mRNA_P-canaliculata_contig10374.515.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Match: A0A6H5L3S3_9PHAE (Fatty acid hydroxylase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3S3_9PHAE) HSP 1 Score: 256 bits (655), Expect = 3.220e-82 Identity = 119/165 (72.12%), Postives = 140/165 (84.85%), Query Frame = 1
Query: 1 AGILAVVATR-LCCSAE--FSLADTAAVPIVALGWSFQEWAIHKYLLHGVEGWMGHEIHERHHEKPYYHVCIDPPDLVASWTIAAACIFRLLLPPPLALTVLATYMIMGLVYEWTHYIAHTRVVPRSRSGKELKRHHTLHHLKDESCWLAFTVPLIDTLLGTVPA 486
AGIL+ VA R L C A LAD AAVP+VA+GWSFQEWAIHKYLLHG++ W+GH++HE HH+KP+YHVC+DPPDLVA WT+AAAC+F+LLLP PLA+TVL YM MGLVYEW H+I HTRVVPRS+ GK+LKRHH LHHLKD++CWLAFT P IDTL GTVP+
Sbjct: 148 AGILSAVALRVLSCGATSPLGLADAAAVPVVAVGWSFQEWAIHKYLLHGLKNWLGHDVHEAHHDKPFYHVCVDPPDLVAGWTLAAACVFKLLLPLPLAITVLVVYMSMGLVYEWVHFIVHTRVVPRSQLGKDLKRHHMLHHLKDDTCWLAFTAPPIDTLFGTVPS 312
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Match: A0A4D9D3N1_9STRA (Fatty acid hydroxylase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3N1_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.470e-44 Identity = 75/157 (47.77%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 91 GWSFQEWAIHKYLLHGVEGWMGHEIHERHHEKPYYHVCIDPPDLVASWTIAAACIFRLLLPPPLALTVLATYMIMGLVYEWTHYIAHTRVVPRSRSGKELKRHHTLHHLKDESCWLAFTVPLIDTLLGTVPACKNSGQLPEARAESTDKFGDGLERR 561
GW QEW +H+ LLH W G EIH +HH P+YHV IDPP +V W A + + +P PL TVL TY MGL YEW H+ HTRV PR+ GK +K HHT HHL DE W AF+ P+ID LGTVPA + G+ +A+ + +G R+
Sbjct: 89 GWILQEWFLHRLLLHSSFDWFGREIHAQHHALPFYHVSIDPPLIVGIWGAIACILGWVFVPQPLVWTVLGTYWTMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLVDERFWFAFSWPMIDASLGTVPAKELEGKEAQAKKAKERREIEGFPRK 245
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Match: W7TJ02_9STRA (Fatty acid hydroxylase-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ02_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.740e-44 Identity = 79/151 (52.32%), Postives = 97/151 (64.24%), Query Frame = 1
Query: 73 VPIVALGWSFQEWAIHKYLLHGVEGWMGHEIHERHHEKPYYHVCIDPPDLVASWTIAAACIFRLLLPPPLALTVLATYMIMGLVYEWTHYIAHTRVVPRSRSGKELKRHHTLHHLKDESCWLAFTVPLIDTLLGTVPACKNSGQLPEARAE 525
V + +GW QEW +H++LLH W G EIH +HH P+YHV IDPP LV W A + + +P PL TVL TY IMGL YEW H+ HTRV PR+ GK +K HHT HHL DE W AF+ P+ID LGTVPA + G+ EARA+
Sbjct: 214 VLLTIVGWILQEWFLHRFLLHSSFDWFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGTVPAKELEGK--EARAK 362
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Match: A0A383WJJ5_TETOB (Fatty acid hydroxylase domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WJJ5_TETOB) HSP 1 Score: 147 bits (370), Expect = 2.060e-40 Identity = 75/162 (46.30%), Postives = 97/162 (59.88%), Query Frame = 1
Query: 37 CSAEFSLADTAAVPIVA----LGWSFQEWAIHKYLLHGVEGWMGHEIHERHHEKPYYHVCIDPPDLVASWTIAAACIFRLLLP-PPLALTVLATYMIMGLVYEWTHYIAHTRVVPRSRSGKELKRHHTLHHLKDESCWLAFTVPLIDTLLGTVPACKNSGQL 507
C+ TAA P+VA L W QEWA HKYLLH W+G IH +HHE PY+H+ +DPP L+ S AAA +F LL PL+LT A Y GL+YEW HY+ HT VP + ++RHH LHH ++E WL+FT P +D GT+P+ +S L
