mRNA_P-canaliculata_contig10304.437.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig10304.437.1
Unique NamemRNA_P-canaliculata_contig10304.437.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
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BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Match: D8LB42_ECTSI (Protein tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB42_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 4.150e-116
Identity = 187/222 (84.23%), Postives = 203/222 (91.44%), Query Frame = 3 
Query:   54 MDGEEEMRHEARMLAKVCNHACVVQFVGVLLRPVPSVVTKFMEEGSVEALLVSSDKPATKKMVVRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDAFHVRISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLFEMSSRSPPWEGHENLDVAYRVCSGERMTVPPSVDALISPLMWSCWDQNPRQRPDFASILTALTEYAAN 719
            ++G+EEMRHEARMLAKVCNH CVVQFVGVLLRPVPSVVT FME GSVE +LVSSDK ATK +V RMAIEAAKGVIHLHREGVVHRDLASRNLLLDD FHVRISDFGFSRVKREC SRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVL+EM +RSPPWEGHENLDVA+RVCSGERMTVPP VD+ ++ LM  CW+++ R RPDFASILTALT +A +
Sbjct:  694 VEGQEEMRHEARMLAKVCNHNCVVQFVGVLLRPVPSVVTMFMENGSVEDMLVSSDKKATKDLVCRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGHENLDVAFRVCSGERMTVPPRVDSPLADLMHKCWNESSRLRPDFASILTALTAFAGD 915
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BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Match: A0A813CZ72_9DINO (Non-specific protein-tyrosine kinase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CZ72_9DINO)

HSP 1 Score: 228 bits (582), Expect = 1.790e-60
Identity = 115/230 (50.00%), Postives = 157/230 (68.26%), Query Frame = 3 
Query:   69 EMRHEARMLAKVCNHACVVQFVGVLLRPVPSVVTKFMEEGSVEALLVSSDKPATKK-----MVVRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDAFHVRISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLFEMSSRSPPWEGHENLDVAYRVCSGERMTVP--PSVDALISPLMWSCWDQNPRQRPDFASILTALTEYAANPTVHGG 737
            E+ HEA ++++VC+H  +VQF+GVL RP P+VVTKFM  GS+E +L+ +   +  K      +VR+A++AA GV+HLH E V+HRD+A+RN L+D    VR++DFGFSR++    S+GYTRS  GPIKW +PEAMRKR YS  SD FSFGV+L+E+ + +PPW+G ENLDV +RVC GER+ V   P +   +  LM  CW Q    RPD  ++  AL +     TV GG
Sbjct:  809 ELSHEAHLMSRVCSHDHIVQFIGVLSRPRPAVVTKFMALGSLEDILLQTSPRSMWKELGLPQLVRLAVQAAAGVLHLHHEDVIHRDIAARNCLVDQGLCVRVADFGFSRLRDRNASKGYTRSTTGPIKWMAPEAMRKRAYSVKSDVFSFGVLLWEIFTGTPPWKGEENLDVLFRVCGGERLDVAAQPDLPPDLVKLMQQCWAQEAADRPDMQAVHAALLQL--QDTVDGG 1036
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BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Match: A0A2R5G438_9STRA (Protein kinase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G438_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.820e-53
Identity = 124/281 (44.13%), Postives = 168/281 (59.79%), Query Frame = 3 
Query:    9 EGEGDGRASR-TRSESMDGEE-EMRHEARMLAKVCNHACVVQFVGVLLRPVPSVVTKFMEEGSVEALLVSSD-----KPATKKMVVRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDAFHVRISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLFEMSSRSPPWEGHENLDVAYRVCSGERMTVPPSVDA--LISPLMWSCWDQNPRQRP---DFASILTALTEYAANPTVHGGEALVKPSTPAHDSKPSATVAGMAARA 815
            EGE +G  S   R  S   EE +++HEA M+++V NH  +V FVGVLL P P VVTK M  GSVE +LV        K   +  +++M ++AA GV+HLH EGV+HRD+ASRNLL+D+   V+++DFGF+R+K    S+GYT   +GPIKW +PEAMR R +SE +D FSFGV LFE+     PWEG E++DV YR+C GER  VP  V+    +  L+  C    P +RP   +   IL ++ + +  P         KP T +    P  T  G  ARA
