mRNA_P-canaliculata_contig10324.464.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Match: D8LRQ6_ECTSI (Methyltransferase type 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ6_ECTSI) HSP 1 Score: 494 bits (1273), Expect = 6.820e-176 Identity = 238/274 (86.86%), Postives = 256/274 (93.43%), Query Frame = 1
Query: 1 QDCVDLMMEKSKRGNEMVASLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFRKVGQLTCFDISKNMLKRTRDAVGDETCAGGGKVNYVLLSQPRLPEELSSSLDFVILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGESGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQYDPSNSYYNRDYLVLVEKP 822
Q+CVD + EKSK GNEMV++LVQSLGSALVYPDAGNF+TNRKLWDNYAAEWEP+ASWVQKMA GSK++RLEVVGDEWS+R++V+RVI DFILPNVT ESNVGEIGCGGGRVT EVFRK GQLTCFDISKNMLKRTRDAVG+ CAGGGKV +VLLSQPRLPE S SLDFVILYDVLVHVDLHITNKY+REIARVLKPGGKAFLSTANFLSPG GWDRF AQDKYSVGGFYFMCPDMVRLML+KAGLRVVREG +DPSNSYYNRDYLVLV+KP
Sbjct: 2 QECVDTLTEKSKAGNEMVSNLVQSLGSALVYPDAGNFDTNRKLWDNYAAEWEPDASWVQKMAQGSKTERLEVVGDEWSTRDDVMRVINDFILPNVTEESNVGEIGCGGGRVTVEVFRKAGQLTCFDISKNMLKRTRDAVGEGVCAGGGKVIFVLLSQPRLPENASDSLDFVILYDVLVHVDLHITNKYIREIARVLKPGGKAFLSTANFLSPG--GWDRFNAQDKYSVGGFYFMCPDMVRLMLDKAGLRVVREGDHDPSNSYYNRDYLVLVQKP 273
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Match: A0A7S2SUS9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUS9_9STRA) HSP 1 Score: 282 bits (722), Expect = 1.630e-91 Identity = 136/269 (50.56%), Postives = 183/269 (68.03%), Query Frame = 1
Query: 31 SKRGNEMVASLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG---GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFRKVGQLTCFDISKNMLKRTRDAVGDETCAGGGKVNYVLLSQPRLPEELSSSLDFVILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGESGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQYDPSNSYYNRDYLVLVEKPEA 828
++ G+ MV L++SL A+VYPDAGNF+TNRKLWD YA EW+P W+Q+M+ S + +VGDEW+ + RV+ DFIL V + V E+G GGGRV V VG L C DIS MLKR RD + T ++++ L+QPR P+ L + FV ++DV VHVDLH+ ++Y+ EI ++L PGGKAF+STAN ++ G GW+RF Q KY+VGGFYF+CPDMV +++K GLR++R DPSN YY+RDYLVLV+KP A
Sbjct: 20 AQEGSPMVLELLKSLNQAVVYPDAGNFDTNRKLWDLYAGEWDPAQPWLQQMSRDVQASLEQDIHIVGDEWAPPTHLDRVVQDFILTEVDSSCQVLEVGSGGGRVAARVAPHVGHLKCADISMEMLKRCRDTLQAHT-----NISFLHLTQPRFPDHLHGTFHFVYVFDVFVHVDLHLIHQYLSEIYKLLVPGGKAFISTANLMTSG--GWERFARQSKYTVGGFYFLCPDMVNRLIDKNGLRILRHADEDPSNVYYSRDYLVLVQKPTA 281
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Match: A0A835Z8T5_9STRA (Methyltransferase type 12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T5_9STRA) HSP 1 Score: 254 bits (650), Expect = 1.390e-80 Identity = 133/292 (45.55%), Postives = 180/292 (61.64%), Query Frame = 1
Query: 49 MVASLVQSLGSALVY-PDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSD--------------------------------RLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFRKVGQLTCFDISKNMLKRTRDAVGDETCAGGGKVNYVLLSQPRLPEELSSSLDFVILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGESGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQYDPS--NSYYNRDYLVLVEK 819
M+A+L++SLG A+VY PDAGN +TNRKLWD YA+EW +ASWVQ MA GS+ VG+EWS+ +E+++V+ +FILP + +S E+GCGGGRV +V+ V L C+DIS ML R A+ AG LL+ P LP + S DF+ +DVLVHVDLH++ +Y+RE+ R L G+AFLS A+ S GW+RF Q K++VGGFYFMCP+MVR ++ KAGLR+VREG + + N YYNRD+L++VEK
