mRNA_P-canaliculata_contig10432.592.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Match: A0A6H5JYC7_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC7_9PHAE) HSP 1 Score: 424 bits (1091), Expect = 5.080e-145 Identity = 211/306 (68.95%), Postives = 240/306 (78.43%), Query Frame = 2
Query: 26 IMSVALFSLLRKGGALRGLPVLKSFSGWPFRNGLPRTRPCSGMDAAAVAEGPEGTDLPEVMHRVVEEDELKAEVIIVGDVHGCHGEMVTLLKRCGYRLGNQEDRERFSVVLAGDLVNKGPGNAEVVRTARKEGFLAVRGNHDNFILAATTGVGRFSDALTLEERLKSPPWVQELSSDDVRWLSALPYTLSFPSMGFIVVHAGLVPGVPLERQDTTAMSCMRNVVESETGIGYEPRVNAKEGIPWAKAWKGPEHVYFGHDAVRGFQREPFATGLDTGCVYGRSLTAIVLPGGRIVCVPAEAEWEKPG 943
+MS+AL +LR+G A R + + G C+ AA GPEGTDLP VMHR V +ELKAEVI+VGD+HGC+GEMV+LL+RCGYRLGN+EDRERFSVVLAGDLVNKGPG+ +VVRTAR+EGFLAVRGNHDNF LAA TGVGRFS K PPWV++LSSDD++W+SALPYTLSFPS+G I+VHAGLVPGVPL QD AMSCMRNVVE E G GYEPR +G+ WAKAWKGPEHVYFGHDA RGFQ+E FATGLDTGCVYGRSLTA+VLPG R+VCVPAEA W PG
Sbjct: 16 VMSLALLCMLRRGVAFRSGSIAALSRTLCKQRGQTARGDCA---AAGRHAGPEGTDLPGVMHRTVSAEELKAEVIVVGDIHGCYGEMVSLLERCGYRLGNKEDRERFSVVLAGDLVNKGPGSVDVVRTAREEGFLAVRGNHDNFALAAATGVGRFSPKEGEGGGAKPPPWVEQLSSDDLQWISALPYTLSFPSLGCIIVHAGLVPGVPLNGQDAEAMSCMRNVVEMEGGGGYEPRTLPDQGLAWAKAWKGPEHVYFGHDAKRGFQKEAFATGLDTGCVYGRSLTAVVLPGRRVVCVPAEAMWSAPG 318
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Match: A0A813JGW0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JGW0_POLGL) HSP 1 Score: 205 bits (522), Expect = 1.050e-59 Identity = 113/243 (46.50%), Postives = 151/243 (62.14%), Query Frame = 2
Query: 179 PEGTDLPEVMHRVVEEDEL----KAEVIIVGDVHGCHGEMVTLLKRCGYRLGNQEDRERFSVVLAGDLVNKGPGNAEVVRTARKEGFLAVRGNHDNFILAATTGVGRFSDAL-TLEERLKSPPWVQELSSDDVRWLSALPYTLSFPSMGFIVVHAGLVPGVPLERQDTTAMSCMRNVVESETGIGYEPRVNAKEG-IPWAKAWKGPEHVYFGHDAVRGFQREPFATGLDTGCVYGRSLTAIVL 889
P GT LP + HR VE E+ ++IVGDVHGC E+ +LLK + D+ R ++VL GDLVNKGP + EV+ AR G VRGNH++ +L A GVGR+++ L + + K ++ ++ VRW+ LP+TLS P + +VVHAGL+PGVPLE+Q M +R+V S++ G+E +EG WAK W GPEHV FGHDA R Q FATGLDTGC YG LTA+V+
Sbjct: 29 PSGTPLPLISHRRVERHEVCNQPGGRLLIVGDVHGCAEELRSLLKAESF------DKGRDTLVLVGDLVNKGPSSGEVIAIARDNGAFCVRGNHEDELLEAWHGVGRYANGLGSYRQNAKG-----QVDAEAVRWVQELPFTLSLPWLKLVVVHAGLIPGVPLEKQKVKDMMWVRDVRPSDSDAGWEGLETPQEGSYSWAKVWSGPEHVVFGHDAKRKLQTHEFATGLDTGCCYGFQLTALVV 260
