mRNA_P-canaliculata_contig103788.523.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig103788.523.1
Unique NamemRNA_P-canaliculata_contig103788.523.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Match: UPI0003FE26E6 (ligase-associated DNA damage response DEXH box helicase n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI0003FE26E6)

HSP 1 Score: 480 bits (1235), Expect = 1.720e-161
Identity = 237/311 (76.21%), Postives = 271/311 (87.14%), Query Frame = 1
Query:   19 KLHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQHVRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTGKRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIEVIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTRAQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVSTSALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCNPLEAIECAVAIEAIEDG 951
            KLHT+YISPLRALTNDIERNL +PI ++ LPI++GVRTGDTK + RAKQ+K PPDILLTTPESLMLLLSY +A  YF+ L+ V+IDELHSFS+ KRGDFTSLA++RLK+LAPDH+RFGLSATIA  T AAKWLGP+  P+++I V GDTPPEL I+   + R PLGGHN RFAV DIY VIK A S I+FVNTRAQ EL+FQ LWQ NDDNL IGLYHGSLSRERRQKTE  IA+G +RAVVSTSALEMGIDWGD+D ILQ+GAPKGVSRLLQRIGRSNHRMDEPS+A LVPCNPLEA+ECAVAI+AI++G
Sbjct:   80 KLHTLYISPLRALTNDIERNLNRPIAELSLPIRVGVRTGDTKSYQRAKQRKTPPDILLTTPESLMLLLSYPDAETYFSSLQTVIIDELHSFSSNKRGDFTSLALSRLKTLAPDHIRFGLSATIADETSAAKWLGPSGSPANIISVSGDTPPELTIME-GKTRYPLGGHNPRFAVRDIYSVIKKAKSAIIFVNTRAQTELLFQQLWQVNDDNLPIGLYHGSLSRERRQKTEDLIATGKLRAVVSTSALEMGIDWGDIDLILQVGAPKGVSRLLQRIGRSNHRMDEPSEAVLVPCNPLEAVECAVAIKAIQNG 389          
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Match: UPI00198B4EF1 (DNA ligase-associated DEXH box helicase n=2 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00198B4EF1)

HSP 1 Score: 478 bits (1231), Expect = 5.180e-161
Identity = 234/311 (75.24%), Postives = 270/311 (86.82%), Query Frame = 1
Query:   19 KLHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQHVRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTGKRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIEVIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTRAQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVSTSALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCNPLEAIECAVAIEAIEDG 951
            +LHT+YISPLRALTNDIERNL  P+ D+ LPI IGVRTGDTK + R KQ+K PPDILLTTPESLMLLLSY +A  YF++LK V+IDELHSF+T KRGDFTSLA+ARLK+LAPDH+RFGLSATIA P  AA WLGPT +P++++EV GDTPP + I+ P + R PLGGHN+RFAV DIYD IK A S IVFVNTRAQ EL+FQ LW+ ND+ L IGLYHGSLSRERRQ+TE  IASG +RAVVSTSALEMGIDWGD+D ILQ+GAPKGVSRLLQRIGRSNHR+DEPS+A +VPCNPLEA+ECAVAIEAI++G
Sbjct:   70 RLHTLYISPLRALTNDIERNLNTPVSDLNLPITIGVRTGDTKSYQRTKQRKTPPDILLTTPESLMLLLSYPDADTYFSELKTVIIDELHSFATNKRGDFTSLALARLKTLAPDHIRFGLSATIADPKSAANWLGPTGEPAEVLEVKGDTPPHVAIMEP-DNRYPLGGHNSRFAVKDIYDAIKSAKSAIVFVNTRAQTELLFQQLWKINDEGLPIGLYHGSLSRERRQRTEGMIASGKIRAVVSTSALEMGIDWGDIDLILQVGAPKGVSRLLQRIGRSNHRLDEPSEALMVPCNPLEAVECAVAIEAIDEG 379          
