mRNA_P-canaliculata_contig10395.543.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Match: A0A2I0RZ59_9PEZI (Signal recognition particle subunit SRP14 n=1 Tax=Cercospora zeina TaxID=348901 RepID=A0A2I0RZ59_9PEZI) HSP 1 Score: 186 bits (471), Expect = 3.760e-57 Identity = 99/146 (67.81%), Postives = 118/146 (80.82%), Query Frame = 1
Query: 1 RTPTSVEKMTRDHLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTATKPADDPLRDLHPPHPLPIIIRATDGKSTTKDKKSKNNEKVKLSTLVAPDDLETFFTRYAEVCKAGMQSLRKRDRSKRKKEKGRKKK 438
RTP S M HLSNEEFF L+ LI +Q+ GHGSVYLTQKR+T+DPST A DT+ K ADDPL DLHPP+PLP+I+RATDGK+ ++D+K KN +K+KLST+V PDDLE FF +YAEVCKAGMQSL+KRDRSKRKK KG+ KK
Sbjct: 43 RTPESPITMANPHLSNEEFFINLTSLISNVQEKGHGSVYLTQKRLTYDPSTTAEDTSK--KVADDPLWDLHPPNPLPLIVRATDGKTQSRDRK-KNKDKMKLSTIVQPDDLEAFFAKYAEVCKAGMQSLKKRDRSKRKKVKGKGKK 185
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Match: A0A2G5HTE0_CERBT (Signal recognition particle subunit SRP14 n=4 Tax=Cercospora TaxID=29002 RepID=A0A2G5HTE0_CERBT) HSP 1 Score: 182 bits (462), Expect = 1.780e-56 Identity = 96/138 (69.57%), Postives = 115/138 (83.33%), Query Frame = 1
Query: 25 MTRDHLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTATKPADDPLRDLHPPHPLPIIIRATDGKSTTKDKKSKNNEKVKLSTLVAPDDLETFFTRYAEVCKAGMQSLRKRDRSKRKKEKGRKKK 438
M + HLSNEEFF L+ L+ +Q+ GHGSVYLTQKR+++DPST A D + K ADDPL DLHPP+PLP+I+RATDGKS +KD+K KN +K+KLST+V PDDLE FFTRYAEVCKAGMQSL+KRDRSKRKK KG+ KK
Sbjct: 1 MAKPHLSNEEFFINLTSLVSKVQEKGHGSVYLTQKRLSYDPSTTAEDESK--KVADDPLWDLHPPNPLPLIVRATDGKSQSKDRK-KNKDKIKLSTIVQPDDLEAFFTRYAEVCKAGMQSLKKRDRSKRKKVKGKGKK 135
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Match: A0A6A6Q580_9PEZI (Signal recognition particle subunit SRP14 n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q580_9PEZI) HSP 1 Score: 169 bits (429), Expect = 2.170e-51 Identity = 86/128 (67.19%), Postives = 104/128 (81.25%), Query Frame = 1
Query: 25 MTRDHLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTATKPADDPLRDLHPPHPLPIIIRATDGKSTTKDKKSKNNEKVKLSTLVAPDDLETFFTRYAEVCKAGMQSLRKRDRSK 408
M+R+HLSNE+FFS L+ L+E QK GHGSV+LTQKRMTFD S+A K ADDPL DLHPPHPLP+I+RATDG+ST D K+KN +KVKLST+V P+++ FF RYAEVC+AGMQSL+KRDRSK
Sbjct: 1 MSREHLSNEDFFSQLAALVEKTQKKGHGSVHLTQKRMTFDTSSAP---QKPVKVADDPLWDLHPPHPLPLIVRATDGESTKADMKTKNPDKVKLSTVVQPEEMAAFFARYAEVCRAGMQSLKKRDRSK 125
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Match: N1PK55_DOTSN (Signal recognition particle subunit SRP14 n=1 Tax=Dothistroma septosporum (strain NZE10 / CBS 128990) TaxID=675120 RepID=N1PK55_DOTSN) HSP 1 Score: 168 bits (425), Expect = 7.770e-51 Identity = 87/127 (68.50%), Postives = 104/127 (81.89%), Query Frame = 1
Query: 31 RDHLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTATKPADDPLRDLHPPHPLPIIIRATDGKSTTKDKKSKNNEKVKLSTLVAPDDLETFFTRYAEVCKAGMQSLRKRDRSKR 411
R+HL ++EFF+ L+ LIE Q+ GHGSVYLTQKR+T+DPST P A + DD L DL+PP+PLP+IIRATDGKS KD+K KN +K+KLST+V PDDLE FFTRYAEVCKAGMQSL+KRDRSKR