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Match: A0A4D9DA84_9STRA (Metallophos domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA84_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.110e-59 Identity = 136/342 (39.77%), Postives = 178/342 (52.05%), Query Frame = 2
Query: 23 VIMSVALFSLLR-----KGGALRGLPVLKSFSGWPFRNGLPRTRPCSGMDAAAVAEGPE-------------GTDLPEVMHRVVEEDELKAEVIIVGDVHGCHGEMVTLLKRCGYRLGNQEDRERFSVVLAGDLVNKGPGNAEVVRTARKEGFLAVRGNHDNFILAATTGVGRFSDALTLEERLKSPPWVQELSSDDVRWLSALPYTLSFPSMGFIVVHAGLVPGVPLERQDTTAMSCMRNVVESETG-----IGYEPRVNAKEGIPWAKAW--KGPE-----------HVYFGHDAVRGFQREPFATGLDTGCVYGRSLTAIVLPGGRIVCVPAEAEWEKP 940
++MS+ L SLLR A + P+L G P +P S A++V+ P GT +P +HR++ DE K V++VGDVHGC E+ LL + Y SVVL GDLVNKGP +AE V+ R +GF +VRGNHD+ LAA VG+F+ +L + +V L DV WL +LPYTLS +G +VVHAGL+PG PL+ Q MS +R+V +E G +G E E PWAK W +G E H+ FGHDA RG Q ATGLDTGC YGR LT +LPG + V A ++ P
Sbjct: 24 MVMSLMLLSLLRYANNRPAAAFQAAPILLKRLGLP----VPSFSSSSLFSASSVSAVPHSLPSFANETLTPAGTRMPACVHRILTRDEAKERVLVVGDVHGCLEELQALLVKANYTAAKD------SVVLVGDLVNKGPLSAETVKWCRTQGFYSVRGNHDDSALAAYFRVGKFTGVSSLPQAYD---FVAALDEADVAWLDSLPYTLSIEHLGVVVVHAGLLPGRPLQMQQAADMSRIRSVKRAEEGGEGTWVGVEYIPENGEAEPWAKVWSQEGKECEGGEGSTDARHLLFGHDAKRGLQVFRKATGLDTGCCYGRELTLAILPGEERISVKALKAYQVP 352
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Match: A0A5D6Y7R9_9STRA (Metallophos domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7R9_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.060e-58 Identity = 126/259 (48.65%), Postives = 153/259 (59.07%), Query Frame = 2
Query: 194 LPEVMHRVVEEDELKAEVIIVGDVHGCHGEMVTLLKRCGYRLGNQEDRERFSVVLAGDLVNKGPGNAEVVRTARKEGFLAVRGNHDNFILAA----TTGVGRFSDALTLEERLKSPPWVQELSSDDVRWLSALPYTLSFPSMGFIVVHAGLVPGVPLERQDTTAMSCMRNV--VESETGI--------GYEPRVNAKEG---IPWAKAWKGPEHVYFGHDAVRGFQREPFATGLDTGCVYGRSLTAIVLPGGRIVCVPA 919
LP V+HRV E A V++VGDVH C E+ LL+ C + R ++VL GDLVNKGP EVVR AR+ L VRGNHD+ LAA TG G DA + R +V++LS +DVR+L LP+TL+ P+ IVVHAGLVPGVPL Q M MR + V+ + GI E R A+E WA W+GP+HV+FGHDAV G QRE FATGLDTGC YGR LTA +LP IV V A
Sbjct: 20 LPAVVHRVAELP-ATARVVVVGDVHACADELQLLLRACAFNAA------RDTLVLVGDLVNKGPKPVEVVRFAREANALCVRGNHDDAALAAYYAWRTGGGA-RDASDSKYR-----YVEQLSPEDVRFLEELPFTLTLPAQNAIVVHAGLVPGVPLHAQRPLDMYKMRFIEPVDQDGGIDEPVREWAALETRAAAREAGQLFQWATQWRGPQHVFFGHDAVPGLQREAFATGLDTGCCYGRQLTACILPAREIVQVQA 265
