mRNA_P-canaliculata_contig1041.561.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Match: D8LRC0_ECTSI (W2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC0_ECTSI) HSP 1 Score: 575 bits (1482), Expect = 1.560e-196 Identity = 323/396 (81.57%), Postives = 347/396 (87.63%), Query Frame = 1
Query: 1 MAGNMNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRNPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPETKYKIKNGSIFHKCAACGAKEMVDMSHKLCTYIVNSAKKSKKDSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAKDTTSNEGDTAEAKHTVDEFGDVVATSQSLEVEDAVAFADSVTAIRRHMQDGSSDEHIFEEIRTAQTFAAFPVHYRIHLYVAAAFFDADKVTQDDIKSKSHMFDMLKSRLEDQRHIIAAFELLCQVHRPNLIGFFPVILKHLYDADIVEEEAMLMWAGEEGRSEEFTPPSLSDEQVAALRAKAEPFVIWLEEADE 1188
M+GN+NISG EPIDDP YR YKMPRVIGKVEGRGNGIKTVIFNV DLSLALKR+PGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPE+KYKIKNG+IFHKC ACGAKEMVDMSHKLCTYIVN+AKK+KK +XXXXXXXXXXXXXXXXXXXX XXXXX N D E K TV+EFGDVVATS SLEVEDAVAF DSV AIRRH+ DG+S+E+IFEEIRTAQTFAAFPVHYRIHL+VAA+F ADKVT+DDI+S++ MFDMLKSR +DQRHII AFELLCQVHRPNL+GFFPVILKHLYD+DIVEEEAMLMWAGE+GRSEEFTPP+LSDEQVAALRAKA PFV WLEEADE
Sbjct: 1 MSGNINISGTEPIDDPEYR--YKMPRVIGKVEGRGNGIKTVIFNVMDLSLALKRDPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKS--KXXXXXXXXXXXXXXXXXXXXEEVSLNGDDSAKEKKDXXXXXXXXXXXENTSDDGETKTTVNEFGDVVATSGSLEVEDAVAFDDSVAAIRRHLDDGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFELLCQVHRPNLVGFFPVILKHLYDSDIVEEEAMLMWAGEQGRSEEFTPPALSDEQVAALRAKATPFVTWLEEADE 392
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Match: A0A6T5QBS0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QBS0_HETAK) HSP 1 Score: 297 bits (761), Expect = 4.880e-89 Identity = 212/397 (53.40%), Postives = 265/397 (66.75%), Query Frame = 1
Query: 13 MNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRNPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPETKYKIKNGSIFHKCAACGAKEMVDMSHKLCTYIVNSAKKSKKDSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAKDTTSNEGDTAEAKHTVDEFGDVV----ATSQSLEVEDAVAFADSVTAIRRHMQDGSSDEHIF-EEIRTAQTFAAFPVHYRIHLYVAAAFFDADKVTQDDIKSKSHMFDMLKSRLEDQRHIIAAFELLCQVHRPNLIGFFPVILKHLYDADIVEEEAMLMWAGEEGRSEEFTPPSLSDEQVAALRAKAEPFVIWLEEADE 1188
+NI GLE IDDPAYR YKMP++IGKVEGRGNGIKT I N+T+L+ +L R+PGEVCKFFG ELGAQT++ EE+E+A+VNGAH++ LQQ+V +Y + FVLCPNCRLPET YKIK+ +I+HKC ACGAKEMVDM HKL TYI+ + KK+K K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A L VED AF V ++RR + D + EE+R AQT ++FP H+R+HL VAAAF + + + + RH+I AFELLC RP L P ILK +D D++EEE +L WA +EGR+E ++P +S E++A ++A P V WLEEA++
