mRNA_P-canaliculata_contig10369.511.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig10369.511.1
Unique NamemRNA_P-canaliculata_contig10369.511.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
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BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Match: A0A6H5KIW5_9PHAE (Aqp protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIW5_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 7.450e-61
Identity = 97/148 (65.54%), Postives = 116/148 (78.38%), Query Frame = 1 
Query:    1 QMLGALTGAAIATIFLGSTSGGYNAIQEGFEAKNALGGEILCTFLLVLTVFASSDGELGRFNTFTGPLVPWAVGMAVLLAHLILVPIDGCSINPARSFATAVTNNEWDDHWVFWVGPLLGGALATLVWEAVLRPAQRVEPTKSEKEFV 444
            QM GA  GA IA+ +L +T GG+NA+ +   A +A G E+LCTFLLV+TVFA+ DGELGR    TGPL+P  +GMAVLLAHL+L+PIDG SINPARSFATAVTNNEW DHWVFWVGPLLGG LAT+ WEA+LRP Q VE  K+  + +
Sbjct:  129 QMAGATAGAGIASTYLSTTRGGFNALADNVSATDAFGAEVLCTFLLVVTVFAACDGELGRKTAHTGPLLPLVIGMAVLLAHLVLIPIDGASINPARSFATAVTNNEWGDHWVFWVGPLLGGVLATVTWEAILRPDQVVEQEKNVPQAI 276
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BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Match: A0A6H5JZJ3_9PHAE (Aqp protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ3_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 2.150e-56
Identity = 93/139 (66.91%), Postives = 110/139 (79.14%), Query Frame = 1 
Query:    1 QMLGALTGAAIATIFLGSTSGGYNAIQEGFEAKNALGGEILCTFLLVLTVFASSDGELGRFNTFTGPLVPWAVGMAVLLAHLILVPIDGCSINPARSFATAVTNNEWDDHWVFWVGPLLGGALATLVWEAVLRPAQRVE 417
            QM G + GA++A  F  +T GG+NAI +G  A  A G E+LCTFLLV+TVF + DGELGR N  TGPL+P  +GMAVL+AHL+L+PIDGCSINPARSFATAV NN+WDDHWVFWVGPLLGG L T  WEA+LRP Q V+
Sbjct:  364 QMAGGVIGASMANSFPSTTGGGFNAIADGVSAIEAFGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHWVFWVGPLLGGVLGTATWEAILRPDQTVD 502
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BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Match: D8LTV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV4_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 2.080e-49
Identity = 79/109 (72.48%), Postives = 91/109 (83.49%), Query Frame = 1 
Query:   91 EAKNALGGEILCTFLLVLTVFASSDGELGRFNTFTGPLVPWAVGMAVLLAHLILVPIDGCSINPARSFATAVTNNEWDDHWVFWVGPLLGGALATLVWEAVLRPAQRVE 417
            +A  A G E+LCTFLLV+TVF + DGELGR N  TGPL+P  +GMAVL+AHL+L+PIDGCSINPARSFATAV NN+WDDHWVFWVGPLLGG L T  WEA+LRP Q V+
Sbjct:  154 QAGEAFGAEVLCTFLLVVTVFTACDGELGRKNAHTGPLLPLVIGMAVLIAHLVLIPIDGCSINPARSFATAVINNKWDDHWVFWVGPLLGGVLGTATWEAILRPDQPVD 262
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BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Match: A0A835YY46_9STRA (Aquaporin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY46_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.090e-37
Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = 1 
Query:    1 QMLGALTGAAIATIF----LGSTSGGYNAIQEGFEAKNALGGEILCTFLLVLTVFASSDGELGRFNTFTGPLVPWAVGMAVLLAHLILVPIDGCSINPARSFATAVTNNEWDDHWVFWVGPLLGGALATLVWEAVLRPAQRVEPTKSEKEFVK 447
