mRNA_P-canaliculata_contig103284.468.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig103284.468.1
Unique NamemRNA_P-canaliculata_contig103284.468.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A518ERX0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518ERX0_9BACT)

HSP 1 Score: 303 bits (777), Expect = 1.210e-95
Identity = 161/305 (52.79%), Postives = 194/305 (63.61%), Query Frame = 1
Query:    1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARP----DSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLE----ALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDG 891
            G++FLHGL GPDGIK G VEAKPWYW   YEVASHPFDIAA + EWRR+ APRA  A+  SWRAWL HL   G+  SH     G    P     SYQC FFWAAHACWIAR LPELE+A  AE +GP                   ++RHF+DVDL R+++P +  W+RG RPPGNAFHGSP GGG++RV    +GR+LF    FGRRP AAWSG QG      GW+ G ADL+FSGWLMRNRWR G  L+    A   P++  +  +L+   + VS++FDR   L VQ+D  V +   FA  DG
Sbjct:  269 GIEFLHGLLGPDGIKTGAVEAKPWYWTGSYEVASHPFDIAALSQEWRRTRAPRAASALRASWRAWLHHLGADGKLISHDSRYGGAVDGPIRRAKSYQCPFFWAAHACWIARSLPELEAAF-AEPQGPIT--------------HESSVRHFRDVDLARIETPDVVAWVRGHRPPGNAFHGSPSGGGLLRVFYRPSGRNLFLADRFGRRPFAAWSGAQGVPSWGRGWRAGSADLRFSGWLMRNRWRTGNTLKEKSAAFALPIQALKGGVLDFGSSVVSSSFDRGSWLEVQDD-EVRLAGPFARPDG 557          
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A523PUE7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PUE7_9BACT)

HSP 1 Score: 236 bits (601), Expect = 8.600e-70
Identity = 134/299 (44.82%), Postives = 170/299 (56.86%), Query Frame = 1
Query:    1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGAA 897
            GLDFL  LQGPDG K G VEAKPWYWGA YEVAS+PFD+ A +A WR     R      R++RA++ HL PSGEP SH+P   G G R  SYQC+ FWA H  W+AR + +LE  L   +   E  T EG L+ S+          + D  LVRL+   ++ W+RG RP  N  HGSP G G++RV     G D+      G   EA WSG  G F P  GW+ G  +++F+ WL R  WRGG   +ALL P R   R +L  AG  V +AF  +P+  +   G V + SR A RDG +
Sbjct:  254 GLDFLLALQGPDGTKCGLVEAKPWYWGATYEVASNPFDVYALSAGWRHFGHARLAAGAERAFRAFVRHLGPSGEPCSHMP---GPG-RTKSYQCATFWAGHCSWLARSMVDLERILTLADAA-EASTGEG-LELSV--------AAWPDASLVRLEDGAVTAWVRGARPGFNVHHGSPHGAGLLRVWSKARGADVLERCRLGGANEAEWSGALGGFAPARGWRSGGKEVRFALWLARIHWRGGRVQDALLAPARVFARGVLAFAGPRVGSAFHLAPETRIDGPG-VTLASRLARRDGTS 537          
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A518BK75_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BK75_9BACT)

HSP 1 Score: 235 bits (600), Expect = 1.690e-69
Identity = 139/305 (45.57%), Postives = 169/305 (55.41%), Query Frame = 1
Query:    1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAA--------EWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDG 891
            GLDFL GLQGPDG+K G VEAKPWYWGA YEVASHPFD+   A         +W R+A         R+ R W  HL   G+PTSH P   G G R  SYQC  FWA HACW AR LPEL +A D         T+EG +         P++R F +  + RL+   +  W+RG RP  N  HGSPLG G++RV +  +GR+L      G    A WSG  G   P  GW+ G  +L+FS WL R   R G    AL  PL  ARR IL  A   VS+AFD  P++ + + G V + SR AHRDG
Sbjct:  263 GLDFLAGLQGPDGVKCGLVEAKPWYWGATYEVASHPFDVFTLARGGALFGRDDWLRAAR--------RAHRVWGDHLTGDGQPTSHRP---GPG-RGRSYQCPLFWAGHACWAARALPELSAASD---------TDEGQVQ--------PSVRWFAEAQVARLEDACVVAWVRGARPRPNVHHGSPLGAGLLRVVERGSGRELLPRCRLGGHNLAEWSGLAGHLAPARGWRAGGEELRFSLWLARVEARAGRLGSALRTPLAVARRGILAFAHPRVSSAFDAEPEVDLIDHGLV-VRSRLAHRDG 537          
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A7Y5UU34_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5UU34_9PLAN)

