mRNA_P-canaliculata_contig104379.601.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Match: UPI00167A21C7 (tetratricopeptide repeat protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00167A21C7) HSP 1 Score: 246 bits (627), Expect = 1.820e-79 Identity = 128/182 (70.33%), Postives = 152/182 (83.52%), Query Frame = 1
Query: 1 EKKAQSVSAVYTAADKQLDEGNPDEAVAEFVELGANGPDGYAGLALMRAAAIRHNEGDEITAIKYFDQAAEKFSAPRHKQLAQLKAAYLLAGQGAYSDVIERMTPLAETDAPYEFLARELLGFAYSESGNASSAREQFAYLTSIPGVPPTVKQRAEQSMALMGVKTAITAPEPVEETVPETQ 546
+KKAQ VSAVYTAADK+LD G+ D AV FVELG GPDGYAGL+LMRAAAIR +GD + A++ FDQAAE+F+ PRHKQLAQLKAAYLLA GAYSDVI R+ LA DAPYE L+RELLG+A+SE+G+AS+AREQF++LTS+PGVP TVKQRAEQSMALM KT ++APEP++ ETQ
Sbjct: 50 DKKAQVVSAVYTAADKKLDSGDADAAVQAFVELGETGPDGYAGLSLMRAAAIRQEQGDTMGAVRLFDQAAERFTMPRHKQLAQLKAAYLLADMGAYSDVIGRLATLAVKDAPYEHLSRELLGYAHSEAGDASAAREQFSFLTSVPGVPTTVKQRAEQSMALMNAKTGLSAPEPIDVLQTETQ 231
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Match: UPI0004231EA6 (tetratricopeptide repeat protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0004231EA6) HSP 1 Score: 183 bits (464), Expect = 7.340e-55 Identity = 97/176 (55.11%), Postives = 127/176 (72.16%), Query Frame = 1
Query: 1 EKKAQSVSAVYTAADKQLDEGNPDEAVAEFVELGANGPDGYAGLALMRAAAIRHNEGDEITAIKYFDQAAEKFSAPRHKQLAQLKAAYLLAGQGAYSDVIERMTPLAETDAPYEFLARELLGFAYSESGNASSAREQFAYLTSIPGVPPTVKQRAEQSMALMGVKTA---ITAPEP 519
+K A++ SA Y AA + GN D+++A+F+ + P GYAGL+L+RAAA++ GD A++ D+AA F APRH QLAQ+KAAY+LA GAYSDVI R+ PL E DAPYEFLAREL+GFA +SG+ AREQF YL SIPGVP T+K+RA+Q+++LM A I+APEP
Sbjct: 50 DKSARATSASYVAAANKAAAGNDDDSIADFMAIADEAPAGYAGLSLVRAAALKLEAGDSGEAVRLLDRAASTFEAPRHAQLAQIKAAYILANDGAYSDVINRLGPLIEKDAPYEFLARELMGFAALKSGDEILAREQFGYLESIPGVPATIKERAKQNLSLMRTAAASATISAPEP 225
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Match: A0A420WKN2_9PROT (TPR_21 domain-containing protein n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WKN2_9PROT) HSP 1 Score: 152 bits (383), Expect = 1.810e-42 Identity = 82/173 (47.40%), Postives = 113/173 (65.32%), Query Frame = 1
Query: 10 AQSVSAVYTAADKQLDEGNPDEAVAEFVELGANGPDGYAGLALMRAAAIRHNEGDEITAIKYFDQAAEKFSAPRHKQLAQLKAAYLLAGQGAYSDVIERMTPLAETDAPYEFLARELLGFAYSESGNASSAREQFAYLTSIPGVPPTVKQRAEQSMALMG--VKTAITAPEPV 522
A++ SA Y +A + G D AV F+ L P GY+GL+LMRAA + +G A+ FD+AA +F PRH LA+LKAAY+LA GAY+DV R+ LA DAPYE+LAREL GF +SG+ ++AR++F YL SIPGVP ++ QRA Q ++L+ ++ APEP+
Sbjct: 53 ARAASASYISAAELAQNGEVDRAVDSFLALADKAPAGYSGLSLMRAATLELEQGSRAKAVALFDEAAAQFKLPRHAHLAKLKAAYILADNGAYADVSMRLDSLAAKDAPYEYLARELAGFVAFQSGDMTTARQEFTYLKSIPGVPSSIAQRATQYLSLVPAELEAETVAPEPL 225
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Match: A0A520XIX9_9ACTN (Tetratricopeptide repeat protein n=2 Tax=Bacteria TaxID=2 RepID=A0A520XIX9_9ACTN) HSP 1 Score: 144 bits (364), Expect = 1.250e-39 Identity = 85/182 (46.70%), Postives = 112/182 (61.54%), Query Frame = 1
Query: 7 KAQSVSAVYTAADKQLDEGNPDEAVAEFVELGANGPDGYAGLALMRAAAIRHNEGDEITAIKYFDQAAEKFSAPRHKQLAQLKAAYLLAGQGAYSDVIERMTPLAETDAPYEFLARELLGFAYSESGNASSAREQFAYLTSIPGVPPTVKQRAEQSMALMGVKTAITAPEPVEETVPETQED 552
