mRNA_P-canaliculata_contig10291.428.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig10291.428.1
Unique NamemRNA_P-canaliculata_contig10291.428.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: D7G5M6_ECTSI (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M6_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 2.230e-85
Identity = 148/210 (70.48%), Postives = 162/210 (77.14%), Query Frame = 1
Query:    1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYPARDDVNYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYG----------GVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
            +RIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSG LVN IK          VNYPSACNAAETIL+H+  + +E + TCSQ    ++RAL  AGVTVLGGP A+ LGVV  DK SPGFKTEYG           VE A+ HI  +GS HTET+VTED+ VAK FLE VDSACVFHNASTR+SDGYRFGLGAEV V
Sbjct:  380 HRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIK----------VNYPSACNAAETILIHK-ALLEEGAGTCSQ----VVRALHSAGVTVLGGPRAVDLGVVGGDKISPGFKTEYGDLTVSLEIVDSVEAALDHIQRFGSSHTETIVTEDQDVAKMFLETVDSACVFHNASTRFSDGYRFGLGAEVGV 574          
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A6H5JBC7_9PHAE (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC7_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 5.170e-80
Identity = 150/238 (63.03%), Postives = 165/238 (69.33%), Query Frame = 1
Query:    1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYP---------------ARDD-----------VNYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYG------------GVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
            +RIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSG LVN IKA    P               A D            VNYPSACNAAETIL+H+  + +E + TC+Q    ++RAL   GVTVLGGP A+ LGVV  DK SPGFKTEYG             VE A+ HI  +GS HTET+VTED+ VAK FLE VDSACVFHNASTR+SDGYRFGLGAEV V
Sbjct:  559 HRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGSLVNHIKASTKIPVMGHSEGICHVYIDKAADPTKAVEIAVDAKVNYPSACNAAETILIHK-ALLEEGAGTCAQ----VVRALHSTGVTVLGGPRAVDLGVVGGDKISPGFKTEYGECDLTVSLEIVDSVEAALDHIQMFGSSHTETIVTEDQDVAKMFLETVDSACVFHNASTRFSDGYRFGLGAEVGV 791          
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A7S2UVN0_9STRA (Glutamate-5-semialdehyde dehydrogenase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVN0_9STRA)

HSP 1 Score: 204 bits (520), Expect = 3.260e-62
Identity = 120/236 (50.85%), Postives = 140/236 (59.32%), Query Frame = 1
Query:    1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYPAR--------------------------DDVNYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYG----GVE------DAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
            +R+IVDAV   + G+V R+ IGLV SR+ V ELLKLD +IDLVIPRGSG LV SIK+    P                               NYP+ACNAAETIL H D +A       +     +LR LR AGV VLGGP A+  G+VD       FKTEYG     VE       A+ HIH +GSGHTE +VTED+  A  FL AVDSACVFHNASTR+SDGYRFGLGAEV +