HSP 1 Score: 228 bits (581), Expect = 2.170e-67
Identity = 134/301 (44.52%), Postives = 161/301 (53.49%), Query Frame = 1
Query:    4 LDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESA---LDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGAA 897
            LDF   L GPDG+K G VEAKPWYWGA YEVASH FD+ A    W+    PR   A LR++R W  HLLP+G+P SH  A      R  SYQC  FWA HA WIAR LPEL  A   ++   RGP  G     +D S+        R F D  L RL+   +  W+RG RPP N  HGSP G G++RV     G +L          E  WSG  GS     GW  G  +++FS WL+RN  RG     A   PL T R  +L+ A   VS+AFDR P +SV  +G V + S  A R G A
Sbjct:  252 LDFTEALHGPDGLKCGLVEAKPWYWGAEYEVASHVFDVYALLRGWKLFGEPRFARAALRAFRTWSEHLLPTGQPRSHFDAPG----RTKSYQCPVFWACHAEWIARVLPELVEASAKVELNPRGPGAG-----IDLSI--------RWFPDAQLARLEDDRVVAWVRGARPPYNVHHGSPHGAGLLRVVRKLDGANLLARQRLAATQEGEWSGHAGSSSLARGWSHGAKEMRFSLWLVRNHARGRRLGLAARAPLETLRHGVLDFASREVSSAFDRGPVVSVDGEG-VTVESTLALRGGGA 534          
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A521K5V1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K5V1_9BACT)

HSP 1 Score: 226 bits (575), Expect = 7.050e-66
Identity = 132/300 (44.00%), Postives = 164/300 (54.67%), Query Frame = 1
Query:    1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPT-LRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGAA 897
            GL+F   LQGPDG K G VEAKPWYWGA YEVASH FD+ A A  W     PR   A   +WRAW++HL  +G+P SH+P   G G R  SYQC  FWAAHA W+AR +  L  ALD    G       G L G  +R  +   +  F    LVRL+   +  W+RG RP  N  HGSP G G+++V     G +L          EA W+G  GS     GW  GK +L+F+ WL R   R G  L AL  PLR  RR +L  A   VS+AF  +P +++  DG V + S  A RDG+A
Sbjct:  260 GLEFTCALQGPDGKKCGLVEAKPWYWGATYEVASHVFDVHALARGWEIFGRPRYGAAAANAWRAWVAHLSSAGQPASHMP---GPG-RGRSYQCPLFWAAHAAWVARAIKPLACALDRFPPG-------GALPGKHERSSIDLEITWFPRAQLVRLEDARVVAWVRGARPGSNVHHGSPQGAGLLQVVRKTDGAELVERCRMRGAQEAEWNGVAGSMSLARGWNSGKDELRFAFWLARVEARAGRRLTALAVPLRVLRRGVLAYAQADVSSAFALAPHVTLLSDG-VELQSSLAWRDGSA 547          
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A518D073_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D073_9BACT)

