)

HSP 1 Score: 300 bits (768), Expect = 7.560e-101
Identity = 150/203 (73.89%), Postives = 175/203 (86.21%), Query Frame = 1 
Query:    7 RPVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQKEFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAALIATHN 615
            +P+LS+RNLHR++ SG  TLTV+ GAD+DIYPGEMVGL+G SGSGKSTLLHAAGLLEKPNAGEV+I GRE L L D ERT IRR S+GVVYQFHHL +EF A++NVA+PQMIAG S K A AEA RLL  MGL++R+ H+P +MSGGEQQRVAIARA+AN+P+ILL DEPTGNLDP TS +VF+SL DLTR EGVAAL+ATHN
Sbjct:    6 QPILSIRNLHRSFKSGDTTLTVLNGADLDIYPGEMVGLVGQSGSGKSTLLHAAGLLEKPNAGEVYIGGRECLSLSDNERTAIRRNSIGVVYQFHHLLREFDAVDNVALPQMIAGKSEKAARAEAQRLLGIMGLSDRMHHQPGKMSGGEQQRVAIARAIANKPKILLADEPTGNLDPNTSGNVFQSLFDLTRLEGVAALVATHN 208
[Close]
BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Match: A0A7C5QV48_9PROT (ABC transporter ATP-binding protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7C5QV48_9PROT)

HSP 1 Score: 300 bits (767), Expect = 1.000e-100
Identity = 150/202 (74.26%), Postives = 175/202 (86.63%), Query Frame = 1 
Query:   10 PVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQKEFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAALIATHN 615
            PVLSVRNLHR++ SG   LTV+AGA+IDIYPGEMVGL+GPSGSGKSTLLHAAGLLEKPNAGEV+I+G+E L L D  RT IRR ++GVVYQFHHL +EFTAL+NVA+PQMIAG S   +  EA RLL  MGL+ER+ H+PS+MSGGEQQRVAIARA+ANRP++LL DEPTGNLDP TS +VF+SL DLTR EGV+AL+ATHN
Sbjct:    6 PVLSVRNLHRSFQSGDSVLTVLAGANIDIYPGEMVGLVGPSGSGKSTLLHAAGLLEKPNAGEVYIHGKECLSLSDNARTAIRRNNIGVVYQFHHLLREFTALDNVALPQMIAGKSQSASRKEAERLLGIMGLSERMHHQPSKMSGGEQQRVAIARAIANRPKLLLADEPTGNLDPNTSGNVFQSLFDLTRLEGVSALVATHN 207
[Close]
BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Match: A0A7Y1X6V6_9PROT (ABC transporter ATP-binding protein n=1 Tax=Hyphomonadaceae bacterium TaxID=2026748 RepID=A0A7Y1X6V6_9PROT)

HSP 1 Score: 297 bits (760), Expect = 1.160e-99
Identity = 150/202 (74.26%), Postives = 172/202 (85.15%), Query Frame = 1 
Query:   10 PVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQKEFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAALIATHN 615
            P+LS RN+HR++ SG   L V+ GA+IDIYPGEMVGL+GPSGSGKSTLLHAAGLLEKPNAGEV+I GRE L L D ERT IRR S+GVVYQFHHL +EFTAL+NVA+PQMIAG S  +A AEA RLL  MGL+ER  H+PSQMSGGEQQRVAIARA+AN+P+ILL DEPTGNLDP TS +VF+SL D TR EGV+AL+ATHN
Sbjct:    6 PILSARNIHRSFKSGDTVLDVLVGANIDIYPGEMVGLVGPSGSGKSTLLHAAGLLEKPNAGEVWIGGRECLSLSDNERTAIRRNSIGVVYQFHHLLREFTALDNVALPQMIAGKSQSEARAEANRLLGIMGLSERTHHQPSQMSGGEQQRVAIARAIANKPKILLADEPTGNLDPNTSGNVFQSLFDSTRLEGVSALVATHN 207
[Close]
BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Match: A0A2G2R0W6_9PROT (ABC transporter n=2 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2R0W6_9PROT)

