mRNA_P-canaliculata_contig10448.615.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 563 bits (1451), Expect = 1.610e-187 Identity = 288/455 (63.30%), Postives = 341/455 (74.95%), Query Frame = 2
Query: 200 EDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTSNKSPQDDYKDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYPTIANXXXXXXXXXXXIASKRCNDLKIYDNEVYNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP-DASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITDNTFTGTSLLEFKDAQDTVWSSNTFKDADSDLCYKNFKS--------STFASADETLPPL 1537
E GC T+TDLY R+ESDG + KGPI+ LDD+ + + +P ++ KWLLT++L + G++FYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDT NK+PQ Y GRSF+NCVSE + E C GQ QN+ GECRMDII SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYG QGGVW NN+MHDNHQYGFDPHDDSDY T IASKRCN+++IY+NEVY+GG A GIFLHRSSD V+DNVVHDMQDAGMA++ES +ADI++N F++VK+GIR+SLG N+V++N+F+ S GLYTYQGSD P D SDGRPSDN F +N I N G+KI E DDTVITDN FTGTS LEF DAQ+T W NT +C KN S STF LP L
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSI------------IASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHSDDGIDIELSTFDRRTAGLPTL 521
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 545 bits (1403), Expect = 2.550e-175 Identity = 271/476 (56.93%), Postives = 338/476 (71.01%), Query Frame = 2
Query: 113 IMTIPDSCTGTKS--STRWSSGTGLNGRMYLEDGGCGTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTSNKSPQDDYKDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYPTIANXXXXXXXXXXXIASKRCNDLKIYDNEVYNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITDNTFTGTSLLEFKDAQDTVWSSNTFKDADSDLCYKNFKSSTFASADETLP 1531
+M I SC + S R+++ +G+ GR+Y E GC TMTDLY R E+DG + KGP+Y+LDD+ + P+ +T WLL ++L++ G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDT NK PQ+ Y++GRSF+NCVSE + + CEG +N+ GECRMDII SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDY TIA IASKRCN++KI++NEV +GG+ A GIFLHRSSD V+DN + +MQDAG+A++ESFDA I+ N KYGIR+SLG GNN VY N F S+YGLYTY+GSD PD S DGRPS N N + + G+KI E DD NTF EF ++ +T+WS N D C + AS +++P
Sbjct: 414 LMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG----CIEEDDEFDAASGSDSIP 883
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 525 bits (1352), Expect = 1.350e-173 Identity = 271/465 (58.28%), Postives = 335/465 (72.04%), Query Frame = 2
Query: 200 EDGGCGTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTSNKSPQDDYKDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYPTIANXXXXXXXXXXXIASKRCNDLKIYDNEVYNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITDNTFTGTSLLEFKDAQDTVWSSNTFKDADSDLCYKNFKSSTFASADETLPPLC*FSSYSGL 1564
E GC T+TDLY R E+DG + KGP+Y+LD + + +PTSVT KWLL ++L+V G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDT NK PQ+ Y+ GRSF+NCVSE + ETC+G +ND GECRMDII SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYG QGGVWTNN+MHDNHQY +AN IASKRCN++KIYDN+V +GG AVGIFLHRSSD+ EVY N + +M DAG+A++ESF+ADIHDN V++GIR+SLG G N+VYDN F+ CS +GLYTY GSD PD S+ GRP+ N+F +N ++N+ G+K +D+ V+T+N FTGT LEF DAQ T WS N+ S +C N S ++PP FSS SG+
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLP---SGVCIDNITSDD----GNSVPPST-FSSSSGV 460
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 507 bits (1305), Expect = 7.410e-167 Identity = 251/448 (56.03%), Postives = 318/448 (70.98%), Query Frame = 2
Query: 200 EDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTSNKSPQDDYKDGRSFINCVSEY-ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYPTIANXXXXXXXXXXXIASKRCNDLKIYDNEVYNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITDNTFTGTSLLEFKDAQDTVWSSNTFKDADSDLCYKNFKSSTFASADETLPPLC 1540