Sbjct:   34 HRVIVDAVHSATGGKVSREVIGLVQSRSEVAELLKLDDVIDLVIPRGSGALVRSIKSGTRIPVLGHAEGICHVYVDKQADLKKAVALCVDSKTNYPAACNAAETILFHEDTVA-------TGVANEVLRGLRQAGVQVLGGPLAISQGLVDARAPVETFKTEYGCNSVSVEVVKDQASAVAHIHRWGSGHTELIVTEDQQAADSFLRAVDSACVFHNASTRFSDGYRFGLGAEVGI 262          
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A835ZBW4_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW4_9STRA)

HSP 1 Score: 201 bits (510), Expect = 8.360e-57
Identity = 121/234 (51.71%), Postives = 144/234 (61.54%), Query Frame = 1
Query:    7 IIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYP---------------ARDD-----------VNYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYGG-------VEDA---IRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
            II DAV E + GRV R+ IGLV  R AV ELLKLD LIDLVIPRGSG+LVN IK+    P               A D+           +NYP+ACNA ET+LVH+DC+A       +     +  AL  AG  VLGGP A+  G+  +   +P FKTEYG        V+DA   I HIH +GSGHTE +VTED A A+ FLE VDSACVFHNASTR+SDG+RFGLGAEV +
Sbjct:  497 IIADAVFESTGGRVCREVIGLVVGRQAVAELLKLDALIDLVIPRGSGELVNRIKSTTKIPVLGHAEGVCHMFIDTAADEAKAIALAVDAKINYPAACNALETLLVHQDCVA-------TGLAKKVADALVSAGGKVLGGPRAIAAGLATEP--TPSFKTEYGENSLSLEVVDDAGAAIDHIHRFGSGHTEAIVTEDAATAQSFLERVDSACVFHNASTRFSDGFRFGLGAEVGI 721          
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A7S2BH10_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BH10_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.460e-55
Identity = 110/236 (46.61%), Postives = 145/236 (61.44%), Query Frame = 1
Query:    1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYPA---------------RDDV-----------NYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYG----------GVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
            ++++VDAVA  S G+VPR+ +GLVTSR  V +LLKLD LIDLVIPRGS  LV +IK     P                 DDV           NYP+ACNA ET+L+H+   A  DS  C+     ++R LR AGV++ GGP A+  G++D   A+     EYG           +E+AI HIH +GS HTE +VTED A A++F++  D+ACVFHNASTR++DG+RFGLGAEV +
Sbjct:  474 HKVVVDAVAAASDGKVPREIVGLVTSRTQVSDLLKLDRLIDLVIPRGSKALVTNIKKNTRIPVLGHADGICHTYIDQHADDVKAAAIAVDGKINYPAACNATETVLIHQ---AKVDSGGCAT----VMRELRKAGVSLKGGPNAIAQGLIDMSCAAKSLSVEYGDLTCLVEVVANMEEAIAHIHEHGSSHTECIVTEDTATAEEFIKTTDAACVFHNASTRFADGFRFGLGAEVGI 702          
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: W7U194_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U194_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.080e-54
Identity = 111/236 (47.03%), Postives = 146/236 (61.86%), Query Frame = 1
Query:    1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYP----------------------ARDDVN----YPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYGGV----------EDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
            +R+I DA+   S+GRVP + IGLVT+R+ V  LL+LD +IDLVIPRGS  LV SIK+    P                      AR  V+    YP+ACNA ET+L+HR  +AD      +   + +LRAL  AGVTVLGGP A+K G+V    A+   + EYG +          E+AI HIH +GS HT+ ++TED   A++FL +VDSACVFHNAS+R++DGYRFGLGAEV +