Sbjct:  724 EGENNGNPSGLARGASCSSEEWDLKHEAAMMSRVSNHENIVPFVGVLLTPRPCVVTKLMRGGSVEDMLVVPGPLYKRKTIPEARILQMLVDAAAGVLHLHSEGVIHRDIASRNLLVDENLRVKVADFGFARIKEINRSKGYTSQHVGPIKWMAPEAMRYRRFSEQTDVFSFGVTLFEVLVGKRPWEGIESMDVVYRICDGERQLVPDEVECNQALRDLVKRCQRHGPEERPVMKEVHRILASVLQTSQTPPP-------KPPTSSASHIPDETPQGRDARA 997
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BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Match: A0A7S0PGQ5_CAFRO (Non-specific protein-tyrosine kinase (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PGQ5_CAFRO)

HSP 1 Score: 193 bits (490), Expect = 2.160e-52
Identity = 106/249 (42.57%), Postives = 151/249 (60.64%), Query Frame = 3 
Query:   69 EMRHEARMLAKVCNHACVVQFVGVLLRPVPSVVTKFMEEGSVEALLVSSDKPATKKM-----VVRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDAFHVRISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRK--RCYSEASDAFSFGVVLFEMSSRSPPWEGHENLDVAYRVCSGERMTVPPSVDALISPLMWSCWDQNPRQRPDFASILTALTEYAANPTVH--GGEALVKPSTPAHDSKPSA 788
            E+R EA M+A+V +H  +V+FVGV+ RP  +VVT+FM  GS+E LLVS      + +     V  MA  AA G++HLH E V+HRD+A+RNLL D +  VR+ DFGF+R+K+   SRGYT +  GPI+W +PEA+    + +SE SD +SFGV L E+ +  PPW+G E L VA +VCSG R  +P ++   I  L+  CW  +P +RP    +   L+   A    H   G   ++    A D+ P+A
Sbjct:   57 ELRQEADMMARVAHHEHIVRFVGVIERPFQAVVTEFMARGSLERLLVSPGPGNLRHLFTLRDVTAMACGAAAGILHLHEERVIHRDIAARNLLCDHSDRVRVCDFGFARLKQSSQSRGYTSATTGPIRWLAPEALMTSGKTFSEKSDVWSFGVTLTELFTGQPPWKGVETLQVAIQVCSGARQALPLALPTSIRDLVQRCWAADPSERPTMRDVHRLLSRSLALLEAHPAAGSIPLRTLDDARDAMPAA 305
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BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Match: A0A7S2WL09_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL09_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.510e-52
Identity = 111/271 (40.96%), Postives = 159/271 (58.67%), Query Frame = 3 
Query:   66 EEMRHEARMLAKVCNHACVVQFVGVLLRPVPSVVTKFMEEGSVEALLVS-----------SDKPATKKMVVRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDAFHVRISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLFEMSSRSPPWEGHENLDVAYRVC-SGERMTVP----PSVDALISPLMWSCWDQNPRQRPDFASILTALTE-------------YAANPTVHGGEALVKPSTPA---HDSKP 782
            EE+R EA +LA+VC+H  VV+FVG++   + +VV +FM  GS+E LL+             D+    + + RMA+EAAKG+ HLH E V+HRD+A+RN+L+D+  HVR++DFGF+R K    S+ YT+S++ P+KW+SPEA++ + YSEASD FSFGV L+E+  +S PW  H N++V   VC +G RM +P    P  D L   LM  CW   P+ RP    I   ++                 +PTV   + L  P  P    H+S P
Sbjct:   63 EELRREASLLARVCHHQFVVEFVGIVPEKL-AVVMRFMHNGSLEDLLIRHGGRRADEILPGDRNLRAREITRMALEAAKGISHLHSEQVIHRDIAARNILVDEHLHVRVADFGFARTKETGRSKCYTQSEILPVKWSSPEAIKWKHYSEASDVFSFGVFLYELVVQSAPWPNHSNMEVVCLVCGTGARMGLPEYLPPPFDQLAE-LMSKCWQHEPQDRPTMELIELVISNALESSGMPARQPPLPTSPTVRPQDELYSPMRPTAQGHNSDP 331
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BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Match: A0A7S4D4E3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4E3_HETAK)

HSP 1 Score: 179 bits (453), Expect = 7.840e-50
Identity = 83/129 (64.34%), Postives = 100/129 (77.52%), Query Frame = 3 
Query:  315 ASRNLLLDDAFHVRISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLFEMSSRSPPWEGHENLDVAYRVCSGERMTVPPSVDALISPLMWSCWDQNPRQRPDFASILTAL 701
            A+RNLL+DD   VR+SDFGF+RVK  C SRGYTR++MGPIKWT+PEAMR++ YSE+SD FSFGVVLFEM +R PPW G ENLDVA RVCSGERM +P  +D  I+ L+  CW + P QRP   SI+  L
Sbjct:    1 AARNLLVDDHLRVRVSDFGFARVKDACASRGYTRTEMGPIKWTAPEAMRRKVYSESSDVFSFGVVLFEMFAREPPWRGLENLDVAVRVCSGERMPLPHDMDPNITNLIKKCWAEEPCQRPGLTSIIEYL 129