            Q LGA+ G  +A          T+GG N +     A  ALGGEILCT+LLV  V  +++  L +       L+PW +GM V+L H  LVP+DGCSINPARSF +A+  N W DHWVFW+GPL+G  +ATL++EA+LRP +     ++E    K
Sbjct:  122 QCLGAIIGVGLACSMSKAHFWETNGGANVVNNQVGAHQALGGEILCTWLLVTVVLCATNPGLQKAYVHQAVLLPWVIGMTVMLCHFTLVPVDGCSINPARSFGSAIITNTWKDHWVFWLGPLIGATIATLLFEAILRPPEPAPKLEAEDPQAK 274
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BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Match: A0A836CE69_9STRA (Transmembrane channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE69_9STRA)

HSP 1 Score: 139 bits (349), Expect = 4.970e-34
Identity = 71/145 (48.97%), Postives = 91/145 (62.76%), Query Frame = 1 
Query:    1 QMLGALTGAAIATIFLGS-----TSGGYNAIQEGFEAKNALGGEILCTFLLVLTVFASSDGELGRFNTFTGP--LVPWAVGMAVLLAHLILVPIDGCSINPARSFATAVTNNEWDDHWVFWVGPLLGGALATLVWEAVLRPAQRV 414
            QM+GA+ G A A +  GS      +GG N +  G  A  AL  EIL T ++ L V      EL      TG   L+P AVG A++LAH++L+PIDGCS+NPARSF  AV + EW D W+FWVGPL+GG +A L+WE +LRP Q V
Sbjct:  145 QMVGAIVGTAFALVIAGSDKFNAVNGGANILAVGVSAGQALFAEILSTAMVCLAVIIGLSSELWHLMEKTGMDILLPIAVGTAIVLAHMVLIPIDGCSVNPARSFGAAVISGEWADMWIFWVGPLIGGLVAILLWELILRPPQEV 289
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BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Match: A0A1Y1I4M6_KLENI (Aquaporin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4M6_KLENI)

HSP 1 Score: 121 bits (304), Expect = 8.370e-29
Identity = 66/145 (45.52%), Postives = 93/145 (64.14%), Query Frame = 1 
Query:    1 QMLGALTGAAIA-----TIFLGSTSGGYNAIQEGFEAKNALGGEILCTFLLVLTVFASSDG--ELGRFNTFTGPLVPWAVGMAVLLAHLILVPIDGCSINPARSFATAVTNNE---WDDHWVFWVGPLLGGALATLVWEAVLRPA 405
            QM+G++ GAAI      T+F   T+GG N +Q G++  +ALG EI+ TF+L+ TVFA++D        +     L P+A+G+AV + HL ++PIDG SINPARSF  AV  N+   WDD W+FWVGP +G  +A  V+E  +R A
Sbjct:   57 QMVGSICGAAIVHAVNKTLF-SQTNGGANFVQPGYDKGDALGVEIIGTFVLITTVFAATDPVRSCREGSPHISALAPFAIGVAVFIVHLAIIPIDGTSINPARSFGPAVIYNKDFVWDDQWIFWVGPGIGALVAVFVYEWFIRGA 200
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BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Match: A0A1U8KQ35_GOSHI (aquaporin PIP1-3-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8KQ35_GOSHI)

HSP 1 Score: 122 bits (305), Expect = 1.500e-28
Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 1 
Query:    1 QMLGALTGAAIATIFLGST-----SGGYNAIQEGFEAKNALGGEILCTFLLVLTVFASSDGELGRFNTFTGPLVPWAVGMAVLLAHLILVPIDGCSINPARSFATAVTNNE---WDDHWVFWVGPLLGGALATLVWEAVLRPAQRVEPTKS 429
            Q LGA+ GA +   F G        GG N +  G+   + LG EI+ TF+LV TVF+++D +    ++    L P  +G AV L HL  +PI G  INPARS   A+  N+   WDDHWVFWVGP +G ALA +  + ++R    +E  KS
Sbjct:   67 QCLGAICGAGVVKGFQGDNRYEMLGGGANVVNHGYTKGDGLGAEIIATFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWVFWVGPFIGAALAAVYHQMIIRAIPEIEMIKS 217
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BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Match: UPI0010A3BC1F (aquaporin PIP2-7-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3BC1F)

HSP 1 Score: 122 bits (307), Expect = 1.930e-28
Identity = 61/140 (43.57%), Postives = 84/140 (60.00%), Query Frame = 1 