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Match: UPI0006B0D630 (uncharacterized protein LOC106461977 n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0D630) HSP 1 Score: 201 bits (510), Expect = 3.540e-58 Identity = 113/262 (43.13%), Postives = 152/262 (58.02%), Query Frame = 2
Query: 185 GTDLPEVMHRVVEEDELK--AEVIIVGDVHGCHGEMVTLLKRCGYRLGNQEDRERFSVVLAGDLVNKGPGNAEVVRTARKEGF--LAVRGNHDNFILAATTGVGRFSDALTLEERL-KSPPWVQELSSDDVRWLSALPYTLSFPSMGFIVVHAGLVPGVPLERQDTTAMSCMRNVVESETGI--GYEPRVNAKEGIPWAKAWKGPEHVYFGHDAVRGFQREPFATGLDTGCVYGRSLTAIVLPG---GRIVCVPAEAEWEKP 940
G P V+H++V E+ +K EV ++GDVHGC E++ LL++ ++ + GDLVNKGP + EVVR R + L VRGNHD +L + ++ E L K W+ E S DD+ +L LPYT++ PS+ IVVHAGLVPG+P+ERQD M MRN+ + G + + +EG PW W GPEHVYFGHDA R Q +ATGLDTGCVYG+ LT + + G G V V A+ +EKP
Sbjct: 25 GLRFPPVLHKIVTENFIKNFKEVFVIGDVHGCFDELIELLEKADVT------KDSCLKIFVGDLVNKGPKSLEVVRLLRNTPYSTLCVRGNHDEVVLEL------YHKKVSGEHHLTKHSAWINEFSEDDIDYLQNLPYTITLPSLNVIVVHAGLVPGLPMERQDPRHMVSMRNLTIKDYFWEGGIQATNSNQEGEPWGSLWPGPEHVYFGHDARRLLQLYSYATGLDTGCVYGKELTGVFIAGPRKGTFVSVTAQHMYEKP 274
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Match: A0A8K1FHR1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHR1_PYTOL) HSP 1 Score: 197 bits (500), Expect = 6.330e-57 Identity = 111/253 (43.87%), Postives = 151/253 (59.68%), Query Frame = 2
Query: 194 LPEVMHRVVEEDELKAEVIIVGDVHGCHGEMVTLLKRCGYRLGNQEDRERFSVVLAGDLVNKGPGNAEVVRTARKEGFLAVRGNHDNFILAATTG-VGRFSDALTLEERLKSPPWVQELSSDDVRWLSALPYTLSFPSMGFIVVHAGLVPGVPLERQDTTAMSCMRNVVESETG---IGYEPRVNAKEGIPWAKAWKGPEHVYFGHDAVRGFQREPFATGLDTGCVYGRSLTAIVLPGGRIVCVPAEAEWEKP 940
LP MH +V + L + VIIVGD+HGC E+V LL + D + +++L GDLVNKGP + EVV+ AR++ L VRGNHD+ L+A DAL + +V+ S +D+R+L LP+T+S P+ ++VHAG+ PGV LE Q M MR + T +E + + E + WA WKGP+H+YFGHDA G Q+E FATGLDTGC YGR LTAI+LP +V V A A++ P
Sbjct: 15 LPSRMH-LVADIPLTSRVIIVGDIHGCFDELVELLAVAEF------DESKDTLILVGDLVNKGPKSPEVVQFARQKNALCVRGNHDDAALSAYYAWKSGGDDALPAKYG-----YVKSFSEEDIRYLEELPFTISLPAQNAMIVHAGIKPGVALEGQHPIDMYKMRFLEYESTNEEPAAFEVKPSDSEVVQWATQWKGPQHIYFGHDAKAGLQQEAFATGLDTGCCYGRQLTAIILPTRELVAVKARAQYSAP 255
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Match: A0A084SKV9_9DELT (Metallophosphatase n=3 Tax=Archangium TaxID=47 RepID=A0A084SKV9_9DELT) HSP 1 Score: 194 bits (494), Expect = 1.690e-56 Identity = 108/225 (48.00%), Postives = 131/225 (58.22%), Query Frame = 2