Sbjct: 19 MIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAAL---KAAGARNATLQLLTAPALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCS--RLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEK 305
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Match: A0A7S2UUH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUH0_9STRA) HSP 1 Score: 248 bits (634), Expect = 7.710e-79 Identity = 128/274 (46.72%), Postives = 171/274 (62.41%), Query Frame = 1
Query: 49 MVASLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--------GSKS---DRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFRKVGQLTCFDISKNMLKRTRDAVGDETCAGGGKVNYVLLSQPRLPEELSSSLDFVILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGESGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQYDPS-NSYYNRDYLVLVEKPEAIS 834
M SL+ SLGSALVYPD GNF TN+KLW+ YA EW P+ WV+ +A GS S D L+ VG EWS ++ ++ F+ + + V EIGCGGGR+ +V +V ++ C+DISK M+ + A+ + V++ +L +P + DF+ +DV+VH+DLH+ NKY EI R LK GKAF+STAN S G GW RF Q KY+VGGFYF+CP+MVR +L K GLR V+EG + S N Y NRDYLVLVEK + +S
Sbjct: 1 MAMSLINSLGSALVYPDQGNFVTNKKLWNLYAQEWSPSEDWVKDIARPNNSSQDIGSSSNEVDELKFVGQEWSPDTDLEEILQQFVYDYIDEDKLVAEIGCGGGRLAAKVAPRVKKMDCYDISKEMISQAEKALSFLS-----NVDFHILEEPSFSKNCEKLYDFIYCFDVMVHMDLHLINKYFGEIGRALKDDGKAFISTANITSTG--GWARFSKQRKYTVGGFYFLCPEMVRFLLHKNGLRPVKEGPIEESTNVYLNRDYLVLVEKSDEVS 267
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Match: W7TSG7_9STRA (Deacetylase sulfotransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSG7_9STRA) HSP 1 Score: 234 bits (597), Expect = 1.270e-71 Identity = 140/323 (43.34%), Postives = 178/323 (55.11%), Query Frame = 1
Query: 34 KRGNEMVASLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNAS-----------------------WVQKMAGG----SKSD-----RLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFRKVGQLTCFDISKNMLKRTRDAVGDETCAGGGKVNYVLL---SQPRLPEE-------LSSSLDFVILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGESGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQYDPS-------------NSYYNRDYLVLVEK--PEAI 831
+ G +V S++ SL A+VY D GN ETNR+LW+ YA EW N + WVQ+MA SKS L ++G EWSS E++ V+ DFILP +T ES V E+G GGGRV V K +LTC DIS+ ML+ R A+ AG + ++L+ S P LP + L DFV +DVLVHVD+H +REI R+LK GKAFLSTAN LSP +GW RF AQDKY+VGGFYF+ P++V ML K G RVV+ + N YY RDYLV+VEK PE +
Sbjct: 63 REGTSIVRSVINSLSGAMVYTDVGNVETNRRLWNRYAEEWHGNCARNGPYSGSARSPSSELPANKPNVWVQQMAANTAKTSKSTPYSLPALALIGQEWSSPEDLEEVVRDFILPYLTPESAVVEVGVGGGRVAALVLGKCMRLTCLDISERMLEAARTALAAHPAAGATVLEFILVGNDSNPSLPSQRVEYPVSLHGRCDFVYCFDVLVHVDVHTLYHTLREIRRLLKASGKAFLSTANILSP--AGWRRFAAQDKYTVGGFYFVSPEIVHGMLAKVGFRVVQHSEIPEGFKELSDTHGLAKGNLYYGRDYLVVVEKAPPEQM 383
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Match: A0A6A7GCB0_9CRUS (Methyltransferase type 12 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GCB0_9CRUS) HSP 1 Score: 223 bits (568), Expect = 1.670e-68 Identity = 120/285 (42.11%), Postives = 168/285 (58.95%), Query Frame = 1
Query: 16 LMMEKSKR-GNEMVASLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGS-----------KSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFRKVGQLTCFDISKNMLKRTRDAVGDETCAGGGKVNYVLL-----SQPRLPEELSSSLDFVILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGESGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQYDPSNSYYNRDYLVLVEK 819