HSP 1 Score: 289 bits (740), Expect = 1.420e-96
Identity = 145/203 (71.43%), Postives = 170/203 (83.74%), Query Frame = 1 
Query:    7 RPVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKSTLLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQKEFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGEQQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAALIATHN 615
            +P+LSVRNLHR++ SG   L V+ GA+IDIYPGEMVGL+GPSGSGKSTLLHAAGLLE P+ GEV+I G E L L D +RT IRR  +GVVYQFHHL +EFTAL+NVA+PQMIAG S   A  EA RLL  MGL++R+ H+PSQMSGGEQQRVAIARA+AN+P+ILL DEPTGNLDP TS +VF+SL D+TR EGVAAL+ATHN
Sbjct:    8 QPILSVRNLHRSFQSGDNILHVLTGAEIDIYPGEMVGLVGPSGSGKSTLLHAAGLLETPDXGEVYIGGTECLSLSDNKRTAIRRNEIGVVYQFHHLLREFTALDNVALPQMIAGKSQSGARXEAERLLGIMGLSDRMHHQPSQMSGGEQQRVAIARAIANKPKILLADEPTGNLDPNTSGNVFQSLFDMTRLEGVAALVATHN 210
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig104640.637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001673AF696.700e-12790.73ABC transporter ATP-binding protein n=1 Tax=Litori... [more]
A0A8J3CPM7_9PROT5.270e-11282.44Lipoprotein-releasing system ATP-binding protein L... [more]
UPI00047922661.150e-11081.28ABC transporter ATP-binding protein n=1 Tax=Hellea... [more]
A0A848V597_9PROT9.130e-11079.80ABC transporter ATP-binding protein n=1 Tax=Hellea... [more]
A0A420WKX4_9PROT2.460e-10879.80Lipoprotein-releasing system ATP-binding protein n... [more]
A0A2G2MP50_9PROT3.730e-10274.26ABC transporter n=1 Tax=Robiginitomaculum sp. TaxI... [more]
A0A2G2GJ43_9PROT7.560e-10173.89ABC transporter n=2 Tax=Robiginitomaculum sp. TaxI... [more]
A0A7C5QV48_9PROT1.000e-10074.26ABC transporter ATP-binding protein n=1 Tax=Hellea... [more]
A0A7Y1X6V6_9PROT1.160e-9974.26ABC transporter ATP-binding protein n=1 Tax=Hyphom... [more]
A0A2G2R0W6_9PROT1.420e-9671.43ABC transporter n=2 Tax=Robiginitomaculum sp. TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig104640contigP-canaliculata_contig104640:2..616 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score326.6
Seed ortholog evalue8.1e-87
Seed eggNOG ortholog1121948.AUAC01000003_gene2836
Preferred namelolD
KEGG koko:K09810
KEGG TC3.A.1.125
KEGG Pathwayko02010,map02010
KEGG ModuleM00255
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006807,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0015031,GO:0015399,GO:0015405,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042157,GO:0042160,GO:0042623,GO:0042626,GO:0042886,GO:0042953,GO:0043167,GO:0043168,GO:0043170,GO:0043190,GO:0043492,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0045184,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1902495,GO:1904949,GO:1990351,GO:1990778
EggNOG free text desc.Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner
EggNOG OGs1MVSQ@1224,2TSBE@28211,43WQM@69657,COG1136@1,COG1136@2
COG Functional cat.V
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Exons1
Model size615
Cds size615
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815617.0175552-CDS-P-canaliculata_contig104640:1..6161622815617.0175552-CDS-P-canaliculata_contig104640:1..616Pelvetia canaliculata dioeciousCDSP-canaliculata_contig104640 2..616 -
1693494168.2577193-CDS-P-canaliculata_contig104640:1..6161693494168.2577193-CDS-P-canaliculata_contig104640:1..616Pelvetia canaliculata dioeciousCDSP-canaliculata_contig104640 2..616 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig104640.637.1prot_P-canaliculata_contig104640.637.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig104640 2..616 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig104640.637.1