HSP 1 Score: 223 bits (569), Expect = 7.880e-65
Identity = 143/306 (46.73%), Postives = 167/306 (54.58%), Query Frame = 1
Query:    1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWR----RSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAG---RDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGAA 897
            GL FL GL GPDGIK G +EAKPWYWGA  EVAS+PFD+ A +A  R    RSA    R+A  RS  AW+ HL PSG PTSH P   G G R  SYQC+ FWAAHACW AR L +       E   P+V          +D P    L  F D +L R D+P L  W+RG RPPGNA HGSP G G IRV         R+       G      W+G +G   PR GW+ G AD +FS WL R  WR GA L+AL EPLR  RR +L  A   VS+ F R     V  D  + + +  A RDG A
Sbjct:  262 GLRFLEGLVGPDGIKCGLLEAKPWYWGAGEEVASNPFDVHALSAGARTFDERSA--ERRLAARRSLAAWIEHLEPSGRPTSHRP---GPG-RGRSYQCATFWAAHACWAARALRDWP-----ETDAPDV----------VD-PGATGLTWFADAELARFDAPGLVAWVRGARPPGNAMHGSPCGNGPIRVVALDPDGRWREQLPRCRLGGANSGEWNGVRGPISPRRGWRAGGADQRFSLWLARVAWRRGARLDALAEPLRHLRRDVLAFAHPRVSSGFARQVASRVDGD-VLELTAALAWRDGTA 544          
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A800MCV3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800MCV3_9BACT)

HSP 1 Score: 223 bits (567), Expect = 8.120e-65
Identity = 136/300 (45.33%), Postives = 165/300 (55.00%), Query Frame = 1
Query:    1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLF--NPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGA 894
            G+DFL GL GPDGIK G VEAKPWY GA+YEVASHPFD+ A           R   AML S+ +W  HLLPSG+P SH+P       R  SYQC  FWAAHA W+AR LP LE A +A +                 + EVP+ R F+D  LVRL+S  LS W+RG RP GN  HGS LG G+IRV D  AG++L   NP A  +  E  W GR G  R    W   +A+L+FS WL RN  RG     A+  P       IL      VS++ DR   L +  +G V +    AH DG+
Sbjct:  253 GIDFLLGLMGPDGIKAGLVEAKPWYHGANYEVASHPFDLYALGVGLVHLKDARCASAMLASFSSWSRHLLPSGQPQSHLPGPD----RSSSYQCPMFWAAHASWVARALPMLEEAANAPSS----------------KAEVPSTRLFRDTGLVRLESATLSAWVRGPRPAGNLHHGSLLGAGLIRVVD-MAGQELLTRNPRAASQ--EGEWHGRSGLPRWPAAWGANRAELRFSLWLARNALRGRELSRAMGIPWGVFCAGILGYGSPVVSSSSDRQATLELLPEG-VRVRGVLAHMDGS 528          
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A2D6HF59_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HF59_9BACT)

HSP 1 Score: 213 bits (541), Expect = 5.880e-61
Identity = 132/297 (44.44%), Postives = 156/297 (52.53%), Query Frame = 1
Query:    1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDG 891
            GL FL  L GPDGIK G VEAKPWYWGA YEVASHPFD  A A  WR         A + S+RAW +HL   G   SH P   G G R  SYQC  FWA HA W+AR   +LE+ L    R P VG       G  D   V  +RHF D  L R++   +  W+RG+RP  N  HGSP G G++RV     G +L      G   EA WSG +G   PR GW+ G  +L+FS WL R   R     EAL  P R   R +   A   VS+AF  +P L V  DG + +    A RDG
Sbjct:  259 GLAFLSALTGPDGIKCGLVEAKPWYWGATYEVASHPFDTFALARGWRHFGGEELADAAVASFRAWAAHLDADGRLGSHRP---GPG-RGRSYQCPVFWAGHAMWMARAAEDLEAIL---RRPPAVGA------GDRD---VVRVRHFSDASLARIEDGAIVAWVRGRRPGVNVHHGSPHGAGLLRVVRRADGAELLERCRLGGSQEAEWSGCRGLPSPRRGWRAGGRELRFSLWLARVHLRARRFGEALRTPWRVLLRGVAAFAHPRVSSAFALAPALQVDTDGVL-LRGPLAWRDG 538          
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A7C7YU63_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7YU63_9BACT)

