mRNA_P-canaliculata_contig10309.455.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Match: A0A4U0TNR0_9PEZI (60S ribosomal protein L27a n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4U0TNR0_9PEZI) HSP 1 Score: 244 bits (622), Expect = 2.460e-79 Identity = 132/153 (86.27%), Postives = 144/153 (94.12%), Query Frame = 2
Query: 44 TMPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVVNLDKLWSLVPLEQREKYLAKDAKTSGTAPVLDLLPLGYSKVLGKGRLPAGVPLIVRARFFSKDAERKIKENGGVVQLVA 502
TMPTR ++TRKHRGHVSAGHGR+GKHRKHPGGRG+AGGQHHHRTN+DKYXXXXXXXXXXX FHKLQNQFWKPV+NLDKLWSLVP EQREKYLAK +KT TAPVLDL+P+GYSKVLGKGR+P VPLIVRAR+FS+DAERKIKE GGVVQLVA
Sbjct: 63 TMPTRKTQTRKHRGHVSAGHGRIGKHRKHPGGRGLAGGQHHHRTNMDKYXXXXXXXXXXXYFHKLQNQFWKPVINLDKLWSLVPSEQREKYLAKGSKTD-TAPVLDLVPMGYSKVLGKGRIPE-VPLIVRARYFSRDAERKIKEAGGVVQLVA 213
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Match: N1PME0_DOTSN (Ribosomal_L18e/L15P domain-containing protein n=23 Tax=Fungi TaxID=4751 RepID=N1PME0_DOTSN) HSP 1 Score: 240 bits (613), Expect = 6.780e-79 Identity = 131/152 (86.18%), Postives = 138/152 (90.79%), Query Frame = 2
Query: 47 MPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVVNLDKLWSLVPLEQREKYLAKDAKTSGTAPVLDLLPLGYSKVLGKGRLPAGVPLIVRARFFSKDAERKIKENGGVVQLVA 502
MPTR S TRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTN+DKYXXXXXXXXX FHKLQNQFWKPV+NLDKLW+LVP EQREKYLA +K TAPVLDLLPLGYSKVLGKGR+P +PLIVRAR+FSKDAERKIKE GGVVQLVA
Sbjct: 1 MPTRLSNTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNIDKYXXXXXXXXXMRYFHKLQNQFWKPVINLDKLWALVPQEQREKYLAGGSKD--TAPVLDLLPLGYSKVLGKGRIPE-IPLIVRARYFSKDAERKIKEAGGVVQLVA 149
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Match: A0A0F4GML6_9PEZI (60S ribosomal protein L28 n=10 Tax=Eukaryota TaxID=2759 RepID=A0A0F4GML6_9PEZI) HSP 1 Score: 240 bits (612), Expect = 9.620e-79 Identity = 132/152 (86.84%), Postives = 139/152 (91.45%), Query Frame = 2
Query: 47 MPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVVNLDKLWSLVPLEQREKYLAKDAKTSGTAPVLDLLPLGYSKVLGKGRLPAGVPLIVRARFFSKDAERKIKENGGVVQLVA 502
MPTR +KTRKHRGHVSAGHGRVGK RKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXX FHKLQNQFWKPV+NLDKLWSLVP+EQREKYLA K++ TAPVLDLLPLGYSKVLGKGRLP VP+IVRAR+ SKDAERKIKE GGVVQLVA
Sbjct: 1 MPTRLTKTRKHRGHVSAGHGRVGKARKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXMRYFHKLQNQFWKPVINLDKLWSLVPIEQREKYLAN--KSADTAPVLDLLPLGYSKVLGKGRLPQ-VPIIVRARYVSKDAERKIKEAGGVVQLVA 149
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Match: A0A6A7BVZ1_9PEZI (Putative 60S ribosomal protein L27a n=1 Tax=Piedraia hortae CBS 480.64 TaxID=1314780 RepID=A0A6A7BVZ1_9PEZI) HSP 1 Score: 234 bits (598), Expect = 1.390e-76 Identity = 132/152 (86.84%), Postives = 137/152 (90.13%), Query Frame = 2
Query: 47 MPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVVNLDKLWSLVPLEQREKYLAKDAKTSGTAPVLDLLPLGYSKVLGKGRLPAGVPLIVRARFFSKDAERKIKENGGVVQLVA 502
MPTR SKTRKHRGHVSAGHGRVGKHRKHPGGRG+AGGQHHHRTN DK XXXXXXXXXXXX KL N +WKPV+NLDKLWSLVPLEQREKYLAK A + TAPVLDLLPLGYSKVLGKGRLP PLIVRAR+FSKDAERKIKE GGVVQLVA
