mRNA_P-canaliculata_contig10291.428.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: D7G5M6_ECTSI (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M6_ECTSI) HSP 1 Score: 273 bits (698), Expect = 2.230e-85 Identity = 148/210 (70.48%), Postives = 162/210 (77.14%), Query Frame = 1
Query: 1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYPARDDVNYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYG----------GVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
+RIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSG LVN IK VNYPSACNAAETIL+H+ + +E + TCSQ ++RAL AGVTVLGGP A+ LGVV DK SPGFKTEYG VE A+ HI +GS HTET+VTED+ VAK FLE VDSACVFHNASTR+SDGYRFGLGAEV V
Sbjct: 380 HRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIK----------VNYPSACNAAETILIHK-ALLEEGAGTCSQ----VVRALHSAGVTVLGGPRAVDLGVVGGDKISPGFKTEYGDLTVSLEIVDSVEAALDHIQRFGSSHTETIVTEDQDVAKMFLETVDSACVFHNASTRFSDGYRFGLGAEVGV 574
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A6H5JBC7_9PHAE (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC7_9PHAE) HSP 1 Score: 264 bits (674), Expect = 5.170e-80 Identity = 150/238 (63.03%), Postives = 165/238 (69.33%), Query Frame = 1
Query: 1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYP---------------ARDD-----------VNYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYG------------GVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
+RIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSG LVN IKA P A D VNYPSACNAAETIL+H+ + +E + TC+Q ++RAL GVTVLGGP A+ LGVV DK SPGFKTEYG VE A+ HI +GS HTET+VTED+ VAK FLE VDSACVFHNASTR+SDGYRFGLGAEV V
Sbjct: 559 HRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAKVNYPSACNAAETILIHK-ALLEEGAGTCAQ----VVRALHSTGVTVLGGPRAVDLGVVGGDKISPGFKTEYGECDLTVSLEIVDSVEAALDHIQMFGSSHTETIVTEDQDVAKMFLETVDSACVFHNASTRFSDGYRFGLGAEVGV 791
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A7S2UVN0_9STRA (Glutamate-5-semialdehyde dehydrogenase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVN0_9STRA) HSP 1 Score: 204 bits (520), Expect = 3.260e-62 Identity = 120/236 (50.85%), Postives = 140/236 (59.32%), Query Frame = 1
Query: 1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYPAR--------------------------DDVNYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYG----GVE------DAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
+R+IVDAV + G+V R+ IGLV SR+ V ELLKLD +IDLVIPRGSG LV SIK+ P NYP+ACNAAETIL H D +A + +LR LR AGV VLGGP A+ G+VD FKTEYG VE A+ HIH +GSGHTE +VTED+ A FL AVDSACVFHNASTR+SDGYRFGLGAEV +
Sbjct: 34 HRVIVDAVHSATGGKVSREVIGLVQSRSEVAELLKLDDVIDLVIPRGSGALVRSIKSGTRIPVLGHAEGICHVYVDKQADLKKAVALCVDSKTNYPAACNAAETILFHEDTVA-------TGVANEVLRGLRQAGVQVLGGPLAISQGLVDARAPVETFKTEYGCNSVSVEVVKDQASAVAHIHRWGSGHTELIVTEDQQAADSFLRAVDSACVFHNASTRFSDGYRFGLGAEVGI 262
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A835ZBW4_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW4_9STRA) HSP 1 Score: 201 bits (510), Expect = 8.360e-57 Identity = 121/234 (51.71%), Postives = 144/234 (61.54%), Query Frame = 1
Query: 7 IIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYP---------------ARDD-----------VNYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYGG-------VEDA---IRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
II DAV E + GRV R+ IGLV R AV ELLKLD LIDLVIPRGSG+LVN IK+ P A D+ +NYP+ACNA ET+LVH+DC+A + + AL AG VLGGP A+ G+ + +P FKTEYG V+DA I HIH +GSGHTE +VTED A A+ FLE VDSACVFHNASTR+SDG+RFGLGAEV +