Sbjct: 4 INIRGLEAIDDPAYR--YKMPKIIGKVEGRGNGIKTRIVNITELATSLHRDPGEVCKFFGCELGAQTKWVEEEEKALVNGAHSDNDLQQMVFRYCQAFVLCPNCRLPETDYKIKSETIWHKCMACGAKEMVDMQHKLTTYILGNVKKAKLAEKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLGGLSVEDQSAFDTGVESVRRFLASPGWDTPLLMEELRVAQTLSSFPAHFRVHLLVAAAFAEGPVGAAEVAARAADLRAAHNGNPILARHMIGAFELLCARRRPELKPLLPAILKFCFDEDVLEEELILEWAEDEGRTE-YSPEGVSAEELAEMKALCAPLVTWLEEAED 397
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Match: A0A1Z5JLW0_FISSO (Translation initiation factor 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLW0_FISSO) HSP 1 Score: 286 bits (732), Expect = 5.440e-85 Identity = 210/406 (51.72%), Postives = 272/406 (67.00%), Query Frame = 1
Query: 13 MNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRNPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPETKYKIKNGSIFHKCAACGAKEMVDMSHKLCTYIVNSAKKSKKDS-KEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAKDTTSNEGDTAEAKHTVDEFGDVVATSQSLE----VEDAVAFADSVTAIRRHMQDGSS--DEHIFEEIRTAQTFAAFPVHYRIHLYVAAAFFDADKVTQDDIKSKS-HMFDMLKSRLED-----QRHIIAAFELLCQVHRPNLIGFFPVILKHLYDADIVEEEAMLMWAGEEGRSEEFTPPSLSDEQVAALRAKAEPFVIWLEEADEE 1191
+NI+G P+DDPAYR YKMP V GK+EG GNGIKTV+ NV D++ +L R PGEV KFFGTE+GAQ+RY+ + +RAIVNGAHT+ATLQ+L+H+Y+E FVLCP CRLPETKYKIK+ +I+H CAACGAK+MVDMSHKLC YI+ KK+KKD K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + KD S + D DEF V+D AF +V A + +++ ++ D+ + E + Q +A H +I + + AAF T D K+K + + +R+ + +RHII+A E C N FPV+LK LYD D ++EE +L WA ++GRSE FT PS+ ++ A LR +AEP V+WL+EA+ E
Sbjct: 9 INIAGTTPVDDPAYR--YKMPAVFGKIEGSGNGIKTVLVNVLDVANSLHREPGEVSKFFGTEMGAQSRYSADTDRAIVNGAHTDATLQELMHRYIEKFVLCPTCRLPETKYKIKSDTIYHSCAACGAKDMVDMSHKLCNYILAENKKAKKDKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDKNYIKDALSGKKD--------DEFXXXXXXXXXXXXTEVVDDDSAFQLAVDATKTFIKENANATDDQLIEYVTNQQMASALKSHDKIRILILAAF------TSDFYKNKEVEKYAPVIARIANSNRIMERHIISALEAFCVEKTKN----FPVLLKQLYDEDALDEETILEWA-DQGRSE-FTLPSVDEDSRAILRGEAEPVVVWLQEAESE 392
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Match: B7G289_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G289_PHATC) HSP 1 Score: 283 bits (724), Expect = 1.200e-83 Identity = 199/413 (48.18%), Postives = 256/413 (61.99%), Query Frame = 1
Query: 13 MNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRNPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPETKYKIKNGSIFHKCAACGAKEMVDMSHKLCTYIVNSAKKSKKDSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAKDTTSNEGDTAEAKHTVDEFGDV-----------VATSQSLEVEDAVAFADSVTAIRRHMQDGS--SDEHIFEEIRTAQTFAAFPVHYRIHLYVAAAFFDADKVTQDDIKSKSHMFDMLKSRLEDQRHIIAAFELLCQVHRPNLIGFFPVILKHLYDADIVEEEAMLMWAGEEGRSEEFTPPSLSDEQVAALRAKAEPFVIWLEEADEEGDE-DED 1209
+NISG P+DDP YR YKMP V GK+EG GNGIKTVI N+T+++L+L R PGEV KFFGTELGAQTRY+ E +RA+VNGAH +A LQ L+H+Y+E FVLCPNC LPET YKIKN +I+HKCAACGAKEMVDMSHKLC YI+ KK+KKDSK+ X XXXXXXXXXXXXXXXXXXXXXXXX X V+ + V+D A +V A ++++ + S SD+ + E + Q +A H ++H+ V AA ++ K S ++ + +RH+IA+ E LC + +P FPV++K YD D + EE +L WA +EGRSE FT P + ++ A LR +AEP V+WL+EAD E D DED