Query:    1 QMLGALTGAAIA----TIFLGSTSGGYNAIQEGFEAKNALGGEILCTFLLVLTVFASSDGELGRFNTFTGPLVPWAVGMAVLLAHLILVPIDGCSINPARSFATAVTNNE---WDDHWVFWVGPLLGGALATLVWEAVLR 399
            QM GA+ G  +A    T +     GG N++QEG+    ALG EI+ TF+LV TVF+++D +    ++    L P  +G AV + HL  +P+ G  INPARSF  AV  N    WDDHW+FWVGP++G A A +  E +LR
Sbjct:  132 QMAGAICGTGLAKGFQTAYYDRYGGGANSVQEGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNNDKIWDDHWIFWVGPIIGAAAAAIYHEHILR 271
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BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Match: A0A0B0NJM5_GOSAR (Aquaporin PIP1-2-like protein n=2 Tax=Malvoideae TaxID=214907 RepID=A0A0B0NJM5_GOSAR)

HSP 1 Score: 119 bits (299), Expect = 2.490e-28
Identity = 61/141 (43.26%), Postives = 83/141 (58.87%), Query Frame = 1 
Query:    1 QMLGALTGAAIATIFLGST-----SGGYNAIQEGFEAKNALGGEILCTFLLVLTVFASSDGELGRFNTFTGPLVPWAVGMAVLLAHLILVPIDGCSINPARSFATAVTNNE---WDDHWVFWVGPLLGGALATLVWEAVLR 399
            Q LGA+ GA +   F+G T      GG N++  G+   + LG EI+ TF+LV TVF+++D +    ++    L P  +G AV L HL  +PI G  INPARS   A+  N+   WDDHW+FWVGP +G ALA L    V+R
Sbjct:   42 QCLGAICGAGVVKGFMGKTRYGALGGGANSVNHGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDKGWDDHWIFWVGPFIGAALAALYHVVVIR 182
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BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Match: Q4QX20_9ERIC (Aquaporin 1 (Fragment) n=2 Tax=Aegiceras corniculatum TaxID=59970 RepID=Q4QX20_9ERIC)

HSP 1 Score: 119 bits (298), Expect = 2.560e-28
Identity = 61/141 (43.26%), Postives = 84/141 (59.57%), Query Frame = 1 
Query:    1 QMLGALTGAAIATIFLGST-----SGGYNAIQEGFEAKNALGGEILCTFLLVLTVFASSDGELGRFNTFTGPLVPWAVGMAVLLAHLILVPIDGCSINPARSFATAVTNNE---WDDHWVFWVGPLLGGALATLVWEAVLR 399
            Q LGA+ GA +   F GS+      GG N +Q G+   + LG EI+ TF+LV TVF+++D +    ++    L P  +G AV L HL  +PI G  INPARS   A+  N+   WD+HW+FWVGP +G ALA L  + V+R
Sbjct:   31 QCLGAICGAGVVKGFEGSSRFTIAGGGANVVQPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDQAWDEHWIFWVGPFIGAALAALYHQVVIR 171
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10369.511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIW5_9PHAE7.450e-6165.54Aqp protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A6H5JZJ3_9PHAE2.150e-5666.91Aqp protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LTV4_ECTSI2.080e-4972.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YY46_9STRA3.090e-3745.75Aquaporin n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A836CE69_9STRA4.970e-3448.97Transmembrane channel protein n=1 Tax=Tribonema mi... [more]
A0A1Y1I4M6_KLENI8.370e-2945.52Aquaporin n=1 Tax=Klebsormidium nitens TaxID=10523... [more]
A0A1U8KQ35_GOSHI1.500e-2841.06aquaporin PIP1-3-like n=1 Tax=Gossypium hirsutum T... [more]
UPI0010A3BC1F1.930e-2843.57aquaporin PIP2-7-like n=1 Tax=Prosopis alba TaxID=... [more]
A0A0B0NJM5_GOSAR2.490e-2843.26Aquaporin PIP1-2-like protein n=2 Tax=Malvoideae T... [more]