Sbjct:  487 HRVITDAMTTASEGRVPAEAIGLVTTRSEVSALLELDDVIDLVIPRGSSALVRSIKSSTRIPVLGHAEGVCHIYVDKGADLRKAARIVVDAKTDYPAACNAVETLLLHRSFVADG-----AIGASKLLRALMSAGVTVLGGPEAVKEGLVSPGHAAKDLRQEYGDLTITVEVVADMEEAIAHIHKFGSSHTDAIITEDPVCAEEFLRSVDSACVFHNASSRFADGYRFGLGAEVGI 717          
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A0G4IMH3_PLABS (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IMH3_PLABS)

HSP 1 Score: 184 bits (466), Expect = 1.030e-50
Identity = 112/233 (48.07%), Postives = 137/233 (58.80%), Query Frame = 1
Query:   10 IVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYPA---RDDV-----------------------NYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYGG----------VEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
            IV+A+   S G VPRD + LV SR  +GELL+LD  IDLVIPRGS  LVN IK     P     D V                       +YP+ACN+AET+LVH   IA+    T       +L+ L  AGV +LGGP A++   +    A+P  KTEY            V+DAI H+H YGSGHTET+VTED  VA+QFL  VDSAC+FHNASTR+SDG+RFGLGAEV +
Sbjct:  471 IVEAIERSSNGAVPRDVLQLVESREDIGELLQLDDCIDLVIPRGSSDLVNFIKGNTRIPVLGHADGVCHVYVDQYADLSKADHILIDSKTSYPAACNSAETVLVHEALIANGGVNT-------VLQTLGKAGVKLLGGPRAVRQLHLP---AAPSLKTEYSDLAMSLEIVSDVDDAIAHVHKYGSGHTETIVTEDGDVAEQFLRQVDSACIFHNASTRFSDGFRFGLGAEVGI 693          
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: E1Z8M1_CHLVA (Glutamate-5-semialdehyde dehydrogenase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z8M1_CHLVA)

HSP 1 Score: 177 bits (450), Expect = 1.090e-50
Identity = 114/237 (48.10%), Postives = 144/237 (60.76%), Query Frame = 1
Query:    1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYP---------------ARDD-----------VNYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGP-AALKLGVVDKDKASPGFKTEY----------GGVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
            +++IVDAVAE + G V RD IGLVTSR  + ELLKL  +IDLVIPRGS +LV+ I+A    P               A D            V+YP+ACNA E ILVH   + ++ ++        +++AL+ AGVTV GG  AA  LG+      +P  + EY          GG+ +AI HIHT+GSGHTE +VTED+A A  FL  VDSACVFHNASTR+SDGYRFGLGAEV +
Sbjct:  136 HQLIVDAVAEVAPG-VGRDLIGLVTSRHEIDELLKLHDVIDLVIPRGSNQLVSYIQAHTKIPVLGHADGICHIYVDTAADPAKARRVCLDAKVDYPAACNAVEKILVHDSLVGEQLNS--------LVKALQDAGVTVHGGERAAAALGL----PPAPSVRHEYSSLDVTVELVGGLGEAIDHIHTHGSGHTECIVTEDQAAADDFLRRVDSACVFHNASTRFSDGYRFGLGAEVGI 359          
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A1W0A8G2_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8G2_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.280e-50
Identity = 108/237 (45.57%), Postives = 139/237 (58.65%), Query Frame = 1
Query:    1 NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYPARDDV--------------------------NYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYG-----------GVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
            +++I DA+   ++GRVPR  IGLVT+R  V ELLKLDH+IDL IPRGS  LV  IK     P                               +YP+ACNA ET+LV +  +        S A   I+ AL  AGV +L GP A  LGV+ + +A+P    EYG           GVE AI HI+ + SGHTE++VTED+ VA+QFL+ +DSACVFHNASTR++DG+RFGLGAEV +