Sbjct: 9 INISGASPVDDPEYR--YKMPAVFGKIEGSGNGIKTVIPNITEVALSLHRQPGEVNKFFGTELGAQTRYSAETDRAVVNGAHMDAVLQDLMHRYIERFVLCPNCNLPETDYKIKNDAIWHKCAACGAKEMVDMSHKLCNYILAEDKKAKKDSKKSKKGDKDDXKXXXXXXXXXXXXXXXXXXXXXXXXDKKSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSLASEAGVDDQGALLLAVEATKKYIAENSDVSDKELSEVVTNQQMASALKSHDKVHIIVRAALSAQFFKNKEIEKYSSAIYSITSGNKIMERHLIASLEALC-IDKPKN---FPVMIKQFYDEDALAEETILEWA-DEGRSE-FTLPEVDEDVRATLRGEAEPVVVWLQEADSEDDSSDED 413
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Match: A0A7S2KDW7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KDW7_9STRA) HSP 1 Score: 281 bits (719), Expect = 3.390e-83 Identity = 207/402 (51.49%), Postives = 269/402 (66.92%), Query Frame = 1
Query: 13 MNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRNPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPETKYKIKNGSIFHKCAACGAKEMVDMSHKLCTYIVNSAKKSKKDSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAKDTTSNEGDTAEAKHTVDEFGDVVATSQSLE-VEDAVAFADSVTAIRRHMQDG--SSDEHIFEEIRTAQTFAAFPVHYRIHLYVAAAFFDADKVTQDDIKSKSHMFDMLKSRLEDQRHIIAAFELLCQVHRPNLIGFFPVILKHLYDADIVEEEAMLMWAGEEGRSEEFTPPSLSDEQVAALRAKAEPFVIWLEE--ADEEGDED 1203
+NISG P+DDP YR YKMP+V+GK+EGRGNG KTVI N+++L+L+L R+PGEV KFFGTELGAQT Y++E RA+VNG HT+A LQQ VHKYVE FV+CPNC LPET YKIK+G I HKCAACGAKEMVDMSHKL YI+ KK+K+D+ XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX E + A GD+ +E V+D A A +V A ++ + D ++ I +++ Q + RIH++V AAF T+ K+ + + + + +RH+I+A E LC P F V+LK LYD DI+EE+ ++ WAGE GR++ +T S+ +EQ +A+RA+A+P V WL+E +DEE D D
Sbjct: 7 INISGTSPVDDPEYR--YKMPKVVGKLEGRGNGSKTVIVNISELALSLHRDPGEVNKFFGTELGAQTTYSDETNRAVVNGHHTDAVLQQAVHKYVEAFVICPNCGLPETDYKIKSGVITHKCAACGAKEMVDMSHKLTNYILAQDKKAKQDAXXXXXXXXXXXXXXXXGDSDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXDGELEDA--------VGDISLGDDDVEHVDDDNAMALAVEATKKFLSDNPDATPAAISDKVANEQMASGLKSQDRIHIFVRAAFTTDFFKTKQVAKNAPSISKITQGKTVMERHLISACECLC-ADEPKK---FAVLLKQLYDEDILEEDTIMEWAGE-GRTD-YTLDSVDEEQRSAMRAEADPVVTWLQEDSSDEESDSD 392
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Match: A0A7S1D9Q5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q5_CYCTE) HSP 1 Score: 280 bits (716), Expect = 1.540e-82 Identity = 208/416 (50.00%), Postives = 273/416 (65.62%), Query Frame = 1
Query: 13 MNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRNPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPETKYKIKNGSIFHKCAACGAKEMVDMSHKLCTYIVNSAKKSKKDSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------HAKDTTSNEGDTAEAKHTVDEFGDVVATSQSLEVEDAVAFADSVTAIRRHMQDGS--SDEHIFEEIRTAQTFAAFPVHYRIHLYVAAAFFDADKVTQDDIKSKSHMF-DMLKSRLEDQRHIIAAFELLCQVHRPNLIGFFPVILKHLYDADIVEEEAMLMWAGEEGRSEEFTPPSLSDEQVAALRAKAEPFVIWLEEADEEGDEDED 1209
