mRNA_P-canaliculata_contig103284.468.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A518ERX0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518ERX0_9BACT) HSP 1 Score: 303 bits (777), Expect = 1.210e-95 Identity = 161/305 (52.79%), Postives = 194/305 (63.61%), Query Frame = 1
Query: 1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARP----DSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLE----ALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDG 891
G++FLHGL GPDGIK G VEAKPWYW YEVASHPFDIAA + EWRR+ APRA A+ SWRAWL HL G+ SH G P SYQC FFWAAHACWIAR LPELE+A AE +GP ++RHF+DVDL R+++P + W+RG RPPGNAFHGSP GGG++RV +GR+LF FGRRP AAWSG QG GW+ G ADL+FSGWLMRNRWR G L+ A P++ + +L+ + VS++FDR L VQ+D V + FA DG
Sbjct: 269 GIEFLHGLLGPDGIKTGAVEAKPWYWTGSYEVASHPFDIAALSQEWRRTRAPRAASALRASWRAWLHHLGADGKLISHDSRYGGAVDGPIRRAKSYQCPFFWAAHACWIARSLPELEAAF-AEPQGPIT--------------HESSVRHFRDVDLARIETPDVVAWVRGHRPPGNAFHGSPSGGGLLRVFYRPSGRNLFLADRFGRRPFAAWSGAQGVPSWGRGWRAGSADLRFSGWLMRNRWRTGNTLKEKSAAFALPIQALKGGVLDFGSSVVSSSFDRGSWLEVQDD-EVRLAGPFARPDG 557
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A523PUE7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PUE7_9BACT) HSP 1 Score: 236 bits (601), Expect = 8.600e-70 Identity = 134/299 (44.82%), Postives = 170/299 (56.86%), Query Frame = 1
Query: 1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGAA 897
GLDFL LQGPDG K G VEAKPWYWGA YEVAS+PFD+ A +A WR R R++RA++ HL PSGEP SH+P G G R SYQC+ FWA H W+AR + +LE L + E T EG L+ S+ + D LVRL+ ++ W+RG RP N HGSP G G++RV G D+ G EA WSG G F P GW+ G +++F+ WL R WRGG +ALL P R R +L AG V +AF +P+ + G V + SR A RDG +
Sbjct: 254 GLDFLLALQGPDGTKCGLVEAKPWYWGATYEVASNPFDVYALSAGWRHFGHARLAAGAERAFRAFVRHLGPSGEPCSHMP---GPG-RTKSYQCATFWAGHCSWLARSMVDLERILTLADAA-EASTGEG-LELSV--------AAWPDASLVRLEDGAVTAWVRGARPGFNVHHGSPHGAGLLRVWSKARGADVLERCRLGGANEAEWSGALGGFAPARGWRSGGKEVRFALWLARIHWRGGRVQDALLAPARVFARGVLAFAGPRVGSAFHLAPETRIDGPG-VTLASRLARRDGTS 537
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A518BK75_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BK75_9BACT) HSP 1 Score: 235 bits (600), Expect = 1.690e-69 Identity = 139/305 (45.57%), Postives = 169/305 (55.41%), Query Frame = 1
Query: 1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAA--------EWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDG 891
GLDFL GLQGPDG+K G VEAKPWYWGA YEVASHPFD+ A +W R+A R+ R W HL G+PTSH P G G R SYQC FWA HACW AR LPEL +A D T+EG + P++R F + + RL+ + W+RG RP N HGSPLG G++RV + +GR+L G A WSG G P GW+ G +L+FS WL R R G AL PL ARR IL A VS+AFD P++ + + G V + SR AHRDG
Sbjct: 263 GLDFLAGLQGPDGVKCGLVEAKPWYWGATYEVASHPFDVFTLARGGALFGRDDWLRAAR--------RAHRVWGDHLTGDGQPTSHRP---GPG-RGRSYQCPLFWAGHACWAARALPELSAASD---------TDEGQVQ--------PSVRWFAEAQVARLEDACVVAWVRGARPRPNVHHGSPLGAGLLRVVERGSGRELLPRCRLGGHNLAEWSGLAGHLAPARGWRAGGEELRFSLWLARVEARAGRLGSALRTPLAVARRGILAFAHPRVSSAFDAEPEVDLIDHGLV-VRSRLAHRDG 537
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A7Y5UU34_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5UU34_9PLAN) HSP 1 Score: 228 bits (581), Expect = 2.170e-67 Identity = 134/301 (44.52%), Postives = 161/301 (53.49%), Query Frame = 1
Query: 4 LDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESA---LDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGAA 897
LDF L GPDG+K G VEAKPWYWGA YEVASH FD+ A W+ PR A LR++R W HLLP+G+P SH A R SYQC FWA HA WIAR LPEL A ++ RGP G +D S+ R F D L RL+ + W+RG RPP N HGSP G G++RV G +L E WSG GS GW G +++FS WL+RN RG A PL T R +L+ A VS+AFDR P +SV +G V + S A R G A