HSP 1 Score: 201 bits (512), Expect = 8.780e-57
Identity = 118/296 (39.86%), Postives = 155/296 (52.36%), Query Frame = 1
Query:    4 LDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDG 891
            ++F   L GPDGIK G +EAKPWY+GA YEV+SHPFD    A  ++ +   +     +  +RAW  HL   G P SH+ A +       SYQC  FWA HA W+AR   ELE+A      GP  G               P ++ F+D  LVRL+   +  W+RG+RP  N  HGSP GGG++RV     G DL     F    E  WSG+ G   P  GW+ G  +L+FS WL R  WR G    ALL P  + RRA+ + A   VS++    P+L +  DG V +  + AHR G
Sbjct:  254 VEFQSALTGPDGIKCGLLEAKPWYFGAVYEVSSHPFDGYTLARGFQLTGEEQLARDGVACFRAWARHLDDEGAPRSHLAAVSSRR----SYQCPVFWAGHAAWLARAAGELEAAFAVAEAGPPGGG-------------APRVQFFEDAALVRLEDDCVVAWVRGRRPAYNHAHGSPHGGGLLRVVRKSDGLDLCPRRPFAGLQEGEWSGKSGVLAPARGWRAGAHELRFSLWLARVHWRAGRFGAALLAPANSFRRALWDFAQPLVSSSLGLDPELELV-DGGVRLRVQLAHRGG 531          
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Match: A0A2D5W514_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W514_9BACT)

HSP 1 Score: 193 bits (490), Expect = 1.710e-53
Identity = 119/279 (42.65%), Postives = 146/279 (52.33%), Query Frame = 1
Query:    1 GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSAAPRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAAHACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDVDLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAAFGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALLEPLRTARRAILNPAGNAVSTAFDRSPDLS 837
            GL+FL GLQGPDG K G VEAKPWYWGA  EVASHPFD+ AFA  WR        +A  R++RAW+  L   G P SH P  +G G    SYQC FFWA+H  WIAR   +L  AL+     P                  P+L+ F+D  L RL++  L  W+RG RP  +A HGSPLG G+I V     GR+L  P   G+     WSGR G F  +     G   L+FS WL RN  R      AL  P   AR+  L      VS+A+  +  +S
Sbjct:  274 GLEFLLGLQGPDGRKCGLVEAKPWYWGADSEVASHPFDVYAFARGWRHFGRRDFGLAAARAFRAWVELLDRDGAPASHAPG-SGHGR---SYQCPFFWASHGAWIARAGADLSRALELAEPAPAP----------------PSLQLFRDTQLARLENEQLVAWVRGARPAWSALHGSPLGSGLISVRARVDGRELL-PRGTGQ-----WSGRAGHFSWQRAKLHGAEPLRFSRWLARNHLRCARWGAALAAPCHAARQGALAFGSPRVSSAYATAARIS 526          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig103284.468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A518ERX0_9BACT1.210e-9552.79Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A523PUE7_9BACT8.600e-7044.82Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518BK75_9BACT1.690e-6945.57Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7Y5UU34_9PLAN2.170e-6744.52Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A521K5V1_9BACT7.050e-6644.00Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518D073_9BACT7.880e-6546.73Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A800MCV3_9BACT8.120e-6545.33Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D6HF59_9BACT5.880e-6144.44Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7C7YU63_9BACT8.780e-5739.86Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D5W514_9BACT1.710e-5342.65Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig103284contigP-canaliculata_contig103284:77..973 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size897
Cds size897
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815604.4236865-CDS-P-canaliculata_contig103284:76..9731622815604.4236865-CDS-P-canaliculata_contig103284:76..973Pelvetia canaliculata dioeciousCDSP-canaliculata_contig103284 77..973 +
1693494161.6260827-CDS-P-canaliculata_contig103284:76..9731693494161.6260827-CDS-P-canaliculata_contig103284:76..973Pelvetia canaliculata dioeciousCDSP-canaliculata_contig103284 77..973 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig103284.468.1prot_P-canaliculata_contig103284.468.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig103284 77..973 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig103284.468.1