KA+ SA + AADK DEG+ A+ +F+ L P+GY GL+ RAAA++ GD A+ FD+AA F+ P HK LA LKAAY+L +G Y DV R L+ DAPY LA+ELL A +SG+ +AR QF YL+++PGV VK RAEQS+ LM A+ AP T+ E+ ED
Sbjct: 52 KARKASASFVAADKLADEGDLQAAIDKFLALAEVSPEGYTGLSYSRAAALKVQLGDMDGAVNLFDRAAGAFTKPIHKDLASLKAAYILMDEGRYDDVKARANSLSVDDAPYADLAKELLAHAALQSGDEQTARTQFTYLSNVPGVLNGVKMRAEQSLLLMNASRAVPAP-----TLEESTED 228
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Match: A0A2G1Y612_9PROT (TPR_21 domain-containing protein n=3 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G1Y612_9PROT) HSP 1 Score: 126 bits (316), Expect = 1.500e-32 Identity = 75/165 (45.45%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 10 AQSVSAVYTAADKQLDEGNPDEAVAEFVELGANGPDGYAGLALMRAAAIRHNEGDEITAIKYFDQAAEKFSAPRHKQLAQLKAAYLLAGQGAYSDVIERMTPLAETDAPYEFLARELLGFAYSESGNASSAREQFAYLTSIPGVPPTVKQRAEQSMALMGVKTAI 504
A+S SA Y +A K G+ A+A+FV L PDGYAGL+L RAA ++ GD A+ FDQA EKF P HK LA LKA Y+L QG Y +V R + LA APY LA+E+L A S + SAR QF+YL++ PGV VK R+ ++AL+ +
Sbjct: 53 AKSASAAYMSAGKIEASGDLQAAIAKFVALAEVAPDGYAGLSLTRAAGMKVQLGDLEGAVSLFDQATEKFGKPVHKDLAGLKAVYILLDQGLYDEVQVRASALAVDGAPYADLAKEVLAHAAFNSEDIDSARSQFSYLSNAPGVLSGVKARSGAALALINANRPV 217
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Match: A0A7V5NY22_9PROT (Tetratricopeptide repeat protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7V5NY22_9PROT) HSP 1 Score: 115 bits (287), Expect = 3.090e-28 Identity = 71/169 (42.01%), Postives = 97/169 (57.40%), Query Frame = 1
Query: 4 KKAQSVSAVYTAADKQLDEGNPDEAVAEFVELGANGPDGYAGLALMRAAAIRHNEGDEITAIKYFDQAAEKFSAPRHKQLAQLKAAYLLAGQGAYSDVIERMTPLAETDAPYEFLARELLGFAYSESGNASSAREQFAYLTSIPGVPPTVKQRAEQSMALMGVKTAITA 510
K A++ SA Y AA + EG+ +A A+++ L PDGYAGL+L RAA I G+ A+ DQA +S HK LA LKA Y+L G Y+DV R L + D+PY LA+E+ A +SG AR+ F YL + PGV VK RA Q++AL+ K ++ A
Sbjct: 51 KLAKAASASYMAAARLEKEGDLQKAQAKYLALSKVAPDGYAGLSLERAAGIAVRLGNYDKAVNLLDQAVVHYSDKLHKDLAALKAVYILMDAGRYADVELRAGALVDGDSPYRDLAQEIQAQAEMKSGKIERARKTFTYLANAPGVQAGVKARAGQALALLKAKKSVEA 219
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Match: A0A258CA13_9PROT (TPR_21 domain-containing protein n=1 Tax=Caulobacterales bacterium 32-67-6 TaxID=1970502 RepID=A0A258CA13_9PROT) HSP 1 Score: 109 bits (272), Expect = 5.510e-26 Identity = 65/167 (38.92%), Postives = 89/167 (53.29%), Query Frame = 1
Query: 22 SAVYTAADKQLDEGNPDEAVAEFVELGANGPDGYAGLALMRAAAIRHNEGDEITAIKYFDQAAEKFSAPRHKQLAQLKAAYLLAGQGAYSDVIERMTPLAETDAPYEFLARELLGFAYSESGNASSAREQFAYLTSIPGVPPTVKQRAEQSMALMGVKTAITAPEPV 522
S Y + EG+ +A F E+ A+GP+GYA LALM+ A +R N+GD A+K FD+AAEK S P A+LK+A+ L S++ R+ PL E PY LA E L FA G AR F L +PGV +QRA+ + A++ A P+ V
Sbjct: 57 SQAYAEGVEAFGEGDLKKAEQRFAEVAADGPEGYAALALMQQAGLRVNDGDVEAAVKLFDEAAEKASDPVLADAARLKSAFALLDTAPLSELKTRLEPLTEEGRPYRALALEALAFAKLLGGEMDEARSDFGVLALLPGVSDVARQRAQAARAMIDSGAASALPDVV 223
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Match: A0A6N1VDG4_9HYPH (Tetratricopeptide repeat protein n=1 Tax=Oricola thermophila TaxID=2742145 RepID=A0A6N1VDG4_9HYPH) HSP 1 Score: 87.4 bits (215), Expect = 7.450e-18 Identity = 55/137 (40.15%), Postives = 71/137 (51.82%), Query Frame = 1