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Match: A0A8J3CRJ1_9PROT (DNA ligase-associated DEXH box helicase n=2 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CRJ1_9PROT)

HSP 1 Score: 474 bits (1221), Expect = 4.040e-159
Identity = 233/310 (75.16%), Postives = 271/310 (87.42%), Query Frame = 1
Query:   22 LHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQHVRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTGKRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIEVIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTRAQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVSTSALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCNPLEAIECAVAIEAIEDG 951
            LHT+YISPLRALTNDIERNLM+P+GD+ LPI+IGVRTGDTK + R KQ+  PPDILLTTPESLMLLLSY+ APDYFA LKCVVIDE+HSF+TGKRGDFT+LA+ARLK+LAPDHVRFGLSATIA+P +AA+WLGPT  P+ LIEV G TPPE+ I+ P E R PLGGH++RFAV DIY +I+   + IVFVNTRAQAEL+FQ +W  NDD L IG+YHGSLSR+RRQKTE+ I++G MRAV+STSALEMGIDWG+VD I+Q+GAPKGVSRLLQRIGRSNHR+DE SKA LVP NPLE +EC VAI+AI DG
Sbjct:   84 LHTLYISPLRALTNDIERNLMRPVGDLDLPIEIGVRTGDTKSYQRKKQQTKPPDILLTTPESLMLLLSYETAPDYFASLKCVVIDEMHSFTTGKRGDFTALALARLKTLAPDHVRFGLSATIAAPDKAAEWLGPTGAPAALIEVAGHTPPEVTIIKP-EGRFPLGGHSSRFAVRDIYKIIREHQTTIVFVNTRAQAELLFQQMWDVNDDGLPIGVYHGSLSRDRRQKTESLISAGKMRAVISTSALEMGIDWGNVDAIIQVGAPKGVSRLLQRIGRSNHRIDEASKAILVPTNPLEVVECDVAIKAIADG 392          
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Match: UPI000373D8B9 (ligase-associated DNA damage response DEXH box helicase n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI000373D8B9)

HSP 1 Score: 465 bits (1196), Expect = 1.150e-155
Identity = 231/310 (74.52%), Postives = 265/310 (85.48%), Query Frame = 1
Query:   22 LHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQHVRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTGKRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIEVIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTRAQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVSTSALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCNPLEAIECAVAIEAIEDG 951
            LHT+YISPLRALTNDIERNL +P+ DM LPI IGVRTGDTKQ+ R KQ+K+PPDILLTTPESLMLLLSY+NA  YFA LKCV+IDELHSF+T KRGDFTSLA+ARLK+LAPDH+RFGLSAT+A P +AA+WLG + + + + EVI    P++ I+ P E R PLGGH+ RFA  DIY  IK A SVIVFVNTRAQAEL+FQ LWQ N+DNL IG+YHGSLSR+RRQKTE  IASG +RAVVSTSALEMGIDWGDVD ILQ+GAPKGVSRLLQRIGRSNHR+DEPS+A +VP NPLEA+EC VAI+AI  G
Sbjct:   83 LHTLYISPLRALTNDIERNLTRPVADMDLPITIGVRTGDTKQYQRQKQRKIPPDILLTTPESLMLLLSYENAEQYFASLKCVIIDELHSFATNKRGDFTSLALARLKTLAPDHIRFGLSATVAHPKKAAQWLGVSGEAATIHEVISAAKPDITIIEP-ETRFPLGGHSPRFATQDIYRAIKSARSVIVFVNTRAQAELLFQHLWQVNEDNLPIGVYHGSLSRDRRQKTEAMIASGKLRAVVSTSALEMGIDWGDVDMILQVGAPKGVSRLLQRIGRSNHRLDEPSRALMVPTNPLEAVECDVAIKAIAAG 391          
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Match: A0A1M5E051_9ALTE (ATP-dependent helicase Lhr and Lhr-like helicase n=6 Tax=Alteromonadaceae TaxID=72275 RepID=A0A1M5E051_9ALTE)