+ GGC T++DLY + + KGP+++LD ND + + T+ TGKWLLT+DLFV G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE+T+VTSWD + PQ+ YKDGRSFI CVSE ++TC N+ GECRMDII SEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+G QGGVWTNN MHDNHQYGFDPHDDSDY IA IASKRCN++KIYDNEVY+GG+ A GIFLHRS D EVY N + +M DAG+A++E+ DIHDN ++GIR+ LG NN V+DNVF G++TY GSD P GRP DN FY+NTI TETG+KI E+D+ IT+N F+GT+ +EF +A D VWS N+ ++ C ++ +++ + LP C
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIP---TNTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 450 bits (1158), Expect = 2.260e-146 Identity = 218/348 (62.64%), Postives = 263/348 (75.57%), Query Frame = 2
Query: 221 MTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTSNKSPQDDYKDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYPTIANXXXXXXXXXXXIASKRCNDLKIYDNEVYNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSK 1237
MTDLY R E DG + KGP+Y+LDD+ + P+ +T WLL ++L++ G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDT NK PQ+ Y+ GRSF+NCVSE + + CEG +N+ GECRMDII SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDY T IASKRCN++KI++NEV +GG+ AVGIFLHRSSD V+DN + +MQDAG+A++E+FDA I+ NT KYGIR+SLG GNN VY N F S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRI------------IASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 463 bits (1191), Expect = 1.500e-144 Identity = 245/459 (53.38%), Postives = 312/459 (67.97%), Query Frame = 2
Query: 185 GRMYLEDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTSNKSPQDDYKDGRSFINCVSEYESD--ETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYPTIANXXXXXXXXXXXIASKRCNDLKIYDNEVYNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSD--GRPSDNSFYSNTISNTETGMKIAEADDTVITDNTFTGTSLLE---FKDAQDTVWSSNTFKDADSDLCYKNFKSSTFASADETLPPLC 1540
G+ Y+ GGC T+TD+Y ++ G GP+++LD ND+++ S TG WLL D+ V GS+ G GGD LRIQSTGS D++E+RGHGGSL F +T VTSWDT K +YK RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+G GG+WT NKMHDN QYGFDPHDDSD IA IASKRCN++KI+ N VY+GG AVGIFLHRSSD CEV+ N V+DM+DAGMAIMES A IHDNTFTNVKYGIR+S+G N V +N F +C +YG+YTYQG+D P+AS D G DN+F++NT+ E G+KI +A+ V TDN F S E F+D +D VW++N D D+C K K+ + + ++LP LC
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 452 bits (1163), Expect = 3.930e-143 Identity = 238/431 (55.22%), Postives = 302/431 (70.07%), Query Frame = 2
Query: 194 YLEDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTSNKSPQDDYKDGRSFINCVSEYESDET--CEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYPTIANXXXXXXXXXXXIASKRCNDLKIYDNEVYNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDA-SSDGRPSDNSFYSNTISNT--ETGMKIAEADDTVITDNTFTGTSLLEFKDAQDTVWSSNT 1453
Y E GGCGT+T +Y+++ E DG P+Y+LD+N+D++ + TG WLL +L V+ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N ++ DGRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYG QGGVW +N M DN QYGFDPHDDSD TI+N IASKRCN++KI++NEVY+GG AVGIFLHRSSD EV+DNVV++MQDAGMA+MES+DA+I+DN+FTN +YGIR+SLG G N + +N+F ++YGLYTY GSD PD +S+GRPSDN F NTI G+ I E D V DN FTG S EF+D+ DT W NT
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 434 bits (1116), Expect = 5.780e-140 Identity = 244/427 (57.14%), Postives = 293/427 (68.62%), Query Frame = 2
Query: 284 ILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTSNKSPQDDYKDGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYPTIANXXXXXXXXXXXIASKRCNDLKIYDNEVYNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITDNTFTGTSLLEFKDAQDTVWSSNTFKDADSDLCYKNFKSSTFASADETLPPLC*FSSYSGL 1564