Sbjct: 1 MPTRLSKTRKHRGHVSAGHGRVGKHRKHPGGRGLAGGQHHHRTNFDKXXXXXXXXXXXXXXXKLGNHYWKPVINLDKLWSLVPLEQREKYLAKGA-SGDTAPVLDLLPLGYSKVLGKGRLPEKCPLIVRARYFSKDAERKIKEAGGVVQLVA 151
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Match: A0A6G1H750_9PEZI (60S ribosomal protein L27a n=1 Tax=Aulographum hederae CBS 113979 TaxID=1176131 RepID=A0A6G1H750_9PEZI) HSP 1 Score: 234 bits (596), Expect = 2.630e-76 Identity = 132/152 (86.84%), Postives = 141/152 (92.76%), Query Frame = 2
Query: 47 MPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVVNLDKLWSLVPLEQREKYLAKDAKTSGTAPVLDLLPLGYSKVLGKGRLPAGVPLIVRARFFSKDAERKIKENGGVVQLVA 502
MPTR SKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTN+DKYXXXXXXXXXXXXFHKLQNQFWKPV+NLDKLWSLVP+E+R++YL K KT APVLDLLPLGY+KVLGKGR+P VPLIVRAR+FSKDAERKIKE GGV QLVA
Sbjct: 1 MPTRFSKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNVDKYXXXXXXXXXXXXFHKLQNQFWKPVINLDKLWSLVPIEKRDEYL-KAGKTD-VAPVLDLLPLGYAKVLGKGRIPE-VPLIVRARYFSKDAERKIKEAGGVCQLVA 149
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Match: A0A6A6YJH1_9PEZI (uncharacterized protein n=3 Tax=Mytilinidiales TaxID=603422 RepID=A0A6A6YJH1_9PEZI) HSP 1 Score: 233 bits (593), Expect = 7.520e-76 Identity = 126/152 (82.89%), Postives = 136/152 (89.47%), Query Frame = 2
Query: 47 MPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVVNLDKLWSLVPLEQREKYLAKDAKTSGTAPVLDLLPLGYSKVLGKGRLPAGVPLIVRARFFSKDAERKIKENGGVVQLVA 502
MPTR +KTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTN+DKYXXXXXXXXX FHKLQNQFWKPV+NLDKLWSLVP E+R+ YLA KT TAPVLDLLPLGYSKVLGKGRLP +P+IV+AR+ SK+AERKI E GGVVQLVA
Sbjct: 1 MPTRLTKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNIDKYXXXXXXXXXMRYFHKLQNQFWKPVINLDKLWSLVPAEKRDAYLA--GKTGDTAPVLDLLPLGYSKVLGKGRLPK-IPIIVKARYVSKEAERKITEAGGVVQLVA 149
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Match: A0A5M8PSE7_9LECA (60S ribosomal protein L27a n=4 Tax=OSLEUM clade TaxID=1520881 RepID=A0A5M8PSE7_9LECA) HSP 1 Score: 232 bits (591), Expect = 1.520e-75 Identity = 126/152 (82.89%), Postives = 142/152 (93.42%), Query Frame = 2
Query: 47 MPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVVNLDKLWSLVPLEQREKYLAKDAKTSGTAPVLDLLPLGYSKVLGKGRLPAGVPLIVRARFFSKDAERKIKENGGVVQLVA 502
MPT SKTRK+RGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPV+NLDKLWSLVP+E+R++YL++ K + T PVLDLLPLGYSKVLGKGR+P +PL+VRARFFS++AERKIKE GG+V+LVA
Sbjct: 1 MPTHLSKTRKYRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVINLDKLWSLVPVEKRDEYLSE--KKTDTVPVLDLLPLGYSKVLGKGRIPE-IPLVVRARFFSREAERKIKEAGGIVELVA 149
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Match: A0A6A6H4I2_9PEZI (60S ribosomal protein L28 n=1 Tax=Viridothelium virens TaxID=1048519 RepID=A0A6A6H4I2_9PEZI) HSP 1 Score: 230 bits (587), Expect = 6.160e-75 Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 2
Query: 47 MPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVVNLDKLWSLVPLEQREKYLAKDAKTSGTAPVLDLLPLGYSKVLGKGRLPAGVPLIVRARFFSKDAERKIKENGGVVQLVA 502