>prot_P-canaliculata_contig103284.468.1 ID=prot_P-canaliculata_contig103284.468.1|Name=mRNA_P-canaliculata_contig103284.468.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=299bp
GLDFLHGLQGPDGIKVGGVEAKPWYWGAHYEVASHPFDIAAFAAEWRRSA
APRARIAMLRSWRAWLSHLLPSGEPTSHVPAQAGTGARPDSYQCSFFWAA
HACWIARCLPELESALDAENRGPEVGTEEGPLDGSLDRPEVPTLRHFKDV
DLVRLDSPFLSVWIRGKRPPGNAFHGSPLGGGIIRVHDTQAGRDLFNPAA
FGRRPEAAWSGRQGSFRPRIGWQEGKADLKFSGWLMRNRWRGGAPLEALL
EPLRTARRAILNPAGNAVSTAFDRSPDLSVQEDGTVHMVSRFAHRDGAA
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mRNA from alignment at P-canaliculata_contig103284:77..973+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig103284.468.1 ID=mRNA_P-canaliculata_contig103284.468.1|Name=mRNA_P-canaliculata_contig103284.468.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=897bp|location=Sequence derived from alignment at P-canaliculata_contig103284:77..973+ (Pelvetia canaliculata dioecious)
GGTTTGGACTTCCTCCACGGTCTCCAGGGGCCCGACGGGATCAAAGTCGG GGGCGTGGAAGCCAAGCCGTGGTACTGGGGCGCCCATTACGAGGTGGCCT CGCACCCCTTCGACATCGCGGCCTTCGCCGCGGAGTGGCGACGATCCGCT GCGCCCCGCGCGCGTATAGCCATGCTCCGCTCGTGGAGGGCTTGGCTCTC GCACCTTCTCCCCAGCGGCGAACCCACCAGCCACGTCCCGGCCCAGGCGG GAACCGGGGCGCGCCCCGATAGTTACCAGTGCTCGTTCTTCTGGGCGGCC CACGCCTGCTGGATCGCGCGCTGCCTTCCGGAGCTTGAGTCAGCCCTCGA CGCCGAGAATCGAGGGCCAGAAGTAGGAACTGAAGAAGGGCCTCTGGACG GGTCTCTAGACCGGCCCGAGGTGCCCACGCTGCGCCATTTCAAGGACGTA GATCTGGTGCGCTTGGATTCTCCATTCTTGTCCGTGTGGATTCGCGGGAA GCGGCCCCCTGGCAACGCGTTCCACGGCAGTCCCTTGGGCGGCGGCATCA TCCGAGTCCACGACACGCAGGCGGGCCGCGACCTCTTCAACCCAGCGGCG TTCGGGCGTCGCCCCGAAGCCGCTTGGAGTGGGCGACAGGGCTCGTTCCG TCCCCGGATAGGGTGGCAGGAGGGCAAGGCCGACCTGAAGTTTTCGGGAT GGCTGATGCGCAATCGGTGGCGGGGGGGAGCCCCCTTGGAGGCGCTTCTC GAGCCCCTGCGGACGGCCCGCCGTGCGATTCTCAATCCTGCGGGAAACGC CGTCAGCACGGCCTTCGATCGCAGCCCGGACCTCTCCGTCCAAGAAGACG GCACCGTGCATATGGTCTCTCGCTTCGCCCACCGGGACGGGGCGGCG
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Coding sequence (CDS) from alignment at P-canaliculata_contig103284:77..973+