Sbjct: 55 CALRLQQPLTAADPLVAAAVVLLWLVQEWAAHKYLLHSDMDWLGKTIHRQHHETPYFHISLDPPGLILSVMAAAALLFGLLFQWGPLSLTATAAYYSAGLLYEWLHYVVHTHWVPPQGWLRSVRRHHMLHHCRNEDYWLSFTAPAVDAWFGTLPSSASSVPL 216
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Match: A0A7J7QKC3_9CHLO (Fatty acid hydroxylase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QKC3_9CHLO) HSP 1 Score: 147 bits (371), Expect = 3.040e-40 Identity = 79/171 (46.20%), Postives = 100/171 (58.48%), Query Frame = 1
Query: 1 AGILAVVATRLCCSAEFSLADTAAVPIVALGWSFQEWAIHKYLLHGVEGWMGHEIHERHHEKPYYHVCIDPPDLVASWTIAAACIFRLLLP-PPLALTVLATYMIMGLVYEWTHYIAHTRVVPRSRSGKELKRHHTLHHLKDESCWLAFTVPLIDTLLGTVPACKNSGQLP 510
A I + A RL + AD V V L W QEWA HKYLLH WMG IH +HHE PY+HV +DPP L+ S AAA +F LL PL+LT A Y GL+YEW HY+ HT VP + ++RHH LHH ++E WL+FT P +D GT+P ++G +P
Sbjct: 85 AAICGLCAVRL--QQPLTAADPVVVAAVVLLWLVQEWAAHKYLLHSNMDWMGKTIHRQHHETPYFHVSLDPPGLILSVMGAAALLFGLLFQWGPLSLTATAAYYSAGLLYEWLHYVVHTHWVPPQGWLRSVRRHHMLHHCRNEDYWLSFTAPAVDAWFGTLPP--SAGAVP 251
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Match: A0A830H2B6_9CHLO (Fatty acid hydroxylase domain-containing protein n=3 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H2B6_9CHLO) HSP 1 Score: 146 bits (368), Expect = 1.030e-39 Identity = 71/169 (42.01%), Postives = 99/169 (58.58%), Query Frame = 1
Query: 61 DTAAVPIVALGWSFQEWAIHKYLLHGVEGWMGHEIHERHHEKPYYHVCIDPPDLVASWTIAAACIFRLLLPP---PLALTVLATYMIMGLVYEWTHYIAHTRVVPRSRSGKELKRHHTLHHLKDESCWLAFTVPLIDTLLGTVPACKNSGQLPEARAESTDKFGDGLER 558
D VA W FQEW +H++LLH W G +IH HH PYYHV ID P L+ + + +FRL+L P LALT + Y +MGL+YEWTHY+ HT+ VP+S + ++RHH LHH ++E+ +L FT+P +D+L GT P ++ AR+ G R
Sbjct: 133 DVVVAACVASFWLFQEWFVHRWLLHSPFEWFGKDIHVGHHNNPYYHVSIDGPGLIVPAMLTSFVVFRLILFPNNWSLALTGCSVYYVMGLLYEWTHYLVHTKYVPKSSFARAIRRHHMLHHCRNENYYLGFTLPAVDSLFGTAPNPRSIPMTDLARSAPIRSAGTTTSR 301
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Match: A0A1Y1I393_KLENI (Fatty acid hydroxylase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I393_KLENI) HSP 1 Score: 140 bits (353), Expect = 8.470e-37 Identity = 80/162 (49.38%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 1 AGILAVVATRLCCSAEFSLADTAAVPIVALGWSFQEWAIHKYLLHGVEGWMGHEIHERHHEKPYYHVCIDPPDLVASWTIA-AACIFRLLLPPPLALTVLATYMIMGLVYEWTHYIAHTRVVPRSRSGKELKRHHTLHHLKDESCWLAFTVPLIDTLLGTVP 483
A I AV A R + LAD + I+A W+F EW +H LLH W G IH+RHHE P++HV ID DLVA + A F L PLALT T MGLVYEWTHY+ HT+V RS G +KR H HHLKD+ WL+FT P ID L+GT P
Sbjct: 212 AAIAAVAAARS--RFPWRLADGPVIVIMAAWWAFFEWFLHAKLLHSNYNWFGRGIHKRHHEAPFHHVSIDGLDLVAISLVGFAGFCFALFGKSPLALTGTLTVYTMGLVYEWTHYLVHTKVPMRSYIGSMIKRAHVSHHLKDQRYWLSFTCPPIDVLMGTTP 371
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Match: A0A7S4L3W6_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L3W6_GUITH) HSP 1 Score: 137 bits (346), Expect = 1.190e-36 Identity = 71/157 (45.22%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 49 FSLADTAAVPIVALGWSFQEWAIHKYLLHGVEGWMGHEIHERHHEKPYYHVCIDPPDLVASWTIAAACIFRLLLPPPLALTVLATYMIMGLVYEWTHYIAHTRVVPRSRSGKELKRHHTLHHLKDESCWLAFTVPLIDTLLGTVPACKNSGQLPEAR 519