L+ +SK G + +L+++LG+++VY ++ N N+KLWD YA +W PN WVQ+MA GS K +E +GDEWS R+ L V+ FI+ N+ +V EIG GGGRV + V V L CFD+S MLK +T + V + LL S P P +L+S+ DFV L+DVLVHVD+H Y ++I ++LKP GKA + TAN +P +GW RF Q K+SV GFYF+ PD+V L+L K+G ++ D N Y +RDY V+V K
Sbjct: 15 LISSQSKHDGTSQIRNLLKNLGASVVYEES-NVVANKKLWDIYAKDWSPNKDWVQRMAHGSTESSSTPNIDGKKRGIECLGDEWSDRKSFLEVVDRFIVSNIKKSDSVLEIGSGGGRVASLVCPLVSSLHCFDVSSEMLK-----CAQKTLSKFNNVRFTLLESSTDSPPTFPIKLTSTFDFVYLFDVLVHVDIHTQFNYFQQIFQLLKPDGKALIHTANLCAP--NGWKRFEKQKKFSVAGFYFVTPDLVDLLLAKSGFEIIERSSIDERNVYLSRDYFVVVRK 291
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Match: F0XX81_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX81_AURAN) HSP 1 Score: 222 bits (566), Expect = 2.700e-68 Identity = 121/280 (43.21%), Postives = 167/280 (59.64%), Query Frame = 1
Query: 37 RGNEMVASLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDR--LEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFRKVGQLTCFDISKNMLKRTRDAVGDETCAGGGKVNYVLL------------SQPRL-PEELSSSLDFVILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGESGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVRE-GQYDPSNSYYNRDYLVLVEKPEA 828
+G EMV +VQSL SAL+YP+AGN TN KLWD YA+EW A WV +MA ++ L+ VGDEW+ R RV+ ++IL VT E+ EIG GGGR+ V +V L C D+S ML R A+ G ++ L+ + PR P ++ DFV +DV+VH+D H + +R + +L GG+AF+STAN +P G+ RF Q KYSVGGF+F+ P+ VR++ +KAGL VVRE D SN+YYNRDYL ++ + +A
Sbjct: 15 KGQEMVQQMVQSLSSALIYPEAGNVATNEKLWDVYASEWGKEAPWVVEMAATNRDGAVALDAVGDEWAPRAHTERVVDEWILSEVTPEARCCEIGSGGGRIAALVAPRVASLACCDVSAKMLARAEAALA----GGPAATSFHLVHGDAAPSDAGFGAGPRAYPPTMARGFDFVYCFDVMVHLDAHAMYRCLRRVESLLADGGRAFVSTANLKAP--DGFARFEKQSKYSVGGFFFVTPETVRVLADKAGLAVVRELDAPDASNTYYNRDYLAILARKDA 288
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Match: A0A8J2SCW4_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCW4_9STRA) HSP 1 Score: 228 bits (580), Expect = 6.670e-68 Identity = 122/282 (43.26%), Postives = 171/282 (60.64%), Query Frame = 1
Query: 4 DCVDLMMEKSKRGNEMVASLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKS--DRLEVVGDEWSSREEVLRVIGDFILPNVTTESNVGEIGCGGGRVTTEVFRKVGQLTCFDISKNMLKRTRDAVGDETC---------AGGGKVNYVLLSQPRLPEELSSSLDFVILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGESGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVRE-GQYDPSNSYYNRDYLVLV 813
D + + E + RG+EMV +VQ L AL+YPDAGN +TN KLWD YA+EW A WV MA ++ + LE VGDEW+ RV+ ++IL V+ +++ EIG GGGR+ V +V +L CFD+S ML + A+ + A G + + P+ + DFV +DV+VH+D H + ++ I +LK GKAF+ST+N L+P G+ RF AQ+KYSVGGFYF+ P+ VR ++ +AGLRVVRE D SN+YYNRDYL L+
Sbjct: 4 DTEEYLREAAGRGHEMVQQMVQKLSGALIYPDAGNVQTNEKLWDVYASEWGAEAGWVAGMAASNREAKETLENVGDEWAPAAHTKRVVDEWILSEVSLKTHCCEIGSGGGRIGRMVAPRVSKLQCFDVSAKMLAAAKQALASQENVTFAQIHGDASGADAGFSDKPRHYAPQH-KHAYDFVYCFDVMVHMDAHAMFRCLKRIRALLKDEGKAFISTSNLLAP--DGFRRFEAQEKYSVGGFYFVTPETVRCLVSRAGLRVVRELSAPDASNTYYNRDYLALL 282
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Match: A0A485L136_9STRA (Aste57867_14601 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L136_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.410e-67 Identity = 114/270 (42.22%), Postives = 168/270 (62.22%), Query Frame = 1