Sbjct: 2 REHLGHDEFFTQLTSLIENTQQKGHGSVYLTQKRLTYDPSTKTP----APRSIDDSLSDLNPPNPLPLIIRATDGKSQDKDRK-KNKDKIKLSTIVQPDDLEAFFTRYAEVCKAGMQSLKKRDRSKR 123
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Match: A0A6G1L0S7_9PEZI (Signal recognition particle subunit SRP14 n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1L0S7_9PEZI) HSP 1 Score: 168 bits (425), Expect = 9.390e-51 Identity = 86/129 (66.67%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 25 MTRDHLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTATKPADDPLRDLHPPHPLPIIIRATDGKSTTKDKKSKNNEKVKLSTLVAPDDLETFFTRYAEVCKAGMQSLRKRDRSKR 411
M R HL +++FF+ L+ LI Q+ GHG+VYLTQKR+TFD S ++P + TK DDPL DLHPP+PLPII+RATDGKS KD++ KN EKVKLST+V PDD+E+F+TRYAEVCKAGMQSL+KRDRSKR
Sbjct: 1 MARSHLGSDDFFTQLASLIHATQQKGHGAVYLTQKRLTFDTSASSP---SPTKVQDDPLWDLHPPNPLPIIVRATDGKSQLKDRQ-KNKEKVKLSTIVQPDDIESFYTRYAEVCKAGMQSLKKRDRSKR 125
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Match: A0A8H6RPC0_9PEZI (Signal recognition particle subunit SRP14 n=1 Tax=Pseudocercospora fuligena TaxID=685502 RepID=A0A8H6RPC0_9PEZI) HSP 1 Score: 164 bits (415), Expect = 2.570e-49 Identity = 91/137 (66.42%), Postives = 110/137 (80.29%), Query Frame = 1
Query: 25 MTRDHLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTATKPADDPLRDLHPPHPLPIIIRATDGKSTTKDKKSKNNEKVKLSTLVAPDDLETFFTRYAEVCKAGMQSLRKRDRSKRK-KEKGRK 432
M ++HLSN+EFF L+ LIE Q+ GHGSV+LTQKR+TFD S ++P K ADDPL DL+PP+PLPIIIRATDGKS +KD+ KN K+KLSTLV PDDL++FF RYAEVCKAGMQSL+KRDR K K K+KG+K
Sbjct: 1 MPKEHLSNDEFFVQLTSLIEKTQQKGHGSVFLTQKRLTFDTSASSPPPGQ--KAADDPLWDLNPPNPLPIIIRATDGKSQSKDR-VKNKVKIKLSTLVQPDDLDSFFARYAEVCKAGMQSLKKRDRKKAKSKKKGKK 134
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Match: A0A139HI83_9PEZI (Signal recognition particle subunit SRP14 n=1 Tax=Pseudocercospora eumusae TaxID=321146 RepID=A0A139HI83_9PEZI) HSP 1 Score: 164 bits (415), Expect = 3.360e-48 Identity = 87/138 (63.04%), Postives = 113/138 (81.88%), Query Frame = 1
Query: 22 KMTRDHLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTATKPADDPLRDLHPPHPLPIIIRATDGKSTTKDKKSKNNEKVKLSTLVAPDDLETFFTRYAEVCKAGMQSLRKRDRSKRK-KEKGRK 432
+M ++HLSN+EFF+ L+ LIE Q+ GHGSV+LTQKR+TFD S ++P K ADDPL DLHPP+PLPII+RATDGKS ++D+ KN +K+KLST+V P++L++FF RYAEVCKAGMQSL+KRDR K K K+KG+K
Sbjct: 84 EMPKEHLSNDEFFAQLTSLIEKTQQKGHGSVFLTQKRLTFDTSASSPPPGQ--KVADDPLWDLHPPNPLPIIVRATDGKSQSRDR-VKNKDKIKLSTIVQPEELDSFFARYAEVCKAGMQSLKKRDRKKAKSKKKGKK 218
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Match: M3AUW1_PSEFD (Signal recognition particle subunit SRP14 n=1 Tax=Pseudocercospora fijiensis (strain CIRAD86) TaxID=383855 RepID=M3AUW1_PSEFD) HSP 1 Score: 160 bits (405), Expect = 8.500e-48 Identity = 89/137 (64.96%), Postives = 110/137 (80.29%), Query Frame = 1
Query: 25 MTRDHLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTATKPADDPLRDLHPPHPLPIIIRATDGKSTTKDKKSKNNEKVKLSTLVAPDDLETFFTRYAEVCKAGMQSLRKRDRSKRK-KEKGRK 432
