mRNA_P-canaliculata_contig103889.534.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Match: A0A7T8ADF3_9SPHN (Uncharacterized protein n=2 Tax=unclassified Croceicoccus TaxID=2629967 RepID=A0A7T8ADF3_9SPHN) HSP 1 Score: 62.4 bits (150), Expect = 4.400e-11 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 1
Query: 19 VLGGLLYAGSKYFSKAHAEKPGGYKNSAASSSGPHNTAVQDKDKGLNRAKSDKWSEVDEELDQSFPASDPPANY 240
VLG L YAG K+F+K H E P + + ++ T V+D G R K W++ DEE+D+SFPASDPPANY
Sbjct: 8 VLGALGYAGYKHFTKQHDE-PAAFADGQPHATQGGGTVVRDAGAGSMRDKPSTWTKTDEEMDESFPASDPPANY 80
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Match: A0A7S8IW20_9SPHN (Uncharacterized protein n=2 Tax=Qipengyuania soli TaxID=2782568 RepID=A0A7S8IW20_9SPHN) HSP 1 Score: 59.3 bits (142), Expect = 6.220e-10 Identity = 42/83 (50.60%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 1 MFKKLIVLGGLLYAGSKYFSKAHAEKP---GGYKNSAASSSGPHNTAVQDKDKGLNRAKSDKWSEVDEELDQSFPASDPPANY 240
M KL+ LGGL YAG KY+ K + KP G N A +GP A++D D G N W++ DEE DQSFPASDPPANY
Sbjct: 2 MLLKLLALGGLGYAGYKYYEK-NQSKPAFAGNQGNVAIRDAGPD--AMRD-DNGHN------WTKTDEESDQSFPASDPPANY 74
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Match: A0A845A813_9SPHN (Uncharacterized protein n=1 Tax=Altericroceibacterium indicum TaxID=374177 RepID=A0A845A813_9SPHN) HSP 1 Score: 58.2 bits (139), Expect = 1.820e-9 Identity = 40/84 (47.62%), Postives = 48/84 (57.14%), Query Frame = 1
Query: 1 MFKKLIVLGGLLYAGSKYFSKAH-AEKP---GGYKNSAASSSGPHNTAVQDKDKGLNRAKSDKWSEVDEELDQSFPASDPPANY 240
M KL VLGGL YAG KY+ K P GG NS+ +GP A+ DK K +W+ VD+ D+SFPASDPPANY
Sbjct: 1 MLLKLAVLGGLGYAGYKYYEKTRDGSSPAYAGGQGNSSIRDAGP--AAMADKPKR-------QWNSVDQASDESFPASDPPANY 75
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Match: UPI001C8AE687 (hypothetical protein n=1 Tax=Qipengyuania mesophila TaxID=2867246 RepID=UPI001C8AE687) HSP 1 Score: 57.4 bits (137), Expect = 3.480e-9 Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 1 MFKKLIVLGGLLYAGSKYFSKAHAEKPGGYKNSAASSSGPHNTAVQDKDKGLNRAKSD-KWSEVDEELDQSFPASDPPANY 240
M KL+ LGGL YAG +Y+ K K+ A ++ + AV+D G R K D WS+ DE D+SFPASDPPANY
Sbjct: 1 MLLKLLALGGLGYAGYRYYEKN--------KSQPAFAANQGDAAVRDAGPGAMRDKPDGDWSKTDEASDESFPASDPPANY 73
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Match: A0A1A7QDQ0_9SPHN (Uncharacterized protein n=1 Tax=Erythrobacter sp. QSSC1-22B TaxID=1860125 RepID=A0A1A7QDQ0_9SPHN) HSP 1 Score: 57.0 bits (136), Expect = 5.180e-9 Identity = 35/85 (41.18%), Postives = 45/85 (52.94%), Query Frame = 1
Query: 1 MFKKLIVLGGLLYAGSKYFSKAHAEKPG-----GYKNSAASSSGPHNTAVQDKDKGLNRAKSDKWSEVDEELDQSFPASDPPANY 240
M KL LG + YAG KY+ K ++ G G + ++GP T +K WS+ DEELD+SFPASDPPANY
Sbjct: 1 MLLKLAALGAVGYAGYKYYEKNRLDENGVAFAKGQPDGRVRNAGPKATTTDEKS----------WSKTDEELDESFPASDPPANY 75
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Match: A0A0H4V929_9SPHN (Uncharacterized protein n=2 Tax=Aurantiacibacter atlanticus TaxID=1648404 RepID=A0A0H4V929_9SPHN) HSP 1 Score: 57.0 bits (136), Expect = 5.570e-9 Identity = 32/77 (41.56%), Postives = 41/77 (53.25%), Query Frame = 1
Query: 10 KLIVLGGLLYAGSKYFSKAHAEKPGGYKNSAASSSGPHNTAVQDKDKGLNRAKSDKWSEVDEELDQSFPASDPPANY 240
+L+ LG + YAG +Y+ K AEK + A S D ++ D W EVDE D+SFPASDPPANY
Sbjct: 2 RLVALGAVGYAGYRYYEKKQAEKNEAFAADEAGGSNFAQVRNAGPDSMASKPAKDTWDEVDEASDESFPASDPPANY 78