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BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Match: L8GMP4_ACACA (Thioredoxin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GMP4_ACACA)

HSP 1 Score: 184 bits (466), Expect = 4.990e-46
Identity = 91/218 (41.74%), Postives = 137/218 (62.84%), Query Frame = 3 
Query:   69 EMRHEARMLAKVCNHACVVQFVGVLLRPVP----SVVTKFMEEGSVEALLVSSDKPATKKMVVRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDAFHVRISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLFEMSSRSPPWEGHENLDVAYRVCSGERMTVPPSVDALISPLMWSCWDQNPRQRPDFASILTALTEY 710
            E+R EA+M+ ++ NH  +V+FVG + R       ++VT+F   GS+  LLV + K      +VRMA +AA G++HLH+E +VHRD+A+RN+L+   + V +SDFG +R +        T+ + GP+ W +PEA++ R YSEA+DAFSFGV+L+EM +R  PW G E + +   V S  R+ +P   D + + LM  CW QNP QRP F  +   L++Y
Sbjct:  341 ELRTEAQMMERLSNHPGIVKFVGAITRGDDGANFALVTEFCPRGSLYDLLVKNKKKLPLITLVRMARDAASGILHLHKEHIVHRDIAARNILVGQNYEVYVSDFGLARAQEADGQVATTKQNFGPLAWMAPEALKSREYSEATDAFSFGVLLWEMMARKRPWAGVEPVQIITSVTSNTRLRIPKDCDPIFAQLMKMCWRQNPSQRPSFDKVADVLSKY 558
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BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Match: L8HCK5_ACACA (MAP kinase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCK5_ACACA)

HSP 1 Score: 180 bits (456), Expect = 6.370e-44
Identity = 93/231 (40.26%), Postives = 136/231 (58.87%), Query Frame = 3 
Query:   69 EMRHEARMLAKVCNHACVVQFVGVLLR----------PVP-------SVVTKFMEEGSVEALLVSSDKPATKKMVVRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDAFHVRISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLFEMSSRSPPWEGHENLDVAYRVCSGERMTVPPSVDALISPLMWSCWDQNPRQRPDFASILTALTEY 710
            E+R EA+M+ ++ NH  +V+FVG + R          P P       ++VT+F   GS+  LLV   K      +VRMA +AA G++HLH+E +VHRD+A+RN+L+   + V ++DFG +R +        T+ + GPI W +PEA+R R YSEA+DAFSFGV+L+EM  R  PW G E + V   V +  R+ +P   D +   LM  CW QNP  RP F  ++  L++Y
Sbjct:  574 ELRMEAQMMERLSNHPNIVKFVGAITRGEYSDLAHVEPAPRNEGANFALVTEFCSRGSLLDLLVKKKKKLPLITLVRMARDAASGILHLHKEHIVHRDIAARNILVGQNYEVYVADFGLARAQEAEGQVATTKQNFGPISWMAPEALRSREYSEATDAFSFGVLLWEMVERKRPWAGMEAVQVVTAVTTNTRLKIPKDCDPVFQRLMKMCWRQNPAHRPSFEKMVNTLSDY 804
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BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Match: L8HA88_ACACA (Protein kinase domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HA88_ACACA)

HSP 1 Score: 179 bits (453), Expect = 8.580e-44
Identity = 89/218 (40.83%), Postives = 134/218 (61.47%), Query Frame = 3 
Query:   69 EMRHEARMLAKVCNHACVVQFVGVLLRPVP----SVVTKFMEEGSVEALLVSSDKPATKKMVVRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDAFHVRISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLFEMSSRSPPWEGHENLDVAYRVCSGERMTVPPSVDALISPLMWSCWDQNPRQRPDFASILTALTEY 710
            E+R EA+M+ ++ NH  +V+FVG + +       ++VT+F   GS+  LLV   K      +VRMA +AA GV+HLH+E +VHRDLA+RN+L+   + V ++DFG +RV+        T+ + GPI W +PE ++ R YSEA+DAFSFGV+L+EM  +  PW G E + +   V    R+ +P   D + + +M  CW QNP QRP F  ++  L+ Y
Sbjct:  403 ELRSEAQMMERLSNHPSIVKFVGAITKGEEGSNFALVTEFCPRGSLYDLLVKKKKKLPLITLVRMARDAASGVLHLHKEHIVHRDLAARNILVGQNYEVYVADFGLARVQAAEGQVATTKQNFGPIAWMAPEGLKAREYSEATDAFSFGVLLWEMMVKKRPWAGVEPVQIITSVVGNTRLRIPKDCDPIFAQIMKMCWRQNPAQRPSFEKLVDMLSSY 620