+LDD+ + + SPTSVT KWLL S+L+V G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDT NK PQ+ Y+ GRSF+NCVSE + ETC+G+ +ND GECRMDII SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYG QGGVWTNN+MHDNHQYGFDPHDDSDY TIA XXXXXXXXXXX ASKRCN+++IY+NEV +GG +AVGIFLHRSSD+ EVY G DAPD S+ GRP+ N+F +N I+NT G+KI +D+ VI++N FTGT LEF DAQ T WS N+ S +C N S ++PP FSS SG+
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLP---SGVCIDNVTSDD----GNSVPPST-FSSSSGV 363
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 8.710e-126 Identity = 245/519 (47.21%), Postives = 310/519 (59.73%), Query Frame = 2
Query: 47 ALASVLLAALG--SSWDKVVAAD-----DIMTIPDSCTGTKSSTRWSSGTGLNGRMYLED------GGCGTMTDLYKSRVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTSNKSPQDDYKDGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYPTIANXXXXXXXXXXXIASKRCNDLKIYDNEVYNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITDNTF-TGTS---LLEFKDAQDTVWSSNTFKDADSDLCYKNFKSSTF-ASADETLPPLC 1540
A +S LA LG +S AAD D ++ PD + + S R++ G R+YLE GGC T+ +++SR K P+Y +D D+ D+ + T G WLLT +L+V G GT GGD DELR+ ST T + +R HGGSL F T V SWDTS SP +D DGRS+I+ VSE + DETCEG +N GE RMDI SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YG Q G W NKMHDN YGFDPHDDSD+ TI + IASKRCN + I NEVY G + GIFLHRSSD V N VHD DAG+A++ESF+AD+ +NTF N KYG+R+S+G +N +N+ SKY YTY GSD PD S GR +N F N+ S E +KI EAD T DN F G + ++ F DA ++V NT D + D K S F +D P+C
Sbjct: 8 ATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLD-EGDFELKVTNDSCFDGESDSGYEPVC 512
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 5.820e-125 Identity = 227/476 (47.69%), Postives = 288/476 (60.50%), Query Frame = 2
Query: 176 GLNGRMYLED-------GGCGTMTDLYKSRVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTSNKSPQDDYKDGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYPTIANXXXXXXXXXXXIASKRCNDLKIYDNEVYNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITDNTF-TGTS---LLEFKDAQDTVWSSNTFKD-------ADSDLCYKNFKSSTFASADETLPPLC 1540
G R+YLE GGC T+ +++SR KGP+Y +D D+ ++ TS TG WLLT +L+V G G+ GGD DELR+ ST T F +R HGGSL F +T V SWDTS SP +D DGRS+I+ +SE + DETCEG +N GE RMDI SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD NVYG++ +SDIHHM +G+Y+YG Q G W NKMHDN YGFDPHDDSD+ TI + IASKRCN + I NEVY G + GIFLHRSSD V N VHD DAG+A++ESF+AD+ +NTF N KYG+R S+G +N +N ++Y Y+Y G+D PD S GR +N F N+ S E +KI EAD T DN F G + ++ F +A + + NT D D+D C+ AD P+C
Sbjct: 50 GTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDG-------EADSGYEPVC 508 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10448.615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10448.615.1 >prot_P-canaliculata_contig10448.615.1 ID=prot_P-canaliculata_contig10448.615.1|Name=mRNA_P-canaliculata_contig10448.615.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=506bp MARVAPFALASVLLAALGSSWDKVVAADDIMTIPDSCTGTKSSTRWSSGTback to top mRNA from alignment at P-canaliculata_contig10448:2527..7418+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10448.615.1 ID=mRNA_P-canaliculata_contig10448.615.1|Name=mRNA_P-canaliculata_contig10448.615.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=4892bp|location=Sequence derived from alignment at P-canaliculata_contig10448:2527..7418+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10448:2527..7418+ >mRNA_P-canaliculata_contig10448.615.1 ID=mRNA_P-canaliculata_contig10448.615.1|Name=mRNA_P-canaliculata_contig10448.615.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=3036bp|location=Sequence derived from alignment at P-canaliculata_contig10448:2527..7418+ (Pelvetia canaliculata dioecious)back to top |