MPTR +KTRKHRGHVSAGHGR+GKHRKHPGGRG+AGGQHHHRTN+DKYXXXXXXXXXXXX HKLQNQFW+PV+NLDKLWSLVP E+R++YL+ + K TAPVLDLLPLGYSKVLGKGRLP VPLIVRARFFS +AERKIKE GGVVQLVA
Sbjct: 1 MPTRKTKTRKHRGHVSAGHGRIGKHRKHPGGRGLAGGQHHHRTNMDKYXXXXXXXXXXXXXHKLQNQFWRPVINLDKLWSLVPAEKRDEYLSGNKKD--TAPVLDLLPLGYSKVLGKGRLPE-VPLIVRARFFSAEAERKIKEAGGVVQLVA 149
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Match: A0A6A6NUD1_9PEZI (Ribosomal protein L22 n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6NUD1_9PEZI) HSP 1 Score: 230 bits (587), Expect = 6.160e-75 Identity = 123/152 (80.92%), Postives = 135/152 (88.82%), Query Frame = 2
Query: 47 MPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVVNLDKLWSLVPLEQREKYLAKDAKTSGTAPVLDLLPLGYSKVLGKGRLPAGVPLIVRARFFSKDAERKIKENGGVVQLVA 502
MPTR +KTRKHRGHVSAGHGR+GKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXX FHKLQNQFWKP +NLDKLWSLVP E R YLA + K TAPVLDLLPLGY+KVLGKGR+P +P++VRAR+FSK+AERKIKE+GG VQLVA
Sbjct: 1 MPTRLTKTRKHRGHVSAGHGRIGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXMRYFHKLQNQFWKPTINLDKLWSLVPSETRTAYLAGEKKD--TAPVLDLLPLGYAKVLGKGRIPE-IPIVVRARYFSKEAERKIKESGGAVQLVA 149
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Match: A0A4U0X1X3_9PEZI (60S ribosomal protein L27a n=1 Tax=Cryomyces minteri TaxID=331657 RepID=A0A4U0X1X3_9PEZI) HSP 1 Score: 230 bits (586), Expect = 8.750e-75 Identity = 128/152 (84.21%), Postives = 139/152 (91.45%), Query Frame = 2
Query: 47 MPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYXXXXXXXXXXXXFHKLQNQFWKPVVNLDKLWSLVPLEQREKYLAKDAKTSGTAPVLDLLPLGYSKVLGKGRLPAGVPLIVRARFFSKDAERKIKENGGVVQLVA 502
MPT SKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTN+DKYXXXXXXXXXXXXFHKLQNQFWKPV+NLDKLWSLVP E+RE+YL + K + TAPVLDLLPLGYSKVLGKGRLP +P++VRAR+FSK AE+KIKE GGV QLVA
Sbjct: 1 MPTHLSKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNVDKYXXXXXXXXXXXXFHKLQNQFWKPVINLDKLWSLVPAEKREQYLVE--KKTDTAPVLDLLPLGYSKVLGKGRLPE-IPIVVRARWFSKLAEKKIKEAGGVCQLVA 149 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10309.455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10309.455.1 >prot_P-canaliculata_contig10309.455.1 ID=prot_P-canaliculata_contig10309.455.1|Name=mRNA_P-canaliculata_contig10309.455.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=153bp MPTRASKTRKHRGHVSAGHGRVGKHRKHPGGRGMAGGQHHHRTNLDKYHPback to top mRNA from alignment at P-canaliculata_contig10309:10975..11701+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10309.455.1 ID=mRNA_P-canaliculata_contig10309.455.1|Name=mRNA_P-canaliculata_contig10309.455.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=727bp|location=Sequence derived from alignment at P-canaliculata_contig10309:10975..11701+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10309:10975..11701+ >mRNA_P-canaliculata_contig10309.455.1 ID=mRNA_P-canaliculata_contig10309.455.1|Name=mRNA_P-canaliculata_contig10309.455.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=918bp|location=Sequence derived from alignment at P-canaliculata_contig10309:10975..11701+ (Pelvetia canaliculata dioecious)back to top |