>prot_P-canaliculata_contig104640.637.1 ID=prot_P-canaliculata_contig104640.637.1|Name=mRNA_P-canaliculata_contig104640.637.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=205bp
MARPVLSVRNLHRTYPSGGGTLTVMAGADIDIYPGEMVGLIGPSGSGKST
LLHAAGLLEKPNAGEVFINGRESLKLPDEERTRIRRESVGVVYQFHHLQK
EFTALENVAIPQMIAGVSGKKAEAEAARLLSNMGLAERLTHRPSQMSGGE
QQRVAIARALANRPQILLGDEPTGNLDPATSDSVFRSLLDLTRTEGVAAL
IATHN
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mRNA from alignment at P-canaliculata_contig104640:2..616-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig104640.637.1 ID=mRNA_P-canaliculata_contig104640.637.1|Name=mRNA_P-canaliculata_contig104640.637.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=615bp|location=Sequence derived from alignment at P-canaliculata_contig104640:2..616- (Pelvetia canaliculata dioecious)
ATGGCGCGTCCTGTTCTTTCCGTCCGTAATCTTCACCGCACCTATCCGTC
CGGCGGCGGCACGCTCACCGTTATGGCGGGCGCGGATATTGATATTTATC
CCGGAGAGATGGTTGGCCTCATCGGGCCATCCGGGTCGGGGAAATCGACC
TTGCTCCATGCGGCAGGTCTCCTCGAAAAACCCAATGCGGGCGAAGTGTT
TATCAATGGCCGCGAAAGCCTGAAGCTGCCCGATGAAGAGCGCACGCGCA
TCCGGCGGGAGAGTGTTGGGGTCGTCTATCAATTCCATCATTTGCAGAAA
GAATTCACGGCGCTGGAAAATGTCGCTATCCCGCAAATGATTGCCGGTGT
CTCCGGTAAAAAGGCGGAAGCCGAGGCCGCGCGCCTGCTCAGTAATATGG
GGCTGGCTGAACGCCTAACCCATCGCCCGAGCCAGATGTCCGGCGGTGAG
CAGCAGCGCGTCGCCATTGCCCGCGCGCTGGCCAATCGGCCGCAAATCCT
GCTGGGCGATGAGCCGACAGGCAATCTCGATCCTGCCACATCGGACTCCG
TCTTCCGCAGCCTGCTCGACCTGACTCGCACCGAGGGCGTGGCGGCTCTT
ATCGCGACGCACAAC
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Coding sequence (CDS) from alignment at P-canaliculata_contig104640:2..616-

>mRNA_P-canaliculata_contig104640.637.1 ID=mRNA_P-canaliculata_contig104640.637.1|Name=mRNA_P-canaliculata_contig104640.637.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1230bp|location=Sequence derived from alignment at P-canaliculata_contig104640:2..616- (Pelvetia canaliculata dioecious)
ATGGCGCGTCCTGTTCTTTCCGTCCGTAATCTTCACCGCACCTATCCGTC
CGGCGGCGGCACGCTCACCGTTATGGCGGGCGCGGATATTGATATTTATC
CCGGAGAGATGGTTGGCCTCATCGGGCCATCCGGGTCGGGGAAATCGACC
TTGCTCCATGCGGCAGGTCTCCTCGAAAAACCCAATGCGGGCGAAGTGTT
TATCAATGGCCGCGAAAGCCTGAAGCTGCCCGATGAAGAGCGCACGCGCA
TCCGGCGGGAGAGTGTTGGGGTCGTCTATCAATTCCATCATTTGCAGAAA
GAATTCACGGCGCTGGAAAATGTCGCTATCCCGCAAATGATTGCCGGTGT
CTCCGGTAAAAAGGCGGAAGCCGAGGCCGCGCGCCTGCTCAGTAATATGG
GGCTGGCTGAACGCCTAACCCATCGCCCGAGCCAGATGTCCGGCGGTGAG
CAGCAGCGCGTCGCCATTGCCCGCGCGCTGGCCAATCGGCCGCAAATCCT
GCTGGGCGATGAGCCGACAGGCAATCTCGATCCTGCCACATCGGACTCCG
TCTTCCGCAGCCTGCTCGACCTGACTCGCACCGAGGGCGTGGCGGCTCTT
ATCGCGACGCACAACATGGCGCGTCCTGTTCTTTCCGTCCGTAATCTTCA
CCGCACCTATCCGTCCGGCGGCGGCACGCTCACCGTTATGGCGGGCGCGG
ATATTGATATTTATCCCGGAGAGATGGTTGGCCTCATCGGGCCATCCGGG
TCGGGGAAATCGACCTTGCTCCATGCGGCAGGTCTCCTCGAAAAACCCAA
TGCGGGCGAAGTGTTTATCAATGGCCGCGAAAGCCTGAAGCTGCCCGATG
AAGAGCGCACGCGCATCCGGCGGGAGAGTGTTGGGGTCGTCTATCAATTC
CATCATTTGCAGAAAGAATTCACGGCGCTGGAAAATGTCGCTATCCCGCA
AATGATTGCCGGTGTCTCCGGTAAAAAGGCGGAAGCCGAGGCCGCGCGCC
TGCTCAGTAATATGGGGCTGGCTGAACGCCTAACCCATCGCCCGAGCCAG
ATGTCCGGCGGTGAGCAGCAGCGCGTCGCCATTGCCCGCGCGCTGGCCAA
TCGGCCGCAAATCCTGCTGGGCGATGAGCCGACAGGCAATCTCGATCCTG
CCACATCGGACTCCGTCTTCCGCAGCCTGCTCGACCTGACTCGCACCGAG
GGCGTGGCGGCTCTTATCGCGACGCACAAC
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