Sbjct: 252 LDFTEALHGPDGLKCGLVEAKPWYWGAEYEVASHVFDVYALLRGWKLFGEPRFARAALRAFRTWSEHLLPTGQPRSHFDAPG----RTKSYQCPVFWACHAEWIARVLPELVEASAKVELNPRGPGAG-----IDLSI--------RWFPDAQLARLEDDRVVAWVRGARPPYNVHHGSPHGAGLLRVVRKLDGANLLARQRLAATQEGEWSGHAGSSSLARGWSHGAKEMRFSLWLVRNHARGRRLGLAARAPLETLRHGVLDFASREVSSAFDRGPVVSVDGEG-VTVESTLALRGGGA 534
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A521K5V1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K5V1_9BACT) HSP 1 Score: 226 bits (575), Expect = 7.050e-66 Identity = 132/300 (44.00%), Postives = 164/300 (54.67%), Query Frame = 1
Query: 1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPT-LRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGAA 897
GL+F LQGPDG K G VEAKPWYWGA YEVASH FD+ A A W PR A +WRAW++HL +G+P SH+P G G R SYQC FWAAHA W+AR + L ALD G G L G +R + + F LVRL+ + W+RG RP N HGSP G G+++V G +L EA W+G GS GW GK +L+F+ WL R R G L AL PLR RR +L A VS+AF +P +++ DG V + S A RDG+A
Sbjct: 260 GLEFTCALQGPDGKKCGLVEAKPWYWGATYEVASHVFDVHALARGWEIFGRPRYGAAAANAWRAWVAHLSSAGQPASHMP---GPG-RGRSYQCPLFWAAHAAWVARAIKPLACALDRFPPG-------GALPGKHERSSIDLEITWFPRAQLVRLEDARVVAWVRGARPGSNVHHGSPQGAGLLQVVRKTDGAELVERCRMRGAQEAEWNGVAGSMSLARGWNSGKDELRFAFWLARVEARAGRRLTALAVPLRVLRRGVLAYAQADVSSAFALAPHVTLLSDG-VELQSSLAWRDGSA 547
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A518D073_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D073_9BACT) HSP 1 Score: 223 bits (569), Expect = 7.880e-65 Identity = 143/306 (46.73%), Postives = 167/306 (54.58%), Query Frame = 1
Query: 1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWR----RSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAG---RDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGAA 897
GL FL GL GPDGIK G +EAKPWYWGA EVAS+PFD+ A +A R RSA R+A RS AW+ HL PSG PTSH P G G R SYQC+ FWAAHACW AR L + E P+V +D P L F D +L R D+P L W+RG RPPGNA HGSP G G IRV R+ G W+G +G PR GW+ G AD +FS WL R WR GA L+AL EPLR RR +L A VS+ F R V D + + + A RDG A
Sbjct: 262 GLRFLEGLVGPDGIKCGLLEAKPWYWGAGEEVASNPFDVHALSAGARTFDERSA--ERRLAARRSLAAWIEHLEPSGRPTSHRP---GPG-RGRSYQCATFWAAHACWAARALRDWP-----ETDAPDV----------VD-PGATGLTWFADAELARFDAPGLVAWVRGARPPGNAMHGSPCGNGPIRVVALDPDGRWREQLPRCRLGGANSGEWNGVRGPISPRRGWRAGGADQRFSLWLARVAWRRGARLDALAEPLRHLRRDVLAFAHPRVSSGFARQVASRVDGD-VLELTAALAWRDGTA 544
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A800MCV3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800MCV3_9BACT) HSP 1 Score: 223 bits (567), Expect = 8.120e-65 Identity = 136/300 (45.33%), Postives = 165/300 (55.00%), Query Frame = 1
Query: 1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLF--NPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGA 894
G+DFL GL GPDGIK G VEAKPWY GA+YEVASHPFD+ A R AML S+ +W HLLPSG+P SH+P R SYQC FWAAHA W+AR LP LE A +A + + EVP+ R F+D LVRL+S LS W+RG RP GN HGS LG G+IRV D AG++L NP A + E W GR G R W +A+L+FS WL RN RG A+ P IL VS++ DR L + +G V + AH DG+
Sbjct: 253 GIDFLLGLMGPDGIKAGLVEAKPWYHGANYEVASHPFDLYALGVGLVHLKDARCASAMLASFSSWSRHLLPSGQPQSHLPGPD----RSSSYQCPMFWAAHASWVARALPMLEEAANAPSS----------------KAEVPSTRLFRDTGLVRLESATLSAWVRGPRPAGNLHHGSLLGAGLIRVVD-MAGQELLTRNPRAASQ--EGEWHGRSGLPRWPAAWGANRAELRFSLWLARNALRGRELSRAMGIPWGVFCAGILGYGSPVVSSSSDRQATLELLPEG-VRVRGVLAHMDGS 528
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A2D6HF59_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HF59_9BACT) HSP 1 Score: 213 bits (541), Expect = 5.880e-61 Identity = 132/297 (44.44%), Postives = 156/297 (52.53%), Query Frame = 1