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BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Match: A0A5A8EFA3_CAFRO (Non-specific protein-tyrosine kinase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EFA3_CAFRO)

HSP 1 Score: 179 bits (453), Expect = 1.630e-43
Identity = 92/195 (47.18%), Postives = 129/195 (66.15%), Query Frame = 3 
Query:   69 EMRHEARMLAKVCNHACVVQFVGVLLRPVPSVVTKFMEEGSVEALLVSSDKPATKKM-----VVRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDAFHVRISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRK--RCYSEASDAFSFGVVLFEMSSRSPPWEGHENLDVAYRVCSGERMTVPPSVDALISP 632
            E+R EA M+A+V +H  +V+FVGV+ RP  +VVT+FM  GS+E LLVS      + +     V  MA  AA G++HLH E V+HRD+A+RNLL D +  VR+ DFGF+R+K+   SRGYT +  GPI+W +PEA+    + +SE SD +SFGV L E+ +  PPW+G E L VA +VCSG R  +P ++   + P
Sbjct: 1183 ELRQEADMMARVAHHEHIVRFVGVIERPFQAVVTEFMARGSLERLLVSPGPGNLRHLFTLRDVTAMACGAAAGILHLHEERVIHRDIAARNLLCDHSDRVRVCDFGFARLKQSSQSRGYTSATTGPIRWLAPEALMTSGKTFSEKSDVWSFGVTLTELFTGQPPWKGVETLQVAIQVCSGARQALPLALPTRVHP 1377
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10304.437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB42_ECTSI4.150e-11684.23Protein tyrosine kinase n=1 Tax=Ectocarpus silicul... [more]
A0A813CZ72_9DINO1.790e-6050.00Non-specific protein-tyrosine kinase n=1 Tax=Symbi... [more]
A0A2R5G438_9STRA1.820e-5344.13Protein kinase, putative n=1 Tax=Hondaea fermental... [more]
A0A7S0PGQ5_CAFRO2.160e-5242.57Non-specific protein-tyrosine kinase (Fragment) n=... [more]
A0A7S2WL09_9STRA3.510e-5240.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4D4E3_HETAK7.840e-5064.34Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
L8GMP4_ACACA4.990e-4641.74Thioredoxin, putative n=1 Tax=Acanthamoeba castell... [more]
L8HCK5_ACACA6.370e-4440.26MAP kinase, putative n=1 Tax=Acanthamoeba castella... [more]
L8HA88_ACACA8.580e-4440.83Protein kinase domain containing protein n=1 Tax=A... [more]
A0A5A8EFA3_CAFRO1.630e-4347.18Non-specific protein-tyrosine kinase n=4 Tax=Cafet... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10304contigP-canaliculata_contig10304:5789..10815 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score382.9
Seed ortholog evalue1.8e-103
Seed eggNOG ortholog2880.D8LB42
Preferred nameRIPK3
KEGG koko:K08332,ko:K08841,ko:K08847
KEGG Pathwayko04217,ko04621,ko04623,ko04668,map04217,map04621,map04623,map04668
GOsGO:0001775,GO:0001776,GO:0001817,GO:0001910,GO:0001914,GO:0001932,GO:0001934,GO:0002260,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002685,GO:0002691,GO:0002694,GO:0002697,GO:0002703,GO:0002706,GO:0002709,GO:0002819,GO:0002822,GO:0003674,GO:0003712,GO:0003713,GO:0003824,GO:0004672,GO:0004674,GO:0004704,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0007154,GO:0007165,GO:0007249,GO:0007275,GO:0008150,GO:0008152,GO:0008219,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010921,GO:0010922,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0012501,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030098,GO:0030154,GO:0030217,GO:0030234,GO:0030334,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031341,GO:0031399,GO:0031401,GO:0032147,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032649,GO:0032879,GO:0032944,GO:0033077,GO:0033674,GO:0035303,GO:0035306,GO:0035556,GO:0036211,GO:0038061,GO:0040012,GO:0042110,GO:0042127,GO:0042129,GO:0042325,GO:0042327,GO:0042592,GO:0042802,GO:0042981,GO:0043029,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