Q4QX20_9ERIC2.560e-2843.26Aquaporin 1 (Fragment) n=2 Tax=Aegiceras cornicula... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10369contigP-canaliculata_contig10369:2668..5184 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score208.4
Seed ortholog evalue2.4e-51
Seed eggNOG ortholog2880.D8LTV5
Preferred nameMIP
KEGG koko:K09863,ko:K09864,ko:K09865,ko:K09866,ko:K09867,ko:K09868,ko:K09872
KEGG TC1.A.8,1.A.8.11,1.A.8.8
KEGG Pathwayko04924,ko04962,ko04964,ko04970,ko04976,map04924,map04962,map04964,map04970,map04976
GOsGO:0000003,GO:0000302,GO:0000323,GO:0001101,GO:0001568,GO:0001654,GO:0001655,GO:0001656,GO:0001666,GO:0001822,GO:0001944,GO:0002088,GO:0002237,GO:0002790,GO:0003008,GO:0003014,GO:0003091,GO:0003094,GO:0003097,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003779,GO:0005102,GO:0005198,GO:0005212,GO:0005215,GO:0005216,GO:0005217,GO:0005221,GO:0005223,GO:0005253,GO:0005261,GO:0005267,GO:0005326,GO:0005372,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005764,GO:0005768,GO:0005769,GO:0005773,GO:0005783,GO:0005791,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0005887,GO:0005901,GO:0005902,GO:0005903,GO:0005911,GO:0006139,GO:0006163,GO:0006164,GO:0006182,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006820,GO:0006833,GO:0006836,GO:0006855,GO:0006869,GO:0006884,GO:0006915,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007163,GO:0007267,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007565,GO:0007568,GO:0007586,GO:0007588,GO:0007589,GO:0007600,GO:0007601,GO:0008092,GO:0008150,GO:0008152,GO:0008154,GO:0008219,GO:0008284,GO:0008324,GO:0008361,GO:0008509,GO:0008519,GO:0008643,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009314,GO:0009410,GO:0009411,GO:0009414,GO:0009415,GO:0009416,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009605,GO:0009607,GO:0009611,GO:0009612,GO:0009617,GO:0009624,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009887,GO:0009888,GO:0009892,GO:0009914,GO:0009925,GO:0009941,GO:0009987,GO:0009991,GO:0010008,GO:0010015,GO:0010033,GO:0010035,GO:0010038,GO:0010053,GO:0010054,GO:0010226,GO:0010243,GO:0010256,GO:0010466,GO:0010496,GO:0010591,GO:0010592,GO:0010605,GO:0010632,GO:0010634,GO:0010817,GO:0010876,GO:0010941,GO:0010951,GO:0010959,GO:0012501,GO:0012505,GO:0012506,GO:0014070,GO:0014074,GO:0015075,GO:0015077,GO:0015079,GO:0015103,GO:0015112,GO:0015144,GO:0015166,GO:0015168,GO:0015238,GO:0015250,GO:0015267,GO:0015276,GO:0015318,GO:0015669,GO:0015670,GO:0015672,GO:0015696,GO:0015698,GO:0015701,GO:0015706,GO:0015711,GO:0015718,GO:0015721,GO:0015722,GO:0015791,GO:0015793,GO:0015833,GO:0015849,GO:0015850,GO:0015893,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016050,GO:0016323,GO:0016324,GO:0018130,GO:0018995,GO:0019222,GO:0019233,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019755,GO:0019899,GO:0019904,GO:0020003,GO:0021537,GO:0021591,GO:0021670,GO:0021700,GO:0022411,GO:0022414,GO:0022600,GO:0022603,GO:0022607,GO:0022622,GO:0022803,GO:0022834,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0022890,GO:0023052,GO:0023061,GO:0030001,GO:0030029,GO:0030036,GO:0030