M ++HLSN+EFF L+ LIE Q+ GHGSV+LTQKR+TF+ S ++P K ADDPL DL+PP+PLPIIIRATDGKS ++++ KN KVKLST+V PDDL+ FFTRYAEVCKAGMQSL+KRDR K K K+KG+K
Sbjct: 1 MPKEHLSNDEFFVQLTSLIEKTQQKGHGSVFLTQKRLTFNTSVSSPPLGQ--KVADDPLWDLNPPNPLPIIIRATDGKSRSEER-IKNKNKVKLSTIVQPDDLDIFFTRYAEVCKAGMQSLKKRDRKKAKSKKKGKK 134
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Match: A0A4U0U270_9PEZI (Signal recognition particle subunit SRP14 n=1 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4U0U270_9PEZI) HSP 1 Score: 160 bits (405), Expect = 1.280e-47 Identity = 92/149 (61.74%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 25 MTRDHLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTATKPADDPLRDLHPPHPLPIIIRATDGKSTTKDK-----------KSKNNEKVKLSTLVAPDDLETFFTRYAEVCKAGMQSLRKRDRSKRKK-EKGRKK 435
M R+HLSN++FF+ L+ LIET + GHGSVYLTQKR+TF S AP + T P DDPL DLHPP+PLP+I+RATDGKS DK ++KN EKVKLST+V PD++E FFTRYAEVCK GM+ LR+RDRSKRKK +KG+KK
Sbjct: 1 MAREHLSNDDFFTQLASLIETTHQKGHGSVYLTQKRLTFGGS--APSSPTGKVP-DDPLWDLHPPNPLPLIVRATDGKSHKLDKEGGATAKGGIGRTKNAEKVKLSTVVQPDNIEVFFTRYAEVCKGGMRGLRRRDRSKRKKKDKGKKK 146
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Match: A0A1Z5SPL5_HORWE (Signal recognition particle subunit SRP14 n=13 Tax=Hortaea werneckii TaxID=91943 RepID=A0A1Z5SPL5_HORWE) HSP 1 Score: 159 bits (403), Expect = 4.480e-47 Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 1
Query: 37 HLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTATKPADDPLRDLHPPHPLPIIIRATDGKSTTKDKKSKNNEKVKLSTLVAPDDLETFFTRYAEVCKAGMQSLRKRDRSKR 411
HLS ++FF+ L+ LIE Q+ GHGSVYLTQKR+TFD S + A K ADDPL DLHP +PLP+I+RATDGKS ++D+K KN EKVKLST+V PDD+E FF RYAEVCK GMQSL+KRDRSKR
Sbjct: 32 HLSADDFFAQLASLIEKTQQKGHGSVYLTQKRLTFDTSNPSQANAPAQKVADDPLWDLHPVNPLPLIVRATDGKSQSQDRK-KNKEKVKLSTIVHPDDVEAFFGRYAEVCKQGMQSLKKRDRSKR 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10395.543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10395.543.1 >prot_P-canaliculata_contig10395.543.1 ID=prot_P-canaliculata_contig10395.543.1|Name=mRNA_P-canaliculata_contig10395.543.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=150bp MTRDHLSNEEFFSGLSKLIETLQKAGHGSVYLTQKRMTFDPSTAAPDTNTback to top mRNA from alignment at P-canaliculata_contig10395:1402..1977+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10395.543.1 ID=mRNA_P-canaliculata_contig10395.543.1|Name=mRNA_P-canaliculata_contig10395.543.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=576bp|location=Sequence derived from alignment at P-canaliculata_contig10395:1402..1977+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10395:1402..1977+ >mRNA_P-canaliculata_contig10395.543.1 ID=mRNA_P-canaliculata_contig10395.543.1|Name=mRNA_P-canaliculata_contig10395.543.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=900bp|location=Sequence derived from alignment at P-canaliculata_contig10395:1402..1977+ (Pelvetia canaliculata dioecious)back to top |