Sbjct:  450 HKLIGDAIESETQGRVPRGVIGLVTTRDDVSELLKLDHVIDLCIPRGSNSLVTYIKKNTRIPVLGHAEGVCHMYIHSGANMEKAKSLVVDAKTDYPAACNALETLLVDKVHVD-------SGAIQSIIDALHDAGVKILVGPTAASLGVLPEAEAAPSLSHEYGAMALTLEVISGGVEKAIAHINAHSSGHTESIVTEDKNVAEQFLDGIDSACVFHNASTRFADGFRFGLGAEVGI 679          
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Match: A0A7S3HJX8_9STRA (Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJX8_9STRA)

HSP 1 Score: 180 bits (457), Expect = 2.030e-49
Identity = 104/234 (44.44%), Postives = 142/234 (60.68%), Query Frame = 1
Query:    7 IIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGKLVNSIKAWECYP--------------ARDDV------------NYPSACNAAETILVHRDCIADEDSATCSQARTHILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEY----------GGVEDAIRHIHTYGSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV 600
            I+ DA+ +GS+G+V  D + LVTSR  +  LLKLDH+IDLVIPRGS  LV+ IK     P              A  D+            +YPSACNA ET+L+H+  +        S A   +LRALR +GV + GGP A+K G+ +   A     TEY          G ++ A+ HI+TY SGHT+++VTE++A A+ F++++DSACVFHNASTR++DGYRFGLGAEV +
Sbjct:  459 IVADAIKDGSEGKVSTDVVSLVTSRNDIDSLLKLDHVIDLVIPRGSNALVSHIKNNTHIPVMGHADGVCHVYIDAEADLTKAERIVIDAKTDYPSACNAMETLLIHQKHVD-------SGAADKLLRALRASGVALFGGPEAVKQGLAEVPAAD--LHTEYSDLKLTVEVVGSLDAAMEHINTYSSGHTDSIVTENKASAELFIKSIDSACVFHNASTRFADGYRFGLGAEVGI 683          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10291.428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5M6_ECTSI2.230e-8570.48Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=E... [more]
A0A6H5JBC7_9PHAE5.170e-8063.03Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=E... [more]
A0A7S2UVN0_9STRA3.260e-6250.85Glutamate-5-semialdehyde dehydrogenase n=1 Tax=Fib... [more]
A0A835ZBW4_9STRA8.360e-5751.71Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=T... [more]
A0A7S2BH10_9STRA2.460e-5546.61Delta-1-pyrroline-5-carboxylate synthase n=2 Tax=D... [more]
W7U194_9STRA1.080e-5447.03Delta-1-pyrroline-5-carboxylate synthase n=2 Tax=M... [more]
A0A0G4IMH3_PLABS1.030e-5048.07Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=P... [more]
E1Z8M1_CHLVA1.090e-5048.10Glutamate-5-semialdehyde dehydrogenase n=1 Tax=Chl... [more]
A0A1W0A8G2_9STRA1.280e-5045.57Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=T... [more]
A0A7S3HJX8_9STRA2.030e-4944.44Delta-1-pyrroline-5-carboxylate synthase n=1 Tax=S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10291contigP-canaliculata_contig10291:502..3867 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score274.2
Seed ortholog evalue4.7e-71
Seed eggNOG ortholog2880.D7G5M6
Preferred nameALDH18A1
KEGG rclassRC00002,RC00043,RC00684
KEGG koko:K12657
KEGG ReactionR00239,R03313
KEGG Pathwayko00330,ko01100,ko01110,ko01230,map00330,map01100,map01110,map01230
KEGG ModuleM00015