Query: 248 IIVGDVHGCHGEMVTLLKRCGYRLGNQEDRERFSVVLAGDLVNKGPGNAEVVRTARKEGFLAVRGNHDNFILAATTGVGRFSDALTLEERLKSPPWVQELSSDDVRWLSALPYTLSFPSMGFIVVHAGLVPGVPLERQDTTAMSCMRNVVESETGIGYEPRVNAKEGIPWAKAWKGPEHVYFGHDAVRGFQREPFATGLDTGCVYGRSLTAIVLPGGRIVCVPAE 922
+ +GDVHGC E+ LL CGYR G + VVL GDLV KGP +A VVR AR+ GFLAVRGNHD +L TG + L+ K + L +D ++L +LP FP + VVH GLVPGVPLE Q M +R++ EP G+PWA WKGPE V FGHDA+RG QR P+A GLD+GCVYG LTA VLP GR V A+
Sbjct: 5 LFIGDVHGCAEELDALLHACGYRRGER-------VVLVGDLVAKGPDSAGVVRRAREHGFLAVRGNHDEHVLRWHTG--KMPQGKKLKREHKQV--LNTLEDEDWKYLESLPVHRHFPELNVRVVHGGLVPGVPLEEQKPELMLNLRSITPEG-----EPSKKMDAGVPWASLWKGPELVIFGHDALRGVQRHPYAIGLDSGCVYGHELTAYVLPEGRFYSVKAK 213
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Match: UPI001F297D89 (metallophosphoesterase n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F297D89) HSP 1 Score: 193 bits (491), Expect = 4.580e-56 Identity = 107/224 (47.77%), Postives = 132/224 (58.93%), Query Frame = 2
Query: 248 IIVGDVHGCHGEMVTLLKRCGYRLGNQEDRERFSVVLAGDLVNKGPGNAEVVRTARKEGFLAVRGNHDNFILAATTGVGRFSDALTLEERLKSPPWVQELSSDDVRWLSALPYTLSFPSMGFIVVHAGLVPGVPLERQDTTAMSCMRNVVESETGIGYEPRVNAKEGIPWAKAWKGPEHVYFGHDAVRGFQREPFATGLDTGCVYGRSLTAIVLPGGRIVCVPA 919
+ +GDVHGC E+ LL CG+R G + VVL GDLV KGP +A VVR AR++GFLAVRGNHD +L +G+ L E R + L+ +D +L A P FP + + VH GLVPGVPLE+Q + +R++ E T P G PWA W GPE V FGHDA+RG QR P A GLDTGCVYG LTA V+P GR+V VPA
Sbjct: 4 LFIGDVHGCAQELDALLAACGWRRGER-------VVLVGDLVAKGPDSAGVVRRAREQGFLAVRGNHDAHVLRWHSGLAPEGKKLGKEHRQV----LDTLAPEDWTYLEAQPLYRRFPELNALAVHGGLVPGVPLEQQRPDELLNLRSIAEDGT-----PSKRVDGGAPWASLWPGPELVIFGHDAMRGLQRHPHAIGLDTGCVYGGQLTAYVMPEGRLVSVPA 211
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Match: UPI0014580908 (bis(5'-nucleosyl)-tetraphosphatase PrpE [asymmetrical]-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014580908) HSP 1 Score: 194 bits (492), Expect = 1.360e-55 Identity = 113/259 (43.63%), Postives = 150/259 (57.92%), Query Frame = 2
Query: 194 LPEVMHRVVEEDEL-KAEVIIVGDVHGCHGEMVTLLKRCGYRLGNQEDRER-FSVVLAGDLVNKGPGNAEVVRTARKEGFLAVRGNHDNFILAATTGVGRFSDALTLEERLKSPP---WVQELSSDDVRWLSALPYTLSFPSMGFIVVHAGLVPGVPLERQDTTAMSCMRNVVESETGIGYEPRVNAKE----GIPWAKAWKGPEHVYFGHDAVRGFQREPFATGLDTGCVYGRSLTAIVLPG-GRIVCVPAEAEWEKP 940
LP H V+++D + V ++GDVHGC+ E++ LL L E+++R V GDL+NKGP NA+V++ + AVRGNHD +L + R +D PP W + L+ D +L+ LPYT+S PS +VVHAGLVPG+PLE QD T M MRNV E G + A E G WA W GPEHVYFGHDAVRGFQ PFATGLDTGC+YG+ LT + + G + + V ++ + P