042,GO:0030054,GO:0030072,GO:0030104,GO:0030133,GO:0030135,GO:0030136,GO:0030141,GO:0030154,GO:0030155,GO:0030157,GO:0030162,GO:0030165,GO:0030184,GO:0030185,GO:0030334,GO:0030335,GO:0030424,GO:0030430,GO:0030658,GO:0030659,GO:0030667,GO:0030900,GO:0030950,GO:0030952,GO:0031045,GO:0031090,GO:0031224,GO:0031225,GO:0031226,GO:0031253,GO:0031300,GO:0031301,GO:0031302,GO:0031303,GO:0031323,GO:0031324,GO:0031344,GO:0031346,GO:0031410,GO:0031526,GO:0031625,GO:0031667,GO:0031668,GO:0031960,GO:0031965,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032127,GO:0032268,GO:0032269,GO:0032496,GO:0032501,GO:0032502,GO:0032526,GO:0032535,GO:0032809,GO:0032835,GO:0032870,GO:0032879,GO:0032940,GO:0032941,GO:0032984,GO:0032991,GO:0033036,GO:0033267,GO:0033326,GO:0033363,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0033762,GO:0033993,GO:0034219,GO:0034220,GO:0034599,GO:0034614,GO:0034641,GO:0034644,GO:0034654,GO:0035295,GO:0035377,GO:0035378,GO:0035379,GO:0035690,GO:0035821,GO:0036293,GO:0036294,GO:0036477,GO:0040007,GO:0040012,GO:0040017,GO:0042044,GO:0042045,GO:0042060,GO:0042127,GO:0042221,GO:0042383,GO:0042476,GO:0042493,GO:0042538,GO:0042542,GO:0042592,GO:0042594,GO:0042631,GO:0042802,GO:0042886,GO:0042891,GO:0042981,GO:0042995,GO:0043005,GO:0043010,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043230,GO:0043231,GO:0043269,GO:0043270,GO:0043281,GO:0043434,GO:0043624,GO:0043627,GO:0043656,GO:0043657,GO:0043679,GO:0043855,GO:0043933,GO:0044057,GO:0044058,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044241,GO:0044249,GO:0044271,GO:0044281,GO:0044297,GO:0044298,GO:0044306,GO:0044389,GO:0044403,GO:0044419,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044434,GO:0044435,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044853,GO:0045121,GO:0045177,GO:0045178,GO:0045202,GO:0045765,GO:0045766,GO:0045785,GO:0045861,GO:0046068,GO:0046390,GO:0046483,GO:0046541,GO:0046658,GO:0046677,GO:0046683,GO:0046688,GO:0046689,GO:0046691,GO:0046717,GO:0046873,GO:0046875,GO:0046877,GO:0046878,GO:0046879,GO:0046903,GO:0046942,GO:0048145,GO:0048146,GO:0048364,GO:0048468,GO:0048469,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048588,GO:0048589,GO:0048592,GO:0048593,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050878,GO:0050886,GO:0050891,GO:0050896,GO:0050953,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051179,GO:0051181,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051259,GO:0051260,GO:0051261,GO:0051262,GO:0051270,GO:0051272,GO:0051289,GO:0051290,GO:0051291,GO:0051336,GO:0051346,GO:0051384,GO:0051458,GO:0051591,GO:0051592,GO:0051702,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0051851,GO:0051924,GO:0051928,GO:0052547,GO:0052548,GO:0052652,GO:0055037,GO:0055038,GO:0055044,GO:0055085,GO:0055086,GO:0060255,GO:0060322,GO:0060429,GO:0060456,GO:0060491,GO:0060548,GO:0060560,GO:0060986,GO:0061326,GO:0061437,GO:0061440,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0065010,GO:0070062,GO:0070293,GO:0070295,GO:0070301,GO:0070382,GO:0070482,