HSP 1 Score: 390 bits (1003), Expect = 6.540e-127
Identity = 193/317 (60.88%), Postives = 244/317 (76.97%), Query Frame = 1
Query:    1 RSIWAAKLHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQHVRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTGKRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIEVIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTRAQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVSTSALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCNPLEAIECAVAIEAIEDG 951
            R++ +  LHT+YISPL+ALT DI RNL++PI +M LPIK+  RTGDT  H R +Q+K PP ILLTTPESLML+LSY +AP  F  LK V+IDE+HS +  KRGDFT+LA+ARL++LAP  +R GLSAT+A P   A WLGPT  P D+++V     P++ +L  +E+RMP GG  A++AV DIY  I  A + +VFVNTRAQAEL+FQ LW  N   L I LYHGSLS+E+R+KTE  +ASGM+RA+V+TSALE+GIDWG+VD ++Q+GAPKGVSRLLQRIGR+NHR +EPSKA LVP N  EA+EC  A+ AIE G
Sbjct:   58 RNVDSEYLHTLYISPLKALTQDIHRNLLRPIEEMDLPIKVETRTGDTPSHKRQRQRKKPPHILLTTPESLMLMLSYADAPQIFGKLKTVIIDEVHSLTGNKRGDFTALALARLETLAPGFLRIGLSATVAEPALIASWLGPTGDPVDIVKVEEQQRPDIQLLE-SEQRMPFGGFMAKYAVGDIYKAICDAQTTLVFVNTRAQAELLFQLLWSENSQALPIALYHGSLSKEQRRKTEVMMASGMLRAIVTTSALELGIDWGNVDRVIQVGAPKGVSRLLQRIGRANHRFEEPSKALLVPANRFEALECQAAMTAIEKG 373          
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Match: A0A1E7ZGZ0_9ALTE (DNA ligase-associated DEXH box helicase n=1 Tax=Alteromonas confluentis TaxID=1656094 RepID=A0A1E7ZGZ0_9ALTE)

HSP 1 Score: 386 bits (991), Expect = 4.040e-125
Identity = 190/310 (61.29%), Postives = 243/310 (78.39%), Query Frame = 1
Query:   22 LHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQHVRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTGKRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIEVIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTRAQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVSTSALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCNPLEAIECAVAIEAIEDG 951
            LHT+YISPL+ALTNDI+RNL  P+  MGLP+ I  RTGDT  H R +Q++ PP+ILLTTPESLMLLLSY +AP  F  LK V++DE+HS    KRGDFTSLA+ARL+SLAPD  R GLSAT+A P   A WLG T +P+++I+V     P++ +L  +  RMP GG  AR+A+ ++Y+ +K A++ +VFVNTRAQAEL+FQ LW+ N + L I LYHGSLS+E+R+KTE+ ++ G++RA+VSTSALE+GIDWGDVD ++QIGAPKGVSRLLQRIGR+NHR+DEPSKA LVP N  EA+EC  A+ AI  G
Sbjct:   69 LHTLYISPLKALTNDIQRNLTDPVEAMGLPVTIESRTGDTPSHKRQRQRRKPPNILLTTPESLMLLLSYADAPKIFGHLKTVILDEVHSLVANKRGDFTSLALARLQSLAPDMHRVGLSATVAQPEVIAGWLGRTGEPAEVIQVPQTVKPDIKLL-DSRHRMPFGGFMARYAMEEVYEAVKQADTALVFVNTRAQAELVFQMLWEENKEGLPIALYHGSLSKEQRRKTESMMSQGVLRAIVSTSALELGIDWGDVDLVIQIGAPKGVSRLLQRIGRANHRLDEPSKALLVPANRFEAVECRAAMNAIAAG 377          
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Match: A0A385MZI6_9ALTE (Ligase-associated DNA damage response DEXH box helicase n=2 Tax=Alteromonadaceae TaxID=72275 RepID=A0A385MZI6_9ALTE)

HSP 1 Score: 386 bits (991), Expect = 4.800e-125
Identity = 193/312 (61.86%), Postives = 242/312 (77.56%), Query Frame = 1