+NI+G P+DDP YR YKMP V GK+EGRGNGIKTVI N++D+ L+L R GEV KFFGTELGAQT YN + +RA+VNGAHT+ TLQ L+H+Y+E FVLCPNC LPET+YKIKN I+HKCAACG+K+MVDMSHKLCTYI+ KK+KK++K XXXXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXXX A ++G AEA DE DV V+D A +V A ++++ D S S + E I Q +A H ++H+ V + Q++++ + +F ++ +RH+IAA E + +P FPV++K YD D +EE+ +L WAGE GR++ +T S+ +E A LRA+AEP V+WL+EAD + ++DED
Sbjct: 9 INIAGTNPVDDPEYR--YKMPAVYGKIEGRGNGIKTVIPNISDVGLSLHREAGEVTKFFGTELGAQTTYNPDTDRAVVNGAHTDDTLQDLMHRYIEKFVLCPNCSLPETEYKIKNDCIYHKCAACGSKDMVDMSHKLCTYILAQDKKAKKEAKSKDXXXXXXXXXXXXXXXXXXDXXGSDXXXXXXXXXXXXXXXXXXXXXXXGGNYLEEAMFGKKDDGLDAEA----DEQDDV---DSEAGVDDEGAMRLAVEATKKYIADNSDVSAADLAEVITNQQMASALKSHDKVHIAVQSVL-TPQFFKQNEVEKYAPVFSEITNGNSIMERHLIAALEAF-SIEKPKS---FPVLIKQFYDEDALEEDTILEWAGE-GRND-YTLESVDEETRAVLRAEAEPVVVWLQEADSDDEDDED 408
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Match: B8BW00_THAPS (W2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW00_THAPS) HSP 1 Score: 278 bits (710), Expect = 9.790e-82 Identity = 207/406 (50.99%), Postives = 271/406 (66.75%), Query Frame = 1
Query: 13 MNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRNPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPETKYKIKNGSIFHKCAACGAKEMVDMSHKLCTYIVNSAKKSKKDSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAKDTTSNEGDTAEAKHTV---DEFGDVVATSQSLEVEDAVAFADSVTAIRRHMQDG--SSDEHIFEEIRTAQTFAAFPVHYRIHLYVAAAFFDADKVTQDDI-KSKSHMFDMLKSRLEDQRHIIAAFELLCQVHRPNLIGFFPVILKHLYDADIVEEEAMLMWAGEEGRSEEFTPPSLSDEQVAALRAKAEPFVIWLEEADEEGDEDEDS 1212
+NISG P+DDP YR YKMP V GK+EG+GNGIKTVI N++D+ L+L R+ GEV KFFG ELGAQT YN E +RA+VNGAHT+ LQQ+VHKY+ELFVLCPNCRLPET+YKIK+G I+HKCAACG K+ VDM+HKLCTYI+ KK+K+D+K+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D + D V+DA A A +V A+++ + D +S I E++ Q + +IH++V + F D Q + K + + + + +RH+IA+FE LC V P F V+LK L+D +++EE+ +L WAGE GR++ +T S+ ++Q AALR +AEP V+WL+E D+ DE DS
Sbjct: 8 VNISGTTPVDDPEYR--YKMPTVYGKIEGKGNGIKTVIPNISDVGLSLHRDAGEVNKFFGCELGAQTTYNTETDRAVVNGAHTDQVLQQMVHKYIELFVLCPNCRLPETEYKIKSGMIYHKCAACGNKDAVDMTHKLCTYILAQDKKAKQDAKKSGKKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYDSYDDDDNGGTEEHVDDANAMALAVEAMKKFLADNPDASPSAIAEKVVNEQMASGLKSQDKIHIFVQSVF-TPDFYKQKQVEKHAPAIAKITQGKNVMERHLIASFEGLC-VDEPKK---FAVVLKQLFDEEVLEEDTILEWAGE-GRTD-YTLESVDEDQRAALRGEAEPVVVWLQE-DDSSDEGSDS 403
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Match: A0A6V2MCK3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2MCK3_9STRA) HSP 1 Score: 273 bits (698), Expect = 6.740e-80 Identity = 210/423 (49.65%), Postives = 277/423 (65.48%), Query Frame = 1