Query: 31 SKRGNEMVASLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAGGSKSDRLEVVGDEWSSREEVLRVIGDFILPNVT--TESNVGEIGCGGGRVTTEVFRK--VGQLTCFDISKNMLKRTRDAVGDETCAGGGKVNYVLLSQPRLPEELSSSLDFVILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGESGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQYDPSNSYYNRDYLVLVEKPEA 828
+K +++ ++ SL SA+V PD GN E NR++WD YA +W P A +V M+ S L+V+GDEWS+ ++ V+ F+ P ++ T+ +VGEIG GGGRV V V + C DIS ML+ R +T A ++Y LL Q P+ +SSLDFVI++DV+VH+DLH + ++++ R+L+PGG F STAN +P GW RF Q K+S+GGFYF CP ++ +L + G +V+ G P+N Y NRDYL++V+KP
Sbjct: 2 AKARKDLILDVISSLSSAMVAPDIGNIEGNRRVWDAYAKDWSPTADFVTSMSP-QFSHPLDVLGDEWSTPADLTHVLSTFVFPYLSQSTQVHVGEIGSGGGRVARLVASHPAVSRYVCMDISSEMLEHAR-----KTLASVPHIDYCLLPQTS-PD--ASSLDFVIVFDVMVHMDLHTIYQTLQQVFRLLRPGGHCFFSTANLTAP--DGWARFQKQAKFSIGGFYFTCPQLIDFVLAQCGFEIVQRGAPSPTNMYLNRDYLLVVQKPHV 260
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Match: A0A812TK35_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812TK35_9DINO) HSP 1 Score: 218 bits (556), Expect = 1.540e-66 Identity = 117/274 (42.70%), Postives = 158/274 (57.66%), Query Frame = 1
Query: 16 LMMEKSKRGNEMVASLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASWVQKMAG--GSKSDRLEVVGDEWSSREEVLRVIGDFILPNVTTESN---VGEIGCGGGRVTTEVFRKVGQLTCFDISKNMLKRTRDAVGDETCAGGGKVNYVLL-SQPRLPEELSSSLDFVILYDVLVHVDLHITNKYVREIARVLKPGGKAFLSTANFLSPGESGWDRFIAQDKYSVGGFYFMCPDMVRLMLEKAGLRVVREGQYDPSNSYYNRDYLVLVEK 819
L+ E R N MV L++ L VY DA N ETNRKLWD YA W + +WVQ+M+G ++ L+ VGDEWS E + V+ D++ P++ E V E+G GGGR+ V KV +L CFD+S+ ML R + + G V + L+ PEE + DFV +DV VH+DLH + + + +L+PGG F+S AN L+P GW RF Q KYSVGGFYF+ PD+VR +L AG +VR + N+Y NRD LVL K
Sbjct: 38 LVAESEGRQNPMVLELLKDLQKCAVYTDAPNHETNRKLWDAYAQSWSSDVAWVQRMSGHVSREAAALKFVGDEWSDVESLDAVLSDWLYPHLEDEQKLKTVAEVGSGGGRIAARVAPKVERLVCFDVSEGMLARASSRIAE---LGHRHVEFQLVHGGAPYPEEYHTFFDFVYSFDVFVHMDLHQMRQTLHCVRAILRPGGLCFISFANLLAP--DGWQRFAKQQKYSVGGFYFVSPDIVRCLLTHAGFSLVRMSKPQAGNTYLNRDLLVLARK 306 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10324.464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10324.464.1 >prot_P-canaliculata_contig10324.464.1 ID=prot_P-canaliculata_contig10324.464.1|Name=mRNA_P-canaliculata_contig10324.464.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=273bp MMEKSKRGNEMVASLVQSLGSALVYPDAGNFETNRKLWDNYAAEWEPNASback to top mRNA from alignment at P-canaliculata_contig10324:4054..7410- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10324.464.1 ID=mRNA_P-canaliculata_contig10324.464.1|Name=mRNA_P-canaliculata_contig10324.464.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=3357bp|location=Sequence derived from alignment at P-canaliculata_contig10324:4054..7410- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10324:4054..7410- >mRNA_P-canaliculata_contig10324.464.1 ID=mRNA_P-canaliculata_contig10324.464.1|Name=mRNA_P-canaliculata_contig10324.464.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1638bp|location=Sequence derived from alignment at P-canaliculata_contig10324:4054..7410- (Pelvetia canaliculata dioecious)back to top |