Sbjct: 497 IIADAVFESTGGRVCREVIGLVVGRQAVAELLKLDALIDLVIPRGSGELVNRIKSTTKIPVLGHAEGVCHMFIDTAADEAKAIALAVDAKINYPAACNALETLLVHQDCVA-------TGLAKKVADALVSAGGKVLGGPRAIAAGLATEP--TPSFKTEYGENSLSLEVVDDAGAAIDHIHRFGSGHTEAIVTEDAATAQSFLERVDSACVFHNASTRFSDGFRFGLGAEVGI 721
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A7S2BH10_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BH10_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.460e-55 Identity = 110/236 (46.61%), Postives = 145/236 (61.44%), Query Frame = 1
Query: 1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYPA---------------RDDV-----------NYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYG----------GVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
++++VDAVA S G+VPR+ +GLVTSR V +LLKLD LIDLVIPRGS LV +IK P DDV NYP+ACNA ET+L+H+ A DS C+ ++R LR AGV++ GGP A+ G++D A+ EYG +E+AI HIH +GS HTE +VTED A A++F++ D+ACVFHNASTR++DG+RFGLGAEV +
Sbjct: 474 HKVVVDAVAAASDGKVPREIVGLVTSRTQVSDLLKLDRLIDLVIPRGSKALVTNIKKNTRIPVLGHADGICHTYIDQHADDVKAAAIAVDGKINYPAACNATETVLIHQ---AKVDSGGCAT----VMRELRKAGVSLKGGPNAIAQGLIDMSCAAKSLSVEYGDLTCLVEVVANMEEAIAHIHEHGSSHTECIVTEDTATAEEFIKTTDAACVFHNASTRFADGFRFGLGAEVGI 702
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: W7U194_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U194_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.080e-54 Identity = 111/236 (47.03%), Postives = 146/236 (61.86%), Query Frame = 1
Query: 1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYP----------------------ARDDVN----YPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYGGV----------EDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
+R+I DA+ S+GRVP + IGLVT+R+ V LL+LD +IDLVIPRGS LV SIK+ P AR V+ YP+ACNA ET+L+HR +AD + + +LRAL AGVTVLGGP A+K G+V A+ + EYG + E+AI HIH +GS HT+ ++TED A++FL +VDSACVFHNAS+R++DGYRFGLGAEV +
Sbjct: 487 HRVITDAMTTASEGRVPAEAIGLVTTRSEVSALLELDDVIDLVIPRGSSALVRSIKSSTRIPVLGHAEGVCHIYVDKGADLRKAARIVVDAKTDYPAACNAVETLLLHRSFVADG-----AIGASKLLRALMSAGVTVLGGPEAVKEGLVSPGHAAKDLRQEYGDLTITVEVVADMEEAIAHIHKFGSSHTDAIITEDPVCAEEFLRSVDSACVFHNASSRFADGYRFGLGAEVGI 717
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A0G4IMH3_PLABS (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IMH3_PLABS) HSP 1 Score: 184 bits (466), Expect = 1.030e-50 Identity = 112/233 (48.07%), Postives = 137/233 (58.80%), Query Frame = 1
Query: 10 IVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYPA---RDDV-----------------------NYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYGG----------VEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
IV+A+ S G VPRD + LV SR +GELL+LD IDLVIPRGS LVN IK P D V +YP+ACN+AET+LVH IA+ T +L+ L AGV +LGGP A++ + A+P KTEY V+DAI H+H YGSGHTET+VTED VA+QFL VDSAC+FHNASTR+SDG+RFGLGAEV +
Sbjct: 471 IVEAIERSSNGAVPRDVLQLVESREDIGELLQLDDCIDLVIPRGSSDLVNFIKGNTRIPVLGHADGVCHVYVDQYADLSKADHILIDSKTSYPAACNSAETVLVHEALIANGGVNT-------VLQTLGKAGVKLLGGPRAVRQLHLP---AAPSLKTEYSDLAMSLEIVSDVDDAIAHVHKYGSGHTETIVTEDGDVAEQFLRQVDSACIFHNASTRFSDGFRFGLGAEVGI 693
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: E1Z8M1_CHLVA (Glutamate-5-semialdehyde dehydrogenase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z8M1_CHLVA) HSP 1 Score: 177 bits (450), Expect = 1.090e-50 Identity = 114/237 (48.10%), Postives = 144/237 (60.76%), Query Frame = 1