GO:0070633,GO:0070887,GO:0071214,GO:0071229,GO:0071236,GO:0071241,GO:0071248,GO:0071260,GO:0071280,GO:0071288,GO:0071300,GO:0071310,GO:0071320,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071453,GO:0071456,GO:0071462,GO:0071466,GO:0071470,GO:0071472,GO:0071474,GO:0071478,GO:0071482,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071731,GO:0071732,GO:0071804,GO:0071805,GO:0071840,GO:0071944,GO:0072001,GO:0072006,GO:0072009,GO:0072012,GO:0072014,GO:0072019,GO:0072020,GO:0072022,GO:0072032,GO:0072044,GO:0072070,GO:0072073,GO:0072080,GO:0072170,GO:0072205,GO:0072207,GO:0072210,GO:0072220,GO:0072224,GO:0072229,GO:0072230,GO:0072232,GO:0072234,GO:0072236,GO:0072237,GO:0072239,GO:0072243,GO:0072358,GO:0072359,GO:0072488,GO:0072521,GO:0072522,GO:0080090,GO:0080147,GO:0080170,GO:0085018,GO:0090066,GO:0090407,GO:0090558,GO:0090596,GO:0090627,GO:0097159,GO:0097205,GO:0097237,GO:0097305,GO:0097327,GO:0097366,GO:0097435,GO:0097458,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098791,GO:0098793,GO:0098805,GO:0098857,GO:0098858,GO:0098862,GO:0099094,GO:0099402,GO:0099503,GO:0104004,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120038,GO:0150034,GO:1901135,GO:1901137,GO:1901293,GO:1901342,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901618,GO:1901652,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902743,GO:1902745,GO:1903561,GO:1904018,GO:1905392,GO:1990349,GO:2000026,GO:2000116,GO:2000117,GO:2000145,GO:2000147
EggNOG free text desc.water channel activity
EggNOG OGsCOG0580@1,KOG0223@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04147
Hectar predicted targeting categorysignal peptide
Exons4
Model size1255
Cds size459
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10369.511.1prot_P-canaliculata_contig10369.511.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig10369 2671..4391 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815607.2160864-UTR-P-canaliculata_contig10369:2667..26701622815607.2160864-UTR-P-canaliculata_contig10369:2667..2670Pelvetia canaliculata dioeciousUTRP-canaliculata_contig10369 2668..2670 +
1693494163.0971029-UTR-P-canaliculata_contig10369:2667..26701693494163.0971029-UTR-P-canaliculata_contig10369:2667..2670Pelvetia canaliculata dioeciousUTRP-canaliculata_contig10369 2668..2670 +
1622815607.2830703-UTR-P-canaliculata_contig10369:4391..51841622815607.2830703-UTR-P-canaliculata_contig10369:4391..5184Pelvetia canaliculata dioeciousUTRP-canaliculata_contig10369 4392..5184 +
1693494163.1543012-UTR-P-canaliculata_contig10369:4391..51841693494163.1543012-UTR-P-canaliculata_contig10369:4391..5184Pelvetia canaliculata dioeciousUTRP-canaliculata_contig10369 4392..5184 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815607.22893-CDS-P-canaliculata_contig10369:2670..27601622815607.22893-CDS-P-canaliculata_contig10369:2670..2760Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10369 2671..2760 +
1693494163.1196117-CDS-P-canaliculata_contig10369:2670..27601693494163.1196117-CDS-P-canaliculata_contig10369:2670..2760Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10369 2671..2760 +