GOsGO:0000003,GO:0000052,GO:0001101,GO:0003006,GO:0003674,GO:0003824,GO:0004349,GO:0004350,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005829,GO:0005911,GO:0006082,GO:0006520,GO:0006536,GO:0006560,GO:0006561,GO:0006591,GO:0006592,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0007275,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009266,GO:0009414,GO:0009415,GO:0009506,GO:0009507,GO:0009536,GO:0009555,GO:0009628,GO:0009651,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010035,GO:0010154,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016772,GO:0016774,GO:0016903,GO:0017084,GO:0018130,GO:0019202,GO:0019240,GO:0019752,GO:0019866,GO:0022414,GO:0022622,GO:0030054,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0042221,GO:0042538,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0048229,GO:0048316,GO:0048364,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0055044,GO:0055114,GO:0061458,GO:0071704,GO:0099402,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901700
EggNOG free text desc.glutamate-5-semialdehyde dehydrogenase activity
EggNOG OGsCOG0014@1,COG0263@1,KOG1154@2759,KOG4165@2759
EC1.2.1.41,2.7.2.11
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size609
Cds size609
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10291.428.1prot_P-canaliculata_contig10291.428.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig10291 502..3867 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815601.418794-CDS-P-canaliculata_contig10291:501..6991622815601.418794-CDS-P-canaliculata_contig10291:501..699Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10291 502..699 +
1693494160.0325494-CDS-P-canaliculata_contig10291:501..6991693494160.0325494-CDS-P-canaliculata_contig10291:501..699Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10291 502..699 +
1622815601.4308512-CDS-P-canaliculata_contig10291:2505..26071622815601.4308512-CDS-P-canaliculata_contig10291:2505..2607Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10291 2506..2607 +
1693494160.0454743-CDS-P-canaliculata_contig10291:2505..26071693494160.0454743-CDS-P-canaliculata_contig10291:2505..2607Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10291 2506..2607 +
1622815601.4430995-CDS-P-canaliculata_contig10291:3025..31391622815601.4430995-CDS-P-canaliculata_contig10291:3025..3139Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10291 3026..3139 +
1693494160.0564625-CDS-P-canaliculata_contig10291:3025..31391693494160.0564625-CDS-P-canaliculata_contig10291:3025..3139Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10291 3026..3139 +
1622815601.457531-CDS-P-canaliculata_contig10291:3672..38671622815601.457531-CDS-P-canaliculata_contig10291:3672..3867Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10291 3673..3867 +
1693494160.0655963-CDS-P-canaliculata_contig10291:3672..38671693494160.0655963-CDS-P-canaliculata_contig10291:3672..3867Pelvetia canaliculata dioeciousCDSP-canaliculata_contig10291 3673..3867 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig10291.428.1