Query: 1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYP---------------ARDD-----------VNYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGP-AALKLGVVDKDKASPGFKTEY----------GGVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
+++IVDAVAE + G V RD IGLVTSR + ELLKL +IDLVIPRGS +LV+ I+A P A D V+YP+ACNA E ILVH + ++ ++ +++AL+ AGVTV GG AA LG+ +P + EY GG+ +AI HIHT+GSGHTE +VTED+A A FL VDSACVFHNASTR+SDGYRFGLGAEV +
Sbjct: 136 HQLIVDAVAEVAPG-VGRDLIGLVTSRHEIDELLKLHDVIDLVIPRGSNQLVSYIQAHTKIPVLGHADGICHIYVDTAADPAKARRVCLDAKVDYPAACNAVEKILVHDSLVGEQLNS--------LVKALQDAGVTVHGGERAAAALGL----PPAPSVRHEYSSLDVTVELVGGLGEAIDHIHTHGSGHTECIVTEDQAAADDFLRRVDSACVFHNASTRFSDGYRFGLGAEVGI 359
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A1W0A8G2_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8G2_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.280e-50 Identity = 108/237 (45.57%), Postives = 139/237 (58.65%), Query Frame = 1
Query: 1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYPARDDV--------------------------NYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYG-----------GVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
+++I DA+ ++GRVPR IGLVT+R V ELLKLDH+IDL IPRGS LV IK P +YP+ACNA ET+LV + + S A I+ AL AGV +L GP A LGV+ + +A+P EYG GVE AI HI+ + SGHTE++VTED+ VA+QFL+ +DSACVFHNASTR++DG+RFGLGAEV +
Sbjct: 450 HKLIGDAIESETQGRVPRGVIGLVTTRDDVSELLKLDHVIDLCIPRGSNSLVTYIKKNTRIPVLGHAEGVCHMYIHSGANMEKAKSLVVDAKTDYPAACNALETLLVDKVHVD-------SGAIQSIIDALHDAGVKILVGPTAASLGVLPEAEAAPSLSHEYGAMALTLEVISGGVEKAIAHINAHSSGHTESIVTEDKNVAEQFLDGIDSACVFHNASTRFADGFRFGLGAEVGI 679
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A7S3HJX8_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJX8_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.030e-49 Identity = 104/234 (44.44%), Postives = 142/234 (60.68%), Query Frame = 1
Query: 7 IIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYP--------------ARDDV------------NYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEY----------GGVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
I+ DA+ +GS+G+V D + LVTSR + LLKLDH+IDLVIPRGS LV+ IK P A D+ +YPSACNA ET+L+H+ + S A +LRALR +GV + GGP A+K G+ + A TEY G ++ A+ HI+TY SGHT+++VTE++A A+ F++++DSACVFHNASTR++DGYRFGLGAEV +
Sbjct: 459 IVADAIKDGSEGKVSTDVVSLVTSRNDIDSLLKLDHVIDLVIPRGSNALVSHIKNNTHIPVMGHADGVCHVYIDAEADLTKAERIVIDAKTDYPSACNAMETLLIHQKHVD-------SGAADKLLRALRASGVALFGGPEAVKQGLAEVPAAD--LHTEYSDLKLTVEVVGSLDAAMEHINTYSSGHTDSIVTENKASAELFIKSIDSACVFHNASTRFADGYRFGLGAEVGI 683 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10291.428.1 >prot_P-canaliculata_contig10291.428.1 ID=prot_P-canaliculata_contig10291.428.1|Name=mRNA_P-canaliculata_contig10291.428.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=203bp NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKback to top mRNA from alignment at P-canaliculata_contig10291:502..3867+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10291.428.1 ID=mRNA_P-canaliculata_contig10291.428.1|Name=mRNA_P-canaliculata_contig10291.428.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=3366bp|location=Sequence derived from alignment at P-canaliculata_contig10291:502..3867+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10291:502..3867+ >mRNA_P-canaliculata_contig10291.428.1 ID=mRNA_P-canaliculata_contig10291.428.1|Name=mRNA_P-canaliculata_contig10291.428.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at P-canaliculata_contig10291:502..3867+ (Pelvetia canaliculata dioecious)back to top |