1622815607.2425885-CDS-P-canaliculata_contig10369:3581..37261622815607.2425885-CDS-P-canaliculata_contig10369:3581..3726Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10369 3582..3726 +
1693494163.1306531-CDS-P-canaliculata_contig10369:3581..37261693494163.1306531-CDS-P-canaliculata_contig10369:3581..3726Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10369 3582..3726 +
1622815607.2579749-CDS-P-canaliculata_contig10369:3967..40611622815607.2579749-CDS-P-canaliculata_contig10369:3967..4061Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10369 3968..4061 +
1693494163.1391327-CDS-P-canaliculata_contig10369:3967..40611693494163.1391327-CDS-P-canaliculata_contig10369:3967..4061Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10369 3968..4061 +
1622815607.2713552-CDS-P-canaliculata_contig10369:4261..43911622815607.2713552-CDS-P-canaliculata_contig10369:4261..4391Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10369 4262..4391 +
1693494163.1464856-CDS-P-canaliculata_contig10369:4261..43911693494163.1464856-CDS-P-canaliculata_contig10369:4261..4391Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10369 4262..4391 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10369.511.1

>prot_P-canaliculata_contig10369.511.1 ID=prot_P-canaliculata_contig10369.511.1|Name=mRNA_P-canaliculata_contig10369.511.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=153bp
MLGALTGAAIATIFLGSTSGGYNAIQEGFEAKNALGGEILCTFLLVLTVF
ASSDGELGRFNTFTGPLVPWAVGMAVLLAHLILVPIDGCSINPARSFATA
VTNNEWDDHWVFWVGPLLGGALATLVWEAVLRPAQRVEPTKSEKEFVKAE
RA*
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mRNA from alignment at P-canaliculata_contig10369:2668..5184+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10369.511.1 ID=mRNA_P-canaliculata_contig10369.511.1|Name=mRNA_P-canaliculata_contig10369.511.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2517bp|location=Sequence derived from alignment at P-canaliculata_contig10369:2668..5184+ (Pelvetia canaliculata dioecious)
CAGATGCTTGGTGCTTTGACCGGCGCCGCCATCGCTACCATCTTCCTGGG
CTCGACTAGCGGCGGCTATAACGCTATCCAAGAAGGCTTCGAAGTGAGTG
CGTACGAGCAAATAAGTCTTTTTTATGAAGGAGCACGGTGCGTTAACTGC
GGCGCTCCAGGTTTTCCGGTATGACTGTTCTACATGTCTTACGGTATTGC
TTTCTAAATTAGCCAGCGACGCTCAAGACAGGTTGTGCGCATACATTTTG
CCCAACGCAAGATAAATCAGAGTGAGGCTTCGAGTTGGCGCCCCATCTTT
ACCCGACGCCAATGCTCCTGTAATCAGTAGTTTCATATACCTTCCGTCAG
CATGTGCATGGAACTACGGCGCTTTCAGTGCAACCCTCATGTTTGCGTCA
AATCATACCCGGTACTTCATTGTTCCTTCACGAGGAAAAATGTCACCAGA
AAAACAATTATTATAGGTGGATCGAGCTTCGTGCTGGGTCGCGAAAACCG
TACGAGTAACGTGCAACCATTATGGAGGCTAGTTTTAGTAATTAGATAAG
GAGTTACATTCTACACCTAAAGTAATAGAATGGGCTCTCTTTGAACCTAA
CAACAAAAACGTCCAATGTCCACGCCCTCAGAAGTCCACCCAAAGTTCCT
GCCGAAGTATACAGGCGTATATAATACAGGTAGCCTCGGTATAGGTTCCG
ACTGCTTGTCTGCTTTGGGCTAGCCGAAATGATATTCGTAGTTGGCCTGG
TGTAAACGGTTCCCCGATGGCAATGACTAAAGCATTTTATGTTTTGGCCA
CCGTTGCAGGAATACGTTAAAATTAAGGAGACATATGACAAGATTTCATG
ATTGCCCCTCTCATCCTTCCCTCCCCCCCCTTCTTCCTCCCCGACCCTTG
GGCCTTGATCGCAGGCCAAAAACGCCTTGGGCGGTGAGATCTTGTGCACG