>prot_P-canaliculata_contig10291.428.1 ID=prot_P-canaliculata_contig10291.428.1|Name=mRNA_P-canaliculata_contig10291.428.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=203bp
NRIIVDAVAEGSKGRVPRDCIGLVTSRAAVGELLKLDHLIDLVIPRGSGK
LVNSIKAWECYPARDDVNYPSACNAAETILVHRDCIADEDSATCSQARTH
ILRALRGAGVTVLGGPAALKLGVVDKDKASPGFKTEYGGVEDAIRHIHTY
GSGHTETVVTEDEAVAKQFLEAVDSACVFHNASTRYSDGYRFGLGAEVRV
CV*
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mRNA from alignment at P-canaliculata_contig10291:502..3867+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10291.428.1 ID=mRNA_P-canaliculata_contig10291.428.1|Name=mRNA_P-canaliculata_contig10291.428.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=3366bp|location=Sequence derived from alignment at P-canaliculata_contig10291:502..3867+ (Pelvetia canaliculata dioecious)
AACAGGATCATCGTGGACGCCGTGGCCGAGGGCTCGAAGGGTCGCGTTCC GCGGGACTGCATCGGGCTGGTCACGTCTCGGGCGGCGGTGGGAGAGCTCC TGAAGCTGGATCATCTCATCGATCTCGTCATCCCCCGAGGCTCTGGCAAG CTCGTCAACAGCATAAAGGCATGGGAATGTTACCCGGCACGGGATGATGT GGAGTTGAAATGAACTCTAGCACGGTATGGGATGAGATGGAACTATGGAA TGGGGGTGGGGGGGGCATGGTATGGGACATGGAATTGCGCGCGCATGGTC ATGAGGAAGCATGCAGGGGTGTGGTGGGATGGTTTGAAGATGGTGAGGTG GAATAGAAAACGGTAGGGTATGGGAAATAATGTTGTAGGAGGACGGCATG GGAAATGGGTCTACGACGGGATGGGATGGACAGTAATAATGATGCGGGAT GGGATGAGATGTCACGACGCTACACCCTCTCTACCCTCTTGGCGCCCATG GCGGTGCTAAATCATTACTCTGATACTATGGTATGGTATGGTGCACCGTA TGAAATGAAATTAGCTGCGTGAGAGCAGTGCCGCGTGAGATAGGGCATGT CGGGTTCCACCTAAGGGACGCACTTCAGCCAAACCGTCAGAATCTTTACC CAGCAAAGAAAGCCATTGACGACCACCCTCCTTTGCCCCTTCCACCCCCC GCGTCCGTTTGCCCGTGTTTTTCTCAGGCGTCCACGAAGATTCCTGTCAT GGGCCACAGCGAGGGCATCTGCCACGTGTACATCGACAAGGATGCCGATC CCTCCAAGGCGGTCGATATTACGGTGGACGCCAAGGTACAGTACACACGA GTCGTTCTGCTTTCTCCTGTTCGGTTTGAGCATGGTTTTGCTTCGGTTCG CTTTGGCTTTGGGCTGGGTTCGGCTCGGTTTTGTTCGGTTTTGCTTGCCC TCTCCCTCTCAGCGACTTTAATTGCTCATTAGCAATAGTGGTTCTTCGAC CTCAGCAGAGTCAGTAGTCGGTAGTGGTTCGTCGTTAGTAATGGTAATTT ATCGACCACAGCAGAGTCGTTAGTCGTTAGTCGTTAGTCGTTAGTCGTTA GTAATGGTGATTTATCGACCACAGCAGAGTCGTTAGCCGTTAGTCGTTAG TCGTTCGTCGTTAGTAATGGTGATTTATCGACCACAGCAGAGTCGTCAGT CGTTAGTCGTTAGTAATGGTGATTCCTCGTATAGAACTTGTGCGTCACAC AAAACTTAGCGAGAACTGCTCCCGAGGAGTCAGTCGGGCGATTAGTGAAC CAACCTTGTGGTTCTCTTGTGGGCATGATTCCATCTACTGTACTGGAACA CTTAGTTTGTTACCAGTACATATTATTTTGTACCAGTACATATTATATAC TGTACCGAAGTTTATCGATCGTCGAGGCTTGAGAAAGAGGGCTAGCTGGA CGATCGATCAACTTGTGAGTGACGAGTGGAGCCATAATCTTGCTTCCCGC GAGTGACGTCCTACCGTGCATTCTCGCTAAAACTGACGTCCGACGGTGCA CTCTTGGGAAAGTTCATTCGGAAACGGCTTCTAAGGCCAACAGTGCACTT AACCAGACTTATCCCAAAAAACTAGTTTAAGGCCAACGGTGCACTTATCA AGGCTATAATGATAGCGGGCCAAAGGTTCACTTAATGAAGCTACCGAGTA TTTGATAGCCGTTTTTAAGGCCGGCAGCTACTTTTGCATGTGCCACCGTA CTTGTAGTAGGTGAGAACCGCTTTACGTCCCAACTTTTTGCTTTTAAACT CAAAATGACGACTGACAACTGCTTACAAGCCCAGAGGGACACACTCAATT AATACCGTAAAGCTGCAAGGCTTTTCAGGAAACTCTTTGAAGAAGACCAA CGGTCCATTTCAAAAACGCTGTATTCGATAGGCTCTCTCAACATCGAGGG TTGCATACCGCGACCGTGCCTCCCTTTTTGTATGTACCGCCTTCCATGAT GTAGGTGAACTACCCTTCGGCGTGCAACGCGGCGGAAACGATCCTTGTAC ACAGAGACTGCATCGCCGACGAAGACTCGGCCACCTGTTCCCAGGCGAGA ACCCACGTAGCAGCCGCATGACGACGCCGACGCGCTGCTGCCGTTAACCT