043170,GO:0043412,GO:0043549,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045321,GO:0045859,GO:0045860,GO:0045935,GO:0045937,GO:0046006,GO:0046649,GO:0046777,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048535,GO:0048536,GO:0048538,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048872,GO:0050670,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0050863,GO:0050865,GO:0050896,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051246,GO:0051247,GO:0051249,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051270,GO:0051291,GO:0051336,GO:0051338,GO:0051340,GO:0051341,GO:0051345,GO:0051347,GO:0051351,GO:0051353,GO:0051716,GO:0060255,GO:0060544,GO:0060545,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070228,GO:0070232,GO:0070235,GO:0070265,GO:0070266,GO:0070663,GO:0071704,GO:0071840,GO:0080090,GO:0097190,GO:0097300,GO:0097435,GO:0098772,GO:0140096,GO:0140110,GO:1901564,GO:1902531,GO:1902533,GO:1902680,GO:1903506,GO:1903508,GO:1990000,GO:2000106,GO:2000112,GO:2000145,GO:2000377,GO:2000379,GO:2000401,GO:2000404,GO:2000407,GO:2000449,GO:2000452,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0515@1,COG0666@1,KOG0192@2759,KOG4177@2759
EC2.7.11.1,2.7.12.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionprotein tyrosine kinase
Ec32 orthologEc-27_005300.1
Exons5
Model size1906
Cds size1164
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815601.9340603-UTR-P-canaliculata_contig10304:5788..58411622815601.9340603-UTR-P-canaliculata_contig10304:5788..5841Pelvetia canaliculata dioeciousUTRP-canaliculata_contig10304 5789..5841 +
1693494160.3018463-UTR-P-canaliculata_contig10304:5788..58411693494160.3018463-UTR-P-canaliculata_contig10304:5788..5841Pelvetia canaliculata dioeciousUTRP-canaliculata_contig10304 5789..5841 +
1622815602.0163336-UTR-P-canaliculata_contig10304:10126..108151622815602.0163336-UTR-P-canaliculata_contig10304:10126..10815Pelvetia canaliculata dioeciousUTRP-canaliculata_contig10304 10127..10815 +
1693494160.3658712-UTR-P-canaliculata_contig10304:10126..108151693494160.3658712-UTR-P-canaliculata_contig10304:10126..10815Pelvetia canaliculata dioeciousUTRP-canaliculata_contig10304 10127..10815 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815601.9445953-CDS-P-canaliculata_contig10304:5841..59061622815601.9445953-CDS-P-canaliculata_contig10304:5841..5906Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10304 5842..5906 +
1693494160.315279-CDS-P-canaliculata_contig10304:5841..59061693494160.315279-CDS-P-canaliculata_contig10304:5841..5906Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10304 5842..5906 +
1622815601.954159-CDS-P-canaliculata_contig10304:6636..68071622815601.954159-CDS-P-canaliculata_contig10304:6636..6807Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10304 6637..6807 +
1693494160.323844-CDS-P-canaliculata_contig10304:6636..68071693494160.323844-CDS-P-canaliculata_contig10304:6636..6807Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10304 6637..6807 +
1622815601.9711096-CDS-P-canaliculata_contig10304:7458..76351622815601.9711096-CDS-P-canaliculata_contig10304:7458..7635Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10304 7459..7635 +
1693494160.3330317-CDS-P-canaliculata_contig10304:7458..76351693494160.3330317-CDS-P-canaliculata_contig10304:7458..7635Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10304 7459..7635 +