TTCCTCCTCGTGCTTACCGTCTTCGCCTCCAGTGACGGAGAGCTCGGCCG
TTTCAACACCTTCACCGGGCCCCTCGTCCCCTGGGCCGTTGGCATGGCCG
TCCTCCTGGGTGAGATATCTTACTTTTTTTTTGCGAATATCAATATACTT
CGAATCGCTTGTGTAGTAGGAACGACTCTTTCTTACCCTCTCAAGAGGTT
GAAAACGTTGTATTGCCTTGTGTCGTGGTATGGGTGGCTTCTGGTCAGAG
ACTGGGCGAGCGTTTCCGGCAGGGAATGGTATGAAGTGTGAAAAATAGAC
TCATTTATCTCTAACCCCTCCCCCCCCCAACCTCTCCTATCCTGTCGCAG
CCCACTTGATCTTGGTCCCCATCGACGGCTGCTCCATCAATCCTGCCCGT
TCATTTGCTACTGCCGTTACAAACAACGAGTGGGACGACCACTGGTGAGC
GCAGGGGCATGGCGTGTAGCGAGTCTTCCGACGTTTTTTGTGCGCATCAA
CTGTTGTCCTCACCATGCTTTACGTTTCTGGCCGATGTTGTGCGTCGCAT
GCGATGCGTAAAGGGAAGAATGACACTGTCATATTGGGTCGTTGGGGTCA
AAATGCGCCCGCCTCGTGTGCTGCGTCGTGTGTGCTCTATGCAGGGTGTT
CTGGGTCGGCCCGCTGCTTGGAGGTGCCCTTGCCACCCTTGTTTGGGAGG
CCGTCCTCCGCCCCGCACAGCGCGTGGAGCCTACAAAGTCCGAAAAAGAA
TTCGTGAAGGCAGAGAGAGCGTAAAGAGCTTTCGCCGCATCGAACATGTC
CCCCCCGCTCAGATAGTTTCTTTATTTCCATCGTTCGCTACTGGCGATGC
CATGGTGTTGATCGTGGGAATTTGGGTAAGAAGTGTCAGGGATGATGAGT
TGGGGGTATCGGGAGGCTCAACCCTCCCTACCCAAGACACATCTCGTATT
TCCATTTTTCGCTACTGACCATGTCATGGTGTTAATCCGTGGTGGCTTAG
GTGGCGCAATGTAATGTTAAGGATGGGGTGTTGAGGGTATGTGGATGCTA
AAATCCCTCGGAACGCTCACGTTTCAGTATATCAGTAGACGACGAACGAA
CCTGATTTTTAAAGATTTTCTCTTGTGGGCTAATGCCTTCCGTTATCTTG
ACTAGCCGATTTATACGAGGTAATCGTGTGAAGGTGTCACTGGTTTTGGT
GGAACGCACTGTGTAACAAAGGTTGAGTGCATCGTAAACTGCTTTCAGTG
TTTTTTTATTTTATGTTTTCATTTATTTATTATTTGTGGGACGTATTCCG
GGGCAGATTAAGGTATCAGCCTCCCAAAATAAAATCCTACAACGCCATCG
GATGATCTGTCTGGCAACATGCATTCATGCGAATGCGAGTGCAGCACTGG
ATGCTGTACAAGTGTACGTAGACAAGTGGAAGACTCGTTCTAGCGTTTGT
GGGCAGAAGGGTACACCGTTGGTTATGCAAGGGCCACCCCCCGCCATCGA
TTACCTTCATACACAGTATTATCTTTCGTAGAAAAAAACATTCATTTGTT
CTTGTTGAGGGACAGGG
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Coding sequence (CDS) from alignment at P-canaliculata_contig10369:2668..5184+

>mRNA_P-canaliculata_contig10369.511.1 ID=mRNA_P-canaliculata_contig10369.511.1|Name=mRNA_P-canaliculata_contig10369.511.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=918bp|location=Sequence derived from alignment at P-canaliculata_contig10369:2668..5184+ (Pelvetia canaliculata dioecious)
ATGCTTGGTGCTTTGACCGGCGCCGCCATCGCTACCATCTTCCTGGGCTC
GACTAGCGGCGGCTATAACGCTATCCAAGAAGGCTTCGAAATGCTTGGTG
CTTTGACCGGCGCCGCCATCGCTACCATCTTCCTGGGCTCGACTAGCGGC
GGCTATAACGCTATCCAAGAAGGCTTCGAAGCCAAAAACGCCTTGGGCGG
TGAGATCTTGTGCACGTTCCTCCTCGTGCTTACCGTCTTCGCCTCCAGTG
ACGGAGAGCTCGGCCGTTTCAACACCTTCACCGGGCCCCTCGTCCCCTGG
GCCGTTGGCATGGCCGTCCTCCTGGGCCAAAAACGCCTTGGGCGGTGAGA
TCTTGTGCACGTTCCTCCTCGTGCTTACCGTCTTCGCCTCCAGTGACGGA
GAGCTCGGCCGTTTCAACACCTTCACCGGGCCCCTCGTCCCCTGGGCCGT
TGGCATGGCCGTCCTCCTGGCCCACTTGATCTTGGTCCCCATCGACGGCT
GCTCCATCAATCCTGCCCGTTCATTTGCTACTGCCGTTACAAACAACGAG
TGGGACGACCACTGCCCACTTGATCTTGGTCCCCATCGACGGCTGCTCCA
TCAATCCTGCCCGTTCATTTGCTACTGCCGTTACAAACAACGAGTGGGAC
GACCACTGGGTGTTCTGGGTCGGCCCGCTGCTTGGAGGTGCCCTTGCCAC
CCTTGTTTGGGAGGCCGTCCTCCGCCCCGCACAGCGCGTGGAGCCTACAA
AGTCCGAAAAAGAATTCGTGAAGGCAGAGAGAGCGTAAGGTGTTCTGGGT
CGGCCCGCTGCTTGGAGGTGCCCTTGCCACCCTTGTTTGGGAGGCCGTCC
TCCGCCCCGCACAGCGCGTGGAGCCTACAAAGTCCGAAAAAGAATTCGTG
AAGGCAGAGAGAGCGTAA
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