TACCTGACGACTCCGCAAGTTTCCCCCCATCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCGCCCCCCCCCCCCCCCCCTTTGTCCTCAGGTGNNNNNN NNNNCCCGCGGGCGCCCCCCTACGCCGCCCGCCCCCTGCCGCCGTTAACC CTTCCCGCCGCCCCCCCAAGTTTCCCCCCCCCCCCCCCCCCCCCCCCCAC AGCCACCGACGTTTCACTCACACGATTTTGTGAGTCGAAAGGTGTGCGCC AAGATTGAGATCGGGTGAAAAAGCAAGGATTTTTTTCTTCCTTTCTTTGT TTGCTTACCTTAAAACTTGTGTAAAGAGTGCTTCTGGCGGTGTGTATGTA TACTTTGTGTGTGCATGTTTTTAGATACTGAGGGCGCTGCGCGGCGCGGG GGTCACGGTGCTCGGCGGCCCTGCGGCGCTGAAGCTAGGCGTCGTGGACA AGGATAAGGCCTCGCCAGGCTTCAAGACCGAGTACGGTGTGTGTCATGAG GGTATTTGTCAAGTTGCACATGACGGGGCTTTCGCGTCTTTTTGTGTTGA TTTATATATATTTTTGTCAAACGTCATTTTTTCGCGACAGCACATGGGGA CATTGGCTGCATCTCACACGGTCGGTCTTTCCTTCAAGTGAGTTCCTTTT CACCTTGAAGTCGCGGGAGCCGAACAACCGGCCTCCTGTTGCCGAGATCA CGGTTGGTACGTTCTGCATCGTCCACTTTTTCAAATGTATTGTTTTCGGC GGCTTTCATTGACTTTACTACCCTCAAGCAGGAGCAACAATCCAACTCAA AAGTGACCAAACCCATGCTTGGGCGTACCAACTTTCATCAGCAACCGTTT TTTGTTAATGTTGCCATTTTTGTACCGAATACCGGTTTCCGAATCAATTC ACCCGTTTTCCGAGAGAGAAAGTGGGGGGAGGGGGGAGGGGGGGGCGATA TCTGAAAAGCCGACATCCGAACGCGGACCTTTGGTGCAGGCGACCTGACG GTGACTCTCGAGGTGGTGGAGGGCGTTGAGGACGCTATCCGTCACATTCA CACGTACGGTTCGGGTCACACGGAGACCGTGGTCACCGAGGACGAGGCGG TTGCGAAGCAGTTCCTGGAGGCTGTGGACAGCGCCTGCGTCTTCCACAAC GCCTCGACGCGTTACTCGGACGGCTACCGCTTCGGCCTGGGGGCGGAGGT GCGTGTATGTGTATGA
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Coding sequence (CDS) from alignment at P-canaliculata_contig10291:502..3867+

>mRNA_P-canaliculata_contig10291.428.1 ID=mRNA_P-canaliculata_contig10291.428.1|Name=mRNA_P-canaliculata_contig10291.428.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at P-canaliculata_contig10291:502..3867+ (Pelvetia canaliculata dioecious)
AACAGGATCATCGTGGACGCCGTGGCCGAGGGCTCGAAGGGTCGCGTTCC
GCGGGACTGCATCGGGCTGGTCACGTCTCGGGCGGCGGTGGGAGAGCTCC
TGAAGCTGGATCATCTCATCGATCTCGTCATCCCCCGAGGCTCTGGCAAG
CTCGTCAACAGCATAAAGGCATGGGAATGTTACCCGGCACGGGATGATAA
CAGGATCATCGTGGACGCCGTGGCCGAGGGCTCGAAGGGTCGCGTTCCGC
GGGACTGCATCGGGCTGGTCACGTCTCGGGCGGCGGTGGGAGAGCTCCTG
AAGCTGGATCATCTCATCGATCTCGTCATCCCCCGAGGCTCTGGCAAGCT
CGTCAACAGCATAAAGGCATGGGAATGTTACCCGGCACGGGATGATGTGA
ACTACCCTTCGGCGTGCAACGCGGCGGAAACGATCCTTGTACACAGAGAC
TGCATCGCCGACGAAGACTCGGCCACCTGTTCCCAGGCGAGAACCCACGT
GAACTACCCTTCGGCGTGCAACGCGGCGGAAACGATCCTTGTACACAGAG
ACTGCATCGCCGACGAAGACTCGGCCACCTGTTCCCAGGCGAGAACCCAC
ATACTGAGGGCGCTGCGCGGCGCGGGGGTCACGGTGCTCGGCGGCCCTGC
GGCGCTGAAGCTAGGCGTCGTGGACAAGGATAAGGCCTCGCCAGGCTTCA
AGACCGAGTACGGTATACTGAGGGCGCTGCGCGGCGCGGGGGTCACGGTG
CTCGGCGGCCCTGCGGCGCTGAAGCTAGGCGTCGTGGACAAGGATAAGGC
CTCGCCAGGCTTCAAGACCGAGTACGGTGGCGTTGAGGACGCTATCCGTC
ACATTCACACGTACGGTTCGGGTCACACGGAGACCGTGGTCACCGAGGAC
GAGGCGGTTGCGAAGCAGTTCCTGGAGGCTGTGGACAGCGCCTGCGTCTT
CCACAACGCCTCGACGCGTTACTCGGACGGCTACCGCTTCGGCCTGGGGG
CGGAGGTGCGTGTATGTGTATGAGGCGTTGAGGACGCTATCCGTCACATT
CACACGTACGGTTCGGGTCACACGGAGACCGTGGTCACCGAGGACGAGGC
GGTTGCGAAGCAGTTCCTGGAGGCTGTGGACAGCGCCTGCGTCTTCCACA
ACGCCTCGACGCGTTACTCGGACGGCTACCGCTTCGGCCTGGGGGCGGAG
GTGCGTGTATGTGTATGA
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