>mRNA_P-canaliculata_contig103284.468.1 ID=mRNA_P-canaliculata_contig103284.468.1|Name=mRNA_P-canaliculata_contig103284.468.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1794bp|location=Sequence derived from alignment at P-canaliculata_contig103284:77..973+ (Pelvetia canaliculata dioecious)
GGTTTGGACTTCCTCCACGGTCTCCAGGGGCCCGACGGGATCAAAGTCGG
GGGCGTGGAAGCCAAGCCGTGGTACTGGGGCGCCCATTACGAGGTGGCCT
CGCACCCCTTCGACATCGCGGCCTTCGCCGCGGAGTGGCGACGATCCGCT
GCGCCCCGCGCGCGTATAGCCATGCTCCGCTCGTGGAGGGCTTGGCTCTC
GCACCTTCTCCCCAGCGGCGAACCCACCAGCCACGTCCCGGCCCAGGCGG
GAACCGGGGCGCGCCCCGATAGTTACCAGTGCTCGTTCTTCTGGGCGGCC
CACGCCTGCTGGATCGCGCGCTGCCTTCCGGAGCTTGAGTCAGCCCTCGA
CGCCGAGAATCGAGGGCCAGAAGTAGGAACTGAAGAAGGGCCTCTGGACG
GGTCTCTAGACCGGCCCGAGGTGCCCACGCTGCGCCATTTCAAGGACGTA
GATCTGGTGCGCTTGGATTCTCCATTCTTGTCCGTGTGGATTCGCGGGAA
GCGGCCCCCTGGCAACGCGTTCCACGGCAGTCCCTTGGGCGGCGGCATCA
TCCGAGTCCACGACACGCAGGCGGGCCGCGACCTCTTCAACCCAGCGGCG
TTCGGGCGTCGCCCCGAAGCCGCTTGGAGTGGGCGACAGGGCTCGTTCCG
TCCCCGGATAGGGTGGCAGGAGGGCAAGGCCGACCTGAAGTTTTCGGGAT
GGCTGATGCGCAATCGGTGGCGGGGGGGAGCCCCCTTGGAGGCGCTTCTC
GAGCCCCTGCGGACGGCCCGCCGTGCGATTCTCAATCCTGCGGGAAACGC
CGTCAGCACGGCCTTCGATCGCAGCCCGGACCTCTCCGTCCAAGAAGACG
GCACCGTGCATATGGTCTCTCGCTTCGCCCACCGGGACGGGGCGGCGGGT
TTGGACTTCCTCCACGGTCTCCAGGGGCCCGACGGGATCAAAGTCGGGGG
CGTGGAAGCCAAGCCGTGGTACTGGGGCGCCCATTACGAGGTGGCCTCGC
ACCCCTTCGACATCGCGGCCTTCGCCGCGGAGTGGCGACGATCCGCTGCG
CCCCGCGCGCGTATAGCCATGCTCCGCTCGTGGAGGGCTTGGCTCTCGCA
CCTTCTCCCCAGCGGCGAACCCACCAGCCACGTCCCGGCCCAGGCGGGAA
CCGGGGCGCGCCCCGATAGTTACCAGTGCTCGTTCTTCTGGGCGGCCCAC
GCCTGCTGGATCGCGCGCTGCCTTCCGGAGCTTGAGTCAGCCCTCGACGC
CGAGAATCGAGGGCCAGAAGTAGGAACTGAAGAAGGGCCTCTGGACGGGT
CTCTAGACCGGCCCGAGGTGCCCACGCTGCGCCATTTCAAGGACGTAGAT
CTGGTGCGCTTGGATTCTCCATTCTTGTCCGTGTGGATTCGCGGGAAGCG
GCCCCCTGGCAACGCGTTCCACGGCAGTCCCTTGGGCGGCGGCATCATCC
GAGTCCACGACACGCAGGCGGGCCGCGACCTCTTCAACCCAGCGGCGTTC
GGGCGTCGCCCCGAAGCCGCTTGGAGTGGGCGACAGGGCTCGTTCCGTCC
CCGGATAGGGTGGCAGGAGGGCAAGGCCGACCTGAAGTTTTCGGGATGGC
TGATGCGCAATCGGTGGCGGGGGGGAGCCCCCTTGGAGGCGCTTCTCGAG
CCCCTGCGGACGGCCCGCCGTGCGATTCTCAATCCTGCGGGAAACGCCGT
CAGCACGGCCTTCGATCGCAGCCCGGACCTCTCCGTCCAAGAAGACGGCA
CCGTGCATATGGTCTCTCGCTTCGCCCACCGGGACGGGGCGGCG
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