Query: 13 MNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRNPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPETKYKIKNGSIFHKCAACGAKEMVDMSHKLCTYIVNSAKKSKKDSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAKDTT------------------SNEGDTAEAKHTVDEFGDVVATSQSLEVEDAVAFADSVTAIRRHMQDG--SSDEHIFEEIRTAQTFAAFPVHYRIHLYVAAA----FFDADKVTQDDIKSKSHMFDMLKSRLEDQRHIIAAFELLCQVHRPNLIGFFPVILKHLYDADIVEEEAMLMWAGEEGRSEEFTPPSLSDEQVAALRAKAEPFVIWLEEADEEGDEDED 1209
+NISG P+DDP YR YKMP V GK+EGRGNGIKTVI N+++++L+L R PGEV KFFG ELGAQT YN + +RA+VNGAHT++ LQ +VH+Y+E FVLCPNCRLPET YKIK+ +I+HKCAACGAKEM++M HKLCTYI+ KK+KKD+K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SN+ D E D+ E++D A A +V ++ +++ +S + I E + Q +A + ++H++V +A FF +V K + + +S +RH+IAA E +C V +P FPV++K LYD D +EEE +L WA EEGR+E +T ++ ++ AALR +AEP VIWL+E ++ D D D
Sbjct: 8 INISGATPVDDPEYR--YKMPTVYGKIEGRGNGIKTVIPNISEVALSLHRPPGEVNKFFGCELGAQTTYNADTDRAVVNGAHTDSVLQNMVHRYIEGFVLCPNCRLPETDYKIKSDTIYHKCAACGAKEMLNMQHKLCTYILAQDKKAKKDAKSKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNDDD--ELAGATDDLS----LGSDNELDDGNAMALAVEGTKKFLKENPDASVDDIVECVVNQQMASALKSYDKVHIFVQSAITINFFKEKQVE----KYAPAISKITQSNPMMERHLIAALEAVC-VEKPKN---FPVLIKQLYDEDALEEEVILQWA-EEGRNE-YTLDAVDEDSRAALRGEAEPLVIWLQEEEDSSDSDSD 412
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Match: A0A7S3LEE8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEE8_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.240e-79 Identity = 192/406 (47.29%), Postives = 259/406 (63.79%), Query Frame = 1
Query: 13 MNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRNPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPETKYKIKNGSIFHKCAACGAKEMVDMSHKLCTYIVNSAKKSKKDSK-----EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAKDTTSNEGDTAEAKHTVDEFGDVVATSQSLEVEDAVAFADSVTAIRRHMQDG--SSDEHIFEEIRTAQTFAAFPVHYRIHLYVAAAFFDADKVTQDDIKSKSHMFDMLKSRLEDQRHIIAAFELLCQVHRPNLIGFFPVILKHLYDADIVEEEAMLMWAGEEGRSEEFTPPSLSDEQVAALRAKAEPFVIWLEEADEEGDEDED 1209
+N++G PIDDP YR YKMP V GK+EG GNGIKTVI N+TD+ +L R+P EV KFFGTELGAQTRY+ E +RAI+NGAHT+ATLQ+L+ +Y++ FVLCPNC LPET+YKIK+ ++FHKC ACGAKEMVDMSHKLC +I+ KK+KKD K E XXXXXXXX XXXXXXXXXXXXXXXXXXXXXX V+ + ++D+ A +V A+R+ ++D +SD+ + E + Q +A ++++ V+AA ++ K + + + +RH+IA E L VH+P FPV++K YD D + EE +L WA ++GR+E +T + +E AA+R +AEP V+WL+EAD E D D+D
Sbjct: 9 INLAGTTPIDDPEYR--YKMPAVFGKIEGSGNGIKTVIPNITDVGTSLHRSPAEVNKFFGTELGAQTRYSAETDRAIINGAHTDATLQELIKRYIDKFVLCPNCNLPETEYKIKSDTVFHKCMACGAKEMVDMSHKLCNFILAENKKAKKDGKGKSKKEDXXXXXXXXDGSDEDKKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSLASEAGIDDSGARQLAVDAVRKFLEDKPEASDDELIELVTNQQMSSALKSQDKVYILVSAAITPNFFKKKEVAKYAKALVKITNNNKIMERHLIATLEAL-SVHKPKN---FPVLIKQFYDEDALAEETILEWA-DDGRTE-YTLDVVDEETRAAIRGEAEPVVVWLQEADSEDDSDDD 406