Query: 58 EGNPDEAVAEFVELGANGPDGYAGLALMRAAAIRHNEGDEITAIKYFDQAAEKFSAPRH-KQLAQLKAAYLLAGQGAYSDVIERMTPLAETDAPYEFLARELLGFAYSESGNASSAREQFAYLTSIPGVPPTVKQRA 465
EG DEA+AE L A G Y LA MRAA +GD A+ FD A SAP +++A+++AAY+L G+ +DV ER PL+ D P ARE LG A + G AR F + P P +QRA
Sbjct: 71 EGKADEALAELRALEAEGYGAYPVLARMRAATALQEKGDVEGAVAAFDAVAADTSAPEAIREMARIRAAYILVDTGSAADVAERAEPLSSDDHPLRHAAREALGLAAWKEGRLGDARALFNQIVDDPAAPRNAQQRA 207
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Match: A0A2D7ZJ66_9CAUL (TPR_21 domain-containing protein n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A2D7ZJ66_9CAUL) HSP 1 Score: 86.7 bits (213), Expect = 2.440e-17 Identity = 57/167 (34.13%), Postives = 76/167 (45.51%), Query Frame = 1
Query: 22 SAVYTAADKQLDEGNPDEAVAEFVELGANGPDGYAGLALMRAAAIRHNEGDEITAIKYFDQAAEKFSAPRHKQLAQLKAAYLLAGQGAYSDVIERMTPLAETDAPYEFLARELLGFAYSESGNASSAREQFAYLTSIPGVPPTVKQRAEQSMALMGVKTAITAPEPV 522
S Y + G+ D+A F E+ A GPDGYA LALM+ A +R N+ P A+LK+A+ L S++ R+ PL E PY LA E L FA G AR F L +PGV +QRA+ + A++ TA PE V
Sbjct: 57 SETYAEGVEAFGAGDMDKAEQRFAEVAAEGPDGYAALALMQQAGLRVNDXXXXXXXXXXXXXXXXXXXPILADAARLKSAFALLDTAPLSELKTRLEPLTEEGRPYRALALEALAFAKLMGGEMDEARADFGVLALMPGVSELARQRAQAARAMIDSGTAGALPEAV 223
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Match: A0A4R0PAT9_9HYPH (Tetratricopeptide repeat protein n=1 Tax=Oricola cellulosilytica TaxID=1429082 RepID=A0A4R0PAT9_9HYPH) HSP 1 Score: 84.7 bits (208), Expect = 7.830e-17 Identity = 55/153 (35.95%), Postives = 76/153 (49.67%), Query Frame = 1
Query: 31 YTAADKQLDEGNPDEAVAEFVELGANGPDGYAGLALMRAAAIRHNEGDEITAIKYFDQAAEKFSAPRH-KQLAQLKAAYLLAGQGAYSDVIERMTPLAETDAPYEFLARELLGFAYSESGNASSAREQFAYLTSIPGVPPTVKQRAEQSMALM 486
+ AA EGN + A+AE L +G Y LA MRAA + +GD A+ FD+ A SAP + +A+++AAY+L G+ SDV ER PLA P ARE LG A + + A+ F + P P QRA + L+
Sbjct: 62 FLAALNDAGEGNTEAALAELRSLEQDGYGAYPVLARMRAATLLQQQGDAAGAVAAFDEVAADGSAPDAIRDIARIRAAYILVDSGSASDVAERAEPLASDSHPMRHAAREALGLAAWKEERLADAKALFQQILDDPAAPRNTMQRASLMLDLI 214 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig104379.601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig104379.601.1 >prot_P-canaliculata_contig104379.601.1 ID=prot_P-canaliculata_contig104379.601.1|Name=mRNA_P-canaliculata_contig104379.601.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=190bp EKKAQSVSAVYTAADKQLDEGNPDEAVAEFVELGANGPDGYAGLALMRAAback to top mRNA from alignment at P-canaliculata_contig104379:3..572+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig104379.601.1 ID=mRNA_P-canaliculata_contig104379.601.1|Name=mRNA_P-canaliculata_contig104379.601.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=570bp|location=Sequence derived from alignment at P-canaliculata_contig104379:3..572+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig104379:3..572+ >mRNA_P-canaliculata_contig104379.601.1 ID=mRNA_P-canaliculata_contig104379.601.1|Name=mRNA_P-canaliculata_contig104379.601.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1140bp|location=Sequence derived from alignment at P-canaliculata_contig104379:3..572+ (Pelvetia canaliculata dioecious)back to top |