Sbjct: 27 LPLNCHLVLDDDVIGNRSVFVIGDVHGCYDELLELLS-----LAESEEQDRPILPVFVGDLINKGPKNADVLQKIKSMEAYAVRGNHDEAVLRQL--LNRRNDP-----EYAFPPKYKWCKSLTDSDADFLTKLPYTISIPSCNALVVHAGLVPGIPLENQDLTDMIVMRNVERKEDGS-----LKASEAHFVGEQWASKWPGPEHVYFGHDAVRGFQNFPFATGLDTGCLYGKELTGLFINGCNKRISVKSQKVYRPP 268
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Match: UPI00193B9ED6 (metallophosphoesterase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI00193B9ED6) HSP 1 Score: 191 bits (486), Expect = 2.310e-55 Identity = 106/228 (46.49%), Postives = 135/228 (59.21%), Query Frame = 2
Query: 248 IIVGDVHGCHGEMVTLLKRCGYRLGNQEDRERFSVVLAGDLVNKGPGNAEVVRTARKEGFLAVRGNHDNFILAATTGVGRFSDALTLEERLKSPPWVQELSSDDVRWLSALPYTLSFPSMGFIVVHAGLVPGVPLERQDTTAMSCMRNVVESETGIGYEPRVNAKEGIPWAKAWKGPEHVYFGHDAVRGFQREPFATGLDTGCVYGRSLTAIVLPGGRIVCVPAEAEW 931
I +GDVHGC E+ LL+ C YR G++ VVL GDLV KGP +A VVR AR+ G LAVRGNHD +L + + L+ K + L+ +D +L +LP L FP + VVH GLVPGVPLE Q M +R++ EP ++G PWA WKGPE V FGHDA+RG QR P+A GLD+GCVYG++LTA VLP G V A+ E+
Sbjct: 5 IFIGDVHGCAEELEALLRECDYRPGDR-------VVLVGDLVAKGPDSAGVVRLARERGLLAVRGNHDEHVLRWRAR--KMPEGKKLKREHKQV--LDTLADEDWAYLESLPLHLHFPELNVRVVHGGLVPGVPLEEQKPELMLNLRSITPEG-----EPSKKLEDGAPWASQWKGPELVIFGHDALRGVQRHPYAIGLDSGCVYGQNLTAYVLPEGHFYSVKAKREY 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10432.592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10432.592.1 >prot_P-canaliculata_contig10432.592.1 ID=prot_P-canaliculata_contig10432.592.1|Name=mRNA_P-canaliculata_contig10432.592.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=313bp MSVALFSLLRKGGALRGLPVLKSFSGWPFRNGLPRTRPCSGMDAAAVAEGback to top mRNA from alignment at P-canaliculata_contig10432:1653..4297+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10432.592.1 ID=mRNA_P-canaliculata_contig10432.592.1|Name=mRNA_P-canaliculata_contig10432.592.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2645bp|location=Sequence derived from alignment at P-canaliculata_contig10432:1653..4297+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10432:1653..4297+ >mRNA_P-canaliculata_contig10432.592.1 ID=mRNA_P-canaliculata_contig10432.592.1|Name=mRNA_P-canaliculata_contig10432.592.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1878bp|location=Sequence derived from alignment at P-canaliculata_contig10432:1653..4297+ (Pelvetia canaliculata dioecious)back to top |