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Match: A0A1E7FBJ2_9STRA (eIF-5_eIF-2B-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBJ2_9STRA) HSP 1 Score: 268 bits (686), Expect = 4.330e-78 Identity = 195/419 (46.54%), Postives = 261/419 (62.29%), Query Frame = 1
Query: 13 MNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLALKRNPGEVCKFFGTELGAQTRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPETKYKIKNGSIFHKCAACGAKEMVDMSHKLCTYIVNSAKKSKK---DSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAKDTTSNEGDTAE-----------AKHTVDEFGDVVATSQSLE---VEDAVAFADSVTAIRRHMQ---DGSSDEHIFEEIRTAQTFAAFPVHYRIHLYVAAAFFDADKVTQDDIKSKSHMFDMLKSRLEDQRHIIAAFELLCQVHRPNLIGFFPVILKHLYDADIVEEEAMLMWAGEEGRSEEFTPPSLSDEQVAALRAKAEPFVIWLEE--ADEEGDED 1203
+NISG P+DDP YR YKMP V GK+EG GNGIKT I N+T+++ +L R PGEV KFFG ELGAQT YNEE +RAIVNG+HT+ TLQ+L+H+YVE FVLCP C LPETKY IKNG+I+HKCAACGAKEMVDM+HKL YI+ KK+KK +K+ XXXXXXXXXXXXXXXXXXXXXXXX T++ +GD+ E K D FG + ++ V+D A +V R+ ++ D S E I E + Q +A H ++H++ AAF ++ K + + +RH+IA+ E L + +P FPV++K LYD D +EEE ++ WA E+GRS+ +T ++ +E AALR +AEP V+WL+E +D EG+++
Sbjct: 9 INISGNNPVDDPEYR--YKMPAVFGKIEGSGNGIKTAIPNITEVANSLYRPPGEVNKFFGCELGAQTTYNEETDRAIVNGSHTDDTLQKLMHRYVETFVLCPTCGLPETKYSIKNGTIWHKCAACGAKEMVDMNHKLTNYILAQDKKNKKLKNKNKKAAGKTNDLGKKDNSDEEXXXXXXXXXXXXXXXXXXXXXXXXXXSSTSAGDGDSIEEEKDYLKKAMYGKKEDDGFGSDDSDDDAVSEAGVDDQGAMLLAVEGTRKFLEANPDASVGE-IVEMVTNQQMASALKAHDKVHIFARAAFTPLFFKNKEAEKYAPVVSKISNGNKIIERHLIASLEFL-SIEKPK---GFPVMIKQLYDEDALEEETIIEWA-EDGRSD-YTLAAVDEETRAALRGEAEPVVVWLQELESDSEGEDE 418 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig1041.561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig1041.561.1 >prot_P-canaliculata_contig1041.561.1 ID=prot_P-canaliculata_contig1041.561.1|Name=mRNA_P-canaliculata_contig1041.561.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=406bp MAGNMNISGLEPIDDPAYRRAYKMPRVIGKVEGRGNGIKTVIFNVTDLSLback to top mRNA from alignment at P-canaliculata_contig1041:15447..22243- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig1041.561.1 ID=mRNA_P-canaliculata_contig1041.561.1|Name=mRNA_P-canaliculata_contig1041.561.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=6797bp|location=Sequence derived from alignment at P-canaliculata_contig1041:15447..22243- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig1041:15447..22243- >mRNA_P-canaliculata_contig1041.561.1 ID=mRNA_P-canaliculata_contig1041.561.1|Name=mRNA_P-canaliculata_contig1041.561.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2436bp|location=Sequence derived from alignment at P-canaliculata_contig1041:15447..22243- (Pelvetia canaliculata dioecious)back to top |