1622815601.9891415-CDS-P-canaliculata_contig10304:8584..87171622815601.9891415-CDS-P-canaliculata_contig10304:8584..8717Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10304 8585..8717 +
1693494160.3446295-CDS-P-canaliculata_contig10304:8584..87171693494160.3446295-CDS-P-canaliculata_contig10304:8584..8717Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10304 8585..8717 +
1622815602.002093-CDS-P-canaliculata_contig10304:9508..101261622815602.002093-CDS-P-canaliculata_contig10304:9508..10126Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10304 9509..10126 +
1693494160.356264-CDS-P-canaliculata_contig10304:9508..101261693494160.356264-CDS-P-canaliculata_contig10304:9508..10126Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10304 9509..10126 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10304.437.1prot_P-canaliculata_contig10304.437.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig10304 5842..10126 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10304.437.1

>prot_P-canaliculata_contig10304.437.1 ID=prot_P-canaliculata_contig10304.437.1|Name=mRNA_P-canaliculata_contig10304.437.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=388bp
MDGEEEMRHEARMLAKVCNHACVVQFVGVLLRPVPSVVTKFMEEGSVEAL
LVSSDKPATKKMVVRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDAFHV
RISDFGFSRVKRECISRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFG
VVLFEMSSRSPPWEGHENLDVAYRVCSGERMTVPPSVDALISPLMWSCWD
QNPRQRPDFASILTALTEYAANPTVHGGEALVKPSTPAHDSKPSATVAGM
AARAKAAAAAAAVETEPAAESQREGSATRPAAEGGDGTPRSRPRRRKGVS
WRERRNTNDRSGQGNDRGDRSERPEASNAQNGDYGRNKRGGRLGGRGGAS
HHSSASQGGKGGLSNGSAPPSRSWKAGRGRGRGSRDV*
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mRNA from alignment at P-canaliculata_contig10304:5789..10815+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10304.437.1 ID=mRNA_P-canaliculata_contig10304.437.1|Name=mRNA_P-canaliculata_contig10304.437.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5027bp|location=Sequence derived from alignment at P-canaliculata_contig10304:5789..10815+ (Pelvetia canaliculata dioecious)
GGCATGGCGAGGGGGAAGGGGACGGGCGAGCCTCGCGGACGCGATCGGAG
TCGATGGACGGAGAGGAAGAGATGCGGCACGAGGCGAGAATGCTCGCTAA
GGTGTGCAACCACGCCTGGTGAGCTAGAAGACATTTCGTTATGTGTACTT
GAATGTATCGGAGAAATGAAAGTTTTCGATTTTGTGCGCGTGTCTCGGTG
GCTGGCTGTGGCTGGCTGTTCGAGCGAGTGGGAAAAATATTCTCCTACGT
TAGACCAGAAGCTTGTGCCACATGTTGTAATCACGTCTTCTTTTGGTTCC
TTTCTCGAAGTTGATACTCACAGCAGTAAATTATATACTTGTATGCGGTA
TAAGGACGGTACAGAAGGACGAGAGAAGTGCCCCCTATCTCGGCACATCT
CGGCACAACGAAGATCGCGCCGCAGGAGACGAAACTCGAAACGTAGGGGT
ACTGTAGCATTTGTGTTGACGTCATTCCCACCTCTAGTAATATTAATAGT
GTCCCTGGACTGGAAACTGTGAAGCTGGAAGGGCACGTCGAAAAATTGAA
GTATATGGGCGGAGATGGTGAGATCCAAATTCCAAGAGGATCATGCTAAC
ACATATCTCCCGCGGGAGAAAATTATCACTCTTAGCGTAGACGACGGAGC
AAAGGGTGACGGAGCAAAGCGGAGGTGGTGGCAAAATTTTAGCTGAATGC
AGTGATGCGCTGACTGATGACCTGGCTGATGGCCTCGCTCGCTGACTGAC
TATTAGTGTTATTAATATCAATACTGACTACTAATGCTAATATTTACAAT
ATTTCCCAATGGGATACCTCTTGCCTCTTGCCTCTTTTGTCGGCTCAGCG
TGGTGCAGTTCGTGGGAGTGCTCCTGCGACCGGTACCCTCGGTCGTTACC
AAATTCATGGAAGAGGGGTCCGTGGAGGCCCTGCTGGTGTCCTCCGACAA
GCCTGCGACGAAGAAGATGGTGGTTCGGATGGCAATCGAGGCGGCGAAGG
GAGTCATCCACCTGCACAGGCGAGGCGAGGCGAAGCGATCGTTCTTGTTC
TTCAAAAGTTCATTCAAAAGTTCATTCAAAAATCGAGAAAAGTCTTGAAA
ACTATACAATTCCTCTTCACTGCATGTTTTCCCTCTCTTTATCTATATAT
TTATATGTGTGTCTGTTATCTTCTGGTTGTGTTTTTTTCCTTCGGTTTCT
TGCGTGTGGATACAACCGACCTTTTTTCTGTCAAAAGCCACGACAGAGCG