Query:   16 AKLHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQHVRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTGKRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIEVIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTRAQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVSTSALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCNPLEAIECAVAIEAIEDG 951
            A LHT+YISPL+ALTNDI+RNLM P+  M LP+ I  RTGDT  H R +Q++ PP+ILLTTPESLMLLLSY +AP  F +LK V+IDE+HS    KRGDFTSLA+ARL++LAPD  R GLSAT+A P   A WLG T +P+++I+V     PE+ +L  +E RMP GG  AR+A+ ++Y  IK A + +VFVNTRAQAEL+FQ LW+ N + L I LYHGSLS+E+R+KTE+ +  G +RA+VSTSALE+GIDWGD+D ++QIGAPKGVSRLLQRIGR+NHR+DEPSKA LVP N  EA+EC  A+ AI  G
Sbjct:   65 AGLHTLYISPLKALTNDIQRNLMAPVEAMDLPVTIETRTGDTPSHKRQRQRRKPPNILLTTPESLMLLLSYADAPAIFKNLKTVIIDEVHSLVANKRGDFTSLALARLQTLAPDMHRVGLSATVAHPEVIAGWLGRTGEPAEVIQVPQAVKPEITLLE-SEHRMPFGGFMARYAMEEVYTAIKQAGTTLVFVNTRAQAELVFQMLWEENREGLPIALYHGSLSKEQRRKTESLMGQGSLRAIVSTSALELGIDWGDIDLVIQIGAPKGVSRLLQRIGRANHRLDEPSKALLVPANRFEAVECRAAMNAIAAG 375          
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Match: E3I222_RHOVT (DEAD/H associated domain protein n=6 Tax=Rhodomicrobium TaxID=1068 RepID=E3I222_RHOVT)

HSP 1 Score: 386 bits (992), Expect = 5.420e-125
Identity = 188/310 (60.65%), Postives = 242/310 (78.06%), Query Frame = 1
Query:   22 LHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQHVRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTGKRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIEVIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTRAQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVSTSALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCNPLEAIECAVAIEAIEDG 951
            +HT+YISPL+ALTNDIERNLM+PI +M L + +  RTGDT Q  RA+Q++ PP++ LTTPESLML+LS  +A   FA L+ V++DE+HSF+  KRGDFT+LA++RL +LAP  VRFGLSAT+A P   A WLGP   P+ L++      P++ +LVP E RMP GG  AR+AV +IYD I+ A + IVFVNTRAQAELM Q LW AN++NL I +YHGSLSRE+R+K E  +A+G +R+VV+T+ALE+GIDWGDVD ++Q+ APKGVSRLLQR+GRSNHR+DEPS+A LVP N  EA+EC  A+ AIE G
Sbjct:   90 IHTLYISPLKALTNDIERNLMRPIAEMDLAVSVESRTGDTPQSKRARQRRAPPNLFLTTPESLMLMLSSPDAERLFAGLRAVIVDEVHSFAATKRGDFTALALSRLAALAPQAVRFGLSATVADPAALAAWLGPVGVPAALLQSGLPMDPDIRLLVPEETRMPYGGFMARYAVPEIYDAIRRAGTSIVFVNTRAQAELMLQMLWDANEENLPIAVYHGSLSREQRRKAEAMMAAGKIRSVVATAALELGIDWGDVDLVIQVAAPKGVSRLLQRVGRSNHRLDEPSRAFLVPANRFEALECRAALTAIEKG 399          
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Match: A0A3D0T4G1_ALTSX (Ligase-associated DNA damage response DEXH box helicase (Fragment) n=1 Tax=Alteromonas sp. TaxID=232 RepID=A0A3D0T4G1_ALTSX)

HSP 1 Score: 380 bits (976), Expect = 5.700e-125
Identity = 192/313 (61.34%), Postives = 237/313 (75.72%), Query Frame = 1
Query:   13 AAKLHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQHVRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTGKRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIEVIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTRAQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVSTSALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCNPLEAIECAVAIEAIEDG 951
            A  LHT+YISPL+ALT DI RNL++PI +M LPI +  RTGDT  H R +Q+K PP ILLTTPESLML+LSY +AP  F  LK V+IDE+HS    KRGDFT+LA+AR++SLAP   R GLSAT+A P   A WLGPT +P+ L+EV     P ++IL  +E+RMP GG  A++A+ DIY  I  A + +VFVNTRAQAEL+FQ LW  N   L I LYHGSLS+E+R+KTE  +ASG +RA+V+TSALE+GIDWGDVD ++Q+GAPKGVSRLLQRIGR+NHR +E S+A LVP N  EA+EC  AIEAI  G
Sbjct:   62 AEYLHTLYISPLKALTQDIHRNLLRPIEEMALPITVETRTGDTPSHKRQRQRKRPPHILLTTPESLMLMLSYTDAPKIFGKLKTVIIDEVHSLIGNKRGDFTTLALARIESLAPGFKRIGLSATVAKPKLVADWLGPTGEPAALLEVEDTAKPAINILR-SEQRMPFGGFMAKYAIGDIYQAIAKAATTLVFVNTRAQAELLFQLLWSENAQVLPIALYHGSLSKEQRRKTEEMMASGKLRAIVTTSALELGIDWGDVDLVIQVGAPKGVSRLLQRIGRANHRFEEASEALLVPANRFEALECQAAIEAINQG 373          
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Match: UPI001E56280E (ligase-associated DNA damage response DEXH box helicase n=1 Tax=Glaciecola sp. MH2013 TaxID=2785524 RepID=UPI001E56280E)

HSP 1 Score: 385 bits (990), Expect = 8.860e-125
Identity = 191/308 (62.01%), Postives = 240/308 (77.92%), Query Frame = 1
Query:   22 LHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQHVRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTGKRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIEVIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTRAQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVSTSALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCNPLEAIECAVAIEAIE 945
            LHT+YISPL+ALT DI RNL  PI D+ LPI +G RTGDT  + R KQ+K PP+ILL TPESLML+LSY +AP  F D+K ++IDE HSF+  KRGDFT+LA+ARL+ LAP+HVRFGLSAT+A P   A WLG + +P  ++EV   T P++ IL  T++RMP GG+  ++AV DIY+ I  A + +VFVNTRAQAEL+FQ LW  N   L I +YHGSLS+E+RQKTE  +++G +RA+V+TSALE+GIDWGDVD ++Q+GAPKGVSRLLQRIGRSNHRMDEPS+A LVP N  E +EC  AI AI+
Sbjct:   82 LHTLYISPLKALTQDIHRNLKSPIDDLQLPISVGARTGDTTSYQRQKQRKNPPNILLITPESLMLMLSYADAPRIFGDVKNIIIDEAHSFAFTKRGDFTALALARLQHLAPEHVRFGLSATVAQPEVLATWLGRSGEPCKVLEVKSRTKPKVSILK-TKERMPFGGYMGKYAVKDIYERIVAAQTTLVFVNTRAQAELIFQHLWSENTHVLPIAIYHGSLSKEQRQKTEAMMSTGQLRAIVATSALELGIDWGDVDLVIQVGAPKGVSRLLQRIGRSNHRMDEPSQALLVPANRFETLECQAAINAIK 388          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig103788.523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0003FE26E61.720e-16176.21ligase-associated DNA damage response DEXH box hel... [more]
UPI00198B4EF15.180e-16175.24DNA ligase-associated DEXH box helicase n=2 Tax=Li... [more]
A0A8J3CRJ1_9PROT4.040e-15975.16DNA ligase-associated DEXH box helicase n=2 Tax=Al... [more]
UPI000373D8B91.150e-15574.52ligase-associated DNA damage response DEXH box hel... [more]
A0A1M5E051_9ALTE6.540e-12760.88ATP-dependent helicase Lhr and Lhr-like helicase n... [more]
A0A1E7ZGZ0_9ALTE4.040e-12561.29DNA ligase-associated DEXH box helicase n=1 Tax=Al... [more]
A0A385MZI6_9ALTE4.800e-12561.86Ligase-associated DNA damage response DEXH box hel... [more]