Query: 1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDG 891
GL FL L GPDGIK G VEAKPWYWGA YEVASHPFD A A WR A + S+RAW +HL G SH P G G R SYQC FWA HA W+AR +LE+ L R P VG G D V +RHF D L R++ + W+RG+RP N HGSP G G++RV G +L G EA WSG +G PR GW+ G +L+FS WL R R EAL P R R + A VS+AF +P L V DG + + A RDG
Sbjct: 259 GLAFLSALTGPDGIKCGLVEAKPWYWGATYEVASHPFDTFALARGWRHFGGEELADAAVASFRAWAAHLDADGRLGSHRP---GPG-RGRSYQCPVFWAGHAMWMARAAEDLEAIL---RRPPAVGA------GDRD---VVRVRHFSDASLARIEDGAIVAWVRGRRPGVNVHHGSPHGAGLLRVVRRADGAELLERCRLGGSQEAEWSGCRGLPSPRRGWRAGGRELRFSLWLARVHLRARRFGEALRTPWRVLLRGVAAFAHPRVSSAFALAPALQVDTDGVL-LRGPLAWRDG 538
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A7C7YU63_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7YU63_9BACT) HSP 1 Score: 201 bits (512), Expect = 8.780e-57 Identity = 118/296 (39.86%), Postives = 155/296 (52.36%), Query Frame = 1
Query: 4 LDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDG 891
++F L GPDGIK G +EAKPWY+GA YEV+SHPFD A ++ + + + +RAW HL G P SH+ A + SYQC FWA HA W+AR ELE+A GP G P ++ F+D LVRL+ + W+RG+RP N HGSP GGG++RV G DL F E WSG+ G P GW+ G +L+FS WL R WR G ALL P + RRA+ + A VS++ P+L + DG V + + AHR G
Sbjct: 254 VEFQSALTGPDGIKCGLLEAKPWYFGAVYEVSSHPFDGYTLARGFQLTGEEQLARDGVACFRAWARHLDDEGAPRSHLAAVSSRR----SYQCPVFWAGHAAWLARAAGELEAAFAVAEAGPPGGG-------------APRVQFFEDAALVRLEDDCVVAWVRGRRPAYNHAHGSPHGGGLLRVVRKSDGLDLCPRRPFAGLQEGEWSGKSGVLAPARGWRAGAHELRFSLWLARVHWRAGRFGAALLAPANSFRRALWDFAQPLVSSSLGLDPELELV-DGGVRLRVQLAHRGG 531
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A2D5W514_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W514_9BACT) HSP 1 Score: 193 bits (490), Expect = 1.710e-53 Identity = 119/279 (42.65%), Postives = 146/279 (52.33%), Query Frame = 1
Query: 1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLS 837
GL+FL GLQGPDG K G VEAKPWYWGA EVASHPFD+ AFA WR +A R++RAW+ L G P SH P +G G SYQC FFWA+H WIAR +L AL+ P P+L+ F+D L RL++ L W+RG RP +A HGSPLG G+I V GR+L P G+ WSGR G F + G L+FS WL RN R AL P AR+ L VS+A+ + +S
Sbjct: 274 GLEFLLGLQGPDGRKCGLVEAKPWYWGADSEVASHPFDVYAFARGWRHFGRRDFGLAAARAFRAWVELLDRDGAPASHAPG-SGHGR---SYQCPFFWASHGAWIARAGADLSRALELAEPAPAP----------------PSLQLFRDTQLARLENEQLVAWVRGARPAWSALHGSPLGSGLISVRARVDGRELL-PRGTGQ-----WSGRAGHFSWQRAKLHGAEPLRFSRWLARNHLRCARWGAALAAPCHAARQGALAFGSPRVSSAYATAARIS 526 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig103284.468.1 >prot_P-canaliculata_contig103284.468.1 ID=prot_P-canaliculata_contig103284.468.1|Name=mRNA_P-canaliculata_contig103284.468.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=299bp GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAback to top mRNA from alignment at P-canaliculata_contig103284:77..973+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig103284.468.1 ID=mRNA_P-canaliculata_contig103284.468.1|Name=mRNA_P-canaliculata_contig103284.468.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=897bp|location=Sequence derived from alignment at P-canaliculata_contig103284:77..973+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig103284:77..973+ >mRNA_P-canaliculata_contig103284.468.1 ID=mRNA_P-canaliculata_contig103284.468.1|Name=mRNA_P-canaliculata_contig103284.468.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1794bp|location=Sequence derived from alignment at P-canaliculata_contig103284:77..973+ (Pelvetia canaliculata dioecious)back to top |