AGGGCAATACGCACGCATGCCTTGGGAATGCGCCATGGGACAAGAATTGG
GCGATATCCGCTGTTGGAGGGAGGCGGGGGCCGGTACCAGTGTTTTGCCG
GTACAACGCAGCAGCCGGCGGAAGAAATCGTCTAGAAAAAAAATGGCCCT
GTGCTCCTCATGGTTGTGAATTATAACCTGCGCCACCTCATGTCCAACAC
AAAGCCGGTACCCGTACATGGCATACGTAACGAAACGAAGCGAAATGAAA
TGAAAAATGCACAGCGGAACGAAACAAAACACGACGAAACGGAACTAAAC
ACCACAACGGATGAAACGAAACGAAATATACCAGACGGCGCGAGAAGAAA
CATACACGACTAAACGGAACGAGCCTACCCGACGAAACGAAACGAAACGA
AACGAAATTAAACAAAACAGGGAGGGCGTCGTCCACCGTGACCTCGCCTC
GCGAAACCTCCTGCTGGACGACGCTTTCCACGTGCGTATCTCCGACTTCG
GATTCTCGAGGGTGAAGCGCGAATGTATAAGCCGTGGGTACACGAGGAGC
GACATGGGCCCCATTAAGTGGACGAGCCCCGAGGCCATGCGAAAGCGGTG
AGCCCCTATAGGGATCGGCTGAGGATACTGTACTGGTGAAAGCATGTTCT
CGATGGCACGGGGGAAAACGGTTACCCTTGTGTCTTGGCCACGACGGTTG
CGTTTTGTAACGCCAATCGATTCTGATTGATCACCTATGTGGTGCTTACT
CACGAGATTTCTCTAGCTTTCCGCTACGGCGTCCATATATTTATACCGTC
AACCGCCATAAGGTCAGCTCCGAGTTTATCAGGTCACGTAACTACGTACC
GACGATGCCGTTCGTTCACTGCCGAGAGGCCGCCGGCTCAGGGCCATTAG
TCATCAAGGTAGTTGGAGTAACGGGTGCTGCCTTTTCAGGTTTCGCCACG
GACCAATTGGTATGTGCCTCTCTTTTTTCACGCCCACTAATGATATGTAT
TATTAATTATAGTGTTAATAGACATGCGTGATACAGAATGTATCGTAGGC
GGTACACTTCCCTCGAAGCTATAGCGACCGAGATCATTTTTAAAAGCCAG
TTTTTTTTTCCCAATTTCCCGCCATCGATGGTGTTAACAAAAATCGCAAC
AAAAATAAATTTAAAAAACGGAAAAGTAACAAAAACGTCCACGGAAAAGG
GGAAAGTATGCCTTCAGAGAATAAATCCGTTAGTATGCGCCAATGCGTTG
TCGGAAACGGCTCTATTTCGCCATTTTTTGTACCTGATGCAGTTCTTGCC
ACATTCACACTCTTACTACAGTATTAATTCGAGCATTGAAGCATTGATTG
GCTTGTTGAAGAGTGCTGAACTTGTATGGCGACAAAAATTCGTAAGGCAA
GAAGAACCGAGGAGAGCTGGGAAAATTCCTTGTAACCACAGGCAAGGATG
GCAAAGTTGCAGGAGGTAAGATTGGTAGCCTAGCACGTTGAGGCGTAGCC
CATCTGCCACAAGCGAACATTCCTTTTTTGTTTCCTTTATCGCCAGTTGC
TACAGCGAGGCTTCTGACGCATTTTCGTTCGGGGTCGTGCTGTTCGAGAT
GTCCTCAAGGAGTCCTCCCTGGGAAGGGCACGAGAATCTAGACGTAGCGT
ACCGCGTGTGCTCAGGCGAAAGGATGACGGTGAGCGGTTACACTATTTAC
TATTGTCTACCAGGTAATTATTATCTTGATATTACTAGTACCTGGTACTT
TACTAACTTTACGGTACGATTTGTGCTTTGGTGTCTCCTGTGTTGCACGT
ACTGCATCGTGGTTGATACCACATTCAGTATGAAGATGAGCAGGCTGGCG
CGGGACGGGGCTGCCGAACCCGTCTCGCGAGACCAAATCTCAGACGCGAA
CGCGGACAGGGAAATATTCATTTTCCCTGTTCAACTGACCGCGAGCAGGA
TTGGCGACCCTACCCGGTTGATCCTTACCCTTGCTATATGTGTGACCATA
CATACATACATACCACATATGATACCGCACGGAAGCTTTTCCCGTGAAGG
TGAAGGCAATGGTGATGGCCCGGAAAACAAATGTTCATTGTAGTCCATTG
TTTTGGTCTCGGAGCTGCTTGAGGGAGGTCGTACCGCTTGCCTCCGCTAT
TAATAATTTTGAGAGGCGATACAGATAGCGATAAGACTCCATACTCCTGC
TATACTACGAGTGGTATGTAACCTCGTGCCACGGCCTGCACCGCCATCTT
GCGTATCCATAAGTGAACACAGTCGATCGCCATTAACAGTGCGACAAGTG
TCTTCTTGTTTCATAATTTTATGCCTTCGGCTTAGTTTTAGTCTTAGTCT
TGGATCGGGTAAAATCACGACCACAAACCTCTCTGCTTCCCCGCCCTTAT
TTTCTATAGAACTCCGTATAGAACTCAAACTCCGTATACTTTTGCTGTTT
TGTCTGTGCCGTATGCACAGGTTCCGCCGTCTGTCGACGCGCTGATTTCG
CCTCTCATGTGGAGTTGCTGGGACCAAAATCCTCGACAACGCCCTGACTT
CGCGTCCATCCTCACCGCCCTCACGGAATACGCGGCCAACCCGACGGTTC
ATGGCGGGGAGGCCCTCGTAAAACCCTCAACCCCGGCACACGACAGCAAA
CCTTCCGCTACCGTGGCAGGCATGGCAGCGAGGGCGAAGGCAGCAGCCGC
AGCCGCAGCCGTGGAGACAGAACCTGCAGCGGAATCGCAGCGAGAGGGCA
GTGCTACCCGTCCAGCAGCGGAGGGGGGAGATGGCACGCCGCGCTCAAGA
CCACGAAGAAGGAAAGGGGTATCCTGGCGCGAGCGACGAAACACGAACGA
TCGCTCGGGTCAAGGGAACGATCGCGGGGATCGTAGCGAACGTCCAGAGG
CTTCCAACGCACAAAATGGCGACTACGGCAGAAATAAACGGGGTGGGCGT
CTCGGGGGTCGGGGAGGCGCTAGCCACCACAGCTCTGCGTCGCAGGGTGG
TAAAGGGGGGCTGTCGAATGGTTCAGCGCCTCCCTCGCGATCATGGAAGG
CGGGACGCGGCCGGGGACGGGGTAGTCGAGACGTCTGATCGGGGTGAACA
AGGCCCGGGCGCAGCGTTGAAGTGTAAGGTGGATGGCGAGGGGAGAGGGG
AGAGGAAAGATCGGCCTTTAAATCTAATCTAGGCTAGGCTTGGCTAGGGT
TGATTCTTGTAGCGCCTGTCGACCATCCTGTTTGTTGTTGCATGCATGCG
CCATCGCCCATCTTTAGTCTACTGTTCTCTTATTCTCTTGTTGATCTGTG