E3I222_RHOVT5.420e-12560.65DEAD/H associated domain protein n=6 Tax=Rhodomicr... [more]
A0A3D0T4G1_ALTSX5.700e-12561.34Ligase-associated DNA damage response DEXH box hel... [more]
UPI001E56280E8.860e-12562.01ligase-associated DNA damage response DEXH box hel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig103788contigP-canaliculata_contig103788:6..956 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score484.2
Seed ortholog evalue4.7e-134
Seed eggNOG ortholog1121948.AUAC01000003_gene2609
Preferred namelhr
KEGG koko:K03724
EggNOG free text desc.DEAD DEAH box helicase
EggNOG OGs1MUSW@1224,2TR7V@28211,43W5G@69657,COG1201@1,COG1201@2
COG Functional cat.L
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Exons1
Model size951
Cds size951
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815608.0692534-CDS-P-canaliculata_contig103788:5..9561622815608.0692534-CDS-P-canaliculata_contig103788:5..956Pelvetia canaliculata dioeciousCDSP-canaliculata_contig103788 6..956 -
1693494163.5575333-CDS-P-canaliculata_contig103788:5..9561693494163.5575333-CDS-P-canaliculata_contig103788:5..956Pelvetia canaliculata dioeciousCDSP-canaliculata_contig103788 6..956 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig103788.523.1prot_P-canaliculata_contig103788.523.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig103788 6..956 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig103788.523.1

>prot_P-canaliculata_contig103788.523.1 ID=prot_P-canaliculata_contig103788.523.1|Name=mRNA_P-canaliculata_contig103788.523.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=317bp
RSIWAAKLHTIYISPLRALTNDIERNLMKPIGDMGLPIKIGVRTGDTKQH
VRAKQKKVPPDILLTTPESLMLLLSYDNAPDYFADLKCVVIDELHSFSTG
KRGDFTSLAMARLKSLAPDHVRFGLSATIASPTEAAKWLGPTDQPSDLIE
VIGDTPPELDILVPTEKRMPLGGHNARFAVTDIYDVIKGANSVIVFVNTR
AQAELMFQALWQANDDNLSIGLYHGSLSRERRQKTETAIASGMMRAVVST
SALEMGIDWGDVDEILQIGAPKGVSRLLQRIGRSNHRMDEPSKATLVPCN
PLEAIECAVAIEAIEDG
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mRNA from alignment at P-canaliculata_contig103788:6..956-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig103788.523.1 ID=mRNA_P-canaliculata_contig103788.523.1|Name=mRNA_P-canaliculata_contig103788.523.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=951bp|location=Sequence derived from alignment at P-canaliculata_contig103788:6..956- (Pelvetia canaliculata dioecious)
CGCTCGATATGGGCGGCCAAACTCCACACCATTTATATCTCGCCGCTGCG CGCTTTGACCAATGATATTGAGCGTAATCTGATGAAACCGATTGGCGATA TGGGCTTGCCTATTAAGATCGGGGTTCGGACCGGGGATACCAAACAACAT GTCCGCGCCAAGCAGAAAAAGGTCCCGCCGGACATTCTGCTGACCACGCC GGAAAGCCTGATGTTGCTGCTGTCCTATGACAATGCGCCGGACTATTTCG CCGACCTTAAATGCGTCGTGATTGATGAGCTGCATAGCTTTTCCACGGGC AAGCGCGGGGATTTCACGTCCCTAGCCATGGCGCGGCTAAAATCTCTCGC GCCGGACCATGTGCGCTTCGGACTCTCCGCCACGATTGCCAGCCCGACAG AAGCCGCGAAATGGCTCGGCCCGACAGACCAGCCGTCAGACCTCATCGAA GTCATTGGCGACACGCCGCCCGAGCTGGACATCTTGGTCCCGACCGAAAA