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Match: A0A844YHA4_9SPHN (Uncharacterized protein n=1 Tax=Qipengyuania oceanensis TaxID=1463597 RepID=A0A844YHA4_9SPHN) HSP 1 Score: 56.6 bits (135), Expect = 7.520e-9 Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 1 MFKKLIVLGGLLYAGSKYFSKAHAEK-----PGGYKNSAASSSGPHNTAVQDKDKGLNRAKSDKWSEVDEELDQSFPASDPPANY 240
M KL+ LG + Y G KY+ K +A+K G +++ +GP TA++D+ K RA W++ DEE D+SFPASDPPANY
Sbjct: 1 MLLKLLTLGAIGYGGYKYYEKNYADKNAPAFAGNQGDASVRDAGP--TAMRDEPK---RA----WTKTDEESDESFPASDPPANY 76
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Match: UPI001F44785B (hypothetical protein n=1 Tax=Erythrobacter sp. SDW2 TaxID=2907154 RepID=UPI001F44785B) HSP 1 Score: 55.5 bits (132), Expect = 2.090e-8 Identity = 38/84 (45.24%), Postives = 47/84 (55.95%), Query Frame = 1
Query: 1 MFKKLIVLGGLLYAGSKYFSK----AHAEKPGGYKNSAASSSGPHNTAVQDKDKGLNRAKSDKWSEVDEELDQSFPASDPPANY 240
M K + LG L YAG KY+ K HA G ++ SGP +++DK + KWS+ DEE DQSFPASDPPANY
Sbjct: 1 MLLKALALGALGYAGYKYYEKNQKGPHAAFAGNQGDALIRDSGPG--SMRDKP-------ARKWSKTDEESDQSFPASDPPANY 75
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Match: A0A845AFR0_9SPHN (Uncharacterized protein n=1 Tax=Qipengyuania algicida TaxID=1836209 RepID=A0A845AFR0_9SPHN) HSP 1 Score: 55.1 bits (131), Expect = 2.900e-8 Identity = 37/81 (45.68%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 10 KLIVLGGLLYAGSKYFSKAHAEKP----GGYKNSAASSSGPHNTAVQDKDKGLNRAKSDKWSEVDEELDQSFPASDPPANY 240
KL+ LG L YAG +Y+ K E GG + ++GP +++DK RA W+EVDE+ DQSFPASDPPANY
Sbjct: 3 KLLALGALGYAGYRYYEKTQREAEPAFAGGQGEGSIRNAGPE--SMRDKPA---RA----WTEVDEDSDQSFPASDPPANY 74
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Match: A0A4R0P1Q0_9SPHN (Uncharacterized protein n=1 Tax=Erythrobacteraceae bacterium CFH 75059 TaxID=2528174 RepID=A0A4R0P1Q0_9SPHN) HSP 1 Score: 55.1 bits (131), Expect = 2.970e-8 Identity = 35/82 (42.68%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 1 MFKKLIVLGGLLYAGSKYFSK--AHAEKPGGYKNSAASSSGPHNTAVQDKDKGLNRAKSDKWSEVDEELDQSFPASDPPANY 240
M KL VLGGL YAG KY+ K A+ +P A + + ++D R + WS+ DE LDQ+FPASDPPA Y
Sbjct: 1 MLLKLAVLGGLGYAGYKYYEKNFANPSRP-------AFAGNQGDATIRDAGVSSMRDNAQSWSKTDEALDQTFPASDPPATY 75 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig103889.534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig103889.534.1 >prot_P-canaliculata_contig103889.534.1 ID=prot_P-canaliculata_contig103889.534.1|Name=mRNA_P-canaliculata_contig103889.534.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=81bp MFKKLIVLGGLLYAGSKYFSKAHAEKPGGYKNSAASSSGPHNTAVQDKDKback to top mRNA from alignment at P-canaliculata_contig103889:268..510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig103889.534.1 ID=mRNA_P-canaliculata_contig103889.534.1|Name=mRNA_P-canaliculata_contig103889.534.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=243bp|location=Sequence derived from alignment at P-canaliculata_contig103889:268..510+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig103889:268..510+ >mRNA_P-canaliculata_contig103889.534.1 ID=mRNA_P-canaliculata_contig103889.534.1|Name=mRNA_P-canaliculata_contig103889.534.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=486bp|location=Sequence derived from alignment at P-canaliculata_contig103889:268..510+ (Pelvetia canaliculata dioecious)back to top |