ATGCGTGACGTAGTTTGAGGATTACCTCGTTCTTTTCTTCTCCAGAACGA
GAGAACTCACTTGAAATTGCATAAAAGGTGTACAGAGTAAAGTACCTTTG
CTGGAAGAAATACAGTTCGTTTTTGTTGACATTTAGATTTAGATTTCGTA
AGTAATTCCAATGGCGTTCAAGTTTTGACCGCTATCAACTGTTAACAATA
TGTAGTGGTCTAGTAGGTAAACTGCACACCTGCTAGTGCGGAAGTCGTGA
GTTAGATTCTTGCCAAAGCATCAGCCGGCTCATTCTCCACACTTCGGCTG
AATCTGGACATTCTTCGCGGGATCCCTCCCGCTTTCCGGGACGGCGTCCA
CATATGCCTATAATAAATAGTAAGCAGCAAATAAAAAATAGTAAAAAAAA
ACGCGGAACCGAATTCGGGCGTTTCTCTTTTGTTCTCTTTTGTGCGAGGG
ATAACCACGGGGTACATTACAGTACAG
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Coding sequence (CDS) from alignment at P-canaliculata_contig10304:5789..10815+

>mRNA_P-canaliculata_contig10304.437.1 ID=mRNA_P-canaliculata_contig10304.437.1|Name=mRNA_P-canaliculata_contig10304.437.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2328bp|location=Sequence derived from alignment at P-canaliculata_contig10304:5789..10815+ (Pelvetia canaliculata dioecious)
ATGGACGGAGAGGAAGAGATGCGGCACGAGGCGAGAATGCTCGCTAAGGT
GTGCAACCACGCCTGATGGACGGAGAGGAAGAGATGCGGCACGAGGCGAG
AATGCTCGCTAAGGTGTGCAACCACGCCTGCGTGGTGCAGTTCGTGGGAG
TGCTCCTGCGACCGGTACCCTCGGTCGTTACCAAATTCATGGAAGAGGGG
TCCGTGGAGGCCCTGCTGGTGTCCTCCGACAAGCCTGCGACGAAGAAGAT
GGTGGTTCGGATGGCAATCGAGGCGGCGAAGGGAGTCATCCACCTGCACA
GCGTGGTGCAGTTCGTGGGAGTGCTCCTGCGACCGGTACCCTCGGTCGTT
ACCAAATTCATGGAAGAGGGGTCCGTGGAGGCCCTGCTGGTGTCCTCCGA
CAAGCCTGCGACGAAGAAGATGGTGGTTCGGATGGCAATCGAGGCGGCGA
AGGGAGTCATCCACCTGCACAGGGAGGGCGTCGTCCACCGTGACCTCGCC
TCGCGAAACCTCCTGCTGGACGACGCTTTCCACGTGCGTATCTCCGACTT
CGGATTCTCGAGGGTGAAGCGCGAATGTATAAGCCGTGGGTACACGAGGA
GCGACATGGGCCCCATTAAGTGGACGAGCCCCGAGGCCATGCGAAAGCGG
GAGGGCGTCGTCCACCGTGACCTCGCCTCGCGAAACCTCCTGCTGGACGA
CGCTTTCCACGTGCGTATCTCCGACTTCGGATTCTCGAGGGTGAAGCGCG
AATGTATAAGCCGTGGGTACACGAGGAGCGACATGGGCCCCATTAAGTGG
ACGAGCCCCGAGGCCATGCGAAAGCGTTGCTACAGCGAGGCTTCTGACGC
ATTTTCGTTCGGGGTCGTGCTGTTCGAGATGTCCTCAAGGAGTCCTCCCT
GGGAAGGGCACGAGAATCTAGACGTAGCGTACCGCGTGTGCTCAGGCGAA
AGGATGACGTTGCTACAGCGAGGCTTCTGACGCATTTTCGTTCGGGGTCG
TGCTGTTCGAGATGTCCTCAAGGAGTCCTCCCTGGGAAGGGCACGAGAAT
CTAGACGTAGCGTACCGCGTGTGCTCAGGCGAAAGGATGACGGTTCCGCC
GTCTGTCGACGCGCTGATTTCGCCTCTCATGTGGAGTTGCTGGGACCAAA
ATCCTCGACAACGCCCTGACTTCGCGTCCATCCTCACCGCCCTCACGGAA
TACGCGGCCAACCCGACGGTTCATGGCGGGGAGGCCCTCGTAAAACCCTC
AACCCCGGCACACGACAGCAAACCTTCCGCTACCGTGGCAGGCATGGCAG
CGAGGGCGAAGGCAGCAGCCGCAGCCGCAGCCGTGGAGACAGAACCTGCA
GCGGAATCGCAGCGAGAGGGCAGTGCTACCCGTCCAGCAGCGGAGGGGGG
AGATGGCACGCCGCGCTCAAGACCACGAAGAAGGAAAGGGGTATCCTGGC
GCGAGCGACGAAACACGAACGATCGCTCGGGTCAAGGGAACGATCGCGGG
GATCGTAGCGAACGTCCAGAGGCTTCCAACGCACAAAATGGCGACTACGG
CAGAAATAAACGGGGTGGGCGTCTCGGGGGTCGGGGAGGCGCTAGCCACC
ACAGCTCTGCGTCGCAGGGTGGTAAAGGGGGGCTGTCGAATGGTTCAGCG
CCTCCCTCGCGATCATGGAAGGCGGGACGCGGCCGGGGACGGGGTAGTCG
AGACGTCTGAGTTCCGCCGTCTGTCGACGCGCTGATTTCGCCTCTCATGT
GGAGTTGCTGGGACCAAAATCCTCGACAACGCCCTGACTTCGCGTCCATC
CTCACCGCCCTCACGGAATACGCGGCCAACCCGACGGTTCATGGCGGGGA
GGCCCTCGTAAAACCCTCAACCCCGGCACACGACAGCAAACCTTCCGCTA
CCGTGGCAGGCATGGCAGCGAGGGCGAAGGCAGCAGCCGCAGCCGCAGCC
GTGGAGACAGAACCTGCAGCGGAATCGCAGCGAGAGGGCAGTGCTACCCG
TCCAGCAGCGGAGGGGGGAGATGGCACGCCGCGCTCAAGACCACGAAGAA
GGAAAGGGGTATCCTGGCGCGAGCGACGAAACACGAACGATCGCTCGGGT
CAAGGGAACGATCGCGGGGATCGTAGCGAACGTCCAGAGGCTTCCAACGC
ACAAAATGGCGACTACGGCAGAAATAAACGGGGTGGGCGTCTCGGGGGTC
GGGGAGGCGCTAGCCACCACAGCTCTGCGTCGCAGGGTGGTAAAGGGGGG
CTGTCGAATGGTTCAGCGCCTCCCTCGCGATCATGGAAGGCGGGACGCGG
CCGGGGACGGGGTAGTCGAGACGTCTGA
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