GCGCATGCCGCTGGGCGGGCATAATGCGCGTTTCGCCGTGACGGATATTT ACGACGTTATCAAAGGCGCGAATTCTGTCATCGTCTTCGTCAACACCCGC GCGCAAGCCGAGCTCATGTTTCAAGCGCTGTGGCAAGCGAATGACGACAA CCTATCGATTGGTCTTTATCACGGCAGTCTCTCACGCGAGCGGCGACAGA AAACGGAGACTGCGATTGCGTCAGGCATGATGCGCGCCGTTGTCTCCACC TCCGCGCTGGAGATGGGGATTGATTGGGGCGATGTGGATGAGATCTTGCA GATCGGTGCACCCAAAGGAGTCTCCCGATTGCTGCAACGCATCGGGCGGT CCAATCACCGTATGGACGAGCCGTCAAAGGCCACCCTCGTTCCGTGCAAT CCGTTGGAAGCCATCGAATGCGCCGTCGCGATTGAAGCGATTGAGGACGG G
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Coding sequence (CDS) from alignment at P-canaliculata_contig103788:6..956-

>mRNA_P-canaliculata_contig103788.523.1 ID=mRNA_P-canaliculata_contig103788.523.1|Name=mRNA_P-canaliculata_contig103788.523.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1902bp|location=Sequence derived from alignment at P-canaliculata_contig103788:6..956- (Pelvetia canaliculata dioecious)
CGCTCGATATGGGCGGCCAAACTCCACACCATTTATATCTCGCCGCTGCG
CGCTTTGACCAATGATATTGAGCGTAATCTGATGAAACCGATTGGCGATA
TGGGCTTGCCTATTAAGATCGGGGTTCGGACCGGGGATACCAAACAACAT
GTCCGCGCCAAGCAGAAAAAGGTCCCGCCGGACATTCTGCTGACCACGCC
GGAAAGCCTGATGTTGCTGCTGTCCTATGACAATGCGCCGGACTATTTCG
CCGACCTTAAATGCGTCGTGATTGATGAGCTGCATAGCTTTTCCACGGGC
AAGCGCGGGGATTTCACGTCCCTAGCCATGGCGCGGCTAAAATCTCTCGC
GCCGGACCATGTGCGCTTCGGACTCTCCGCCACGATTGCCAGCCCGACAG
AAGCCGCGAAATGGCTCGGCCCGACAGACCAGCCGTCAGACCTCATCGAA
GTCATTGGCGACACGCCGCCCGAGCTGGACATCTTGGTCCCGACCGAAAA
GCGCATGCCGCTGGGCGGGCATAATGCGCGTTTCGCCGTGACGGATATTT
ACGACGTTATCAAAGGCGCGAATTCTGTCATCGTCTTCGTCAACACCCGC
GCGCAAGCCGAGCTCATGTTTCAAGCGCTGTGGCAAGCGAATGACGACAA
CCTATCGATTGGTCTTTATCACGGCAGTCTCTCACGCGAGCGGCGACAGA
AAACGGAGACTGCGATTGCGTCAGGCATGATGCGCGCCGTTGTCTCCACC
TCCGCGCTGGAGATGGGGATTGATTGGGGCGATGTGGATGAGATCTTGCA
GATCGGTGCACCCAAAGGAGTCTCCCGATTGCTGCAACGCATCGGGCGGT
CCAATCACCGTATGGACGAGCCGTCAAAGGCCACCCTCGTTCCGTGCAAT
CCGTTGGAAGCCATCGAATGCGCCGTCGCGATTGAAGCGATTGAGGACGG
GCGCTCGATATGGGCGGCCAAACTCCACACCATTTATATCTCGCCGCTGC
GCGCTTTGACCAATGATATTGAGCGTAATCTGATGAAACCGATTGGCGAT
ATGGGCTTGCCTATTAAGATCGGGGTTCGGACCGGGGATACCAAACAACA
TGTCCGCGCCAAGCAGAAAAAGGTCCCGCCGGACATTCTGCTGACCACGC
CGGAAAGCCTGATGTTGCTGCTGTCCTATGACAATGCGCCGGACTATTTC
GCCGACCTTAAATGCGTCGTGATTGATGAGCTGCATAGCTTTTCCACGGG
CAAGCGCGGGGATTTCACGTCCCTAGCCATGGCGCGGCTAAAATCTCTCG
CGCCGGACCATGTGCGCTTCGGACTCTCCGCCACGATTGCCAGCCCGACA
GAAGCCGCGAAATGGCTCGGCCCGACAGACCAGCCGTCAGACCTCATCGA
AGTCATTGGCGACACGCCGCCCGAGCTGGACATCTTGGTCCCGACCGAAA
AGCGCATGCCGCTGGGCGGGCATAATGCGCGTTTCGCCGTGACGGATATT
TACGACGTTATCAAAGGCGCGAATTCTGTCATCGTCTTCGTCAACACCCG
CGCGCAAGCCGAGCTCATGTTTCAAGCGCTGTGGCAAGCGAATGACGACA
ACCTATCGATTGGTCTTTATCACGGCAGTCTCTCACGCGAGCGGCGACAG
AAAACGGAGACTGCGATTGCGTCAGGCATGATGCGCGCCGTTGTCTCCAC
CTCCGCGCTGGAGATGGGGATTGATTGGGGCGATGTGGATGAGATCTTGC
AGATCGGTGCACCCAAAGGAGTCTCCCGATTGCTGCAACGCATCGGGCGG
TCCAATCACCGTATGGACGAGCCGTCAAAGGCCACCCTCGTTCCGTGCAA
TCCGTTGGAAGCCATCGAATGCGCCGTCGCGATTGAAGCGATTGAGGACG
GG
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