F D + +V W FQEW +HKYLLH + W G E H +HH YY+V IDP LV SW +AA +F LLLP L L+ Y MGL+YE+ HY+AHT+V+P++R + +K HH HH DE W AF+ ID+LL T P+ + ++ AR
Sbjct: 126 FDHLDLLVLALVCQFWMFQEWWLHKYLLHSFK-WWGQEYHHQHHLLDYYYVSIDPVWLVVSWFLAAFGLFYLLLPTDLCLSATFAYSAMGLLYEFCHYLAHTKVMPKNRLLRAIKLHHMKHHFVDEDSWFAFSGLYIDSLLKTAPSGEELVKIRNAR 281
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Match: A0A2P6VIB1_9CHLO (Fatty acid hydroxylase isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VIB1_9CHLO) HSP 1 Score: 136 bits (342), Expect = 6.060e-36 Identity = 80/193 (41.45%), Postives = 97/193 (50.26%), Query Frame = 1
Query: 1 AGILAVVATRLCCSAEFSLADTAAVPIVALGWSFQEWAIHKYLLHGVEGWMGHEIHERHHEKPYYHVCIDPPDLVASWTIAAA--------------------------------CIFRLLLPPPLALTVLATYMIMGLVYEWTHYIAHTRVVPRSRSGKELKRHHTLHHLKDESCWLAFTVPLIDTLLGTVP 483
AG+LAV A R+ S AD VA W QEW +H +LLH W G IHE HH +PY+HV ID P L A+ A+ C FR LALT Y MGL YE+THYIAHTR +PRSR GK ++ HH LHH ++E+ WLAF +P +D L GT P
Sbjct: 61 AGLLAVAAVRVQ-SPVHPAADVGVAAGVAALWCLQEWVVHAWLLHSPFDWAGRRIHEGHHARPYFHVSIDDPPLAAAVMAASPQTPPLSTHALQXXXXXXXXXXXXXXXSLALFWCAFR---GSELALTAALVYYAMGLAYEFTHYIAHTRYLPRSRIGKAIRMHHMLHHTRNEANWLAFVLPAVDALFGTAP 249
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Match: A0A7S4F9Y0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9Y0_CHRCT) HSP 1 Score: 134 bits (337), Expect = 7.540e-35 Identity = 73/153 (47.71%), Postives = 89/153 (58.17%), Query Frame = 1
Query: 49 FSLADTAAVPIVALGWSFQEWAIHKYLLHGVEGWMGHEIHERHHEKPYYHVCIDPPDLVASWTIAAA--CIFRLLLPPPLA--LTVLATYMIMGLVYEWTHYIAHTRVVPRSRSGKELKRHHTLHHLKDESCWLAFTVPLIDTLLGTVPACKN 495
F LAD+ A + A+ W FQEW IH LLH W G +H HHE PYYHVC+D + A W AA + L LA L+ LATY G VYE H++AHT V P R ++ HH HHL ++ WLAFTVP IDTLLGT P+ K+
Sbjct: 176 FRLADSLAAGLTAVAWCFQEWLIHDKLLHSPWNWFGRTVHRWHHELPYYHVCVDQVQIAAPWFAVAATLAVTAGLATAHLAPFLSALATYSACGGVYEACHFLAHTPVRPLPRELGRMRAHHMKHHLINDEYWLAFTVPGIDTLLGTSPSTKS 328 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10374.515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10374.515.1 >prot_P-canaliculata_contig10374.515.1 ID=prot_P-canaliculata_contig10374.515.1|Name=mRNA_P-canaliculata_contig10374.515.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=188bp AGILAVVATRLCCSAEFSLADTAAVPIVALGWSFQEWAIHKYLLHGVEGWback to top mRNA from alignment at P-canaliculata_contig10374:6674..7917- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10374.515.1 ID=mRNA_P-canaliculata_contig10374.515.1|Name=mRNA_P-canaliculata_contig10374.515.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1244bp|location=Sequence derived from alignment at P-canaliculata_contig10374:6674..7917- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10374:6674..7917- >mRNA_P-canaliculata_contig10374.515.1 ID=mRNA_P-canaliculata_contig10374.515.1|Name=mRNA_P-canaliculata_contig10374.515.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1128bp|location=Sequence derived from alignment at P-canaliculata_contig10374:6674..7917- (Pelvetia canaliculata dioecious)back to top |